ivory.app.PreprocessCollection.java Source code

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/*
 * Ivory: A Hadoop toolkit for web-scale information retrieval research
 *
 * Licensed under the Apache License, Version 2.0 (the "License"); you
 * may not use this file except in compliance with the License. You may
 * obtain a copy of the License at
 *
 * http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
 * implied. See the License for the specific language governing
 * permissions and limitations under the License.
 */

package ivory.app;

import ivory.core.Constants;
import ivory.core.RetrievalEnvironment;
import ivory.core.preprocess.BuildDictionary;
import ivory.core.preprocess.BuildIntDocVectors;
import ivory.core.preprocess.BuildIntDocVectorsForwardIndex;
import ivory.core.preprocess.BuildTermDocVectors;
import ivory.core.preprocess.BuildTermDocVectorsForwardIndex;
import ivory.core.preprocess.ComputeGlobalTermStatistics;
import ivory.core.tokenize.GalagoTokenizer;
import ivory.core.tokenize.Tokenizer;

import org.apache.commons.cli.CommandLine;
import org.apache.commons.cli.CommandLineParser;
import org.apache.commons.cli.GnuParser;
import org.apache.commons.cli.HelpFormatter;
import org.apache.commons.cli.OptionBuilder;
import org.apache.commons.cli.Options;
import org.apache.commons.cli.ParseException;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.conf.Configured;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.mapreduce.InputFormat;
import org.apache.hadoop.mapreduce.lib.input.SequenceFileInputFormat;
import org.apache.hadoop.util.Tool;
import org.apache.hadoop.util.ToolRunner;
import org.apache.log4j.Logger;

import cern.colt.Arrays;

import edu.umd.cloud9.collection.DocnoMapping;

@SuppressWarnings("unchecked")
public class PreprocessCollection extends Configured implements Tool {
    private static final Logger LOG = Logger.getLogger(PreprocessCollection.class);

    public static final String COLLECTION_PATH = "collection";
    public static final String COLLECTION_NAME = "collectionName";
    public static final String INDEX_PATH = "index";
    public static final String INPUTFORMAT = "inputFormat";
    public static final String TOKENIZER = "tokenizer";
    public static final String DOCNO_MAPPING = "docnoMapping";
    public static final String DOCNO_OFFSET = "docnoOffset";
    public static final String MIN_DF = "minDf";

    @SuppressWarnings({ "static-access" })
    protected static Options createOptions() {
        Options options = new Options();

        options.addOption(OptionBuilder.withArgName("path").hasArg().withDescription("(required) collection path")
                .create(COLLECTION_PATH));
        options.addOption(OptionBuilder.withArgName("name").hasArg().withDescription("(required) collection name")
                .create(COLLECTION_NAME));
        options.addOption(OptionBuilder.withArgName("path").hasArg().withDescription("(required) index path")
                .create(INDEX_PATH));
        options.addOption(OptionBuilder.withArgName("class").hasArg()
                .withDescription("(required) fully-qualified DocnoMapping").create(DOCNO_MAPPING));

        options.addOption(OptionBuilder.withArgName("class").hasArg()
                .withDescription("(optional) fully-qualified Hadoop InputFormat: SequenceFileInputFormat default")
                .create(INPUTFORMAT));
        options.addOption(OptionBuilder.withArgName("class").hasArg()
                .withDescription("(optional) fully-qualified Tokenizer: GalagoTokenizer default")
                .create(TOKENIZER));
        options.addOption(
                OptionBuilder.withArgName("num").hasArg().withDescription("(optional) min Df").create(MIN_DF));
        options.addOption(OptionBuilder.withArgName("num").hasArg().withDescription("(optional) docno offset")
                .create(DOCNO_OFFSET));

        return options;
    }

    /**
     * Runs this tool.
     */
    @Override
    public int run(String[] args) throws Exception {
        Options options = createOptions();

        CommandLine cmdline;
        CommandLineParser parser = new GnuParser();

        try {
            cmdline = parser.parse(options, args);
        } catch (ParseException exp) {
            System.err.println("Error parsing command line: " + exp.getMessage());
            return -1;
        }

        if (!cmdline.hasOption(COLLECTION_PATH) || !cmdline.hasOption(COLLECTION_NAME)
                || !cmdline.hasOption(INDEX_PATH) || !cmdline.hasOption(DOCNO_MAPPING)) {
            System.out.println("args: " + Arrays.toString(args));
            HelpFormatter formatter = new HelpFormatter();
            formatter.setWidth(120);
            formatter.printHelp(this.getClass().getName(), options);
            ToolRunner.printGenericCommandUsage(System.out);
            return -1;
        }

        String collection = cmdline.getOptionValue(COLLECTION_PATH);
        String collectionName = cmdline.getOptionValue(COLLECTION_NAME);
        String indexPath = cmdline.getOptionValue(INDEX_PATH);
        int docnoOffset = 0;

        if (cmdline.hasOption(DOCNO_OFFSET)) {
            docnoOffset = Integer.parseInt(cmdline.getOptionValue(DOCNO_OFFSET));
        }

        Class<? extends DocnoMapping> docnoMappingClass = null;
        try {
            docnoMappingClass = (Class<? extends DocnoMapping>) Class
                    .forName(cmdline.getOptionValue(DOCNO_MAPPING));
        } catch (ClassNotFoundException e) {
            throw new RuntimeException(e);
        }

        @SuppressWarnings("rawtypes")
        Class<? extends InputFormat> inputFormatClass = SequenceFileInputFormat.class;
        if (cmdline.hasOption(INPUTFORMAT)) {
            try {
                inputFormatClass = (Class<? extends InputFormat<?, ?>>) Class
                        .forName(cmdline.getOptionValue(INPUTFORMAT));
            } catch (ClassNotFoundException e) {
                throw new RuntimeException(e);
            }
        }

        Class<? extends Tokenizer> tokenizerClass = GalagoTokenizer.class;
        if (cmdline.hasOption(TOKENIZER)) {
            try {
                tokenizerClass = (Class<? extends Tokenizer>) Class.forName(cmdline.getOptionValue(TOKENIZER));
            } catch (ClassNotFoundException e) {
                throw new RuntimeException(e);
            }
        }

        int minDf = 2;
        if (cmdline.hasOption(MIN_DF)) {
            minDf = Integer.parseInt(cmdline.getOptionValue(MIN_DF));
        }

        LOG.info("Tool name: " + this.getClass().getSimpleName());
        LOG.info(String.format(" -%s %s", COLLECTION_PATH, collection));
        LOG.info(String.format(" -%s %s", COLLECTION_NAME, collectionName));
        LOG.info(String.format(" -%s %s", INDEX_PATH, indexPath));
        LOG.info(String.format(" -%s %s", DOCNO_MAPPING, docnoMappingClass.getCanonicalName()));
        LOG.info(String.format(" -%s %s", INPUTFORMAT, inputFormatClass.getCanonicalName()));
        LOG.info(String.format(" -%s %s", TOKENIZER, tokenizerClass.getCanonicalName()));
        LOG.info(String.format(" -%s %d", MIN_DF, minDf));

        Configuration conf = getConf();
        FileSystem fs = FileSystem.get(conf);

        // Create the index directory if it doesn't already exist.
        Path p = new Path(indexPath);
        if (!fs.exists(p)) {
            LOG.info("Index directory " + p + " doesn't exist, creating.");
            fs.mkdirs(p);
        } else {
            LOG.info("Index directory " + p + " already exists!");
            return -1;
        }

        RetrievalEnvironment env = new RetrievalEnvironment(indexPath, fs);

        conf.set(Constants.CollectionName, collectionName);
        conf.set(Constants.CollectionPath, collection);
        conf.set(Constants.IndexPath, indexPath);
        conf.set(Constants.InputFormat, inputFormatClass.getCanonicalName());
        conf.set(Constants.Tokenizer, tokenizerClass.getCanonicalName());
        conf.set(Constants.DocnoMappingClass, docnoMappingClass.getCanonicalName());
        conf.set(Constants.DocnoMappingFile, env.getDocnoMappingData().toString());

        conf.setInt(Constants.DocnoOffset, docnoOffset);
        conf.setInt(Constants.MinDf, minDf);
        conf.setInt(Constants.MaxDf, Integer.MAX_VALUE);

        Path mappingFile = env.getDocnoMappingData();
        docnoMappingClass.newInstance().getBuilder().build(new Path(collection), mappingFile, conf);

        new BuildTermDocVectors(conf).run();
        new ComputeGlobalTermStatistics(conf).run();
        new BuildDictionary(conf).run();
        new BuildIntDocVectors(conf).run();

        new BuildIntDocVectorsForwardIndex(conf).run();
        new BuildTermDocVectorsForwardIndex(conf).run();

        return 0;
    }

    public static void main(String[] args) throws Exception {
        ToolRunner.run(new PreprocessCollection(), args);
    }
}