Example usage for org.apache.commons.lang StringUtils countMatches

List of usage examples for org.apache.commons.lang StringUtils countMatches

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Introduction

In this page you can find the example usage for org.apache.commons.lang StringUtils countMatches.

Prototype

public static int countMatches(String str, String sub)

Source Link

Document

Counts how many times the substring appears in the larger String.

Usage

From source file:org.gradle.api.internal.plugins.StartScriptTemplateBindingFactory.java

String createJoinedAppHomeRelativePath(String scriptRelPath) {
    int depth = StringUtils.countMatches(scriptRelPath, "/");
    if (depth == 0) {
        return "";
    }/*from w w  w .  jav  a2s . c o m*/

    List<String> appHomeRelativePath = new ArrayList<String>(depth);
    for (int i = 0; i < depth; i++) {
        appHomeRelativePath.add("..");
    }

    return Joiner.on(windows ? "\\" : "/").join(appHomeRelativePath);
}

From source file:org.hupo.psi.mi.psicquic.ws.IndexBasedPsicquicRestServiceTest.java

@Test
public void testGetByQuery_biopax() throws Exception {
    ResponseImpl response = (ResponseImpl) service.getByQuery("FANCD1", "biopax", "0", "5", "n");

    final String output = ((GenericEntity<String>) response.getEntity()).getEntity();
    Assert.assertEquals(5, StringUtils.countMatches(output, "<j.0:MolecularInteraction "));
}

From source file:org.intermine.api.lucene.KeywordSearch.java

@SuppressWarnings("unchecked")
private static synchronized void parseProperties(ObjectStore os) {
    if (properties != null) {
        return;/*from w ww. j a  va 2s.co m*/
    }

    specialReferences = new HashMap<Class<? extends InterMineObject>, String[]>();
    ignoredClasses = new HashSet<Class<? extends InterMineObject>>();
    classBoost = new HashMap<ClassDescriptor, Float>();
    ignoredFields = new HashMap<Class<? extends InterMineObject>, Set<String>>();
    facets = new Vector<KeywordSearchFacetData>();
    debugOutput = true;

    // load config file to figure out special classes
    String configFileName = "keyword_search.properties";
    ClassLoader classLoader = KeywordSearch.class.getClassLoader();
    InputStream configStream = classLoader.getResourceAsStream(configFileName);
    if (configStream != null) {
        properties = new Properties();
        try {
            properties.load(configStream);

            for (Map.Entry<Object, Object> entry : properties.entrySet()) {
                String key = (String) entry.getKey();
                String value = ((String) entry.getValue()).trim();

                if ("index.ignore".equals(key) && !StringUtils.isBlank(value)) {
                    String[] ignoreClassNames = value.split("\\s+");

                    for (String className : ignoreClassNames) {
                        ClassDescriptor cld = os.getModel().getClassDescriptorByName(className);

                        if (cld == null) {
                            LOG.error("Unknown class in config file: " + className);
                        } else {
                            addCldToIgnored(ignoredClasses, cld);
                        }
                    }
                } else if ("index.ignore.fields".equals(key) && !StringUtils.isBlank(value)) {
                    String[] ignoredPaths = value.split("\\s+");

                    for (String ignoredPath : ignoredPaths) {
                        if (StringUtils.countMatches(ignoredPath, ".") != 1) {
                            LOG.error("Fields to ignore specified by 'index.ignore.fields'"
                                    + " should contain Class.field, e.g. Company.name");
                        } else {
                            String clsName = ignoredPath.split("\\.")[0];
                            String fieldName = ignoredPath.split("\\.")[1];

                            ClassDescriptor cld = os.getModel().getClassDescriptorByName(clsName);
                            if (cld != null) {
                                FieldDescriptor fld = cld.getFieldDescriptorByName(fieldName);
                                if (fld != null) {
                                    addToIgnoredFields(ignoredFields, cld, fieldName);
                                } else {
                                    LOG.error("Field name '" + fieldName + "' not found for" + " class '"
                                            + clsName + "' specified in" + "'index.ignore.fields'");
                                }
                            } else {
                                LOG.error("Class name specified in 'index.ignore.fields'" + " not found: "
                                        + clsName);
                            }
                        }
                    }
                } else if (key.startsWith("index.references.")) {
                    String classToIndex = key.substring("index.references.".length());
                    ClassDescriptor cld = os.getModel().getClassDescriptorByName(classToIndex);
                    if (cld != null) {
                        Class<? extends InterMineObject> cls = (Class<? extends InterMineObject>) cld.getType();

                        // special fields (references to follow) come as
                        // a
                        // space-separated list
                        String[] specialFields;
                        if (!StringUtils.isBlank(value)) {
                            specialFields = value.split("\\s+");
                        } else {
                            specialFields = null;
                        }

                        specialReferences.put(cls, specialFields);
                    } else {
                        LOG.error("keyword_search.properties: classDescriptor for '" + classToIndex
                                + "' not found!");
                    }
                } else if (key.startsWith("index.facet.single.")) {
                    String facetName = key.substring("index.facet.single.".length());
                    String facetField = value;
                    facets.add(
                            new KeywordSearchFacetData(facetField, facetName, KeywordSearchFacetType.SINGLE));
                } else if (key.startsWith("index.facet.multi.")) {
                    String facetName = key.substring("index.facet.multi.".length());
                    String facetField = value;
                    facets.add(new KeywordSearchFacetData(facetField, facetName, KeywordSearchFacetType.MULTI));
                } else if (key.startsWith("index.facet.path.")) {
                    String facetName = key.substring("index.facet.path.".length());
                    String[] facetFields = value.split(" ");
                    facets.add(new KeywordSearchFacetData(facetFields, facetName, KeywordSearchFacetType.PATH));
                } else if (key.startsWith("index.boost.")) {
                    String classToBoost = key.substring("index.boost.".length());
                    ClassDescriptor cld = os.getModel().getClassDescriptorByName(classToBoost);
                    if (cld != null) {
                        classBoost.put(cld, Float.valueOf(value));
                    } else {
                        LOG.error("keyword_search.properties: classDescriptor for '" + classToBoost
                                + "' not found!");
                    }
                } else if (key.startsWith("index.prefix")) {
                    String classAndAttribute = key.substring("index.prefix.".length());
                    addAttributePrefix(classAndAttribute, value);
                } else if ("search.debug".equals(key) && !StringUtils.isBlank(value)) {
                    debugOutput = "1".equals(value) || "true".equals(value.toLowerCase())
                            || "on".equals(value.toLowerCase());
                }

                tempDirectory = properties.getProperty("index.temp.directory", "");
            }
        } catch (IOException e) {
            LOG.error("keyword_search.properties: errow while loading file '" + configFileName + "'", e);
        }
    } else {
        LOG.error("keyword_search.properties: file '" + configFileName + "' not found!");
    }

    LOG.debug("Indexing - Ignored classes:");
    for (Class<? extends InterMineObject> class1 : ignoredClasses) {
        LOG.debug("- " + class1.getSimpleName());
    }

    LOG.debug("Indexing - Special References:");
    for (Entry<Class<? extends InterMineObject>, String[]> specialReference : specialReferences.entrySet()) {
        LOG.debug("- " + specialReference.getKey() + " = " + Arrays.toString(specialReference.getValue()));
    }

    LOG.debug("Indexing - Facets:");
    for (KeywordSearchFacetData facet : facets) {
        LOG.debug("- field = " + facet.getField() + ", name = " + facet.getName() + ", type = "
                + facet.getType().toString());
    }

    LOG.debug("Indexing with and without attribute prefixes:");
    if (attributePrefixes != null) {
        for (String clsAndAttribute : attributePrefixes.keySet()) {
            LOG.debug("- class and attribute: " + clsAndAttribute + " with prefix: "
                    + attributePrefixes.get(clsAndAttribute));
        }
    }

    LOG.info("Search - Debug mode: " + debugOutput);
    LOG.info("Indexing - Temp Dir: " + tempDirectory);
}

From source file:org.intermine.api.searchengine.KeywordSearchPropertiesManager.java

private synchronized void parseProperties(ObjectStore os) {
    if (properties != null) {
        return;/*from  w  w w .  j  a  va  2 s  . c om*/
    }

    //read class keys to figure out what are keyFields during indexing
    Properties classKeyProperties = new Properties();
    try {
        classKeyProperties.load(getClass().getClassLoader().getResourceAsStream(CLASS_KEYS_FILE_NAME));
    } catch (IOException e) {
        throw new BuildException("Could not open the class keys");
    } catch (NullPointerException e) {
        throw new BuildException("Could not find the class keys");
    }
    classKeys = ClassKeyHelper.readKeys(os.getModel(), classKeyProperties);

    specialReferences = new HashMap<Class<? extends InterMineObject>, String[]>();
    ignoredClasses = new HashSet<Class<? extends InterMineObject>>();
    classBoost = new HashMap<ClassDescriptor, Float>();
    ignoredFields = new HashMap<Class<? extends InterMineObject>, Set<String>>();
    facets = new Vector<KeywordSearchFacetData>();
    debugOutput = true;

    // load config file to figure out special classes
    String configFileName = CONFIG_FILE_NAME;
    ClassLoader classLoader = KeywordSearchPropertiesManager.class.getClassLoader();
    InputStream configStream = classLoader.getResourceAsStream(configFileName);
    if (configStream != null) {
        properties = new Properties();
        try {
            properties.load(configStream);

            for (Map.Entry<Object, Object> entry : properties.entrySet()) {
                String key = (String) entry.getKey();
                String value = ((String) entry.getValue()).trim();

                if ("index.ignore".equals(key) && !StringUtils.isBlank(value)) {
                    String[] ignoreClassNames = value.split("\\s+");

                    for (String className : ignoreClassNames) {
                        ClassDescriptor cld = os.getModel().getClassDescriptorByName(className);

                        if (cld == null) {
                            LOG.error("Unknown class in config file: " + className);
                        } else {
                            addCldToIgnored(ignoredClasses, cld);
                        }
                    }
                } else if ("index.ignore.fields".equals(key) && !StringUtils.isBlank(value)) {
                    String[] ignoredPaths = value.split("\\s+");

                    for (String ignoredPath : ignoredPaths) {
                        if (StringUtils.countMatches(ignoredPath, ".") != 1) {
                            LOG.error("Fields to ignore specified by 'index.ignore.fields'"
                                    + " should contain Class.field, e.g. Company.name");
                        } else {
                            String clsName = ignoredPath.split("\\.")[0];
                            String fieldName = ignoredPath.split("\\.")[1];

                            ClassDescriptor cld = os.getModel().getClassDescriptorByName(clsName);
                            if (cld != null) {
                                FieldDescriptor fld = cld.getFieldDescriptorByName(fieldName);
                                if (fld != null) {
                                    addToIgnoredFields(ignoredFields, cld, fieldName);
                                } else {
                                    LOG.error("Field name '" + fieldName + "' not found for" + " class '"
                                            + clsName + "' specified in" + "'index.ignore.fields'");
                                }
                            } else {
                                LOG.error("Class name specified in 'index.ignore.fields'" + " not found: "
                                        + clsName);
                            }
                        }
                    }
                } else if (key.startsWith("index.references.")) {
                    String classToIndex = key.substring("index.references.".length());
                    ClassDescriptor cld = os.getModel().getClassDescriptorByName(classToIndex);
                    if (cld != null) {
                        Class<? extends InterMineObject> cls = (Class<? extends InterMineObject>) cld.getType();

                        // special fields (references to follow) come as
                        // a
                        // space-separated list
                        String[] specialFields;
                        if (!StringUtils.isBlank(value)) {
                            specialFields = value.split("\\s+");
                        } else {
                            specialFields = null;
                        }

                        specialReferences.put(cls, specialFields);
                    } else {
                        LOG.error("keyword_search.properties: classDescriptor for '" + classToIndex
                                + "' not found!");
                    }
                } else if (key.startsWith("index.facet.single.")) {
                    String facetName = key.substring("index.facet.single.".length());
                    String facetField = value;
                    facets.add(
                            new KeywordSearchFacetData(facetField, facetName, KeywordSearchFacetType.SINGLE));
                } else if (key.startsWith("index.facet.multi.")) {
                    String facetName = key.substring("index.facet.multi.".length());
                    String facetField = value;
                    facets.add(new KeywordSearchFacetData(facetField, facetName, KeywordSearchFacetType.MULTI));
                } else if (key.startsWith("index.facet.path.")) {
                    String facetName = key.substring("index.facet.path.".length());
                    String[] facetFields = value.split(" ");
                    facets.add(new KeywordSearchFacetData(facetFields, facetName, KeywordSearchFacetType.PATH));
                } else if (key.startsWith("index.boost.")) {
                    String classToBoost = key.substring("index.boost.".length());
                    ClassDescriptor cld = os.getModel().getClassDescriptorByName(classToBoost);
                    if (cld != null) {
                        classBoost.put(cld, Float.valueOf(value));
                    } else {
                        LOG.error("keyword_search.properties: classDescriptor for '" + classToBoost
                                + "' not found!");
                    }
                } else if (key.startsWith("index.prefix")) {
                    String classAndAttribute = key.substring("index.prefix.".length());
                    addAttributePrefix(classAndAttribute, value);
                } else if ("search.debug".equals(key) && !StringUtils.isBlank(value)) {
                    debugOutput = "1".equals(value) || "true".equals(value.toLowerCase())
                            || "on".equals(value.toLowerCase());
                } else if ("index.solrurl".equals(key) && !StringUtils.isBlank(value)) {
                    solrUrl = value;
                } else if ("index.batch.size".equals(key) && !StringUtils.isBlank(value)) {
                    indexBatchSize = Integer.parseInt(value);
                } else if ("index.optimize".equals(key) && !StringUtils.isBlank(value)) {
                    enableOptimize = Boolean.parseBoolean(value);
                }

            }
        } catch (IOException e) {
            LOG.error("keyword_search.properties: errow while loading file '" + configFileName + "'", e);
        }
    } else {
        LOG.error("keyword_search.properties: file '" + configFileName + "' not found!");
    }

    LOG.debug("Indexing - Ignored classes:");
    for (Class<? extends InterMineObject> class1 : ignoredClasses) {
        LOG.debug("- " + class1.getSimpleName());
    }

    LOG.debug("Indexing - Special References:");
    for (Map.Entry<Class<? extends InterMineObject>, String[]> specialReference : specialReferences
            .entrySet()) {
        LOG.debug("- " + specialReference.getKey() + " = " + Arrays.toString(specialReference.getValue()));
    }

    LOG.debug("Indexing - Facets:");
    for (KeywordSearchFacetData facet : facets) {
        LOG.debug("- field = " + facet.getField() + ", name = " + facet.getName() + ", type = "
                + facet.getType().toString());
    }

    LOG.debug("Indexing with and without attribute prefixes:");
    if (attributePrefixes != null) {
        for (String clsAndAttribute : attributePrefixes.keySet()) {
            LOG.debug("- class and attribute: " + clsAndAttribute + " with prefix: "
                    + attributePrefixes.get(clsAndAttribute));
        }
    }

    LOG.info("Search - Debug mode: " + debugOutput);
}

From source file:org.intermine.web.search.ClassAttributes.java

@SuppressWarnings("unchecked")
private static synchronized void parseProperties(ObjectStore os) {
    if (properties != null) {
        return;//from ww w.  j  av  a2s .  co m
    }

    specialReferences = new HashMap<Class<? extends InterMineObject>, String[]>();
    ignoredClasses = new HashSet<Class<? extends InterMineObject>>();
    classBoost = new HashMap<ClassDescriptor, Float>();
    ignoredFields = new HashMap<Class<? extends InterMineObject>, Set<String>>();
    facets = new Vector<KeywordSearchFacetData>();
    debugOutput = true;

    // load config file to figure out special classes
    String configFileName = "keyword_search.properties";
    ClassLoader classLoader = KeywordSearch.class.getClassLoader();
    InputStream configStream = classLoader.getResourceAsStream(configFileName);
    if (configStream != null) {
        properties = new Properties();
        try {
            properties.load(configStream);

            for (Map.Entry<Object, Object> entry : properties.entrySet()) {
                String key = (String) entry.getKey();
                String value = ((String) entry.getValue()).trim();

                if ("index.ignore".equals(key) && !StringUtils.isBlank(value)) {
                    String[] ignoreClassNames = value.split("\\s+");

                    for (String className : ignoreClassNames) {
                        ClassDescriptor cld = os.getModel().getClassDescriptorByName(className);

                        if (cld == null) {
                            LOG.error("Unknown class in config file: " + className);
                        } else {
                            addCldToIgnored(ignoredClasses, cld);
                        }
                    }
                } else if ("index.ignore.fields".equals(key) && !StringUtils.isBlank(value)) {
                    String[] ignoredPaths = value.split("\\s+");

                    for (String ignoredPath : ignoredPaths) {
                        if (StringUtils.countMatches(ignoredPath, ".") != 1) {
                            LOG.error("Fields to ignore specified by 'index.ignore.fields'"
                                    + " should contain Class.field, e.g. Company.name");
                        } else {
                            String clsName = ignoredPath.split("\\.")[0];
                            String fieldName = ignoredPath.split("\\.")[1];

                            ClassDescriptor cld = os.getModel().getClassDescriptorByName(clsName);
                            if (cld != null) {
                                FieldDescriptor fld = cld.getFieldDescriptorByName(fieldName);
                                if (fld != null) {
                                    addToIgnoredFields(ignoredFields, cld, fieldName);
                                } else {
                                    LOG.error("Field name '" + fieldName + "' not found for" + " class '"
                                            + clsName + "' specified in" + "'index.ignore.fields'");
                                }
                            } else {
                                LOG.error("Class name specified in 'index.ignore.fields'" + " not found: "
                                        + clsName);
                            }
                        }
                    }
                } else if (key.startsWith("index.references.")) {
                    String classToIndex = key.substring("index.references.".length());
                    ClassDescriptor cld = os.getModel().getClassDescriptorByName(classToIndex);
                    if (cld != null) {
                        Class<? extends InterMineObject> cls = (Class<? extends InterMineObject>) cld.getType();

                        // special fields (references to follow) come as
                        // a
                        // space-separated list
                        String[] specialFields;
                        if (!StringUtils.isBlank(value)) {
                            specialFields = value.split("\\s+");
                        } else {
                            specialFields = null;
                        }

                        specialReferences.put(cls, specialFields);
                    } else {
                        LOG.error("keyword_search.properties: classDescriptor for '" + classToIndex
                                + "' not found!");
                    }
                } else if (key.startsWith("index.facet.single.")) {
                    String facetName = key.substring("index.facet.single.".length());
                    String facetField = value;
                    facets.add(
                            new KeywordSearchFacetData(facetField, facetName, KeywordSearchFacetType.SINGLE));
                } else if (key.startsWith("index.facet.multi.")) {
                    String facetName = key.substring("index.facet.multi.".length());
                    String facetField = value;
                    facets.add(new KeywordSearchFacetData(facetField, facetName, KeywordSearchFacetType.MULTI));
                } else if (key.startsWith("index.facet.path.")) {
                    String facetName = key.substring("index.facet.path.".length());
                    String[] facetFields = value.split(" ");
                    facets.add(new KeywordSearchFacetData(facetFields, facetName, KeywordSearchFacetType.PATH));
                } else if (key.startsWith("index.boost.")) {
                    String classToBoost = key.substring("index.boost.".length());
                    ClassDescriptor cld = os.getModel().getClassDescriptorByName(classToBoost);
                    if (cld != null) {
                        classBoost.put(cld, Float.valueOf(value));
                    } else {
                        LOG.error("keyword_search.properties: classDescriptor for '" + classToBoost
                                + "' not found!");
                    }
                } else if (key.startsWith("index.prefix")) {
                    String classAndAttribute = key.substring("index.prefix.".length());
                    addAttributePrefix(classAndAttribute, value);
                } else if ("search.debug".equals(key) && !StringUtils.isBlank(value)) {
                    debugOutput = "1".equals(value) || "true".equals(value.toLowerCase())
                            || "on".equals(value.toLowerCase());
                }

                tempDirectory = properties.getProperty("index.temp.directory", "");
            }
        } catch (IOException e) {
            LOG.error("keyword_search.properties: errow while loading file '" + configFileName + "'", e);
        }
    } else {
        LOG.error("keyword_search.properties: file '" + configFileName + "' not found!");
    }

    LOG.info("Indexing - Ignored classes:");
    for (Class<? extends InterMineObject> class1 : ignoredClasses) {
        LOG.info("- " + class1.getSimpleName());
    }

    LOG.info("Indexing - Special References:");
    for (Entry<Class<? extends InterMineObject>, String[]> specialReference : specialReferences.entrySet()) {
        LOG.info("- " + specialReference.getKey() + " = " + Arrays.toString(specialReference.getValue()));
    }

    LOG.info("Indexing - Facets:");
    for (KeywordSearchFacetData facet : facets) {
        LOG.info("- field = " + facet.getField() + ", name = " + facet.getName() + ", type = "
                + facet.getType().toString());
    }

    LOG.info("Indexing with and without attribute prefixes:");
    if (attributePrefixes != null) {
        for (String clsAndAttribute : attributePrefixes.keySet()) {
            LOG.info("- class and attribute: " + clsAndAttribute + " with prefix: "
                    + attributePrefixes.get(clsAndAttribute));
        }
    }

    LOG.info("Search - Debug mode: " + debugOutput);
    LOG.info("Indexing - Temp Dir: " + tempDirectory);
}

From source file:org.jajuk.util.UpgradeManager.java

/**
 * Return Jajuk number version = integer format of the padded release
 * /*w  w  w  .  ja  v a 2  s .co  m*/
 * Jajuk version scheme is XX.YY.ZZ[RCn] (two digits possible for each part of the release)
 * 
 * @param pStringRelease 
 * 
 * @return Jajuk number version = integer format of the padded release
 */
static int getNumberRelease(String pStringRelease) {
    if (pStringRelease == null) {
        // no string provided: use 1.0.0
        return 10000;
    }
    String stringRelease = pStringRelease;
    // We drop any RCx part of the release
    if (pStringRelease.contains("RC")) {
        stringRelease = pStringRelease.split("RC.*")[0];
    }
    // We drop any "dev" part of the release
    if (pStringRelease.contains("dev")) {
        stringRelease = pStringRelease.split("dev.*")[0];
    }
    // Add a trailing .0 if it is a main release like 1.X -> 1.X.0
    int countDot = StringUtils.countMatches(stringRelease, ".");
    if (countDot == 1) {
        stringRelease = stringRelease + ".0";
    }
    // Analyze each part of the release, throw a runtime exception if
    // the format is wrong at this point
    StringTokenizer st = new StringTokenizer(stringRelease, ".");
    int main = 10000 * Integer.parseInt(st.nextToken());
    int minor = 100 * Integer.parseInt(st.nextToken());
    int fix = Integer.parseInt(st.nextToken());
    return main + minor + fix;
}

From source file:org.jalgo.module.am0c0.model.c0.ast.C0AST.java

@Override
public int getLinesCount() {
    String codeText = compressText(getCodeTextInternal());
    return StringUtils.countMatches(codeText, "\n") + 1; //$NON-NLS-1$
}

From source file:org.jalgo.module.am0c0.model.c0.trans.TransformFunction.java

@Override
public int getLinesCount() {
    return StringUtils.countMatches(getCodeText(), "\n") + 1; //$NON-NLS-1$
}

From source file:org.jamwiki.db.WikiPreparedStatement.java

/**
 *
 *///w  w w  . ja va 2s  . c  om
public WikiPreparedStatement(String sql) {
    this.sql = sql;
    this.numElements = StringUtils.countMatches(sql, "?");
    this.params = new Object[numElements];
    this.paramTypes = new int[numElements];
}

From source file:org.jamwiki.parser.jflex.JFlexLexer.java

/**
 *
 *//*from  ww  w.ja  va 2s.  c o  m*/
protected void parseParagraphStart(String raw) {
    int pushback = raw.length();
    if (this.mode >= JFlexParser.MODE_LAYOUT) {
        this.pushTag("p", null);
        int newlineCount = StringUtils.countMatches(raw, "\n");
        if (newlineCount > 0) {
            pushback = StringUtils.stripStart(raw, " \n\r\t").length();
        }
        if (newlineCount == 2) {
            // if the pattern matched two opening newlines then start the paragraph with a <br /> tag
            this.append("<br />\n");
        }
    }
    yypushback(pushback);
}