org.cloudata.core.common.io.CWritableUtils.java Source code

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/**
 * Licensed to the Apache Software Foundation (ASF) under one
 * or more contributor license agreements.  See the NOTICE file
 * distributed with this work for additional information
 * regarding copyright ownership.  The ASF licenses this file
 * to you under the Apache License, Version 2.0 (the
 * "License"); you may not use this file except in compliance
 * with the License.  You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */

package org.cloudata.core.common.io;

import java.io.ByteArrayInputStream;
import java.io.ByteArrayOutputStream;
import java.io.DataInput;
import java.io.DataOutput;
import java.io.IOException;
import java.util.zip.GZIPInputStream;
import java.util.zip.GZIPOutputStream;

import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.cloudata.core.common.conf.CloudataConf;
import org.cloudata.core.common.util.ReflectionUtils;

public final class CWritableUtils {
    public static final Log LOG = LogFactory.getLog(CWritableUtils.class.getName());

    public static byte[] readCompressedByteArray(DataInput in) throws IOException {
        int length = in.readInt();
        if (length == -1)
            return null;
        byte[] buffer = new byte[length];
        in.readFully(buffer); // could/should use readFully(buffer,0,length)?
        GZIPInputStream gzi = new GZIPInputStream(new ByteArrayInputStream(buffer, 0, buffer.length));
        byte[] outbuf = new byte[length];
        ByteArrayOutputStream bos = new ByteArrayOutputStream();
        int len;
        while ((len = gzi.read(outbuf, 0, outbuf.length)) != -1) {
            bos.write(outbuf, 0, len);
        }
        byte[] decompressed = bos.toByteArray();
        bos.close();
        gzi.close();
        return decompressed;
    }

    public static void skipCompressedByteArray(DataInput in) throws IOException {
        int length = in.readInt();
        if (length != -1) {
            skipFully(in, length);
        }
    }

    public static int writeCompressedByteArray(DataOutput out, byte[] bytes) throws IOException {
        if (bytes != null) {
            ByteArrayOutputStream bos = new ByteArrayOutputStream();
            GZIPOutputStream gzout = new GZIPOutputStream(bos);
            gzout.write(bytes, 0, bytes.length);
            gzout.close();
            byte[] buffer = bos.toByteArray();
            int len = buffer.length;
            out.writeInt(len);
            out.write(buffer, 0, len);
            /* debug only! Once we have confidence, can lose this. */
            return ((bytes.length != 0) ? (100 * buffer.length) / bytes.length : 0);
        } else {
            out.writeInt(-1);
            return -1;
        }
    }

    /* Ugly utility, maybe someone else can do this better  */
    public static String readCompressedString(DataInput in) throws IOException {
        byte[] bytes = readCompressedByteArray(in);
        if (bytes == null)
            return null;
        return new String(bytes, "UTF-8");
    }

    public static int writeCompressedString(DataOutput out, String s) throws IOException {
        return writeCompressedByteArray(out, (s != null) ? s.getBytes("UTF-8") : null);
    }

    /*
     *
     * Write a String as a Network Int n, followed by n Bytes
     * Alternative to 16 bit read/writeUTF.
     * Encoding standard is... ?
     * 
     */
    public static int writeString(DataOutput out, String s) throws IOException {
        if (s != null) {
            byte[] buffer = s.getBytes("UTF-8");
            int len = buffer.length;
            out.writeInt(len);
            out.write(buffer, 0, len);
            return CWritableUtils.getIntByteSize() + len;
        } else {
            out.writeInt(-1);
            return CWritableUtils.getIntByteSize();
        }
    }

    /*
     * Read a String as a Network Int n, followed by n Bytes
     * Alternative to 16 bit read/writeUTF.
     * Encoding standard is... ?
     *
     */
    public static String readString(DataInput in) throws IOException {
        int length = in.readInt();
        if (length > 1024 * 1024 * 5) {
            LOG.error("too long String length: " + length);
            Thread.dumpStack();
            throw new IOException("WritableUtils.readString: too long String length: " + length);
        }
        if (length == -1)
            return null;
        byte[] buffer = new byte[length];
        //long time1 = System.currentTimeMillis();
        in.readFully(buffer); // could/should use readFully(buffer,0,length)?
        //long time2 = System.currentTimeMillis();
        String result = new String(buffer, "UTF-8");
        //long time3 = System.currentTimeMillis();
        //System.out.println("readString:" + (time2-time1) + "," + (time3-time1));
        return result;
    }

    public static String readString(DataInput in, int maxLength) throws IOException {
        int length = in.readInt();
        if (length > maxLength) {
            Thread.dumpStack();
            throw new IOException("WritableUtils.readString:too long String length: " + length);
        }
        if (length == -1)
            return null;
        byte[] buffer = new byte[length];
        in.readFully(buffer); // could/should use readFully(buffer,0,length)?
        return new String(buffer, "UTF-8");
    }

    /*
     * Write a String array as a Nework Int N, followed by Int N Byte Array Strings.
     * Could be generalised using introspection.
     *
     */
    public static void writeStringArray(DataOutput out, String[] s) throws IOException {
        if (s == null) {
            out.writeInt(0);
            return;
        }
        out.writeInt(s.length);
        for (int i = 0; i < s.length; i++) {
            writeString(out, s[i]);
        }
    }

    /*
     * Write a String array as a Nework Int N, followed by Int N Byte Array of
     * compressed Strings. Handles also null arrays and null values.
     * Could be generalised using introspection.
     *
     */
    public static void writeCompressedStringArray(DataOutput out, String[] s) throws IOException {
        if (s == null) {
            out.writeInt(-1);
            return;
        }
        out.writeInt(s.length);
        for (int i = 0; i < s.length; i++) {
            writeCompressedString(out, s[i]);
        }
    }

    /*
     * Write a String array as a Nework Int N, followed by Int N Byte Array Strings.
     * Could be generalised using introspection. Actually this bit couldn't...
     *
     */
    public static String[] readStringArray(DataInput in) throws IOException {
        int len = in.readInt();
        if (len == -1)
            return null;
        String[] s = new String[len];
        for (int i = 0; i < len; i++) {
            s[i] = readString(in);
        }
        return s;
    }

    /*
     * Write a String array as a Nework Int N, followed by Int N Byte Array Strings.
     * Could be generalised using introspection. Handles null arrays and null values.
     *
     */
    public static String[] readCompressedStringArray(DataInput in) throws IOException {
        int len = in.readInt();
        if (len == -1)
            return null;
        String[] s = new String[len];
        for (int i = 0; i < len; i++) {
            s[i] = readCompressedString(in);
        }
        return s;
    }

    /*
     *
     * Test Utility Method Display Byte Array. 
     *
     */
    public static void displayByteArray(byte[] record) {
        int i;
        for (i = 0; i < record.length - 1; i++) {
            if (i % 16 == 0) {
                System.out.println();
            }
            System.out.print(Integer.toHexString(record[i] >> 4 & 0x0F));
            System.out.print(Integer.toHexString(record[i] & 0x0F));
            System.out.print(",");
        }
        System.out.print(Integer.toHexString(record[i] >> 4 & 0x0F));
        System.out.print(Integer.toHexString(record[i] & 0x0F));
        System.out.println();
    }

    /**
     * A pair of input/output buffers that we use to clone writables.
     */
    private static class CopyInCopyOutBuffer {
        CDataOutputBuffer outBuffer = new CDataOutputBuffer();
        CDataInputBuffer inBuffer = new CDataInputBuffer();

        /**
         * Move the data from the output buffer to the input buffer.
         */
        void moveData() {
            inBuffer.reset(outBuffer.getData(), outBuffer.getLength());
        }
    }

    /**
     * Allocate a buffer for each thread that tries to clone objects.
     */
    private static ThreadLocal cloneBuffers = new ThreadLocal() {
        protected synchronized Object initialValue() {
            return new CopyInCopyOutBuffer();
        }
    };

    /**
     * Make a copy of a writable object using serialization to a buffer.
     * @param orig The object to copy
     * @return The copied object
     */
    public static CWritable clone(CWritable orig, CloudataConf conf) {
        try {
            CWritable newInst = (CWritable) ReflectionUtils.newInstance(orig.getClass(), conf);
            CopyInCopyOutBuffer buffer = (CopyInCopyOutBuffer) cloneBuffers.get();
            buffer.outBuffer.reset();
            orig.write(buffer.outBuffer);
            buffer.moveData();
            newInst.readFields(buffer.inBuffer);
            return newInst;
        } catch (IOException e) {
            throw new RuntimeException("Error writing/reading clone buffer", e);
        }
    }

    /**
     * Serializes an integer to a binary stream with zero-compressed encoding.
     * For -120 <= i <= 127, only one byte is used with the actual value.
     * For other values of i, the first byte value indicates whether the
     * integer is positive or negative, and the number of bytes that follow.
     * If the first byte value v is between -121 and -124, the following integer
     * is positive, with number of bytes that follow are -(v+120).
     * If the first byte value v is between -125 and -128, the following integer
     * is negative, with number of bytes that follow are -(v+124). Bytes are
     * stored in the high-non-zero-byte-first order.
     *
     * @param stream Binary output stream
     * @param i Integer to be serialized
     * @throws java.io.IOException 
     */
    public static void writeVInt(DataOutput stream, int i) throws IOException {
        writeVLong(stream, i);
    }

    /**
     * Serializes a long to a binary stream with zero-compressed encoding.
     * For -112 <= i <= 127, only one byte is used with the actual value.
     * For other values of i, the first byte value indicates whether the
     * long is positive or negative, and the number of bytes that follow.
     * If the first byte value v is between -113 and -120, the following long
     * is positive, with number of bytes that follow are -(v+112).
     * If the first byte value v is between -121 and -128, the following long
     * is negative, with number of bytes that follow are -(v+120). Bytes are
     * stored in the high-non-zero-byte-first order.
     * 
     * @param stream Binary output stream
     * @param i Long to be serialized
     * @throws java.io.IOException 
     */
    public static void writeVLong(DataOutput stream, long i) throws IOException {
        if (i >= -112 && i <= 127) {
            stream.writeByte((byte) i);
            return;
        }

        int len = -112;
        if (i < 0) {
            i ^= -1L; // take one's complement'
            len = -120;
        }

        long tmp = i;
        while (tmp != 0) {
            tmp = tmp >> 8;
            len--;
        }

        stream.writeByte((byte) len);

        len = (len < -120) ? -(len + 120) : -(len + 112);

        for (int idx = len; idx != 0; idx--) {
            int shiftbits = (idx - 1) * 8;
            long mask = 0xFFL << shiftbits;
            stream.writeByte((byte) ((i & mask) >> shiftbits));
        }
    }

    /**
     * Reads a zero-compressed encoded long from input stream and returns it.
     * @param stream Binary input stream
     * @throws java.io.IOException 
     * @return deserialized long from stream.
     */
    public static long readVLong(DataInput stream) throws IOException {
        int len = stream.readByte();
        if (len >= -112) {
            return len;
        }
        boolean isNegative = (len < -120);
        len = isNegative ? -(len + 120) : -(len + 112);
        long i = 0;
        for (int idx = 0; idx < len; idx++) {
            byte b = stream.readByte();
            i = i << 8;
            i = i | (b & 0xFF);
        }
        return (isNegative ? (i ^ -1L) : i);
    }

    /**
     * Reads a zero-compressed encoded integer from input stream and returns it.
     * @param stream Binary input stream
     * @throws java.io.IOException 
     * @return deserialized integer from stream.
     */
    public static int readVInt(DataInput stream) throws IOException {
        return (int) readVLong(stream);
    }

    /**
     * Get the encoded length if an integer is stored in a variable-length format
     * @return the encoded length 
     */
    public static int getVIntSize(long i) {
        if (i >= -112 && i <= 127) {
            return 1;
        }

        int len = -112;
        if (i < 0) {
            i ^= -1L; // take one's complement'
            len = -120;
        }

        long tmp = i;
        while (tmp != 0) {
            tmp = tmp >> 8;
            len--;
        }

        len = (len < -120) ? -(len + 120) : -(len + 112);

        return len + 1;
    }

    /**
     * Read an Enum value from DataInput, Enums are read and written 
     * using String values. 
     * @param <T> Enum type
     * @param in DataInput to read from 
     * @param enumType Class type of Enum
     * @return Enum represented by String read from DataInput
     * @throws IOException
     */
    public static <T extends Enum<T>> T readEnum(DataInput in, Class<T> enumType) throws IOException {
        return T.valueOf(enumType, CText.readString(in));
    }

    /**
     * writes String value of enum to DataOutput. 
     * @param out Dataoutput stream
     * @param enumVal enum value
     * @throws IOException
     */
    public static void writeEnum(DataOutput out, Enum enumVal) throws IOException {
        CText.writeString(out, enumVal.name());
    }

    /**
     * Skip <i>len</i> number of bytes in input stream<i>in</i>
     * @param in input stream
     * @param len number of bytes to skip
     * @throws IOException when skipped less number of bytes
     */
    public static void skipFully(DataInput in, int len) throws IOException {
        int total = 0;
        int cur = 0;

        while ((total < len) && ((cur = in.skipBytes(len - total)) > 0)) {
            total += cur;
        }

        if (total < len) {
            throw new IOException("Not able to skip " + len + " bytes, possibly " + "due to end of input.");
        }
    }

    public static int getIntByteSize() {
        return Integer.SIZE / 8;
    }

    public static int getShortByteSize() {
        return Short.SIZE / 8;
    }

    public static int getLongByteSize() {
        return Long.SIZE / 8;
    }
}