Example usage for java.util SortedSet addAll

List of usage examples for java.util SortedSet addAll

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Introduction

In this page you can find the example usage for java.util SortedSet addAll.

Prototype

boolean addAll(Collection<? extends E> c);

Source Link

Document

Adds all of the elements in the specified collection to this set if they're not already present (optional operation).

Usage

From source file:org.drugis.addis.presentation.wizard.NetworkMetaAnalysisWizardPM.java

public boolean rebuildRawAlternativesGraph() {
    if (!d_rebuildRawNeeded) {
        return false;
    }/*from ww  w  .  j av a2s  . co  m*/
    // Determine set of treatment definitions
    SortedSet<TreatmentDefinition> definitions = new TreeSet<TreatmentDefinition>();
    if (d_indicationHolder.getValue() != null && d_outcomeHolder.getValue() != null) {
        for (Study s : getStudiesEndpointAndIndication()) {
            definitions.addAll(s.getMeasuredTreatmentDefinitions(d_outcomeHolder.getValue()));
        }
    }
    d_rawTreatmentDefinitions.clear();
    d_rawTreatmentDefinitions.addAll(definitions);

    // Rebuild the graph
    d_rawAlternativesGraph.rebuildGraph();

    d_rebuildRawNeeded = false;
    return true;
}

From source file:org.dbflute.saflute.web.servlet.filter.RequestLoggingFilter.java

protected SortedSet<?> toSortedSet(final Enumeration<?> enu) {
    final SortedSet<Object> set = new TreeSet<Object>();
    set.addAll(Collections.list(enu));
    return set;//from   www. j av  a  2 s . c om
}

From source file:org.apache.accumulo.core.util.shell.commands.DUCommand.java

@Override
public int execute(final String fullCommand, final CommandLine cl, final Shell shellState)
        throws IOException, TableNotFoundException, NamespaceNotFoundException {

    final SortedSet<String> tables = new TreeSet<String>(Arrays.asList(cl.getArgs()));

    if (cl.hasOption(Shell.tableOption)) {
        String tableName = cl.getOptionValue(Shell.tableOption);
        if (!shellState.getConnector().tableOperations().exists(tableName)) {
            throw new TableNotFoundException(tableName, tableName, "specified table that doesn't exist");
        }/*from w ww  .  j a  v  a  2 s .  com*/
        tables.add(tableName);
    }

    if (cl.hasOption(optNamespace.getOpt())) {
        Instance instance = shellState.getInstance();
        String namespaceId = Namespaces.getNamespaceId(instance, cl.getOptionValue(optNamespace.getOpt()));
        tables.addAll(Namespaces.getTableNames(instance, namespaceId));
    }

    boolean prettyPrint = cl.hasOption(optHumanReadble.getOpt()) ? true : false;

    // Add any patterns
    if (cl.hasOption(optTablePattern.getOpt())) {
        for (String table : shellState.getConnector().tableOperations().list()) {
            if (table.matches(cl.getOptionValue(optTablePattern.getOpt()))) {
                tables.add(table);
            }
        }
    }

    // If we didn't get any tables, and we have a table selected, add the current table
    if (tables.isEmpty() && !shellState.getTableName().isEmpty()) {
        tables.add(shellState.getTableName());
    }

    try {
        String valueFormat = prettyPrint ? "%9s" : "%,24d";
        for (DiskUsage usage : shellState.getConnector().tableOperations().getDiskUsage(tables)) {
            Object value = prettyPrint ? NumUtil.bigNumberForSize(usage.getUsage()) : usage.getUsage();
            shellState.getReader().println(String.format(valueFormat + " %s", value, usage.getTables()));
        }
    } catch (Exception ex) {
        throw new RuntimeException(ex);
    }
    return 0;
}

From source file:org.mzd.shap.domain.Feature.java

/**
 * A verbose header for fasta output. /*from  ww w  .j  ava2 s. com*/
 * 
 * When a persistence layer is involved (eg. Hibernate), this method should 
 * only be used when extra detail is necessary. It navigates associations 
 * which will result in additional queries.
 * 
 * @return a verbose header for fasta output.
 */
public String verboseFastaHeader() {
    // Create a header from the available fields
    StringBuffer header = new StringBuffer();

    header.append(getQueryId());

    // Select the top annotation by rank and then alphabetically.
    if (getAnnotations().size() > 0) {
        SortedSet<Annotation> sortedAnno = new TreeSet<Annotation>(new Comparator<Annotation>() {
            public int compare(Annotation a1, Annotation a2) {
                Annotator ar1 = a1.getAnnotator();
                Annotator ar2 = a2.getAnnotator();
                return ar2.getRank().compareTo(ar1.getRank());
            }
        });
        sortedAnno.addAll(getAnnotations());
        Annotation topAnno = sortedAnno.first();
        header.append(" " + Fasta.formatAttribute("acc", topAnno.getAccession()));
        header.append(" " + Fasta.formatAttribute("desc", topAnno.getDescription()));
        header.append(" " + Fasta.formatAttribute("anno",
                topAnno.getAnnotator().getName() + "," + topAnno.getConfidence().toString()));
    }

    if (getAliases().size() > 0) {
        StringBuffer aliases = new StringBuffer();
        for (Iterator<String> it = getAliases().iterator(); it.hasNext();) {
            aliases.append(it.next());
            if (it.hasNext()) {
                aliases.append(",");
            }
        }
        header.append(" " + Fasta.formatAttribute("aliases", aliases.toString()));
    }

    header.append(
            " " + Fasta.formatAttribute("coords", getLocation().getStart() + ".." + getLocation().getEnd()));
    header.append(" " + Fasta.formatAttribute("strand", getLocation().getStrand().toString()));
    header.append(" " + Fasta.formatAttribute("orf_conf", getConfidence().toString()));
    header.append(" " + Fasta.formatAttribute("partial", isPartial().toString()));

    return header.toString();
}

From source file:com.opengamma.financial.analytics.ircurve.CurveSpecificationBuilderConfiguration.java

/**
 * Get all available tenors/*from  w  w w  . j a v a2s.  com*/
 *
 * @return the sorted tenors
 */
public SortedSet<Tenor> getAllTenors() {
    final SortedSet<Tenor> allTenors = new TreeSet<Tenor>();
    if (getBasisSwapInstrumentProviders() != null) {
        allTenors.addAll(getBasisSwapInstrumentProviders().keySet());
    }
    if (getCashInstrumentProviders() != null) {
        allTenors.addAll(getCashInstrumentProviders().keySet());
    }
    if (getCDORInstrumentProviders() != null) {
        allTenors.addAll(getCDORInstrumentProviders().keySet());
    }
    if (getCiborInstrumentProviders() != null) {
        allTenors.addAll(getCiborInstrumentProviders().keySet());
    }
    if (getEuriborInstrumentProviders() != null) {
        allTenors.addAll(getEuriborInstrumentProviders().keySet());
    }
    if (getFra3MInstrumentProviders() != null) {
        allTenors.addAll(getFra3MInstrumentProviders().keySet());
    }
    if (getFra6MInstrumentProviders() != null) {
        allTenors.addAll(getFra6MInstrumentProviders().keySet());
    }
    if (getFutureInstrumentProviders() != null) {
        allTenors.addAll(getFutureInstrumentProviders().keySet());
    }
    if (getLiborInstrumentProviders() != null) {
        allTenors.addAll(getLiborInstrumentProviders().keySet());
    }
    if (getOISSwapInstrumentProviders() != null) {
        allTenors.addAll(getOISSwapInstrumentProviders().keySet());
    }
    if (getStiborInstrumentProviders() != null) {
        allTenors.addAll(getStiborInstrumentProviders().keySet());
    }
    if (getSwap3MInstrumentProviders() != null) {
        allTenors.addAll(getSwap3MInstrumentProviders().keySet());
    }
    if (getSwap6MInstrumentProviders() != null) {
        allTenors.addAll(getSwap6MInstrumentProviders().keySet());
    }
    if (getSwap12MInstrumentProviders() != null) {
        allTenors.addAll(getSwap12MInstrumentProviders().keySet());
    }
    if (getTenorSwapInstrumentProviders() != null) {
        allTenors.addAll(getTenorSwapInstrumentProviders().keySet());
    }
    if (getSimpleZeroDepositInstrumentProviders() != null) {
        allTenors.addAll(getSimpleZeroDepositInstrumentProviders().keySet());
    }
    if (getPeriodicZeroDepositInstrumentProviders() != null) {
        allTenors.addAll(getPeriodicZeroDepositInstrumentProviders().keySet());
    }
    if (getContinuousZeroDepositInstrumentProviders() != null) {
        allTenors.addAll(getContinuousZeroDepositInstrumentProviders().keySet());
    }
    if (getSwap28DInstrumentProviders() != null) {
        allTenors.addAll(getSwap28DInstrumentProviders().keySet());
    }
    return allTenors;
}

From source file:info.rmapproject.core.rmapservice.impl.openrdf.ORMapDiSCOMgr.java

/**
 * Get IRI of next version of a DiSCO.//from  w  ww  .  j a  va  2 s  . c  o m
 *
 * @param discoID  IRI of DISCO
 * @param event2disco Map from events to all versions of DiSCOs
 * @param date2event  Map from date events associated with version of DiSCO
 * @param ts the triplestore instance
 * @return IRI of next version of DiSCO, or null if none found
 * @throws RMapException the RMap exception
 * @throws RMapObjectNotFoundException the RMap object not found exception
 * @throws RMapDefectiveArgumentException the RMap defective argument exception
 */
protected IRI getNextIRI(IRI discoID, Map<IRI, IRI> event2disco, Map<Date, IRI> date2event,
        SesameTriplestore ts)
        throws RMapException, RMapObjectNotFoundException, RMapDefectiveArgumentException {
    if (discoID == null) {
        throw new RMapDefectiveArgumentException("null DiSCO id");
    }
    if (event2disco == null) {
        throw new RMapDefectiveArgumentException("Null event2disco map");
    }
    Map<IRI, IRI> disco2event = Utils.invertMap(event2disco);
    if (date2event == null) {
        date2event = eventmgr.getDate2EventMap(event2disco.keySet(), ts);
    }
    Map<IRI, Date> event2date = Utils.invertMap(date2event);
    IRI discoEventId = disco2event.get(discoID);
    Date eventDate = event2date.get(discoEventId);
    SortedSet<Date> sortedDates = new TreeSet<Date>();
    sortedDates.addAll(date2event.keySet());
    SortedSet<Date> laterDates = sortedDates.tailSet(eventDate);
    IRI nextDiscoId = null;
    if (laterDates.size() > 1) {
        Date[] dateArray = laterDates.toArray(new Date[laterDates.size()]);
        IRI nextEventId = date2event.get(dateArray[1]);
        nextDiscoId = event2disco.get(nextEventId);
    }
    return nextDiscoId;
}

From source file:architecture.common.license.License.java

public byte[] getFingerprint() {
    StringBuffer buf = new StringBuffer(100);
    buf.append(id);//from  ww  w.  jav  a  2  s .  c o m
    buf.append(name);
    buf.append(version);
    buf.append(dateFormat.format(creationDate));
    buf.append(type.name());
    SortedSet<Module> sortedModules = new TreeSet<Module>(new Comparator<Module>() {
        public int compare(Module module, Module module1) {
            return module.name.compareTo(module1.name);
        }
    });

    sortedModules.addAll(modules);

    for (Module m : sortedModules) {
        buf.append(m.name);
    }

    SortedSet<String> sortedKeys = new TreeSet<String>(properties.keySet());
    for (String key : sortedKeys) {
        buf.append(key);
    }

    if (client != null) {
        buf.append(client.getCompany());
        buf.append(client.getName());
        buf.append(client.getUrl());
    }
    try {
        return buf.toString().getBytes(ApplicationConstants.DEFAULT_CHAR_ENCODING);
    } catch (UnsupportedEncodingException ue) {
        log.fatal(ue.getMessage(), ue);
    }
    return buf.toString().getBytes();
}

From source file:pt.ist.expenditureTrackingSystem.presentationTier.actions.statistics.StatisticsAction.java

private Spreadsheet generateSpreadSheet(final SortedMap<Object, BigDecimal> sumMap,
        final SortedMap<Object, BigDecimal> medianMap, final SortedMap<Object, BigDecimal> averageMap,
        final SortedMap<Object, BigDecimal> minsMap, final SortedMap<Object, BigDecimal> maxsMap) {
    final Spreadsheet spreadsheet = new Spreadsheet("Estatsticas");
    spreadsheet.setHeader("Estado");
    spreadsheet.setHeader("Soma");
    spreadsheet.setHeader("Mediana Tempo (em dias)");
    spreadsheet.setHeader("Mdia Tempo (em dias)");
    spreadsheet.setHeader("Tempo Mnimo (em dias)");
    spreadsheet.setHeader("Tempo Mximo (em dias)");
    final SortedSet<Object> types = new TreeSet<Object>();
    types.addAll(sumMap.keySet());
    types.addAll(medianMap.keySet());// w  ww. j a  va2 s.c  o  m
    types.addAll(averageMap.keySet());
    BigDecimal DAYS_CONST = new BigDecimal(1000 * 3600 * 24);
    for (final Object type : types) {
        final BigDecimal sum = sumMap.get(type);
        final BigDecimal median = medianMap.get(type);
        final BigDecimal average = averageMap.get(type);
        final BigDecimal min = minsMap.get(type);
        final BigDecimal max = maxsMap.get(type);

        final Row row = spreadsheet.addRow();
        row.setCell(((IPresentableEnum) type).getLocalizedName());
        row.setCell(sum == null ? "0" : sum.toString());
        row.setCell(median == null ? "" : median.divide(DAYS_CONST, 2, BigDecimal.ROUND_HALF_UP).toString());
        row.setCell(average == null ? "" : average.divide(DAYS_CONST, 2, BigDecimal.ROUND_HALF_UP).toString());
        row.setCell(min == null ? "" : min.divide(DAYS_CONST, 2, BigDecimal.ROUND_HALF_UP).toString());
        row.setCell(max == null ? "" : max.divide(DAYS_CONST, 2, BigDecimal.ROUND_HALF_UP).toString());
    }
    return spreadsheet;
}

From source file:info.rmapproject.core.rmapservice.impl.openrdf.ORMapDiSCOMgr.java

/**
 * Get IRI of previous version of this DiSCO.
 *
 * @param discoID IRI of DiSCO/*from   w  w w  . j ava2  s  .c o  m*/
 * @param event2disco Map from events to all versions of DiSCOs
 * @param date2event  Map from date events associated with version of DiSCO
 * @param ts the triplestore instance
 * @return IRI of previous version of this DiSCO, or null if none found
 * @throws RMapException the RMap exception
 * @throws RMapObjectNotFoundException the RMap object not found exception
 * @throws RMapDefectiveArgumentException the RMap defective argument exception
 */
protected IRI getPreviousIRI(IRI discoID, Map<IRI, IRI> event2disco, Map<Date, IRI> date2event,
        SesameTriplestore ts)
        throws RMapException, RMapObjectNotFoundException, RMapDefectiveArgumentException {
    if (discoID == null) {
        throw new RMapDefectiveArgumentException("null DiSCO id");
    }
    if (event2disco == null) {
        throw new RMapDefectiveArgumentException("Null event2disco map");
    }
    Map<IRI, IRI> disco2event = Utils.invertMap(event2disco);

    if (date2event == null) {
        date2event = eventmgr.getDate2EventMap(event2disco.keySet(), ts);
    }

    Map<IRI, Date> event2date = Utils.invertMap(date2event);

    IRI discoEventId = disco2event.get(discoID);
    Date eventDate = event2date.get(discoEventId);

    SortedSet<Date> sortedDates = new TreeSet<Date>();
    sortedDates.addAll(date2event.keySet());
    SortedSet<Date> earlierDates = sortedDates.headSet(eventDate);
    IRI prevDiscoId = null;
    if (earlierDates.size() > 0) {
        Date previousDate = earlierDates.last();
        IRI prevEventId = date2event.get(previousDate);
        prevDiscoId = event2disco.get(prevEventId);
    }
    return prevDiscoId;
}