Example usage for org.dom4j Element add

Introduction

In this page you can find the example usage for org.dom4j Element add.

Prototype

void add(Namespace namespace);

Source Link

Document

Adds the given Namespace to this element.

Usage

From source file:lost.tok.html.DiscussionPage.java

License:Open Source License

@Override
protected String getBody() {
    Element body = DocumentHelper.createElement("div"); //$NON-NLS-1$
    body.addAttribute("id", "discussion"); //$NON-NLS-1$ //$NON-NLS-2$
    body.addAttribute("class", "main_content"); //$NON-NLS-1$ //$NON-NLS-2$

    body.addElement("h1").addText(disc.getDiscName()); //$NON-NLS-1$

    body.addText(Messages.getString("DiscussionPage.CreatedBy")); //$NON-NLS-1$
    body.addElement("em").addText(disc.getCreatorName()); //$NON-NLS-1$
    body.addElement("p").addText(disc.getDescription()); //$NON-NLS-1$

    if (disc.getLink() != null)
        body.add(getLinkInfoElement());

    Element opinionList = body.addElement("ol"); //$NON-NLS-1$
    for (Opinion o : disc.getOpinions()) {
        Element listItem = opinionList.addElement("li"); //$NON-NLS-1$
        listItem.add(getOpinionElement(o));
    }/*from w ww .  ja  v a  2 s  . c  om*/

    // TODO(Shay, low): Consider adding related root and source files

    return GeneralFunctions.elementToString(body);
}

---

From source file:lost.tok.html.DiscussionPage.java

License:Open Source License

/**
 * Returns a div element containing all the information related to the discussion's link
 *//*w w w .j a va 2 s . co m*/
private Element getLinkInfoElement() {
    Element div = DocumentHelper.createElement("div"); //$NON-NLS-1$

    Link l = disc.getLink();

    div.addAttribute("class", "linkInfo"); //$NON-NLS-1$ //$NON-NLS-2$
    div.addElement("h2").addText(l.getSubject()); //$NON-NLS-1$
    Element typeElement = div.addElement("p"); //$NON-NLS-1$

    typeElement.addText(Messages.getString("DiscussionPage.linkType")); //$NON-NLS-1$
    typeElement.addElement("em").addText(l.getDisplayLinkType()); //$NON-NLS-1$

    Element sublinksList = div.addElement("ul"); //$NON-NLS-1$
    for (SubLink sl : l.getSubLinkList()) {
        LinkedList<Excerption> excerptions = new LinkedList<Excerption>();
        for (Excerption e : sl.getExcerption())
            excerptions.add(e);

        String eText = Excerption.concat(excerptions);
        Source src = sl.getLinkedSource();

        Element listItem = sublinksList.addElement("li"); //$NON-NLS-1$

        Element quoteElm = listItem.addElement("blockquote"); //$NON-NLS-1$
        quoteElm.addAttribute("class", "sublink"); //$NON-NLS-1$ //$NON-NLS-2$
        quoteElm.addAttribute("cite", getPathToSrc(src)); //$NON-NLS-1$
        quoteElm.addElement("p").addText(eText); //$NON-NLS-1$

        Element srcLinkParagraph = listItem.addElement("p"); //$NON-NLS-1$
        srcLinkParagraph.addText(Messages.getString("DiscussionPage.Source")).add(getLinkSrcElm(src)); //$NON-NLS-1$
    }

    return div;
}

---

From source file:lost.tok.html.DiscussionPage.java

License:Open Source License

/**
 * Creates a div element describing the given opinion
 * @param o the opinion to generate html div for
 * @return a div element that contains all the information relating the opinion
 */// ww w  .j a  v  a2 s  .  co  m
private Element getOpinionElement(Opinion o) {
    Element div = DocumentHelper.createElement("div"); //$NON-NLS-1$

    // 1. Create the title
    Element opTitle = div.addElement("h2"); //$NON-NLS-1$
    opTitle.addText(o.getName());
    opTitle.addAttribute("id", "discItem" + o.getId()); //$NON-NLS-1$ //$NON-NLS-2$

    Quote[] quotes = disc.getSortedQuotes(o.getName());

    // add quotes only if there are any
    if (quotes.length > 0) {
        Element quotesList = div.addElement("ul"); //$NON-NLS-1$

        // 2. Add the quotes
        for (Quote q : quotes) {
            // TODO(Shay, medium-low): Sort the quotes according to author importance

            Element listItem = quotesList.addElement("li"); //$NON-NLS-1$
            listItem.add(getQuoteElement(q));
        }
    }
    // TODO(Shay, low): Consider adding relation data

    return div;
}

---

From source file:lost.tok.html.DiscussionPage.java

License:Open Source License

/**
 * Creates a div element describing the given quote
 * @param q the quote to generate html div for
 * @return a div element that contains all the information relating the quote
 *///from  w w  w. j  a  v  a2 s. c o  m
private Element getQuoteElement(Quote q) {
    Element div = DocumentHelper.createElement("div"); //$NON-NLS-1$

    // 1. Get the quote's text and find a good title for it
    String qText = q.getText();
    int actualLen = qText.indexOf(' ', QUOTE_TITLE_LENGTH);
    actualLen = (actualLen != -1) ? actualLen : qText.length();
    String qTitle = qText.substring(0, actualLen);

    // 2. Get the src we should link to
    Source src = q.getSource();

    // 3. Add the title
    Element quoteTitle = div.addElement("h3"); //$NON-NLS-1$
    quoteTitle.addText(qTitle);
    quoteTitle.addAttribute("id", "discItem" + q.getID()); //$NON-NLS-1$ //$NON-NLS-2$

    // 4. Add the quote itself
    Element quoteElm = div.addElement("blockquote"); //$NON-NLS-1$
    quoteElm.addAttribute("class", "quote"); //$NON-NLS-1$ //$NON-NLS-2$
    quoteElm.addAttribute("cite", getPathToSrc(src)); //$NON-NLS-1$
    quoteElm.addElement("p").addText(qText); //$NON-NLS-1$

    // 5. Add a comment, if there is one
    if (!q.getComment().equals("")) //$NON-NLS-1$
    {
        Element pComment = div.addElement("p"); //$NON-NLS-1$
        pComment.addText(Messages.getString("DiscussionPage.Comment")); //$NON-NLS-1$
        pComment.addElement("em").addText(q.getComment()); //$NON-NLS-1$

        quoteElm.addAttribute("title", q.getComment()); //$NON-NLS-1$
    }

    // 6. Add a link to the related source
    Element srcLinkParagraph = div.addElement("p"); //$NON-NLS-1$
    srcLinkParagraph.addText(Messages.getString("DiscussionPage.From")).add(getLinkSrcElm(src)); //$NON-NLS-1$

    // TODO(Shay, low): 7. Consider adding relation data

    return div;
}

---

From source file:lost.tok.html.IndexPage.java

License:Open Source License

@Override
protected String getBody() {
    Element body = DocumentHelper.createElement("div"); //$NON-NLS-1$
    body.addAttribute("id", "index"); //$NON-NLS-1$ //$NON-NLS-2$
    body.addAttribute("class", "main_content"); //$NON-NLS-1$ //$NON-NLS-2$

    body.addElement("h1").addText(tok.getProject().getName()); //$NON-NLS-1$

    Element author = body.addElement("p").addText(Messages.getString("IndexPage.CreatedBy")); //$NON-NLS-1$ //$NON-NLS-2$
    author.addElement("em").addText(tok.getProjectCreator()); //$NON-NLS-1$

    body.add(getSourcesElement(true));
    body.add(getSourcesElement(false));//from w  w w.ja v  a  2s . c o m
    body.add(getDiscussionElement());

    return GeneralFunctions.elementToString(body);
}

---

From source file:lost.tok.Link.java

License:Open Source License

/**
 * Links an existing discussion to a segment in the root of the ToK project
 */// ww w  .  j  av a 2  s. c  o m
public void linkDiscussionRoot(Source linkedSource, LinkedList<Excerption> exp) {

    SubLink sl = new SubLink(linkedSource, exp);
    subLinkList.add(sl);

    String discFileName = linkedDiscussion.getDiscFileName();

    // Open the Links file
    Document doc = GeneralFunctions.readFromXML(linkFile);

    Node link = doc.selectSingleNode("//link/discussionFile[text()=\"" //$NON-NLS-1$
            + discFileName + "\"]"); //$NON-NLS-1$
    Element newLink = null;
    if (link != null) {
        newLink = link.getParent();
    } else {

        Element links = doc.getRootElement();
        newLink = links.addElement("link"); //$NON-NLS-1$
        newLink.addElement("discussionFile").addText(discFileName); //$NON-NLS-1$
        newLink.addElement("type").addText(linkTypeXML); //$NON-NLS-1$
        newLink.addElement("linkSubject").addText(subject); //$NON-NLS-1$
    }

    Element subLink = newLink.addElement("sublink"); //$NON-NLS-1$
    subLink.addElement("sourceFile").addText(linkedSource.toString()); //$NON-NLS-1$
    for (Excerption element : exp) {

        subLink.add(element.toXML());

    }

    GeneralFunctions.writeToXml(linkFile, doc);
}

---

From source file:main.FrevoMain.java

License:Open Source License

/**
 * Starts a saving procedure calling the method's own saveResults function.
 * Run-specific data will be added to the end of the file.
 * //from   www  .  j a va 2s.  c  o m
 * @param fileName
 *            Name of the saved file without the extension. (E.g.
 *            solution_generation_13)
 * @param method
 *            The corresponding method instance to be called for saving.
 */
public static File saveResult(String fileName, final Element representationRootElement, long startSeed,
        long currentActiveSeed) {
    // create new document for output
    Document doc = DocumentHelper.createDocument();
    doc.addDocType("frevo", null, System.getProperty("user.dir") + "//Components//ISave.dtd");
    Element dfrevo = doc.addElement("frevo");

    String fileLocation = "Undefined";

    // export sessionconfig
    Element sessionconfig = dfrevo.addElement("sessionconfig");

    // custom name
    Element configentry = sessionconfig.addElement("configentry");
    configentry.addAttribute("key", "CustomName");
    configentry.addAttribute("type", "STRING");
    configentry.addAttribute("value", customName);

    // number of runs
    Element runentry = sessionconfig.addElement("configentry");
    runentry.addAttribute("key", "NumberofRuns");
    runentry.addAttribute("type", "INT");
    runentry.addAttribute("value", Integer.toString(getNumberOfSimulationRuns()));

    // starting seed
    Element seedentry = sessionconfig.addElement("configentry");
    seedentry.addAttribute("key", "StartingSeed");
    seedentry.addAttribute("type", "LONG");
    // seedentry.addAttribute("value", Long.toString(getSeed()));
    seedentry.addAttribute("value", Long.toString(startSeed));

    // active seed
    Element aseedentry = sessionconfig.addElement("configentry");
    aseedentry.addAttribute("key", "CurrentSeed");
    aseedentry.addAttribute("type", "LONG");
    aseedentry.addAttribute("value", Long.toString(currentActiveSeed));

    try {
        // export problem
        Element problemsettings = dfrevo.addElement("problem");
        ComponentXMLData problem = FrevoMain.SELECTED_PROBLEM;
        problemsettings.addAttribute("class", problem.getClassName());
        Vector<String> keys = new Vector<String>(problem.getProperties().keySet());
        for (String k : keys) {
            Element entry = problemsettings.addElement("problementry");
            entry.addAttribute("key", k);
            entry.addAttribute("type", problem.getTypeOfProperty(k).toString());
            entry.addAttribute("value", problem.getValueOfProperty(k));
        }

        // export method
        Element methodsettings = dfrevo.addElement("method");
        ComponentXMLData method = FrevoMain.SELECTED_METHOD;
        methodsettings.addAttribute("class", method.getClassName());
        keys = new Vector<String>(method.getProperties().keySet());
        for (String k : keys) {
            Element entry = methodsettings.addElement("methodentry");
            entry.addAttribute("key", k);
            entry.addAttribute("type", method.getTypeOfProperty(k).toString());
            entry.addAttribute("value", method.getValueOfProperty(k));
        }

        // export ranking
        Element rankingsettings = dfrevo.addElement("ranking");
        ComponentXMLData ranking = FrevoMain.SELECTED_RANKING;
        rankingsettings.addAttribute("class", ranking.getClassName());
        keys = new Vector<String>(ranking.getProperties().keySet());
        for (String k : keys) {
            Element entry = rankingsettings.addElement("rankingentry");
            entry.addAttribute("key", k);
            entry.addAttribute("type", ranking.getTypeOfProperty(k).toString());
            entry.addAttribute("value", ranking.getValueOfProperty(k));
        }

        // export representation
        Element repsettings = dfrevo.addElement("representation");
        ComponentXMLData representation = FrevoMain.SELECTED_REPRESENTATION;
        repsettings.addAttribute("class", representation.getClassName());
        keys = new Vector<String>(representation.getProperties().keySet());
        for (String k : keys) {
            Element entry = repsettings.addElement("representationentry");
            entry.addAttribute("key", k);
            entry.addAttribute("type", representation.getTypeOfProperty(k).toString());
            entry.addAttribute("value", representation.getValueOfProperty(k));
        }

        // call method's own save solution
        dfrevo.add(representationRootElement);

        // save contents to file

        String location = FREVO_INSTALL_DIRECTORY + File.separator + "Results" + File.separator + customName;
        File rootSaveDir = new File(location);

        // remove spaces from filename
        fileName.replaceAll(" ", "_");

        // create save directory based on given custom name
        rootSaveDir.mkdirs();

        // create sub-directories for different seeds
        if (FrevoMain.getNumberOfSimulationRuns() > 1) {
            // create seed directory if there are more than one run
            File seedDir = new File(location + File.separator + "seed_" + startSeed);
            seedDir.mkdir();
            fileLocation = seedDir + File.separator + fileName + ".zre";
        } else {
            // save it the root location
            fileLocation = rootSaveDir + File.separator + fileName + ".zre";
        }

        File saveFile = new File(fileLocation);

        OutputFormat format = OutputFormat.createPrettyPrint();
        format.setLineSeparator(System.getProperty("line.separator"));

        saveFile.createNewFile();
        FileWriter out = new FileWriter(saveFile);
        BufferedWriter bw = new BufferedWriter(out);
        XMLWriter wr = new XMLWriter(bw, format);
        wr.write(doc);
        wr.close();
        System.out.println("XML Writing Completed: " + fileLocation);

        if (isFrevoWithGraphics()) {
            mainWindow.addRecentResult(saveFile);
        }
        return saveFile;
    } catch (OutOfMemoryError mem) {
        System.err.println("Could not export! (Out of memory)");
    } catch (IOException e) {
        System.err.println("IOException while writing to XML! Check path at: " + fileLocation);
        e.printStackTrace();
    }
    return null;
}

---

From source file:mesquite.chromaseq.lib.SequenceProfile.java

License:Open Source License

public String getXML() {
    Element mesquiteElement = DocumentHelper.createElement("mesquite");
    Document doc = DocumentHelper.createDocument(mesquiteElement);
    Element sequenceProfileElement = DocumentHelper.createElement("sequenceProfile");
    mesquiteElement.add(sequenceProfileElement);
    XMLUtil.addFilledElement(sequenceProfileElement, "version", "1");
    Element boundedByTokensElement = DocumentHelper.createElement("boundedByTokens");
    sequenceProfileElement.add(boundedByTokensElement);
    XMLUtil.addFilledElement(boundedByTokensElement, "name", name);
    XMLUtil.addFilledElement(boundedByTokensElement, "description", DocumentHelper.createCDATA(description));
    XMLUtil.addFilledElement(boundedByTokensElement, "location", DocumentHelper.createCDATA(location));
    XMLUtil.addFilledElement(boundedByTokensElement, "moltype", DocumentHelper.createCDATA(moltype));
    XMLUtil.addFilledElement(boundedByTokensElement, "productName", DocumentHelper.createCDATA(productName));
    XMLUtil.addFilledElement(boundedByTokensElement, "seqIDSuffix", DocumentHelper.createCDATA(seqIDSuffix));
    XMLUtil.addFilledElement(boundedByTokensElement, "gcode", DocumentHelper.createCDATA("" + gcode));
    XMLUtil.addFilledElement(boundedByTokensElement, "note", DocumentHelper.createCDATA("" + note));
    //      XMLUtil.addFilledElement(boundedByTokensElement, "CDS",DocumentHelper.createCDATA(MesquiteBoolean.toTrueFalseString(CDS)));
    return XMLUtil.getDocumentAsXMLString(doc);
}

---

From source file:mesquite.chromaseq.SampleAndPrimerFileNameParser.ChromFileNameParsing.java

License:Open Source License

public String getXML() {
    Element mesquiteElement = DocumentHelper.createElement("mesquite");
    Document doc = DocumentHelper.createDocument(mesquiteElement);
    Element nameRules = DocumentHelper.createElement("chromFileNameParsingRules");
    mesquiteElement.add(nameRules);
    XMLUtil.addFilledElement(nameRules, "version", "1");
    Element boundedByTokensElement = DocumentHelper.createElement("boundedByTokens");
    nameRules.add(boundedByTokensElement);
    XMLUtil.addFilledElement(boundedByTokensElement, "name", name);
    XMLUtil.addFilledElement(boundedByTokensElement, "sampleCodeFirst",
            MesquiteBoolean.toTrueFalseString(sampleCodeFirst));
    XMLUtil.addFilledElement(boundedByTokensElement, "dnaCodeStartToken",
            DocumentHelper.createCDATA(dnaCodeStartToken));
    XMLUtil.addFilledElement(boundedByTokensElement, "dnaCodeEndToken",
            DocumentHelper.createCDATA(dnaCodeEndToken));
    XMLUtil.addFilledElement(boundedByTokensElement, "dnaCodeSuffixToken",
            DocumentHelper.createCDATA(dnaCodeSuffixToken));
    XMLUtil.addFilledElement(boundedByTokensElement, "dnaCodeRemovalToken",
            DocumentHelper.createCDATA(dnaCodeRemovalToken));
    XMLUtil.addFilledElement(boundedByTokensElement, "primerStartToken",
            DocumentHelper.createCDATA(primerStartToken));
    XMLUtil.addFilledElement(boundedByTokensElement, "primerEndToken",
            DocumentHelper.createCDATA(primerEndToken));
    return XMLUtil.getDocumentAsXMLString(doc);
}

---

From source file:mesquite.lib.MesquiteXMLPreferencesModule.java

License:Open Source License

/**
 * Ideally this should not be static but since we don't always have control over the superclass,
 * make it available for classes that might otherwise not be able to use it due to inheritance
 * constraints/*w  w  w  .  ja  v  a  2s  .  c om*/
 * @param provider
 * @param versionInt
 * @return
 */
public static String preparePreferencesForXML(PropertyNamesProvider provider, int versionInt) {
    String[] propertyNames = provider.getPreferencePropertyNames();
    Element rootElement = DocumentHelper.createElement("mesquite");
    Document preferencesDoc = DocumentHelper.createDocument(rootElement);
    preferencesDoc.setRootElement(rootElement);
    Element classElement = DocumentHelper.createElement(getShortClassName(provider.getClass()));
    rootElement.add(classElement);
    Element versionElement = DocumentHelper.createElement(VERSION);
    versionElement.setText("" + versionInt);
    classElement.add(versionElement);
    for (int i = 0; i < propertyNames.length; i++) {
        String currentPropertyName = propertyNames[i];
        try {
            Object prefsContent = PropertyUtils.read(provider, currentPropertyName);
            if (prefsContent != null) {
                Element nextPrefsElement = DocumentHelper.createElement(PREFERENCE);
                nextPrefsElement.addAttribute(KEY, currentPropertyName);
                nextPrefsElement.add(DocumentHelper.createCDATA(prefsContent.toString()));
                classElement.add(nextPrefsElement);
            }
        } catch (Exception e) {
            MesquiteMessage.warnProgrammer("Could not read property value " + currentPropertyName
                    + " for writing xml preferences on module: " + provider);
        }
        //nextPrefsElement.addContent(new CDATA())
    }
    return XMLUtil.getDocumentAsXMLString(preferencesDoc);
}

---

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