Example usage for java.lang Exception getLocalizedMessage

List of usage examples for java.lang Exception getLocalizedMessage

  1. HOME
  2. Java
  3. java
  4. java.lang.*
  5. Exception
  6. getLocalizedMessage

Introduction

In this page you can find the example usage for java.lang Exception getLocalizedMessage.

Prototype

public String getLocalizedMessage()

Source Link

Document

Creates a localized description of this throwable.

Usage

From source file:fr.sanofi.fcl4transmart.controllers.listeners.clinicalData.SetUnitsListener.java

@Override
public void handleEvent(Event event) {
    Vector<String> columns = this.setUnitsUI.getColumns();
    Vector<String> units = this.setUnitsUI.getUnits();
    if (columns.size() == 1) {
        if (columns.get(0).compareTo("") == 0 && columns.get(0).compareTo("") == 0) {
            columns = new Vector<String>();
            units = new Vector<String>();
        }// w  w  w .  j  a  v a  2  s . c o  m
    }
    for (int i = 0; i < columns.size(); i++) {
        if (columns.get(i).compareTo("") == 0 || units.get(i).compareTo("") == 0) {
            this.setUnitsUI.displayMessage("Some values are not set");
            return;
        }
        String columnFileName = columns.get(i).split(" - ", 2)[0];
        String unitFileName = units.get(i).split(" - ", 2)[0];
        if (columnFileName.compareTo(unitFileName) != 0) {
            this.setUnitsUI.displayMessage("Columns for value and unit have to been from the same file");
        }
    }
    if (((ClinicalData) this.dataType).getCMF() == null) {
        this.setUnitsUI.displayMessage("Error: no column mapping file");
        return;
    }
    if (!this.checkValues(columns, units))
        return;
    File file = new File(this.dataType.getPath().toString() + File.separator
            + this.dataType.getStudy().toString() + ".columns.tmp");
    try {
        FileWriter fw = new FileWriter(file);
        BufferedWriter out = new BufferedWriter(fw);
        out.write(
                "Filename\tCategory Code\tColumn Number\tData Label\tData Label Source\tControlled Vocab Code\n");
        try {
            BufferedReader br = new BufferedReader(new FileReader(((ClinicalData) this.dataType).getCMF()));
            String line = br.readLine();
            while ((line = br.readLine()) != null) {
                if (line.split("\t", -1)[3].compareTo("UNITS") != 0) {
                    out.write(line + "\n");
                }
            }
            br.close();
        } catch (Exception e) {
            this.setUnitsUI.displayMessage("Error: " + e.getLocalizedMessage());
            e.printStackTrace();
            out.close();
        }
        for (int i = 0; i < columns.size(); i++) {
            String fileName = columns.get(i).split(" - ", 2)[0];
            int columnColumnNumber = -1;
            for (File rawFile : ((ClinicalData) this.dataType).getRawFiles()) {
                if (rawFile.getName().compareTo(fileName) == 0) {
                    columnColumnNumber = FileHandler.getHeaderNumber(rawFile,
                            columns.get(i).split(" - ", 2)[1]);
                }
            }
            int unitColumnNumber = -1;
            for (File rawFile : ((ClinicalData) this.dataType).getRawFiles()) {
                if (rawFile.getName().compareTo(fileName) == 0) {
                    unitColumnNumber = FileHandler.getHeaderNumber(rawFile, units.get(i).split(" - ", 2)[1]);
                }
            }
            if (columnColumnNumber != -1 && unitColumnNumber != -1) {
                out.write(fileName + "\t\t" + String.valueOf(unitColumnNumber) + "\tUNITS\t"
                        + String.valueOf(columnColumnNumber) + "\t\t\n");

            }
        }

        out.close();
        String fileName = ((ClinicalData) this.dataType).getCMF().getName();
        FileUtils.deleteQuietly(((ClinicalData) this.dataType).getCMF());
        try {
            File fileDest = new File(this.dataType.getPath() + File.separator + fileName);
            FileUtils.moveFile(file, fileDest);
            ((ClinicalData) this.dataType).setCMF(fileDest);
        } catch (Exception ioe) {
            this.setUnitsUI.displayMessage("File error: " + ioe.getLocalizedMessage());
            return;
        }
    } catch (Exception e) {
        this.setUnitsUI.displayMessage("Error: " + e.getLocalizedMessage());
        e.printStackTrace();
    }
    this.setUnitsUI.displayMessage("Column mapping file updated");
    WorkPart.updateSteps();
    WorkPart.updateFiles();
}

From source file:com.marpies.ane.vk.functions.RequestFunction.java

private String parseRequestParameters(FREArray params, VKParameters vkParameters) {
    if (params != null) {
        try {/*  w ww .  j ava 2s. c o m*/
            long length = params.getLength();
            String key = null;
            for (long i = 0; i < length; i++) {
                FREObject param = params.getObjectAt(i);
                /* Get key */
                if (i % 2 == 0) {
                    key = FREObjectUtils.getString(param);
                }
                /* Get value */
                else {
                    Object value = null;
                    FREObjectType type = getFREObjectType(param);
                    switch (type) {
                    case INT:
                        value = FREObjectUtils.getInt(param);
                        AIR.log("FREObjectType: INT = " + FREObjectUtils.getInt(param));
                        break;
                    case DOUBLE:
                        value = FREObjectUtils.getDouble(param);
                        AIR.log("FREObjectType: DOUBLE = " + FREObjectUtils.getDouble(param));
                        break;
                    case STRING:
                        value = FREObjectUtils.getString(param);
                        AIR.log("FREObjectType: STRING = " + FREObjectUtils.getString(param));
                        break;
                    case ARRAY:
                        value = FREObjectUtils.getListOfString((FREArray) param);
                        AIR.log("FREObjectType: ARRAY = " + FREObjectUtils.getListOfString((FREArray) param));
                        break;
                    case UNKNOWN:
                        throw new Exception("Parameter value for key " + key + " cannot be evaluated.");
                    }
                    if (value != null) {
                        vkParameters.put(key, value);
                    }
                }
            }
        } catch (Exception e) {
            e.printStackTrace();
            return e.getLocalizedMessage();
        }
    }
    /* No error message */
    return null;
}

From source file:gov.va.isaac.search.CompositeSearchResultComparator.java

/**
 * Note, the primary getBestScore() sort is in reverse, so it goes highest to lowest
 *
 * @see java.util.Comparator#compare(java.lang.Object, java.lang.Object)
 *//*from   ww w .j  av  a 2 s  .co  m*/
@Override
public int compare(CompositeSearchResult o1, CompositeSearchResult o2) {
    if (o1.getBestScore() < o2.getBestScore()) {
        return 1;
    } else if (o1.getBestScore() > o2.getBestScore()) {
        return -1;
    }

    if (o1.getContainingConcept() == null || o2.getContainingConcept() == null) {
        if (o1.getContainingConcept() == null && o2.getContainingConcept() != null) {
            return 1;
        } else if (o1.getContainingConcept() != null && o2.getContainingConcept() == null) {
            return -1;
        } else {
            return 0;
        }
    }
    // else same score
    String o1FSN = null;
    try {
        o1FSN = o1.getContainingConcept().getFullySpecifiedDescription().getText().trim();
    } catch (Exception e) {
        LOG.warn("Failed calling getFullySpecifiedDescription() (" + e.getClass().getName() + " \""
                + e.getLocalizedMessage() + "\") on concept " + o1, e);
    }
    String o2FSN = null;
    try {
        o2FSN = o2.getContainingConcept().getFullySpecifiedDescription().getText().trim();
    } catch (Exception e) {
        LOG.warn("Failed calling getFullySpecifiedDescription() (" + e.getClass().getName() + " \""
                + e.getLocalizedMessage() + "\") on concept " + o2, e);
    }

    int fsnComparison = ObjectUtils.compare(o1FSN, o2FSN);
    if (fsnComparison != 0) {
        return fsnComparison;
    }

    // else same score and FSN
    String o1PreferredDescription = null;
    try {
        o1PreferredDescription = o1.getContainingConcept().getPreferredDescription().getText().trim();
    } catch (Exception e) {
        LOG.debug("Failed calling getPreferredDescription() (" + e.getClass().getName() + " \""
                + e.getLocalizedMessage() + "\") on concept " + o1, e);
    }

    String o2PreferredDescription = null;
    try {
        o2PreferredDescription = o2.getContainingConcept().getPreferredDescription().getText().trim();
    } catch (Exception e) {
        LOG.debug("Failed calling getPreferredDescription() (" + e.getClass().getName() + " \""
                + e.getLocalizedMessage() + "\") on concept " + o2, e);
    }

    int prefDescComparison = ObjectUtils.compare(o1PreferredDescription, o2PreferredDescription);
    if (prefDescComparison != 0) {
        return prefDescComparison;
    }

    // else same score and FSN and preferred description - sort on type
    String comp1String = o1.getMatchingComponents().iterator().next().toUserString();
    String comp2String = o2.getMatchingComponents().iterator().next().toUserString();

    return ObjectUtils.compare(comp1String, comp2String);
}

From source file:com.cclife.registration.dao.FamilyJPADaoImpl.java

/**
 *
 * @param obj//from w ww . ja  v a 2  s . c o  m
 * @throws PreexistingEntityException
 * @throws RollbackFailureException
 * @throws Exception
 */
@Transactional
@Override
public void create(Family obj) throws PreexistingEntityException, RollbackFailureException, Exception {
    try {
        //            em.persist(obj);

        if (obj.getFamilyID() == null) {

            em.persist(obj);
        } else {
            if (!em.contains(obj)) {
                em.merge(obj);
            }
        }
    } catch (Exception ex) {
        logger.error("Create Family ERROR:" + ex.getLocalizedMessage());
        if (find(obj.getFamilyID()) != null) {
            throw new PreexistingEntityException("Family " + obj + " already exists.", ex);
        }
        throw ex;
    }
}

From source file:at.bitfire.davdroid.webdav.WebDavCollection.java

public boolean multiGet(String[] names, MultigetType type)
        throws IOException, IncapableResourceException, HttpException {
    DavMultiget multiget = (type == MultigetType.ADDRESS_BOOK) ? new DavAddressbookMultiget()
            : new DavCalendarMultiget();

    multiget.prop = new DavProp();
    multiget.prop.getetag = new DavProp.DavPropGetETag();

    if (type == MultigetType.ADDRESS_BOOK)
        multiget.prop.addressData = new DavProp.DavPropAddressData();
    else if (type == MultigetType.CALENDAR)
        multiget.prop.calendarData = new DavProp.DavPropCalendarData();

    multiget.hrefs = new ArrayList<DavHref>(names.length);
    for (String name : names)
        multiget.hrefs.add(new DavHref(location.resolve(name).getPath()));

    Serializer serializer = new Persister();
    StringWriter writer = new StringWriter();
    try {/*from www. jav a2  s .c om*/
        serializer.write(multiget, writer);
    } catch (Exception e) {
        Log.e(TAG, e.getLocalizedMessage());
        return false;
    }

    HttpReport report = new HttpReport(location, writer.toString());
    HttpResponse response = client.execute(report);
    checkResponse(response);

    if (response.getStatusLine().getStatusCode() == HttpStatus.SC_MULTI_STATUS) {
        DavMultistatus multistatus;
        try {
            ByteArrayOutputStream baos = new ByteArrayOutputStream();
            InputStream is = new TeeInputStream(response.getEntity().getContent(), baos);
            multistatus = serializer.read(DavMultistatus.class, is);

            Log.d(TAG, "Received multistatus response: " + baos.toString("UTF-8"));
        } catch (Exception e) {
            Log.e(TAG, e.getLocalizedMessage());
            return false;
        }
        processMultiStatus(multistatus);

    } else
        throw new IncapableResourceException();
    return true;
}

From source file:org.miloss.fgsms.presentation.StatusHelper.java

/**
 * determines if an fgsms service is currently accessible. not for use
 * with other services.//  w  w  w .  j  ava2 s .c om
 *
 * @param endpoint
 * @return
 */
public String sendGetRequest(String endpoint) {
    //   String result = null;
    if (endpoint.startsWith("http")) {
        // Send a GET request to the servlet
        try {

            URL url = new URL(endpoint);
            int port = url.getPort();
            if (port <= 0) {
                if (endpoint.startsWith("https:")) {
                    port = 443;
                } else {
                    port = 80;
                }
            }

            HttpClientBuilder create = HttpClients.custom();

            if (mode == org.miloss.fgsms.common.Constants.AuthMode.UsernamePassword) {
                CredentialsProvider credsProvider = new BasicCredentialsProvider();
                credsProvider.setCredentials(new AuthScope(url.getHost(), port),
                        new UsernamePasswordCredentials(username, Utility.DE(password)));
                create.setDefaultCredentialsProvider(credsProvider);
                ;

            }
            CloseableHttpClient c = create.build();

            CloseableHttpResponse response = c.execute(new HttpHost(url.getHost(), port),
                    new HttpGet(endpoint));

            c.close();
            int status = response.getStatusLine().getStatusCode();
            if (status == 200) {
                return "OK";
            }
            return String.valueOf(status);

        } catch (Exception ex) {
            Logger.getLogger(Helper.class).log(Level.WARN,
                    "error fetching http doc from " + endpoint + ex.getLocalizedMessage());
            return "offline";
        }
    } else {
        return "undeterminable";
    }
}

From source file:fr.sanofi.fcl4transmart.controllers.listeners.clinicalData.SelectClinicalRawFileListener.java

public boolean checkTabFormat(File rawFile) {
    try {/*from ww  w.  j  av a2s .co  m*/
        BufferedReader br = new BufferedReader(new FileReader(rawFile));
        String line = br.readLine();
        int columnsNbr = line.split("\t", -1).length;
        while ((line = br.readLine()) != null) {
            if (line.compareTo("") != 0) {
                if (line.split("\t", -1).length != columnsNbr) {
                    selectRawFilesUI.setMessage("Wrong file format:\nLines have no the same number of columns");
                    selectRawFilesUI.setIsLoading(false);
                    br.close();
                    return false;
                }
            }
        }
        br.close();
    } catch (Exception e) {
        selectRawFilesUI.setMessage("File error: " + e.getLocalizedMessage());
        e.printStackTrace();
        return false;
    }
    return true;
}

From source file:fr.sanofi.fcl4transmart.controllers.listeners.geneExpression.SelectSTSMFListener.java

public boolean checkFormat(File file) {
    try {//ww w .j ava  2 s  .  c  om
        BufferedReader br = new BufferedReader(new FileReader(file));
        String line = br.readLine();
        Vector<String> samples = FileHandler.getSamplesId(((GeneExpressionData) this.dataType).getRawFile());
        Vector<String> samplesSTSMF = new Vector<String>();
        String category = "";
        while ((line = br.readLine()) != null) {
            if (line.compareTo("") != 0) {
                String[] fields = line.split("\t", -1);
                //check columns number
                if (fields.length != 9) {
                    this.selectSTSMFUI.displayMessage("Error:\nLines have not the right number of columns");
                    br.close();
                    return false;
                }
                //check that study id is set
                if (fields[0].compareTo("") == 0) {
                    this.selectSTSMFUI.displayMessage("Error:\nStudy identifiers have to be set");
                    br.close();
                    return false;
                }
                //check that subject id is set
                if (fields[3].compareTo("") == 0) {
                    this.selectSTSMFUI.displayMessage("Error:\nSubjects identifiers have to be set");
                    br.close();
                    return false;
                }
                //check that samples id is set
                if (fields[4].compareTo("") == 0) {
                    this.selectSTSMFUI.displayMessage("Error:\nSamples identifiers have to be set");
                    br.close();
                    return false;
                }
                //check that platform is set
                if (fields[5].compareTo("") == 0) {
                    this.selectSTSMFUI.displayMessage("Error:\nPlatform has to be set");
                    br.close();
                    return false;
                }
                //check that tissue type is set
                if (fields[5].compareTo("") == 0) {
                    this.selectSTSMFUI.displayMessage("Error:\nTissue type has to be set");
                    br.close();
                    return false;
                }
                //check that category codes are set
                if (fields[8].compareTo("") == 0) {
                    this.selectSTSMFUI.displayMessage("Error:\nCategory codes have to be set");
                    br.close();
                    return false;
                }
                if (category.compareTo("") == 0) {
                    category = fields[8];
                } else {
                    if (fields[8].compareTo(category) != 0) {
                        this.selectSTSMFUI.displayMessage("Category code has to be always the same");
                        br.close();
                        return false;
                    }
                }
                if (!samplesSTSMF.contains(fields[3])) {
                    if (samples.contains(fields[3])) {
                        samplesSTSMF.add(fields[3]);
                    }
                }
            }
        }
        if (samplesSTSMF.size() != samples.size()) {
            this.selectSTSMFUI
                    .displayMessage("Error:\nSample identifiers are not the same than in raw data file");
            br.close();
            return false;
        }
        br.close();
    } catch (Exception e) {
        selectSTSMFUI.displayMessage("Error: " + e.getLocalizedMessage());
        e.printStackTrace();
        return false;
    }
    return true;
}

From source file:com.qperior.GSAOneBoxProvider.QPOneBoxProviderServletTest.java

/**
 * //from  w w w  .j  a  v  a 2  s .c  o  m
 */
@Test
public void testDoGetHttpServletRequestHttpServletResponse() {

    String uri = URI_SERVLET + URI_APIMAJ + URI_AMP + URI_APIMIN + URI_AMP + URI_AUTHTYPE + URI_AMP + URI_LANG
            + URI_AMP + URI_ONEBOXNAME + URI_AMP + URI_QUERY;

    try {
        String actual = this.callHttpGet(uri);
        assertEquals(null,
                "<?xml version=\"1.0\" encoding=\"UTF-8\"?><OneBoxResults xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\" xsi:noNamespaceSchemaLocation=\"oneboxresults.xsd\"><resultCode>lookupFailure</resultCode><Diagnostics>Empty result.</Diagnostics><provider>Dummy Provider (none)</provider></OneBoxResults>",
                actual);
    } catch (Exception exc) {
        fail("Exception in DoGet: " + exc.getLocalizedMessage());
    }

    String uri2 = URI_SERVLET + URI_APIMIN + URI_AMP + URI_AUTHTYPE + URI_AMP + URI_LANG + URI_AMP
            + URI_ONEBOXNAME + URI_AMP + URI_QUERY;

    try {
        String actual = this.callHttpGet(uri2);
        assertEquals(null,
                "<?xml version=\"1.0\" encoding=\"UTF-8\"?><OneBoxResults xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\" xsi:noNamespaceSchemaLocation=\"oneboxresults.xsd\"><resultCode>securityFailure</resultCode><Diagnostics>QPRequestValidateException: Request parameter (Integer) 'apiMaj' not send or in wrong format.</Diagnostics><provider>Provider not initialized.</provider></OneBoxResults>",
                actual);
    } catch (Exception exc) {
        fail("Exception in DoGet: " + exc.getLocalizedMessage());
    }

    String uri3 = URI_SERVLET + URI_APIMAJ + URI_AMP + URI_AUTHTYPE + URI_AMP + URI_LANG + URI_AMP
            + URI_ONEBOXNAME + URI_AMP + URI_QUERY;

    try {
        String actual = this.callHttpGet(uri3);
        assertEquals(null,
                "<?xml version=\"1.0\" encoding=\"UTF-8\"?><OneBoxResults xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\" xsi:noNamespaceSchemaLocation=\"oneboxresults.xsd\"><resultCode>securityFailure</resultCode><Diagnostics>QPRequestValidateException: Request parameter (Integer) 'apiMin' not send or in wrong format.</Diagnostics><provider>Provider not initialized.</provider></OneBoxResults>",
                actual);
    } catch (Exception exc) {
        fail("Exception in DoGet: " + exc.getLocalizedMessage());
    }

    String uri4 = URI_SERVLET + URI_APIMAJ + URI_AMP + URI_APIMIN + URI_AMP + URI_LANG + URI_AMP
            + URI_ONEBOXNAME + URI_AMP + URI_QUERY;

    try {
        String actual = this.callHttpGet(uri4);
        assertEquals(null,
                "<?xml version=\"1.0\" encoding=\"UTF-8\"?><OneBoxResults xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\" xsi:noNamespaceSchemaLocation=\"oneboxresults.xsd\"><resultCode>securityFailure</resultCode><Diagnostics>QPRequestValidateException: Request parameter (QPAuthType) 'authType' not send or in wrong format.</Diagnostics><provider>Provider not initialized.</provider></OneBoxResults>",
                actual);
    } catch (Exception exc) {
        fail("Exception in DoGet: " + exc.getLocalizedMessage());
    }

    String uri5 = URI_SERVLET + URI_APIMAJ + URI_AMP + URI_APIMIN + URI_AMP + URI_AUTHTYPE + URI_AMP
            + URI_ONEBOXNAME + URI_AMP + URI_QUERY;

    try {
        String actual = this.callHttpGet(uri5);
        assertEquals(null,
                "<?xml version=\"1.0\" encoding=\"UTF-8\"?><OneBoxResults xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\" xsi:noNamespaceSchemaLocation=\"oneboxresults.xsd\"><resultCode>securityFailure</resultCode><Diagnostics>QPRequestValidateException: Request parameter (String) 'lang' not send or in wrong format.</Diagnostics><provider>Provider not initialized.</provider></OneBoxResults>",
                actual);
    } catch (Exception exc) {
        fail("Exception in DoGet: " + exc.getLocalizedMessage());
    }

    String uri6 = URI_SERVLET + URI_APIMAJ + URI_AMP + URI_APIMIN + URI_AMP + URI_AUTHTYPE + URI_AMP + URI_LANG
            + URI_AMP + URI_QUERY;

    try {
        String actual = this.callHttpGet(uri6);
        assertEquals(null,
                "<?xml version=\"1.0\" encoding=\"UTF-8\"?><OneBoxResults xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\" xsi:noNamespaceSchemaLocation=\"oneboxresults.xsd\"><resultCode>securityFailure</resultCode><Diagnostics>QPRequestValidateException: Request parameter (String) 'oneboxName' not send or in wrong format.</Diagnostics><provider>Provider not initialized.</provider></OneBoxResults>",
                actual);
    } catch (Exception exc) {
        fail("Exception in DoGet: " + exc.getLocalizedMessage());
    }

    String uri7 = URI_SERVLET + URI_APIMAJ + URI_AMP + URI_APIMIN + URI_AMP + URI_AUTHTYPE + URI_AMP + URI_LANG
            + URI_AMP + URI_ONEBOXNAME + URI_AMP;

    try {
        String actual = this.callHttpGet(uri7);
        assertEquals(null,
                "<?xml version=\"1.0\" encoding=\"UTF-8\"?><OneBoxResults xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\" xsi:noNamespaceSchemaLocation=\"oneboxresults.xsd\"><resultCode>securityFailure</resultCode><Diagnostics>QPRequestValidateException: Request parameter (String) 'query' not send or in wrong format.</Diagnostics><provider>Provider not initialized.</provider></OneBoxResults>",
                actual);
    } catch (Exception exc) {
        fail("Exception in DoGet: " + exc.getLocalizedMessage());
    }
}

From source file:uk.ac.ebi.emma.controller.BiblioManagementListController.java

/**
 * Deletes the biblio identified by <b>id</b>. This method is configured as
 * a GET because it is intended to be called as an ajax call. Using GET
 * avoids re-posting problems with the back button. NOTE: It is the caller's
 * responsibility to insure there are no foreign key constraints.
 * /*from w  w w. j a v  a  2s. c om*/
 * @param biblio_key primary key of the biblio to be deleted
 * @return a JSON string containing 'status' [ok or fail], and a message [
 * empty string if status is ok; error message otherwise]
 */
@RequestMapping(value = "/deleteBiblio", method = RequestMethod.GET)
@ResponseBody
public ResponseEntity<String> deleteBiblio(@RequestParam int biblio_key) {
    String status, message;

    try {
        bibliosManager.delete(biblio_key);
        status = "ok";
        message = "";
    } catch (Exception e) {
        status = "fail";
        message = e.getLocalizedMessage();
    }

    JSONObject returnStatus = new JSONObject();
    returnStatus.put("status", status);
    returnStatus.put("message", message);
    HttpHeaders headers = new HttpHeaders();
    headers.add("Content-Type", "application/json; charset=utf-8");

    return new ResponseEntity(returnStatus.toJSONString(), headers, HttpStatus.OK);
}