edu.umd.cloud9.collection.trec.DemoCountTrecDocuments.java Source code

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/*
 * Cloud9: A MapReduce Library for Hadoop
 *
 * Licensed under the Apache License, Version 2.0 (the "License"); you
 * may not use this file except in compliance with the License. You may
 * obtain a copy of the License at
 *
 * http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
 * implied. See the License for the specific language governing
 * permissions and limitations under the License.
 */

package edu.umd.cloud9.collection.trec;

import java.io.IOException;
import java.net.URI;
import java.util.Arrays;

import org.apache.commons.cli.CommandLine;
import org.apache.commons.cli.CommandLineParser;
import org.apache.commons.cli.GnuParser;
import org.apache.commons.cli.HelpFormatter;
import org.apache.commons.cli.OptionBuilder;
import org.apache.commons.cli.Options;
import org.apache.commons.cli.ParseException;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.conf.Configured;
import org.apache.hadoop.filecache.DistributedCache;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.IntWritable;
import org.apache.hadoop.io.LongWritable;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.mapreduce.Counters;
import org.apache.hadoop.mapreduce.Job;
import org.apache.hadoop.mapreduce.Mapper;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat;
import org.apache.hadoop.mapreduce.lib.output.FileOutputFormat;
import org.apache.hadoop.util.Tool;
import org.apache.hadoop.util.ToolRunner;
import org.apache.log4j.Logger;

import edu.umd.cloud9.collection.DocnoMapping;

/**
 * Simple demo program that counts all the documents in the TREC collection. Run without any
 * arguments for help. The guava jar must be included using {@code -libjar}.
 *
 * @author Jimmy Lin
 */
public class DemoCountTrecDocuments extends Configured implements Tool {
    private static final Logger LOG = Logger.getLogger(DemoCountTrecDocuments.class);

    private static enum Count {
        DOCS
    };

    private static class MyMapper extends Mapper<LongWritable, TrecDocument, Text, IntWritable> {
        private static final Text docid = new Text();
        private static final IntWritable one = new IntWritable(1);
        private DocnoMapping docMapping;

        @Override
        public void setup(Context context) {
            try {
                Configuration conf = context.getConfiguration();
                Path[] localFiles = DistributedCache.getLocalCacheFiles(conf);

                // Instead of hard-coding the actual concrete DocnoMapping class, have the name of the
                // class passed in as a property; this makes the mapper more general.
                docMapping = (DocnoMapping) Class.forName(conf.get("DocnoMappingClass")).newInstance();

                // Simply assume that the mappings file is the only file in the distributed cache.
                docMapping.loadMapping(localFiles[0], FileSystem.getLocal(conf));
            } catch (Exception e) {
                e.printStackTrace();
                throw new RuntimeException("Error initializing DocnoMapping!");
            }
        }

        @Override
        public void map(LongWritable key, TrecDocument doc, Context context)
                throws IOException, InterruptedException {
            context.getCounter(Count.DOCS).increment(1);
            docid.set(doc.getDocid());
            one.set(docMapping.getDocno(doc.getDocid()));
            context.write(docid, one);
        }
    }

    /**
     * Creates an instance of this tool.
     */
    public DemoCountTrecDocuments() {
    }

    public static final String COLLECTION_OPTION = "collection";
    public static final String OUTPUT_OPTION = "output";
    public static final String MAPPING_OPTION = "docnoMapping";

    /**
     * Runs this tool.
     */
    @SuppressWarnings("static-access")
    public int run(String[] args) throws Exception {
        Options options = new Options();
        options.addOption(OptionBuilder.withArgName("path").hasArg().withDescription("(required) collection path")
                .create(COLLECTION_OPTION));
        options.addOption(OptionBuilder.withArgName("path").hasArg().withDescription("(required) output path")
                .create(OUTPUT_OPTION));
        options.addOption(OptionBuilder.withArgName("path").hasArg().withDescription("(required) DocnoMapping data")
                .create(MAPPING_OPTION));

        CommandLine cmdline;
        CommandLineParser parser = new GnuParser();
        try {
            cmdline = parser.parse(options, args);
        } catch (ParseException exp) {
            System.err.println("Error parsing command line: " + exp.getMessage());
            return -1;
        }

        if (!cmdline.hasOption(COLLECTION_OPTION) || !cmdline.hasOption(OUTPUT_OPTION)
                || !cmdline.hasOption(MAPPING_OPTION)) {
            HelpFormatter formatter = new HelpFormatter();
            formatter.printHelp(this.getClass().getName(), options);
            ToolRunner.printGenericCommandUsage(System.out);
            return -1;
        }

        String inputPath = cmdline.getOptionValue(COLLECTION_OPTION);
        String outputPath = cmdline.getOptionValue(OUTPUT_OPTION);
        String mappingFile = cmdline.getOptionValue(MAPPING_OPTION);

        LOG.info("Tool: " + DemoCountTrecDocuments.class.getCanonicalName());
        LOG.info(" - input: " + inputPath);
        LOG.info(" - output dir: " + outputPath);
        LOG.info(" - docno mapping file: " + mappingFile);

        Job job = new Job(getConf(), DemoCountTrecDocuments.class.getSimpleName());
        job.setJarByClass(DemoCountTrecDocuments.class);

        job.setNumReduceTasks(0);

        // Pass in the class name as a String; this is makes the mapper general in being able to load
        // any collection of Indexable objects that has docid/docno mapping specified by a DocnoMapping
        // object.
        job.getConfiguration().set("DocnoMappingClass", TrecDocnoMapping.class.getCanonicalName());

        // Put the mapping file in the distributed cache so each map worker will have it.
        DistributedCache.addCacheFile(new URI(mappingFile), job.getConfiguration());

        FileInputFormat.setInputPaths(job, new Path(inputPath));
        FileOutputFormat.setOutputPath(job, new Path(outputPath));
        FileOutputFormat.setCompressOutput(job, false);

        job.setInputFormatClass(TrecDocumentInputFormat.class);
        job.setOutputKeyClass(Text.class);
        job.setOutputValueClass(IntWritable.class);

        job.setMapperClass(MyMapper.class);

        // Delete the output directory if it exists already.
        FileSystem.get(job.getConfiguration()).delete(new Path(outputPath), true);

        job.waitForCompletion(true);

        Counters counters = job.getCounters();
        int numDocs = (int) counters.findCounter(Count.DOCS).getValue();
        LOG.info("Read " + numDocs + " docs.");

        return 0;
    }

    /**
     * Dispatches command-line arguments to the tool via the {@code ToolRunner}.
     */
    public static void main(String[] args) throws Exception {
        LOG.info("Running " + DemoCountTrecDocuments.class.getCanonicalName() + " with args "
                + Arrays.toString(args));
        ToolRunner.run(new Configuration(), new DemoCountTrecDocuments(), args);
    }
}