BuildPersonalizedPageRankRecords.java Source code

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Here is the source code for BuildPersonalizedPageRankRecords.java

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/*
 * Cloud9: A Hadoop toolkit for working with big data
 *
 * Licensed under the Apache License, Version 2.0 (the "License"); you
 * may not use this file except in compliance with the License. You may
 * obtain a copy of the License at
 *
 * http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
 * implied. See the License for the specific language governing
 * permissions and limitations under the License.
 */

//package edu.umd.cloud9.example.pagerank;

import java.io.IOException;
import java.util.Arrays;

import org.apache.commons.cli.CommandLine;
import org.apache.commons.cli.CommandLineParser;
import org.apache.commons.cli.GnuParser;
import org.apache.commons.cli.HelpFormatter;
import org.apache.commons.cli.OptionBuilder;
import org.apache.commons.cli.Options;
import org.apache.commons.cli.ParseException;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.conf.Configured;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.IntWritable;
import org.apache.hadoop.io.LongWritable;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.mapreduce.Job;
import org.apache.hadoop.mapreduce.Mapper;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat;
import org.apache.hadoop.mapreduce.lib.input.TextInputFormat;
import org.apache.hadoop.mapreduce.lib.output.FileOutputFormat;
import org.apache.hadoop.mapreduce.lib.output.SequenceFileOutputFormat;
import org.apache.hadoop.util.Tool;
import org.apache.hadoop.util.ToolRunner;
import org.apache.log4j.Logger;

import edu.umd.cloud9.io.array.ArrayListOfIntsWritable;
import edu.umd.cloud9.io.map.HMapIFW;
import pagerank.PageRankNodeMultiSrc;
//import pagerank.PageRankNodeMultiSrc;

/**
 * <p>
 * Driver program that takes a plain-text encoding of a directed graph and builds corresponding
 * Hadoop structures for representing the graph.
 * </p>
 *
 */
public class BuildPersonalizedPageRankRecords extends Configured implements Tool {
    private static final Logger LOG = Logger.getLogger(BuildPersonalizedPageRankRecords.class);

    private static final String NODE_CNT_FIELD = "node.cnt";
    private static final String NODE_SRC = "source_pagerank";

    private static class MyMapper extends Mapper<LongWritable, Text, IntWritable, PageRankNodeMultiSrc> {
        private static final IntWritable nid = new IntWritable();
        private static final PageRankNodeMultiSrc node = new PageRankNodeMultiSrc();
        private static String SrcNode;
        private static int[] src;

        @Override
        public void setup(Mapper<LongWritable, Text, IntWritable, PageRankNodeMultiSrc>.Context context) {
            int n = context.getConfiguration().getInt(NODE_CNT_FIELD, 0);
            SrcNode = context.getConfiguration().get(NODE_SRC);
            if (n == 0) {
                throw new RuntimeException(NODE_CNT_FIELD + " cannot be 0!");
            }
            String[] sources = SrcNode.split(",");
            //System.out.print(sources[0]+sources[1]+"\n\n\n\n");
            src = new int[sources.length];
            for (int i = 0; i < sources.length; i++) {
                src[i] = Integer.parseInt(sources[i]);
            }
            node.setType(PageRankNodeMultiSrc.Type.Complete);
            node.setPageRank(0); //unused
            node.setSrcNode(src);
        }

        @Override
        public void map(LongWritable key, Text t, Context context) throws IOException, InterruptedException {
            String[] arr = t.toString().trim().split("\\s+");

            nid.set(Integer.parseInt(arr[0]));
            if (arr.length == 1) {
                node.setNodeId(Integer.parseInt(arr[0]));
                node.setAdjacencyList(new ArrayListOfIntsWritable());

            } else {
                node.setNodeId(Integer.parseInt(arr[0]));

                int[] neighbors = new int[arr.length - 1];
                for (int i = 1; i < arr.length; i++) {
                    neighbors[i - 1] = Integer.parseInt(arr[i]);
                }

                node.setAdjacencyList(new ArrayListOfIntsWritable(neighbors));
            }

            context.getCounter("graph", "numNodes").increment(1);
            context.getCounter("graph", "numEdges").increment(arr.length - 1);

            if (arr.length > 1) {
                context.getCounter("graph", "numActiveNodes").increment(1);
            }
            for (int i = 0; i < src.length; i++) {
                if (nid.get() == src[i]) {
                    node.setSrcNodePG(src[i], 1.0f);
                    context.write(nid, node);
                    node.setSrcNodePG(src[i], 0.0f);
                    return;
                } else {
                    continue;
                }
            }
            context.write(nid, node);
        }
    }

    public BuildPersonalizedPageRankRecords() {
    }

    private static final String INPUT = "input";
    private static final String OUTPUT = "output";
    private static final String NUM_NODES = "numNodes";
    private static final String SOURCES = "sources";

    /**
     * Runs this tool.
     */
    @SuppressWarnings({ "static-access" })
    public int run(String[] args) throws Exception {
        Options options = new Options();

        options.addOption(OptionBuilder.withArgName("path").hasArg().withDescription("input path").create(INPUT));
        options.addOption(OptionBuilder.withArgName("path").hasArg().withDescription("output path").create(OUTPUT));
        options.addOption(
                OptionBuilder.withArgName("num").hasArg().withDescription("number of nodes").create(NUM_NODES));
        //parsing more than 1 integer later;
        options.addOption(
                OptionBuilder.withArgName("src").hasArg().withDescription("source of pagerank").create(SOURCES));

        CommandLine cmdline;
        CommandLineParser parser = new GnuParser();

        try {
            cmdline = parser.parse(options, args);
        } catch (ParseException exp) {
            System.err.println("Error parsing command line: " + exp.getMessage());
            return -1;
        }

        if (!cmdline.hasOption(INPUT) || !cmdline.hasOption(OUTPUT) || !cmdline.hasOption(NUM_NODES)
                || !cmdline.hasOption(SOURCES)) {
            System.out.println("args: " + Arrays.toString(args));
            HelpFormatter formatter = new HelpFormatter();
            formatter.setWidth(120);
            formatter.printHelp(this.getClass().getName(), options);
            ToolRunner.printGenericCommandUsage(System.out);
            return -1;
        }

        String inputPath = cmdline.getOptionValue(INPUT);
        String outputPath = cmdline.getOptionValue(OUTPUT);
        int n = Integer.parseInt(cmdline.getOptionValue(NUM_NODES));
        //Change to array later
        String src = cmdline.getOptionValue(SOURCES);

        LOG.info("Tool name: " + BuildPersonalizedPageRankRecords.class.getSimpleName());
        LOG.info(" - inputDir: " + inputPath);
        LOG.info(" - outputDir: " + outputPath);
        LOG.info(" - numNodes: " + n);

        Configuration conf = getConf();
        conf.setInt(NODE_CNT_FIELD, n);
        //more to be set later;
        conf.set(NODE_SRC, src);
        conf.setInt("mapred.min.split.size", 1024 * 1024 * 1024);

        Job job = Job.getInstance(conf);
        job.setJobName(BuildPersonalizedPageRankRecords.class.getSimpleName() + ":" + inputPath);
        job.setJarByClass(BuildPersonalizedPageRankRecords.class);

        job.setNumReduceTasks(0);

        FileInputFormat.addInputPath(job, new Path(inputPath));
        FileOutputFormat.setOutputPath(job, new Path(outputPath));

        job.setInputFormatClass(TextInputFormat.class);
        job.setOutputFormatClass(SequenceFileOutputFormat.class);

        job.setMapOutputKeyClass(IntWritable.class);
        job.setMapOutputValueClass(PageRankNodeMultiSrc.class);

        job.setOutputKeyClass(IntWritable.class);
        job.setOutputValueClass(PageRankNodeMultiSrc.class);

        job.setMapperClass(MyMapper.class);

        // Delete the output directory if it exists already.
        FileSystem.get(conf).delete(new Path(outputPath), true);

        job.waitForCompletion(true);

        return 0;
    }

    /**
     * Dispatches command-line arguments to the tool via the {@code ToolRunner}.
     */
    public static void main(String[] args) throws Exception {
        ToolRunner.run(new BuildPersonalizedPageRankRecords(), args);
    }
}