Example usage for java.io PrintWriter flush

List of usage examples for java.io PrintWriter flush

Introduction

In this page you can find the example usage for java.io PrintWriter flush.

Prototype

public void flush() 

Source Link

Document

Flushes the stream.

Usage

From source file:ch.epfl.lsir.xin.test.UserAverageTest.java

/**
 * @param args// w  w  w .j ava2  s  . co m
 */
public static void main(String[] args) throws Exception {
    // TODO Auto-generated method stub

    PrintWriter logger = new PrintWriter(".//results//UserAverage");
    PropertiesConfiguration config = new PropertiesConfiguration();
    config.setFile(new File(".//conf//UserAverage.properties"));
    try {
        config.load();
    } catch (ConfigurationException e) {
        // TODO Auto-generated catch block
        e.printStackTrace();
    }

    logger.println(new SimpleDateFormat("yyyy-MM-dd HH:mm:ss").format(new Date()) + " Read rating data...");
    DataLoaderFile loader = new DataLoaderFile(".//data//MoveLens100k.txt");
    loader.readSimple();
    DataSetNumeric dataset = loader.getDataset();
    System.out.println("Number of ratings: " + dataset.getRatings().size() + " Number of users: "
            + dataset.getUserIDs().size() + " Number of items: " + dataset.getItemIDs().size());
    logger.println("Number of ratings: " + dataset.getRatings().size() + " Number of users: "
            + dataset.getUserIDs().size() + " Number of items: " + dataset.getItemIDs().size());
    logger.flush();

    double totalMAE = 0;
    double totalRMSE = 0;
    int F = 5;
    logger.println(F + "- folder cross validation.");
    ArrayList<ArrayList<NumericRating>> folders = new ArrayList<ArrayList<NumericRating>>();
    for (int i = 0; i < F; i++) {
        folders.add(new ArrayList<NumericRating>());
    }
    while (dataset.getRatings().size() > 0) {
        int index = new Random().nextInt(dataset.getRatings().size());
        int r = new Random().nextInt(F);
        folders.get(r).add(dataset.getRatings().get(index));
        dataset.getRatings().remove(index);
    }
    for (int folder = 1; folder <= F; folder++) {
        logger.println("Folder: " + folder);
        System.out.println("Folder: " + folder);
        ArrayList<NumericRating> trainRatings = new ArrayList<NumericRating>();
        ArrayList<NumericRating> testRatings = new ArrayList<NumericRating>();
        for (int i = 0; i < folders.size(); i++) {
            if (i == folder - 1)//test data
            {
                testRatings.addAll(folders.get(i));
            } else {//training data
                trainRatings.addAll(folders.get(i));
            }
        }

        //create rating matrix
        HashMap<String, Integer> userIDIndexMapping = new HashMap<String, Integer>();
        HashMap<String, Integer> itemIDIndexMapping = new HashMap<String, Integer>();
        for (int i = 0; i < dataset.getUserIDs().size(); i++) {
            userIDIndexMapping.put(dataset.getUserIDs().get(i), i);
        }
        for (int i = 0; i < dataset.getItemIDs().size(); i++) {
            itemIDIndexMapping.put(dataset.getItemIDs().get(i), i);
        }
        RatingMatrix trainRatingMatrix = new RatingMatrix(dataset.getUserIDs().size(),
                dataset.getItemIDs().size());
        for (int i = 0; i < trainRatings.size(); i++) {
            trainRatingMatrix.set(userIDIndexMapping.get(trainRatings.get(i).getUserID()),
                    itemIDIndexMapping.get(trainRatings.get(i).getItemID()), trainRatings.get(i).getValue());
        }
        trainRatingMatrix.calculateGlobalAverage();
        RatingMatrix testRatingMatrix = new RatingMatrix(dataset.getUserIDs().size(),
                dataset.getItemIDs().size());
        for (int i = 0; i < testRatings.size(); i++) {
            testRatingMatrix.set(userIDIndexMapping.get(testRatings.get(i).getUserID()),
                    itemIDIndexMapping.get(testRatings.get(i).getItemID()), testRatings.get(i).getValue());
        }
        System.out.println("Training: " + trainRatingMatrix.getTotalRatingNumber() + " vs Test: "
                + testRatingMatrix.getTotalRatingNumber());

        logger.println("Initialize a recommendation model based on user average method.");
        UserAverage algo = new UserAverage(trainRatingMatrix);
        algo.setLogger(logger);
        algo.build();
        algo.saveModel(".//localModels//" + config.getString("NAME"));
        logger.println("Save the model.");
        System.out.println(trainRatings.size() + " vs. " + testRatings.size());

        double RMSE = 0;
        double MAE = 0;
        int count = 0;
        for (int i = 0; i < testRatings.size(); i++) {
            NumericRating rating = testRatings.get(i);
            double prediction = algo.predict(userIDIndexMapping.get(rating.getUserID()),
                    itemIDIndexMapping.get(rating.getItemID()));
            if (Double.isNaN(prediction)) {
                System.out.println("no prediction");
                continue;
            }
            MAE = MAE + Math.abs(rating.getValue() - prediction);
            RMSE = RMSE + Math.pow((rating.getValue() - prediction), 2);
            count++;
        }
        MAE = MAE / count;
        RMSE = Math.sqrt(RMSE / count);

        logger.println(new SimpleDateFormat("yyyy-MM-dd HH:mm:ss").format(new Date()) + " MAE: " + MAE
                + " RMSE: " + RMSE);
        logger.flush();
        totalMAE = totalMAE + MAE;
        totalRMSE = totalRMSE + RMSE;
    }

    System.out.println("MAE: " + totalMAE / F + " RMSE: " + totalRMSE / F);
    logger.println(new SimpleDateFormat("yyyy-MM-dd HH:mm:ss").format(new Date()) + " Final results: MAE: "
            + totalMAE / F + " RMSE: " + totalRMSE / F);
    logger.flush();
    logger.close();
    //MAE: 0.8353035962363073 RMSE: 1.0422971886952053 (MovieLens 100k)
}

From source file:ch.epfl.lsir.xin.test.ItemAverageTest.java

/**
 * @param args/*from  w  w  w .j a  va2  s  .  c om*/
 */
public static void main(String[] args) throws Exception {
    // TODO Auto-generated method stub

    PrintWriter logger = new PrintWriter(".//results//ItemAverage");
    PropertiesConfiguration config = new PropertiesConfiguration();
    config.setFile(new File(".//conf//ItemAverage.properties"));
    try {
        config.load();
    } catch (ConfigurationException e) {
        // TODO Auto-generated catch block
        e.printStackTrace();
    }

    logger.println(new SimpleDateFormat("yyyy-MM-dd HH:mm:ss").format(new Date()) + " Read rating data...");
    DataLoaderFile loader = new DataLoaderFile(".//data//MoveLens100k.txt");
    loader.readSimple();
    DataSetNumeric dataset = loader.getDataset();
    System.out.println("Number of ratings: " + dataset.getRatings().size() + " Number of users: "
            + dataset.getUserIDs().size() + " Number of items: " + dataset.getItemIDs().size());
    logger.println("Number of ratings: " + dataset.getRatings().size() + ", Number of users: "
            + dataset.getUserIDs().size() + ", Number of items: " + dataset.getItemIDs().size());
    logger.flush();

    double totalMAE = 0;
    double totalRMSE = 0;
    int F = 5;
    logger.println(F + "- folder cross validation.");
    ArrayList<ArrayList<NumericRating>> folders = new ArrayList<ArrayList<NumericRating>>();
    for (int i = 0; i < F; i++) {
        folders.add(new ArrayList<NumericRating>());
    }
    while (dataset.getRatings().size() > 0) {
        int index = new Random().nextInt(dataset.getRatings().size());
        int r = new Random().nextInt(F);
        folders.get(r).add(dataset.getRatings().get(index));
        dataset.getRatings().remove(index);
    }
    for (int folder = 1; folder <= F; folder++) {
        logger.println("Folder: " + folder);
        logger.flush();
        System.out.println("Folder: " + folder);
        ArrayList<NumericRating> trainRatings = new ArrayList<NumericRating>();
        ArrayList<NumericRating> testRatings = new ArrayList<NumericRating>();
        for (int i = 0; i < folders.size(); i++) {
            if (i == folder - 1)//test data
            {
                testRatings.addAll(folders.get(i));
            } else {//training data
                trainRatings.addAll(folders.get(i));
            }
        }

        //create rating matrix
        HashMap<String, Integer> userIDIndexMapping = new HashMap<String, Integer>();
        HashMap<String, Integer> itemIDIndexMapping = new HashMap<String, Integer>();
        for (int i = 0; i < dataset.getUserIDs().size(); i++) {
            userIDIndexMapping.put(dataset.getUserIDs().get(i), i);
        }
        for (int i = 0; i < dataset.getItemIDs().size(); i++) {
            itemIDIndexMapping.put(dataset.getItemIDs().get(i), i);
        }
        RatingMatrix trainRatingMatrix = new RatingMatrix(dataset.getUserIDs().size(),
                dataset.getItemIDs().size());
        for (int i = 0; i < trainRatings.size(); i++) {
            trainRatingMatrix.set(userIDIndexMapping.get(trainRatings.get(i).getUserID()),
                    itemIDIndexMapping.get(trainRatings.get(i).getItemID()), trainRatings.get(i).getValue());
        }
        trainRatingMatrix.calculateGlobalAverage();
        RatingMatrix testRatingMatrix = new RatingMatrix(dataset.getUserIDs().size(),
                dataset.getItemIDs().size());
        for (int i = 0; i < testRatings.size(); i++) {
            testRatingMatrix.set(userIDIndexMapping.get(testRatings.get(i).getUserID()),
                    itemIDIndexMapping.get(testRatings.get(i).getItemID()), testRatings.get(i).getValue());
        }
        System.out.println("Training: " + trainRatingMatrix.getTotalRatingNumber() + " vs Test: "
                + testRatingMatrix.getTotalRatingNumber());

        logger.println("Initialize a recommendation model based on item average method.");
        ItemAverage algo = new ItemAverage(trainRatingMatrix);
        algo.setLogger(logger);
        algo.build();
        algo.saveModel(".//localModels//" + config.getString("NAME"));
        logger.println("Save the model.");
        logger.flush();
        System.out.println(trainRatings.size() + " vs. " + testRatings.size());

        double RMSE = 0;
        double MAE = 0;
        int count = 0;
        for (int i = 0; i < testRatings.size(); i++) {
            NumericRating rating = testRatings.get(i);
            double prediction = algo.predict(userIDIndexMapping.get(rating.getUserID()),
                    itemIDIndexMapping.get(rating.getItemID()));
            if (Double.isNaN(prediction)) {
                System.out.println("no prediction");
                continue;
            }
            MAE = MAE + Math.abs(rating.getValue() - prediction);
            RMSE = RMSE + Math.pow((rating.getValue() - prediction), 2);
            count++;
        }
        MAE = MAE / count;
        RMSE = Math.sqrt(RMSE / count);

        logger.println(new SimpleDateFormat("yyyy-MM-dd HH:mm:ss").format(new Date()) + " MAE: " + MAE
                + " RMSE: " + RMSE);
        logger.flush();
        //         System.out.println("MAE: " + MAE + " RMSE: " + RMSE);
        totalMAE = totalMAE + MAE;
        totalRMSE = totalRMSE + RMSE;
    }

    System.out.println("MAE: " + totalMAE / F + " RMSE: " + totalRMSE / F);
    logger.println(new SimpleDateFormat("yyyy-MM-dd HH:mm:ss").format(new Date()) + " Final results: MAE: "
            + totalMAE / F + " RMSE: " + totalRMSE / F);
    logger.flush();
    //MAE: 0.8173633324758338 RMSE: 1.0251973503888645 (MovieLens 100K)

}

From source file:com.tremolosecurity.openunison.util.OpenUnisonUtils.java

public static void main(String[] args) throws Exception {

    logger = org.apache.logging.log4j.LogManager.getLogger(OpenUnisonUtils.class.getName());

    Options options = new Options();
    options.addOption("unisonXMLFile", true, "The full path to the Unison xml file");
    options.addOption("keystorePath", true, "The full path to the Unison keystore");
    options.addOption("chainName", true, "The name of the authentication chain");
    options.addOption("mechanismName", true, "The name of the authentication mechanism for SAML2");
    options.addOption("idpName", true, "The name of the identity provider application");
    options.addOption("pathToMetaData", true, "The full path to the saml2 metadata file");
    options.addOption("createDefault", false, "If set, add default parameters");
    options.addOption("action", true,
            "export-sp-metadata, import-sp-metadata, export-secretkey, print-secretkey, import-idp-metadata, export-idp-metadata, clear-dlq, import-secretkey, create-secretkey");
    options.addOption("urlBase", true, "Base URL, no URI; https://host:port");
    options.addOption("alias", true, "Key alias");
    options.addOption("newKeystorePath", true, "Path to the new keystore");
    options.addOption("newKeystorePassword", true, "Password for the new keystore");
    options.addOption("help", false, "Prints this message");
    options.addOption("signMetadataWithKey", true, "Signs the metadata with the specified key");
    options.addOption("dlqName", true, "The name of the dead letter queue");
    options.addOption("upgradeFrom106", false, "Updates workflows from 1.0.6");
    options.addOption("secretkey", true, "base64 encoded secret key");
    options.addOption("envFile", true, "Environment variables for parmaterized configs");

    CommandLineParser parser = new DefaultParser();
    CommandLine cmd = parser.parse(options, args, true);

    if (args.length == 0 || cmd.hasOption("help")) {
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("OpenUnisonUtils", options);
    }// ww w  . ja v a2s  . c  o m

    logger.info("Loading Unison Configuration");
    String unisonXMLFile = loadOption(cmd, "unisonXMLFile", options);
    TremoloType ttRead = loadTremoloType(unisonXMLFile, cmd, options);

    String action = loadOption(cmd, "action", options);
    TremoloType ttWrite = null;
    if (action.equalsIgnoreCase("import-sp-metadata") || action.equalsIgnoreCase("import-idp-metadata")) {
        ttWrite = loadTremoloType(unisonXMLFile);
    }

    logger.info("Configuration loaded");

    logger.info("Loading the keystore...");
    String ksPath = loadOption(cmd, "keystorePath", options);

    KeyStore ks = loadKeyStore(ksPath, ttRead);

    logger.info("...loaded");

    if (action.equalsIgnoreCase("import-sp-metadata")) {

        importMetaData(options, cmd, unisonXMLFile, ttRead, ttWrite, ksPath, ks);
    } else if (action.equalsIgnoreCase("export-sp-metadata")) {
        exportSPMetaData(options, cmd, ttRead, ks);

    } else if (action.equalsIgnoreCase("print-secretkey")) {
        printSecreyKey(options, cmd, ttRead, ks);
    } else if (action.equalsIgnoreCase("import-secretkey")) {
        importSecreyKey(options, cmd, ttRead, ks, ksPath);
    } else if (action.equalsIgnoreCase("create-secretkey")) {
        Security.addProvider(new BouncyCastleProvider());
        logger.info("Creating AES-256 secret key");
        String alias = loadOption(cmd, "alias", options);
        logger.info("Alias : '" + alias + "'");
        KeyGenerator kg = KeyGenerator.getInstance("AES", "BC");
        kg.init(256, new SecureRandom());
        SecretKey sk = kg.generateKey();
        ks.setKeyEntry(alias, sk, ttRead.getKeyStorePassword().toCharArray(), null);
        logger.info("Saving key");
        ks.store(new FileOutputStream(ksPath), ttRead.getKeyStorePassword().toCharArray());
        logger.info("Finished");
    } else if (action.equalsIgnoreCase("export-secretkey")) {
        logger.info("Export Secret Key");

        logger.info("Loading key");
        String alias = loadOption(cmd, "alias", options);
        SecretKey key = (SecretKey) ks.getKey(alias, ttRead.getKeyStorePassword().toCharArray());
        logger.info("Loading new keystore path");
        String pathToNewKeystore = loadOption(cmd, "newKeystorePath", options);
        logger.info("Loading new keystore password");
        String ksPassword = loadOption(cmd, "newKeystorePassword", options);

        KeyStore newKS = KeyStore.getInstance("PKCS12");
        newKS.load(null, ttRead.getKeyStorePassword().toCharArray());
        newKS.setKeyEntry(alias, key, ksPassword.toCharArray(), null);
        newKS.store(new FileOutputStream(pathToNewKeystore), ksPassword.toCharArray());
        logger.info("Exported");
    } else if (action.equalsIgnoreCase("import-idp-metadata")) {
        importIdpMetadata(options, cmd, unisonXMLFile, ttRead, ttWrite, ksPath, ks);

    } else if (action.equalsIgnoreCase("export-idp-metadata")) {
        exportIdPMetadata(options, cmd, ttRead, ks);
    } else if (action.equalsIgnoreCase("clear-dlq")) {
        logger.info("Getting the DLQ Name...");
        String dlqName = loadOption(cmd, "dlqName", options);
        QueUtils.emptyDLQ(ttRead, dlqName);
    } else if (action.equalsIgnoreCase("upgradeFrom106")) {
        logger.info("Upgrading OpenUnison's configuration from 1.0.6");

        String backupFileName = unisonXMLFile + ".bak";

        logger.info("Backing up to '" + backupFileName + "'");

        BufferedReader in = new BufferedReader(new InputStreamReader(new FileInputStream(unisonXMLFile)));
        PrintWriter out = new PrintWriter(new FileOutputStream(backupFileName));
        String line = null;
        while ((line = in.readLine()) != null) {
            out.println(line);
        }
        out.flush();
        out.close();
        in.close();

        ByteArrayOutputStream bout = new ByteArrayOutputStream();
        AddChoiceToTasks.convert(new FileInputStream(unisonXMLFile), bout);
        FileOutputStream fsout = new FileOutputStream(unisonXMLFile);
        fsout.write(bout.toByteArray());
        fsout.flush();
        fsout.close();

    }

}

From source file:ch.epfl.lsir.xin.test.ItemBasedCFTest.java

/**
 * @param args/*from w  w w .ja v a  2  s  . c  o  m*/
 */
public static void main(String[] args) throws Exception {
    // TODO Auto-generated method stub

    PrintWriter logger = new PrintWriter(".//results//ItemBasedCF");
    PropertiesConfiguration config = new PropertiesConfiguration();
    config.setFile(new File(".//conf//ItemBasedCF.properties"));
    try {
        config.load();
    } catch (ConfigurationException e) {
        // TODO Auto-generated catch block
        e.printStackTrace();
    }

    logger.println(new SimpleDateFormat("yyyy-MM-dd HH:mm:ss").format(new Date()) + " Read rating data...");
    DataLoaderFile loader = new DataLoaderFile(".//data//MoveLens100k.txt");
    loader.readSimple();
    DataSetNumeric dataset = loader.getDataset();
    System.out.println("Number of ratings: " + dataset.getRatings().size() + " Number of users: "
            + dataset.getUserIDs().size() + " Number of items: " + dataset.getItemIDs().size());
    logger.println("Number of ratings: " + dataset.getRatings().size() + ", Number of users: "
            + dataset.getUserIDs().size() + ", Number of items: " + dataset.getItemIDs().size());
    logger.flush();

    double totalMAE = 0;
    double totalRMSE = 0;
    double totalPrecision = 0;
    double totalRecall = 0;
    double totalMAP = 0;
    double totalNDCG = 0;
    double totalMRR = 0;
    double totalAUC = 0;
    int F = 5;
    logger.println(F + "- folder cross validation.");
    ArrayList<ArrayList<NumericRating>> folders = new ArrayList<ArrayList<NumericRating>>();
    for (int i = 0; i < F; i++) {
        folders.add(new ArrayList<NumericRating>());
    }

    while (dataset.getRatings().size() > 0) {
        int index = new Random().nextInt(dataset.getRatings().size());
        int r = new Random().nextInt(F);
        folders.get(r).add(dataset.getRatings().get(index));
        dataset.getRatings().remove(index);
    }

    for (int folder = 1; folder <= F; folder++) {
        logger.println("Folder: " + folder);
        System.out.println("Folder: " + folder);
        ArrayList<NumericRating> trainRatings = new ArrayList<NumericRating>();
        ArrayList<NumericRating> testRatings = new ArrayList<NumericRating>();
        for (int i = 0; i < folders.size(); i++) {
            if (i == folder - 1)//test data
            {
                testRatings.addAll(folders.get(i));
            } else {//training data
                trainRatings.addAll(folders.get(i));
            }
        }

        //create rating matrix
        HashMap<String, Integer> userIDIndexMapping = new HashMap<String, Integer>();
        HashMap<String, Integer> itemIDIndexMapping = new HashMap<String, Integer>();
        for (int i = 0; i < dataset.getUserIDs().size(); i++) {
            userIDIndexMapping.put(dataset.getUserIDs().get(i), i);
        }
        for (int i = 0; i < dataset.getItemIDs().size(); i++) {
            itemIDIndexMapping.put(dataset.getItemIDs().get(i), i);
        }
        RatingMatrix trainRatingMatrix = new RatingMatrix(dataset.getUserIDs().size(),
                dataset.getItemIDs().size());
        for (int i = 0; i < trainRatings.size(); i++) {
            trainRatingMatrix.set(userIDIndexMapping.get(trainRatings.get(i).getUserID()),
                    itemIDIndexMapping.get(trainRatings.get(i).getItemID()), trainRatings.get(i).getValue());
        }
        trainRatingMatrix.calculateGlobalAverage();
        trainRatingMatrix.calculateItemsMean();
        RatingMatrix testRatingMatrix = new RatingMatrix(dataset.getUserIDs().size(),
                dataset.getItemIDs().size());
        for (int i = 0; i < testRatings.size(); i++) {
            testRatingMatrix.set(userIDIndexMapping.get(testRatings.get(i).getUserID()),
                    itemIDIndexMapping.get(testRatings.get(i).getItemID()), testRatings.get(i).getValue());
        }
        System.out.println("Training: " + trainRatingMatrix.getTotalRatingNumber() + " vs Test: "
                + testRatingMatrix.getTotalRatingNumber());
        logger.println("Initialize a item based collaborative filtering recommendation model.");
        ItemBasedCF algo = new ItemBasedCF(trainRatingMatrix);
        algo.setLogger(logger);
        algo.build();//if read local model, no need to build the model
        algo.saveModel(".//localModels//" + config.getString("NAME"));
        logger.println("Save the model.");
        logger.flush();

        //rating prediction accuracy
        double RMSE = 0;
        double MAE = 0;
        double precision = 0;
        double recall = 0;
        double map = 0;
        double ndcg = 0;
        double mrr = 0;
        double auc = 0;
        int count = 0;
        for (int i = 0; i < testRatings.size(); i++) {
            NumericRating rating = testRatings.get(i);
            double prediction = algo.predict(userIDIndexMapping.get(rating.getUserID()),
                    itemIDIndexMapping.get(rating.getItemID()), false);
            if (prediction > algo.getMaxRating())
                prediction = algo.getMaxRating();
            if (prediction < algo.getMinRating())
                prediction = algo.getMinRating();

            if (Double.isNaN(prediction)) {
                System.out.println("no prediction");
                continue;
            }
            MAE = MAE + Math.abs(rating.getValue() - prediction);
            RMSE = RMSE + Math.pow((rating.getValue() - prediction), 2);
            count++;
        }
        MAE = MAE / count;
        RMSE = Math.sqrt(RMSE / count);
        totalMAE = totalMAE + MAE;
        totalRMSE = totalRMSE + RMSE;
        System.out.println("Folder --- MAE: " + MAE + " RMSE: " + RMSE);
        logger.println(new SimpleDateFormat("yyyy-MM-dd HH:mm:ss").format(new Date()) + " Folder --- MAE: "
                + MAE + " RMSE: " + RMSE);

        //ranking accuracy
        if (algo.getTopN() > 0) {
            HashMap<Integer, ArrayList<ResultUnit>> results = new HashMap<Integer, ArrayList<ResultUnit>>();
            for (int i = 0; i < trainRatingMatrix.getRow(); i++) {
                //               ArrayList<ResultUnit> rec = algo.getRecommendationList(i);
                //               results.put(i, rec);
                ArrayList<ResultUnit> rec = algo.getRecommendationList(i);
                if (rec == null)
                    continue;
                int total = testRatingMatrix.getUserRatingNumber(i);
                if (total == 0)//this user is ignored
                    continue;
                results.put(i, rec);
            }
            RankResultGenerator generator = new RankResultGenerator(results, algo.getTopN(), testRatingMatrix,
                    trainRatingMatrix);
            precision = generator.getPrecisionN();
            totalPrecision = totalPrecision + precision;
            recall = generator.getRecallN();
            totalRecall = totalRecall + recall;
            map = generator.getMAPN();
            totalMAP = totalMAP + map;
            ndcg = generator.getNDCGN();
            totalNDCG = totalNDCG + ndcg;
            mrr = generator.getMRRN();
            totalMRR = totalMRR + mrr;
            auc = generator.getAUC();
            totalAUC = totalAUC + auc;
            System.out.println("Folder --- precision: " + precision + " recall: " + recall + " map: " + map
                    + " ndcg: " + ndcg + " mrr: " + mrr + " auc: " + auc);
            logger.append("Folder --- precision: " + precision + " recall: " + recall + " map: " + map
                    + " ndcg: " + ndcg + " mrr: " + mrr + " auc: " + auc + "\n");
        }
    }

    System.out.println("MAE: " + totalMAE / F + " RMSE: " + totalRMSE / F);
    System.out.println("Precision@N: " + totalPrecision / F);
    System.out.println("Recall@N: " + totalRecall / F);
    System.out.println("MAP@N: " + totalMAP / F);
    System.out.println("MRR@N: " + totalMRR / F);
    System.out.println("NDCG@N: " + totalNDCG / F);
    System.out.println("AUC@N: " + totalAUC / F);
    System.out.println("similarity: " + config.getString("SIMILARITY"));
    //MAE: 0.7227232762922241 RMSE: 0.9225576790122603 (MovieLens 100K, shrinkage 2500, neighbor size 40, PCC)
    //MAE: 0.7250636319353241 RMSE: 0.9242305485411567 (MovieLens 100K, shrinkage 25, neighbor size 40, PCC)
    //MAE: 0.7477213243604459 RMSE: 0.9512195004171138 (MovieLens 100K, shrinkage 2500, neighbor size 40, COSINE)

    logger.println(new SimpleDateFormat("yyyy-MM-dd HH:mm:ss").format(new Date()) + "\n" + "MAE: "
            + totalMAE / F + " RMSE: " + totalRMSE / F + "\n" + "Precision@N: " + totalPrecision / F + "\n"
            + "Recall@N: " + totalRecall / F + "\n" + "MAP@N: " + totalMAP / F + "\n" + "MRR@N: " + totalMRR / F
            + "\n" + "NDCG@N: " + totalNDCG / F + "\n" + "AUC@N: " + totalAUC / F);
    logger.flush();
    logger.close();
}

From source file:ch.epfl.lsir.xin.test.GlobalMeanTest.java

/**
 * @param args//from ww w.j a  v  a  2 s.  c om
 */
public static void main(String[] args) throws Exception {
    // TODO Auto-generated method stub

    PrintWriter logger = new PrintWriter(".//results//GlobalMean");

    PropertiesConfiguration config = new PropertiesConfiguration();
    config.setFile(new File("conf//GlobalMean.properties"));
    try {
        config.load();
    } catch (ConfigurationException e) {
        // TODO Auto-generated catch block
        e.printStackTrace();
    }

    logger.println(new SimpleDateFormat("yyyy-MM-dd HH:mm:ss").format(new Date()) + " Read rating data...");
    DataLoaderFile loader = new DataLoaderFile(".//data//MoveLens100k.txt");
    loader.readSimple();
    DataSetNumeric dataset = loader.getDataset();
    System.out.println("Number of ratings: " + dataset.getRatings().size() + " Number of users: "
            + dataset.getUserIDs().size() + " Number of items: " + dataset.getItemIDs().size());
    logger.println("Number of ratings: " + dataset.getRatings().size() + ", Number of users: "
            + dataset.getUserIDs().size() + ", Number of items: " + dataset.getItemIDs().size());

    double totalMAE = 0;
    double totalRMSE = 0;
    int F = 5;
    logger.println(F + "- folder cross validation.");
    logger.flush();
    ArrayList<ArrayList<NumericRating>> folders = new ArrayList<ArrayList<NumericRating>>();
    for (int i = 0; i < F; i++) {
        folders.add(new ArrayList<NumericRating>());
    }
    while (dataset.getRatings().size() > 0) {
        int index = new Random().nextInt(dataset.getRatings().size());
        int r = new Random().nextInt(F);
        folders.get(r).add(dataset.getRatings().get(index));
        dataset.getRatings().remove(index);
    }
    for (int folder = 1; folder <= F; folder++) {
        System.out.println("Folder: " + folder);
        logger.println("Folder: " + folder);
        ArrayList<NumericRating> trainRatings = new ArrayList<NumericRating>();
        ArrayList<NumericRating> testRatings = new ArrayList<NumericRating>();
        for (int i = 0; i < folders.size(); i++) {
            if (i == folder - 1)//test data
            {
                testRatings.addAll(folders.get(i));
            } else {//training data
                trainRatings.addAll(folders.get(i));
            }
        }

        //create rating matrix
        HashMap<String, Integer> userIDIndexMapping = new HashMap<String, Integer>();
        HashMap<String, Integer> itemIDIndexMapping = new HashMap<String, Integer>();
        for (int i = 0; i < dataset.getUserIDs().size(); i++) {
            userIDIndexMapping.put(dataset.getUserIDs().get(i), i);
        }
        for (int i = 0; i < dataset.getItemIDs().size(); i++) {
            itemIDIndexMapping.put(dataset.getItemIDs().get(i), i);
        }
        RatingMatrix trainRatingMatrix = new RatingMatrix(dataset.getUserIDs().size(),
                dataset.getItemIDs().size());
        for (int i = 0; i < trainRatings.size(); i++) {
            trainRatingMatrix.set(userIDIndexMapping.get(trainRatings.get(i).getUserID()),
                    itemIDIndexMapping.get(trainRatings.get(i).getItemID()), trainRatings.get(i).getValue());
        }
        RatingMatrix testRatingMatrix = new RatingMatrix(dataset.getUserIDs().size(),
                dataset.getItemIDs().size());
        for (int i = 0; i < testRatings.size(); i++) {
            testRatingMatrix.set(userIDIndexMapping.get(testRatings.get(i).getUserID()),
                    itemIDIndexMapping.get(testRatings.get(i).getItemID()), testRatings.get(i).getValue());
        }
        System.out.println("Training: " + trainRatingMatrix.getTotalRatingNumber() + " vs Test: "
                + testRatingMatrix.getTotalRatingNumber());

        logger.println("Initialize a recommendation model based on global average method.");
        GlobalAverage algo = new GlobalAverage(trainRatingMatrix);
        algo.setLogger(logger);
        algo.build();
        algo.saveModel(".//localModels//" + config.getString("NAME"));
        logger.println("Save the model.");
        logger.flush();

        System.out.println(trainRatings.size() + " vs. " + testRatings.size());

        double RMSE = 0;
        double MAE = 0;
        int count = 0;
        for (int i = 0; i < testRatings.size(); i++) {
            NumericRating rating = testRatings.get(i);
            double prediction = algo.predict(rating.getUserID(), rating.getItemID());
            if (Double.isNaN(prediction)) {
                System.out.println("no prediction");
                continue;
            }
            MAE = MAE + Math.abs(rating.getValue() - prediction);
            RMSE = RMSE + Math.pow((rating.getValue() - prediction), 2);
            count++;
        }
        MAE = MAE / count;
        RMSE = Math.sqrt(RMSE / count);

        //         System.out.println("MAE: " + MAE + " RMSE: " + RMSE);
        logger.println(new SimpleDateFormat("yyyy-MM-dd HH:mm:ss").format(new Date()) + " MAE: " + MAE
                + " RMSE: " + RMSE);
        logger.flush();
        totalMAE = totalMAE + MAE;
        totalRMSE = totalRMSE + RMSE;
    }

    System.out.println("MAE: " + totalMAE / F + " RMSE: " + totalRMSE / F);
    logger.println(new SimpleDateFormat("yyyy-MM-dd HH:mm:ss").format(new Date()) + " Final results: MAE: "
            + totalMAE / F + " RMSE: " + totalRMSE / F);
    logger.flush();
    logger.close();
    //MAE: 0.9338607074893257 RMSE: 1.1170971131112037 (MovieLens1M)
    //MAE: 0.9446876509332618 RMSE: 1.1256517870920375 (MovieLens100K)

}

From source file:ch.epfl.lsir.xin.test.UserBasedCFTest.java

/**
 * @param args/*from  w w w  .  ja v  a 2  s  . c  o m*/
 */
public static void main(String[] args) throws Exception {
    // TODO Auto-generated method stub

    PrintWriter logger = new PrintWriter(".//results//UserBasedCF");
    PropertiesConfiguration config = new PropertiesConfiguration();
    config.setFile(new File(".//conf//UserBasedCF.properties"));
    try {
        config.load();
    } catch (ConfigurationException e) {
        // TODO Auto-generated catch block
        e.printStackTrace();
    }

    logger.println(new SimpleDateFormat("yyyy-MM-dd HH:mm:ss").format(new Date()) + " Read rating data...");
    DataLoaderFile loader = new DataLoaderFile(".//data//MoveLens100k.txt");
    loader.readSimple();
    DataSetNumeric dataset = loader.getDataset();
    System.out.println("Number of ratings: " + dataset.getRatings().size() + " Number of users: "
            + dataset.getUserIDs().size() + " Number of items: " + dataset.getItemIDs().size());
    logger.println("Number of ratings: " + dataset.getRatings().size() + ", Number of users: "
            + dataset.getUserIDs().size() + ", Number of items: " + dataset.getItemIDs().size());
    logger.flush();

    double totalMAE = 0;
    double totalRMSE = 0;
    double totalPrecision = 0;
    double totalRecall = 0;
    double totalMAP = 0;
    double totalNDCG = 0;
    double totalMRR = 0;
    double totalAUC = 0;
    int F = 5;
    logger.println(F + "- folder cross validation.");
    ArrayList<ArrayList<NumericRating>> folders = new ArrayList<ArrayList<NumericRating>>();
    for (int i = 0; i < F; i++) {
        folders.add(new ArrayList<NumericRating>());
    }
    while (dataset.getRatings().size() > 0) {
        int index = new Random().nextInt(dataset.getRatings().size());
        int r = new Random().nextInt(F);
        folders.get(r).add(dataset.getRatings().get(index));
        dataset.getRatings().remove(index);
    }

    for (int folder = 1; folder <= F; folder++) {
        logger.println("Folder: " + folder);
        System.out.println("Folder: " + folder);
        ArrayList<NumericRating> trainRatings = new ArrayList<NumericRating>();
        ArrayList<NumericRating> testRatings = new ArrayList<NumericRating>();
        for (int i = 0; i < folders.size(); i++) {
            if (i == folder - 1)//test data
            {
                testRatings.addAll(folders.get(i));
            } else {//training data
                trainRatings.addAll(folders.get(i));
            }
        }

        //create rating matrix
        HashMap<String, Integer> userIDIndexMapping = new HashMap<String, Integer>();
        HashMap<String, Integer> itemIDIndexMapping = new HashMap<String, Integer>();
        for (int i = 0; i < dataset.getUserIDs().size(); i++) {
            userIDIndexMapping.put(dataset.getUserIDs().get(i), i);
        }
        for (int i = 0; i < dataset.getItemIDs().size(); i++) {
            itemIDIndexMapping.put(dataset.getItemIDs().get(i), i);
        }
        RatingMatrix trainRatingMatrix = new RatingMatrix(dataset.getUserIDs().size(),
                dataset.getItemIDs().size());
        for (int i = 0; i < trainRatings.size(); i++) {
            trainRatingMatrix.set(userIDIndexMapping.get(trainRatings.get(i).getUserID()),
                    itemIDIndexMapping.get(trainRatings.get(i).getItemID()), trainRatings.get(i).getValue());
        }
        trainRatingMatrix.calculateGlobalAverage();
        trainRatingMatrix.calculateUsersMean();
        RatingMatrix testRatingMatrix = new RatingMatrix(dataset.getUserIDs().size(),
                dataset.getItemIDs().size());
        for (int i = 0; i < testRatings.size(); i++) {
            //            if( testRatings.get(i).getValue() < 5 )
            //               continue;
            testRatingMatrix.set(userIDIndexMapping.get(testRatings.get(i).getUserID()),
                    itemIDIndexMapping.get(testRatings.get(i).getItemID()), testRatings.get(i).getValue());
        }
        logger.println("Initialize a user based collaborative filtering recommendation model.");
        UserBasedCF algo = new UserBasedCF(trainRatingMatrix, false,
                ".//localModels//" + config.getString("NAME"));
        algo.setLogger(logger);
        algo.build();//if read local model, no need to build the model
        algo.saveModel(".//localModels//" + config.getString("NAME"));
        logger.println("Save the model.");
        System.out.println(trainRatings.size() + " vs. " + testRatings.size());
        logger.flush();

        //rating prediction accuracy
        double RMSE = 0;
        double MAE = 0;
        double precision = 0;
        double recall = 0;
        double map = 0;
        double ndcg = 0;
        double mrr = 0;
        double auc = 0;
        int count = 0;
        for (int i = 0; i < testRatings.size(); i++) {
            NumericRating rating = testRatings.get(i);
            double prediction = algo.predict(userIDIndexMapping.get(rating.getUserID()),
                    itemIDIndexMapping.get(rating.getItemID()), false);

            if (Double.isNaN(prediction)) {
                System.out.println("no prediction");
                continue;
            }
            if (prediction > algo.getMaxRating())
                prediction = algo.getMaxRating();
            if (prediction < algo.getMinRating())
                prediction = algo.getMinRating();
            MAE = MAE + Math.abs(rating.getValue() - prediction);
            RMSE = RMSE + Math.pow((rating.getValue() - prediction), 2);
            count++;
        }
        MAE = MAE / count;
        RMSE = Math.sqrt(RMSE / count);
        totalMAE = totalMAE + MAE;
        totalRMSE = totalRMSE + RMSE;
        System.out.println("Folder --- MAE: " + MAE + " RMSE: " + RMSE);
        logger.println(new SimpleDateFormat("yyyy-MM-dd HH:mm:ss").format(new Date()) + " Folder --- MAE: "
                + MAE + " RMSE: " + RMSE);
        logger.flush();
        //ranking accuracy
        if (algo.getTopN() > 0) {
            HashMap<Integer, ArrayList<ResultUnit>> results = new HashMap<Integer, ArrayList<ResultUnit>>();
            for (int i = 0; i < testRatingMatrix.getRow(); i++) {
                ArrayList<ResultUnit> rec = algo.getRecommendationList(i);
                if (rec == null)
                    continue;
                int total = testRatingMatrix.getUserRatingNumber(i);
                if (total == 0)//this user is ignored
                    continue;
                results.put(i, rec);
                //               for( Map.Entry<Integer, Double> entry : testRatingMatrix.getRatingMatrix().get(i).entrySet() )
                //               {
                //                  System.out.print( entry.getKey() + "(" + entry.getValue() + ") , ");
                //               }
                //               System.out.println();
                //               for( int j = 0 ; j < rec.size() ; j++ )
                //               {
                //                  System.out.print(rec.get(j).getItemIndex() + "(" + rec.get(j).getPrediciton() +
                //                        ") , ");
                //               }
                //               System.out.println("**********");
            }
            RankResultGenerator generator = new RankResultGenerator(results, algo.getTopN(), testRatingMatrix,
                    trainRatingMatrix);
            precision = generator.getPrecisionN();
            totalPrecision = totalPrecision + precision;
            recall = generator.getRecallN();
            totalRecall = totalRecall + recall;
            map = generator.getMAPN();
            totalMAP = totalMAP + map;
            ndcg = generator.getNDCGN();
            totalNDCG = totalNDCG + ndcg;
            mrr = generator.getMRRN();
            totalMRR = totalMRR + mrr;
            auc = generator.getAUC();
            totalAUC = totalAUC + auc;
            System.out.println("Folder --- precision: " + precision + " recall: " + recall + " map: " + map
                    + " ndcg: " + ndcg + " mrr: " + mrr + " auc: " + auc);
            logger.println("Folder --- precision: " + precision + " recall: " + recall + " map: " + map
                    + " ndcg: " + ndcg + " mrr: " + mrr + " auc: " + auc);
        }
    }

    System.out.println("MAE: " + totalMAE / F + " RMSE: " + totalRMSE / F);
    System.out.println("Precision@N: " + totalPrecision / F);
    System.out.println("Recall@N: " + totalRecall / F);
    System.out.println("MAP@N: " + totalMAP / F);
    System.out.println("MRR@N: " + totalMRR / F);
    System.out.println("NDCG@N: " + totalNDCG / F);
    System.out.println("AUC@N: " + totalAUC / F);
    // MovieLens100k
    //MAE: 0.7343907480119425 RMSE: 0.9405808357192891 (MovieLens 100K, shrinkage 25, neighbor size 60, PCC)
    //MAE: 0.7522376630596646 RMSE: 0.9520931265724659 (MovieLens 100K, no shrinkage , neighbor size 40, COSINE)
    logger.println(new SimpleDateFormat("yyyy-MM-dd HH:mm:ss").format(new Date()) + "\n" + "MAE: "
            + totalMAE / F + " RMSE: " + totalRMSE / F + "\n" + "Precision@N: " + totalPrecision / F + "\n"
            + "Recall@N: " + totalRecall / F + "\n" + "MAP@N: " + totalMAP / F + "\n" + "MRR@N: " + totalMRR / F
            + "\n" + "NDCG@N: " + totalNDCG / F + "\n" + "AUC@N: " + totalAUC / F);
    logger.flush();
    logger.close();

}

From source file:AndroidUninstallStock.java

@SuppressWarnings("static-access")
public static void main(String[] args) {
    try {/*from www.jav a  2 s .  c  o  m*/
        String lang = Locale.getDefault().getLanguage();
        GnuParser cmdparser = new GnuParser();
        Options cmdopts = new Options();
        for (String fld : Arrays.asList("shortOpts", "longOpts", "optionGroups")) {
            // hack for printOptions
            java.lang.reflect.Field fieldopt = cmdopts.getClass().getDeclaredField(fld);
            fieldopt.setAccessible(true);
            fieldopt.set(cmdopts, new LinkedHashMap<>());
        }
        cmdopts.addOption("h", "help", false, "Help");
        cmdopts.addOption("t", "test", false, "Show only report");
        cmdopts.addOption(OptionBuilder.withLongOpt("adb").withArgName("file").hasArg()
                .withDescription("Path to ADB from Android SDK").create("a"));
        cmdopts.addOption(OptionBuilder.withLongOpt("dev").withArgName("device").hasArg()
                .withDescription("Select device (\"adb devices\")").create("d"));
        cmdopts.addOption(null, "restore", false,
                "If packages have not yet removed and are disabled, " + "you can activate them again");
        cmdopts.addOption(null, "google", false, "Delete packages are in the Google section");
        cmdopts.addOption(null, "unapk", false, "Delete /system/app/ *.apk *.odex *.dex"
                + System.lineSeparator() + "(It is required to repeat command execution)");
        cmdopts.addOption(null, "unlib", false, "Delete /system/lib/[libs in apk]");
        //cmdopts.addOption(null, "unfrw", false, "Delete /system/framework/ (special list)");
        cmdopts.addOption(null, "scanlibs", false,
                "(Dangerous!) Include all the libraries of selected packages." + " Use with --unlib");

        cmdopts.addOptionGroup(new OptionGroup() {
            {
                addOption(OptionBuilder.withLongOpt("genfile").withArgName("file").hasArg().isRequired()
                        .withDescription("Create file with list packages").create());
                addOption(OptionBuilder.withLongOpt("lang").withArgName("ISO 639").hasArg().create());
            }
        });
        cmdopts.getOption("lang").setDescription(
                "See hl= in Google URL (default: " + lang + ") " + "for description from Google Play Market");
        CommandLine cmd = cmdparser.parse(cmdopts, args);

        if (args.length == 0 || cmd.hasOption("help")) {
            PrintWriter console = new PrintWriter(System.out);
            HelpFormatter cmdhelp = new HelpFormatter();
            cmdhelp.setOptionComparator(new Comparator<Option>() {
                @Override
                public int compare(Option o1, Option o2) {
                    return 0;
                }
            });
            console.println("WARNING: Before use make a backup with ClockworkMod Recovery!");
            console.println();
            console.println("AndroidUninstallStock [options] [AndroidListSoft.xml]");
            cmdhelp.printOptions(console, 80, cmdopts, 3, 2);
            console.flush();
            return;
        }

        String adb = cmd.getOptionValue("adb", "adb");
        try {
            run(adb, "start-server");
        } catch (IOException e) {
            System.out.println("Error: Not found ADB! Use -a or --adb");
            return;
        }

        final boolean NotTest = !cmd.hasOption("test");

        String deverror = getDeviceStatus(adb, cmd.getOptionValue("dev"));
        if (!deverror.isEmpty()) {
            System.out.println(deverror);
            return;
        }

        System.out.println("Getting list packages:");
        LinkedHashMap<String, String> apklist = new LinkedHashMap<String, String>();
        for (String ln : run(adb, "-s", lastdevice, "shell", "pm list packages -s -f")) {
            // "pm list packages" give list sorted by packages ;)
            String pckg = ln.substring("package:".length());
            String pckgname = ln.substring(ln.lastIndexOf('=') + 1);
            pckg = pckg.substring(0, pckg.length() - pckgname.length() - 1);
            if (!pckgname.equals("android") && !pckgname.equals("com.android.vending")/*Google Play Market*/) {
                apklist.put(pckg, pckgname);
            }
        }
        for (String ln : run(adb, "-s", lastdevice, "shell", "ls /system/app/")) {
            String path = "/system/app/" + ln.replace(".odex", ".apk").replace(".dex", ".apk");
            if (!apklist.containsKey(path)) {
                apklist.put(path, "");
            }
        }
        apklist.remove("/system/app/mcRegistry");
        for (Map.Entry<String, String> info : sortByValues(apklist).entrySet()) {
            System.out.println(info.getValue() + " = " + info.getKey());
        }

        String genfile = cmd.getOptionValue("genfile");
        if (genfile != null) {
            Path genpath = Paths.get(genfile);
            try (BufferedWriter gen = Files.newBufferedWriter(genpath, StandardCharsets.UTF_8,
                    new StandardOpenOption[] { StandardOpenOption.CREATE, StandardOpenOption.TRUNCATE_EXISTING,
                            StandardOpenOption.WRITE })) {
                if (cmd.getOptionValue("lang") != null) {
                    lang = cmd.getOptionValue("lang");
                }

                LinkedHashSet<String> listsystem = new LinkedHashSet<String>() {
                    {
                        add("com.android");
                        add("com.google.android");
                        //add("com.sec.android.app");
                        add("com.monotype.android");
                        add("eu.chainfire.supersu");
                    }
                };

                // \r\n for Windows Notepad
                gen.write("<?xml version=\"1.0\" encoding=\"UTF-8\"?>\r\n");
                gen.write("<!-- & raplace with &amp; or use <![CDATA[ ]]> -->\r\n");
                gen.write("<AndroidUninstallStock>\r\n\r\n");
                gen.write("<Normal>\r\n");
                System.out.println();
                System.out.println("\tNormal:");
                writeInfo(gen, apklist, lang, listsystem, true);
                gen.write("\t<apk name=\"Exclude Google and etc\">\r\n");
                for (String exc : listsystem) {
                    gen.write("\t\t<exclude global=\"true\" in=\"package\" pattern=\"" + exc + "\" />\r\n");
                }
                gen.write("\t</apk>\r\n");
                gen.write("</Normal>\r\n\r\n");
                gen.write("<Google>\r\n");
                System.out.println();
                System.out.println("\tGoogle:");
                writeInfo(gen, apklist, lang, listsystem, false);
                gen.write("</Google>\r\n\r\n");
                gen.write("</AndroidUninstallStock>\r\n");
                System.out.println("File " + genpath.toAbsolutePath() + " created.");
            }
            return;
        }

        String[] FileName = cmd.getArgs();
        if (!(FileName.length > 0 && Files.isReadable(Paths.get(FileName[0])))) {
            System.out.println("Error: File " + FileName[0] + " not found!");
            return;
        }

        DocumentBuilderFactory xmlfactory = getXmlDocFactory();

        // DocumentBuilder.setErrorHandler() for print errors
        Document xml = xmlfactory.newDocumentBuilder().parse(new File(FileName[0]));

        LinkedList<AusInfo> Normal = new LinkedList<AusInfo>();
        LinkedList<AusInfo> Google = new LinkedList<AusInfo>();

        NodeList ndaus = xml.getElementsByTagName("AndroidUninstallStock").item(0).getChildNodes();
        for (int ndausx = 0, ndausc = ndaus.getLength(); ndausx < ndausc; ndausx++) {
            Node ndnow = ndaus.item(ndausx);
            NodeList nd = ndnow.getChildNodes();
            String ndname = ndnow.getNodeName();
            for (int ndx = 0, ndc = nd.getLength(); ndx < ndc; ndx++) {
                if (!nd.item(ndx).getNodeName().equalsIgnoreCase("apk")) {
                    continue;
                }
                if (ndname.equalsIgnoreCase("Normal")) {
                    Normal.add(getApkInfo(nd.item(ndx)));
                } else if (ndname.equalsIgnoreCase("Google")) {
                    Google.add(getApkInfo(nd.item(ndx)));
                }
            }
        }

        // FIXME This part must be repeated until the "pm uninstall" will not issue "Failure" on all packages.
        //       Now requires a restart.
        System.out.println();
        System.out.println("Include and Exclude packages (Normal):");
        LinkedHashMap<String, String> apkNormal = getApkFromPattern(apklist, Normal, false);
        System.out.println();
        System.out.println("Global Exclude packages (Normal):");
        apkNormal = getApkFromPattern(apkNormal, Normal, true);
        System.out.println();
        System.out.println("Final list packages (Normal):");
        for (Map.Entry<String, String> info : sortByValues(apkNormal).entrySet()) {
            System.out.println(info.getValue() + " = " + info.getKey());
        }

        LinkedHashMap<String, String> apkGoogle = new LinkedHashMap<String, String>();
        if (cmd.hasOption("google")) {
            System.out.println();
            System.out.println("Include and Exclude packages (Google):");
            apkGoogle = getApkFromPattern(apklist, Google, false);
            System.out.println();
            System.out.println("Global Exclude packages (Google):");
            apkGoogle = getApkFromPattern(apkGoogle, Google, true);
            System.out.println();
            System.out.println("Final list packages (Google):");
            for (Map.Entry<String, String> info : sortByValues(apkGoogle).entrySet()) {
                System.out.println(info.getValue() + " = " + info.getKey());
            }
        }

        if (NotTest) {
            if (!hasRoot(adb)) {
                System.out.println("No Root");
                System.out.println();
                System.out.println("FINISH :)");
                return;
            }
        }

        if (cmd.hasOption("restore")) {
            System.out.println();
            System.out.println("Enable (Restore) packages (Normal):");
            damage(adb, "pm enable ", NotTest, apkNormal, 2);
            if (cmd.hasOption("google")) {
                System.out.println();
                System.out.println("Enable (Restore) packages (Google):");
                damage(adb, "pm enable ", NotTest, apkGoogle, 2);
            }
            System.out.println();
            System.out.println("FINISH :)");
            return;
        } else {
            System.out.println();
            System.out.println("Disable packages (Normal):");
            damage(adb, "pm disable ", NotTest, apkNormal, 2);
            if (cmd.hasOption("google")) {
                System.out.println();
                System.out.println("Disable packages (Google):");
                damage(adb, "pm disable ", NotTest, apkGoogle, 2);
            }
        }

        if (!cmd.hasOption("unapk") && !cmd.hasOption("unlib")) {
            System.out.println();
            System.out.println("FINISH :)");
            return;
        }

        // Reboot now not needed
        /*if (NotTest) {
        reboot(adb, "-s", lastdevice, "reboot");
        if (!hasRoot(adb)) {
            System.out.println("No Root");
            System.out.println();
            System.out.println("FINISH :)");
            return;
        }
        }*/

        if (cmd.hasOption("unlib")) {
            // "find" not found
            System.out.println();
            System.out.println("Getting list libraries:");
            LinkedList<String> liblist = new LinkedList<String>();
            liblist.addAll(run(adb, "-s", lastdevice, "shell", "ls -l /system/lib/"));
            String dircur = "/system/lib/";
            for (int x = 0; x < liblist.size(); x++) {
                if (liblist.get(x).startsWith("scan:")) {
                    dircur = liblist.get(x).substring("scan:".length());
                    liblist.remove(x);
                    x--;
                } else if (liblist.get(x).startsWith("d")) {
                    String dir = liblist.get(x).substring(liblist.get(x).lastIndexOf(':') + 4) + "/";
                    liblist.remove(x);
                    x--;
                    liblist.add("scan:/system/lib/" + dir);
                    liblist.addAll(run(adb, "-s", lastdevice, "shell", "ls -l /system/lib/" + dir));
                    continue;
                }
                liblist.set(x, dircur + liblist.get(x).substring(liblist.get(x).lastIndexOf(':') + 4));
                System.out.println(liblist.get(x));
            }

            final boolean scanlibs = cmd.hasOption("scanlibs");
            LinkedHashMap<String, String> libNormal = getLibFromPatternInclude(adb, liblist, apkNormal, Normal,
                    "Normal", scanlibs);
            libNormal = getLibFromPatternGlobalExclude(libNormal, Normal, "Normal");
            System.out.println();
            System.out.println("Final list libraries (Normal):");
            for (Map.Entry<String, String> info : sortByValues(libNormal).entrySet()) {
                System.out.println(info.getKey() + " = " + info.getValue());
            }

            LinkedHashMap<String, String> libGoogle = new LinkedHashMap<String, String>();
            if (cmd.hasOption("google")) {
                libGoogle = getLibFromPatternInclude(adb, liblist, apkGoogle, Google, "Google", scanlibs);
                libGoogle = getLibFromPatternGlobalExclude(libGoogle, Google, "Google");
                System.out.println();
                System.out.println("Final list libraries (Google):");
                for (Map.Entry<String, String> info : sortByValues(libGoogle).entrySet()) {
                    System.out.println(info.getKey() + " = " + info.getValue());
                }
            }

            LinkedHashMap<String, String> apkExclude = new LinkedHashMap<String, String>(apklist);
            for (String key : apkNormal.keySet()) {
                apkExclude.remove(key);
            }
            for (String key : apkGoogle.keySet()) {
                apkExclude.remove(key);
            }

            System.out.println();
            System.out.println("Include libraries from Exclude packages:");
            LinkedHashMap<String, String> libExclude = getLibFromPackage(adb, liblist, apkExclude);
            System.out.println();
            System.out.println("Enclude libraries from Exclude packages (Normal):");
            for (Map.Entry<String, String> info : sortByValues(libNormal).entrySet()) {
                if (libExclude.containsKey(info.getKey())) {
                    System.out.println("exclude: " + info.getKey() + " = " + libExclude.get(info.getKey()));
                    libNormal.remove(info.getKey());
                }
            }
            System.out.println();
            System.out.println("Enclude libraries from Exclude packages (Google):");
            for (Map.Entry<String, String> info : sortByValues(libGoogle).entrySet()) {
                if (libExclude.containsKey(info.getKey())) {
                    System.out.println("exclude: " + info.getKey() + " = " + libExclude.get(info.getKey()));
                    libGoogle.remove(info.getKey());
                }
            }

            System.out.println();
            System.out.println("Delete libraries (Normal):");
            damage(adb, "rm ", NotTest, libNormal, 1);
            if (cmd.hasOption("google")) {
                System.out.println();
                System.out.println("Delete libraries (Google):");
                damage(adb, "rm ", NotTest, libGoogle, 1);
            }
        }

        if (cmd.hasOption("unapk")) {
            System.out.println();
            System.out.println("Cleaning data packages (Normal):");
            damage(adb, "pm clear ", NotTest, apkNormal, 2);
            if (cmd.hasOption("google")) {
                System.out.println();
                System.out.println("Cleaning data packages (Google):");
                damage(adb, "pm clear ", NotTest, apkGoogle, 2);
            }

            System.out.println();
            System.out.println("Uninstall packages (Normal):");
            damage(adb, "pm uninstall ", NotTest, apkNormal, 2);
            if (cmd.hasOption("google")) {
                System.out.println();
                System.out.println("Uninstall packages (Google):");
                damage(adb, "pm uninstall ", NotTest, apkGoogle, 2);
            }
        }

        if (cmd.hasOption("unapk")) {
            System.out.println();
            System.out.println("Delete packages (Normal):");
            LinkedHashMap<String, String> dexNormal = new LinkedHashMap<String, String>();
            for (Map.Entry<String, String> apk : apkNormal.entrySet()) {
                dexNormal.put(apk.getKey(), apk.getValue());
                dexNormal.put(apk.getKey().replace(".apk", ".dex"), apk.getValue());
                dexNormal.put(apk.getKey().replace(".apk", ".odex"), apk.getValue());
            }
            damage(adb, "rm ", NotTest, dexNormal, 1);
            if (cmd.hasOption("google")) {
                System.out.println();
                System.out.println("Delete packages (Google):");
                LinkedHashMap<String, String> dexGoogle = new LinkedHashMap<String, String>();
                for (Map.Entry<String, String> apk : apkGoogle.entrySet()) {
                    dexGoogle.put(apk.getKey(), apk.getValue());
                    dexGoogle.put(apk.getKey().replace(".apk", ".dex"), apk.getValue());
                    dexGoogle.put(apk.getKey().replace(".apk", ".odex"), apk.getValue());
                }
                damage(adb, "rm ", NotTest, dexGoogle, 1);
            }
        }

        if (NotTest) {
            run(adb, "-s", lastdevice, "reboot");
        }
        System.out.println();
        System.out.println("FINISH :)");
    } catch (SAXException e) {
        System.out.println("Error parsing list: " + e);
    } catch (Throwable e) {
        e.printStackTrace();
    }
}

From source file:com.metadave.eql.EQLConsole.java

public static void main(String[] args) throws IOException {
    CommandLine commandLine = processArgs(args);
    ConsoleReader reader = new ConsoleReader();
    reader.setBellEnabled(false);//from  w  w  w  . ja  v a 2 s.  com
    reader.setExpandEvents(false); // TODO: look into this
    // TODO: Pasting in text with tabs prints out a ton of completions
    //reader.addCompleter(new jline.console.completer.StringsCompleter(keywords));

    String line;
    PrintWriter out = new PrintWriter(System.out);

    RuntimeContext ctx = new RuntimeContext();
    if (!commandLine.hasOption("nosignals")) {
        ConsoleSignalHander.install("INT", ctx);
    }

    boolean nextLinePrompt = false;

    ANSIBuffer buf = new ANSIBuffer();
    buf.setAnsiEnabled(!commandLine.hasOption("nocolor"));
    buf.blue("Welcome to EQL\n");
    buf.blue("(c) 2015 Dave Parfitt\n");
    System.out.println(buf.toString());

    if (!commandLine.hasOption("noconfig")) {
        String config = null;
        try {
            config = readConfig();
        } catch (Exception e) {
            e.printStackTrace();
        }
        if (config != null && !config.trim().isEmpty()) {
            processInput(config, ctx);
            processOutput(ctx, out, !commandLine.hasOption("nocolor"));
        }
    }

    //        if (commandLine.hasOption("infile")) {
    //            String filename = commandLine.getOptionValue("infile");
    //            readInputFile(filename, ctx);
    //            ctx.getActionListener().term();
    //            System.exit(0);
    //        }

    StringBuffer lines = new StringBuffer();
    ANSIBuffer ansiprompt = new ANSIBuffer();
    ansiprompt.setAnsiEnabled(true);
    ansiprompt.green("> ");
    String prompt = ansiprompt.toString(!commandLine.hasOption("nocolor"));
    boolean inHereDoc = false;

    while ((line = reader.readLine(nextLinePrompt ? "" : prompt)) != null) {
        out.flush();
        String chunks[] = line.split(" ");
        String consoleCommandCheck = chunks[0].toLowerCase().trim();
        if (consoleOnlyCommands.containsKey(consoleCommandCheck)) {
            consoleOnlyCommands.get(consoleCommandCheck).run(line, reader);
            continue;
        }

        if (line.contains("~%~") && !line.contains("\\~%~")) {
            inHereDoc = !inHereDoc;
        }

        if (!line.trim().endsWith(";")) {
            nextLinePrompt = true;
            lines.append(line);
            lines.append("\n");
        } else if (line.trim().endsWith(";") && !inHereDoc) {
            lines.append(line);
            String input = lines.toString();
            nextLinePrompt = false;
            processInput(input, ctx);
            processOutput(ctx, out, !commandLine.hasOption("nocolor"));
            lines = new StringBuffer();
        } else if (inHereDoc) {
            lines.append(line);
            lines.append("\n");
        }

    }
}

From source file:com.metadave.kash.KashConsole.java

public static void main(String[] args) throws IOException {
    CommandLine commandLine = processArgs(args);
    ConsoleReader reader = new ConsoleReader();
    reader.setBellEnabled(false);//from  w  ww . j  a  va 2  s  .  c  om
    reader.setExpandEvents(false); // TODO: look into this
    // TODO: Pasting in text with tabs prints out a ton of completions
    //reader.addCompleter(new jline.console.completer.StringsCompleter(keywords));

    String line;
    PrintWriter out = new PrintWriter(System.out);

    KashRuntimeContext ctx = new KashRuntimeContext();
    if (!commandLine.hasOption("nosignals")) {
        ConsoleSignalHander.install("INT", ctx);
    }

    boolean nextLinePrompt = false;

    ANSIBuffer buf = new ANSIBuffer();
    buf.setAnsiEnabled(!commandLine.hasOption("nocolor"));
    buf.blue("Welcome to Kash\n");
    buf.blue("(c) 2015 Dave Parfitt\n");
    System.out.println(buf.toString());

    if (!commandLine.hasOption("noconfig")) {
        String config = null;
        try {
            config = readConfig();
        } catch (Exception e) {
            e.printStackTrace();
        }
        if (config != null && !config.trim().isEmpty()) {
            processInput(config, ctx);
            processOutput(ctx, out, !commandLine.hasOption("nocolor"));
        }
    }

    //        if (commandLine.hasOption("infile")) {
    //            String filename = commandLine.getOptionValue("infile");
    //            readInputFile(filename, ctx);
    //            ctx.getActionListener().term();
    //            System.exit(0);
    //        }

    StringBuffer lines = new StringBuffer();
    ANSIBuffer ansiprompt = new ANSIBuffer();
    ansiprompt.setAnsiEnabled(true);
    ansiprompt.green("> ");
    String prompt = ansiprompt.toString(!commandLine.hasOption("nocolor"));
    boolean inHereDoc = false;

    while ((line = reader.readLine(nextLinePrompt ? "" : prompt)) != null) {
        out.flush();
        String chunks[] = line.split(" ");
        String consoleCommandCheck = chunks[0].toLowerCase().trim();
        if (consoleOnlyCommands.containsKey(consoleCommandCheck)) {
            consoleOnlyCommands.get(consoleCommandCheck).run(line, reader);
            continue;
        }

        if (line.contains("~%~") && !line.contains("\\~%~")) {
            inHereDoc = !inHereDoc;
        }

        if (!line.trim().endsWith(";")) {
            nextLinePrompt = true;
            lines.append(line);
            lines.append("\n");
        } else if (line.trim().endsWith(";") && !inHereDoc) {
            lines.append(line);
            String input = lines.toString();
            nextLinePrompt = false;
            processInput(input, ctx);
            processOutput(ctx, out, !commandLine.hasOption("nocolor"));
            lines = new StringBuffer();
        } else if (inHereDoc) {
            lines.append(line);
            lines.append("\n");
        }

    }
}

From source file:edu.usc.qufd.Main.java

/**
 * The main method./*from w  w  w  .j  a  v a  2s  .  c  o  m*/
 *
 * @param args the arguments
 * @throws IOException Signals that an I/O exception has occurred.
 */
public static void main(String[] args) throws IOException {
    if (parseInputs(args) == false) {
        System.exit(-1); //The input files do not exist
    }

    /*
     * Parsing inputs: fabric & qasm file
     */
    PrintWriter outputFile;
    RandomAccessFile raf = null;
    String latencyPlaceHolder;
    if (RuntimeConfig.OUTPUT_TO_FILE) {
        latencyPlaceHolder = "Total Latency: " + Long.MAX_VALUE + " us" + System.lineSeparator();
        raf = new RandomAccessFile(outputFileAddr, "rws");
        //removing the old values in the file
        raf.setLength(0);
        //writing a place holder for the total latency
        raf.writeBytes(latencyPlaceHolder);
        raf.close();

        outputFile = new PrintWriter(new BufferedWriter(new FileWriter(outputFileAddr, true)), true);
    } else { //writing to stdout
        outputFile = new PrintWriter(new BufferedWriter(new OutputStreamWriter(System.out)), true);
    }
    /* parsing the input*/
    layout = LayoutParser.parse(pmdFileAddr);
    qasm = QASMParser.QASMParser(qasmFileAddr, layout);

    long totalLatency = qufd(outputFile);

    if (RuntimeConfig.OUTPUT_TO_FILE) {
        outputFile.close();
        //Over writing the place holder with the actual latency
        String latencyActual = "Total Latency: " + totalLatency + " " + layout.getTimeUnit();
        latencyActual = StringUtils.rightPad(latencyActual,
                latencyPlaceHolder.length() - System.lineSeparator().length());
        raf = new RandomAccessFile(outputFileAddr, "rws");
        //Writing to the top of a file
        raf.seek(0);
        //writing the actual total latency in the at the top of the output file
        raf.writeBytes(latencyActual + System.lineSeparator());
        raf.close();
    } else {
        outputFile.flush();
        System.out.println("Total Latency: " + totalLatency + " " + layout.getTimeUnit());
    }

    if (RuntimeConfig.VERBOSE) {
        System.out.println("Done.");
    }
    outputFile.close();
}