edu.scripps.fl.pubchem.db.PCAssayXRef.java Source code

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Here is the source code for edu.scripps.fl.pubchem.db.PCAssayXRef.java

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/*
 * Copyright 2010 The Scripps Research Institute
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
package edu.scripps.fl.pubchem.db;

import java.io.Serializable;

import javax.persistence.Column;
import javax.persistence.Entity;
import javax.persistence.GeneratedValue;
import javax.persistence.GenerationType;
import javax.persistence.Id;
import javax.persistence.JoinColumn;
import javax.persistence.ManyToOne;
import javax.persistence.Table;
import javax.persistence.UniqueConstraint;

import org.apache.commons.lang.builder.ToStringBuilder;

@Entity
@Table(name = "pcassay_xref") //, uniqueConstraints = { @UniqueConstraint(columnNames = { "assay_assay_id", "xref_xref_id", "panel_panel_id" }) })
public class PCAssayXRef implements Serializable {

    private PCAssay assay = null;
    private String comment = "";
    private Long id = -1L;
    private PCAssayPanel panel = null;
    private Boolean target = false;
    private Long taxon = -1L;
    private String taxonName = "";
    private String taxonCommon = "";
    private XRef xRef = null;

    @Override
    public boolean equals(Object obj) {
        if (this == obj)
            return true;
        if (obj == null)
            return false;
        if (!(obj instanceof PCAssayXRef))
            return false;
        PCAssayXRef other = (PCAssayXRef) obj;
        if (id == null) {
            if (other.id != null)
                return false;
        } else if (!id.equals(other.id))
            return false;
        return true;
    }

    @ManyToOne(optional = false)
    @JoinColumn(name = "assay_assay_id", insertable = false, updatable = false, nullable = false)
    public PCAssay getAssay() {
        return assay;
    }

    @Column(name = "pcassay_xref_comment", length = 4000)
    public String getComment() {
        return comment;
    }

    @Id
    @Column(name = "pcassay_xref_id")
    @GeneratedValue(strategy = GenerationType.AUTO)
    public Long getId() {
        return id;
    }

    @ManyToOne(optional = true)
    public PCAssayPanel getPanel() {
        return panel;
    }

    @Column(name = "pc_assay_xref_taxon")
    public Long getTaxon() {
        return taxon;
    }

    @Column(name = "pc_assay_xref_taxon_common")
    public String getTaxonCommon() {
        return taxonCommon;
    }

    @Column(name = "pc_assay_xref_taxon_name")
    public String getTaxonName() {
        return taxonName;
    }

    @ManyToOne(optional = false)
    public XRef getXRef() {
        return xRef;
    }

    @Override
    public int hashCode() {
        final int prime = 31;
        int result = 1;
        result = prime * result + ((id == null) ? 0 : id.hashCode());
        return result;
    }

    @Column(name = "pcassay_xref_istarget")
    public Boolean isTarget() {
        return target;
    }

    public void setAssay(PCAssay assay) {
        this.assay = assay;
    }

    public void setComment(String comment) {
        this.comment = comment;
    }

    public void setId(Long id) {
        this.id = id;
    }

    public void setPanel(PCAssayPanel panel) {
        this.panel = panel;
    }

    public void setTarget(Boolean target) {
        this.target = target;
    }

    public void setTaxon(Long taxon) {
        this.taxon = taxon;
    }

    public void setTaxonCommon(String taxonCommon) {
        this.taxonCommon = taxonCommon;
    }

    public void setTaxonName(String taxonName) {
        this.taxonName = taxonName;
    }

    public void setXRef(XRef ref) {
        xRef = ref;
    }

    @Override
    public String toString() {
        //      return ToStringBuilder.reflectionToString(this);
        return String.format("assay = %s, panel = %s, xref=%s", getAssay().getId(), null, getXRef().getId());
    }

}