List of usage examples for org.hibernate Query iterate
Iterator<R> iterate();
From source file:edu.mgupi.pass.db.sensors.SensorTypesFactory.java
public static java.util.Iterator iterateSensorTypesByQuery(PersistentSession session, String condition, String orderBy, org.hibernate.LockMode lockMode) throws PersistentException { StringBuffer sb = new StringBuffer("From edu.mgupi.pass.db.sensors.SensorTypes as SensorTypes"); if (condition != null) sb.append(" Where ").append(condition); if (orderBy != null) sb.append(" Order By ").append(orderBy); try {/*from ww w.j a v a2s . co m*/ Query query = session.createQuery(sb.toString()); query.setLockMode("this", lockMode); return query.iterate(); } catch (Exception e) { _logger.error("iterateSensorTypesByQuery(PersistentSession session, String condition, String orderBy)", e); throw new PersistentException(e); } }
From source file:edu.mgupi.pass.db.surfaces.MaterialsFactory.java
public static java.util.Iterator iterateMaterialsByQuery(PersistentSession session, String condition, String orderBy) throws PersistentException { StringBuffer sb = new StringBuffer("From edu.mgupi.pass.db.surfaces.Materials as Materials"); if (condition != null) sb.append(" Where ").append(condition); if (orderBy != null) sb.append(" Order By ").append(orderBy); try {//from w w w .j av a 2 s .co m Query query = session.createQuery(sb.toString()); return query.iterate(); } catch (Exception e) { _logger.error("iterateMaterialsByQuery(PersistentSession session, String condition, String orderBy)", e); throw new PersistentException(e); } }
From source file:edu.mgupi.pass.db.surfaces.MaterialsFactory.java
public static java.util.Iterator iterateMaterialsByQuery(PersistentSession session, String condition, String orderBy, org.hibernate.LockMode lockMode) throws PersistentException { StringBuffer sb = new StringBuffer("From edu.mgupi.pass.db.surfaces.Materials as Materials"); if (condition != null) sb.append(" Where ").append(condition); if (orderBy != null) sb.append(" Order By ").append(orderBy); try {//from w ww . ja va 2 s . c o m Query query = session.createQuery(sb.toString()); query.setLockMode("this", lockMode); return query.iterate(); } catch (Exception e) { _logger.error("iterateMaterialsByQuery(PersistentSession session, String condition, String orderBy)", e); throw new PersistentException(e); } }
From source file:edu.mgupi.pass.db.surfaces.SurfaceClassesFactory.java
public static java.util.Iterator iterateSurfaceClassesByQuery(PersistentSession session, String condition, String orderBy) throws PersistentException { StringBuffer sb = new StringBuffer("From edu.mgupi.pass.db.surfaces.SurfaceClasses as SurfaceClasses"); if (condition != null) sb.append(" Where ").append(condition); if (orderBy != null) sb.append(" Order By ").append(orderBy); try {//from ww w .jav a 2s . c o m Query query = session.createQuery(sb.toString()); return query.iterate(); } catch (Exception e) { _logger.error( "iterateSurfaceClassesByQuery(PersistentSession session, String condition, String orderBy)", e); throw new PersistentException(e); } }
From source file:edu.mgupi.pass.db.surfaces.SurfaceClassesFactory.java
public static java.util.Iterator iterateSurfaceClassesByQuery(PersistentSession session, String condition, String orderBy, org.hibernate.LockMode lockMode) throws PersistentException { StringBuffer sb = new StringBuffer("From edu.mgupi.pass.db.surfaces.SurfaceClasses as SurfaceClasses"); if (condition != null) sb.append(" Where ").append(condition); if (orderBy != null) sb.append(" Order By ").append(orderBy); try {/* ww w . j a v a2 s . c o m*/ Query query = session.createQuery(sb.toString()); query.setLockMode("this", lockMode); return query.iterate(); } catch (Exception e) { _logger.error( "iterateSurfaceClassesByQuery(PersistentSession session, String condition, String orderBy)", e); throw new PersistentException(e); } }
From source file:edu.mgupi.pass.db.surfaces.SurfacesFactory.java
public static java.util.Iterator iterateSurfacesByQuery(PersistentSession session, String condition, String orderBy) throws PersistentException { StringBuffer sb = new StringBuffer("From edu.mgupi.pass.db.surfaces.Surfaces as Surfaces"); if (condition != null) sb.append(" Where ").append(condition); if (orderBy != null) sb.append(" Order By ").append(orderBy); try {/*from w ww . j a va 2 s.c om*/ Query query = session.createQuery(sb.toString()); return query.iterate(); } catch (Exception e) { _logger.error("iterateSurfacesByQuery(PersistentSession session, String condition, String orderBy)", e); throw new PersistentException(e); } }
From source file:edu.mgupi.pass.db.surfaces.SurfacesFactory.java
public static java.util.Iterator iterateSurfacesByQuery(PersistentSession session, String condition, String orderBy, org.hibernate.LockMode lockMode) throws PersistentException { StringBuffer sb = new StringBuffer("From edu.mgupi.pass.db.surfaces.Surfaces as Surfaces"); if (condition != null) sb.append(" Where ").append(condition); if (orderBy != null) sb.append(" Order By ").append(orderBy); try {//from w ww . j a va2s . c o m Query query = session.createQuery(sb.toString()); query.setLockMode("this", lockMode); return query.iterate(); } catch (Exception e) { _logger.error("iterateSurfacesByQuery(PersistentSession session, String condition, String orderBy)", e); throw new PersistentException(e); } }
From source file:edu.mgupi.pass.db.surfaces.SurfaceTypesFactory.java
public static java.util.Iterator iterateSurfaceTypesByQuery(PersistentSession session, String condition, String orderBy) throws PersistentException { StringBuffer sb = new StringBuffer("From edu.mgupi.pass.db.surfaces.SurfaceTypes as SurfaceTypes"); if (condition != null) sb.append(" Where ").append(condition); if (orderBy != null) sb.append(" Order By ").append(orderBy); try {//from w w w.j a v a 2 s . c o m Query query = session.createQuery(sb.toString()); return query.iterate(); } catch (Exception e) { _logger.error("iterateSurfaceTypesByQuery(PersistentSession session, String condition, String orderBy)", e); throw new PersistentException(e); } }
From source file:edu.mgupi.pass.db.surfaces.SurfaceTypesFactory.java
public static java.util.Iterator iterateSurfaceTypesByQuery(PersistentSession session, String condition, String orderBy, org.hibernate.LockMode lockMode) throws PersistentException { StringBuffer sb = new StringBuffer("From edu.mgupi.pass.db.surfaces.SurfaceTypes as SurfaceTypes"); if (condition != null) sb.append(" Where ").append(condition); if (orderBy != null) sb.append(" Order By ").append(orderBy); try {/*w w w.j av a 2 s . co m*/ Query query = session.createQuery(sb.toString()); query.setLockMode("this", lockMode); return query.iterate(); } catch (Exception e) { _logger.error("iterateSurfaceTypesByQuery(PersistentSession session, String condition, String orderBy)", e); throw new PersistentException(e); } }
From source file:edu.scripps.fl.pubchem.app.curves.AIDStage.java
License:Apache License
@Override public void process(Object obj) throws StageException { try {//w w w . j a va 2 s. c o m Integer aid = (Integer) obj; List<Double> concentrations = getConcentrations(aid); Query query2 = getSession().createQuery("from PCAssayResult where assay.AID = ? and SID = ?"); // get top 10000 results from reference aid int counter = 0; Query query = getSession().createQuery( "from PCAssayResult where assay.AID = ? AND ( outcome = 'Active' OR outcome = 'Probe' ) ORDER BY rankScore desc"); query.setInteger(0, getReferenceAID()); Iterator<PCAssayResult> iter = query.iterate(); while (iter.hasNext() && counter++ < getTopX()) { PCAssayResult referenceResult = iter.next(); referenceResult.getTestedValues(); emit(new Object[] { referenceConcentrations, referenceResult }); query2.setInteger(0, aid); query2.setLong(1, referenceResult.getSID()); Iterator<PCAssayResult> iter2 = query2.iterate(); while (iter2.hasNext()) { PCAssayResult result = iter2.next(); result.getTestedValues(); emit(new Object[] { concentrations, result }); } } } catch (Exception ex) { throw new StageException(this, ex); } }