Example usage for org.apache.commons.lang StringUtils splitPreserveAllTokens

Introduction

In this page you can find the example usage for org.apache.commons.lang StringUtils splitPreserveAllTokens.

Prototype

public static String[] splitPreserveAllTokens(String str, String separatorChars) 

Source Link

Document

Splits the provided text into an array, separators specified, preserving all tokens, including empty tokens created by adjacent separators.

Usage

From source file:org.openflamingo.fs.hdfs.HdfsFileSystemServiceImpl.java

@Override
public List<String> copyFiles(Context context, FileSystemCommand command) {
    ResourceBundleRetreiver bundle = getResourceBundle(context);
    String[] paths = StringUtils.splitPreserveAllTokens(context.getString("hdfs.delete.forbidden.paths"), ",");
    AntPathMatcher antPathMatcher = new AntPathMatcher();
    for (String path : paths) {
        String destinationPath = command.getString("to");
        String pathToValid = FileUtils.getPath(destinationPath);
        boolean isMatch = antPathMatcher.match(path, pathToValid);
        if (isMatch) {
            throw new FileSystemException(
                    bundle.message("S_FS_SERVICE", "INCLUDED_FOBIDDEN_RULES", pathToValid));
        }/*from   w ww.  ja  v  a  2  s. c om*/
    }

    try {
        FileSystemProvider provider = getFileSystemProvider(context);
        List<String> ps = (List<String>) command.getObject("from");
        List<String> copied = new ArrayList();
        for (String p : ps) {
            long length = getFileInfo(context, p).getLength();
            boolean isCopied = provider.copy(p, command.getString("to"));
            if (isCopied) {
                copied.add(p);
                auditService.log(context, FileSystemType.HDFS, AuditType.COPY, FileType.FILE, p,
                        command.getString("to"), length);
            }
        }
        return copied;
    } catch (Exception ex) {
        throw new FileSystemException(bundle.message("S_FS_SERVICE", "CANNOT_COPY_FILE"), ex);
    }
}

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From source file:org.openflamingo.fs.hdfs.HdfsFileSystemServiceImpl.java

@Override
public List<String> moveFiles(Context context, FileSystemCommand command) {
    ResourceBundleRetreiver bundle = getResourceBundle(context);
    String[] paths = StringUtils.splitPreserveAllTokens(context.getString("hdfs.delete.forbidden.paths"), ",");
    AntPathMatcher antPathMatcher = new AntPathMatcher();
    for (String path : paths) {
        String pathToValid = command.getString("to");
        boolean isMatch = antPathMatcher.match(path, pathToValid);
        if (isMatch) {
            throw new FileSystemException(
                    bundle.message("S_FS_SERVICE", "INCLUDED_FOBIDDEN_RULES", pathToValid));
        }//  ww  w. j a  v  a  2 s .  co  m
    }

    for (String path : paths) {
        String destinationPath = ((List<String>) command.getObject("from")).get(0);
        String pathToValid = FileUtils.getPath(destinationPath);
        boolean isMatch = antPathMatcher.match(path, pathToValid);
        if (isMatch) {
            throw new FileSystemException(
                    bundle.message("S_FS_SERVICE", "INCLUDED_FOBIDDEN_RULES", pathToValid));
        }
    }

    try {
        FileSystemProvider provider = getFileSystemProvider(context);
        List<String> ps = (List<String>) command.getObject("from");
        List<String> moved = new ArrayList();
        for (String p : ps) {
            long length = getFileInfo(context, p).getLength();
            boolean isMoved = provider.move(p, command.getString("to"));
            if (isMoved) {
                moved.add(p);
                auditService.log(context, FileSystemType.HDFS, AuditType.MOVE, FileType.FILE, p,
                        command.getString("to"), length);
            }
        }
        return moved;
    } catch (Exception ex) {
        throw new FileSystemException(bundle.message("S_FS_SERVICE", "CANNOT_MOVE_FILE"), ex);
    }
}

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From source file:org.openflamingo.fs.hdfs.HdfsFileSystemServiceImpl.java

@Override
public List<String> deleteFiles(Context context, FileSystemCommand command) {
    ResourceBundleRetreiver bundle = getResourceBundle(context);
    String[] paths = StringUtils.splitPreserveAllTokens(context.getString("hdfs.delete.forbidden.paths"), ",");
    AntPathMatcher antPathMatcher = new AntPathMatcher();
    String first = ((List<String>) command.getObject("path")).get(0);
    for (String path : paths) {
        String pathToValid = FileUtils.getPath(first);
        boolean isMatch = antPathMatcher.match(path, pathToValid);
        if (isMatch) {
            throw new FileSystemException(
                    bundle.message("S_FS_SERVICE", "INCLUDED_FOBIDDEN_RULES", pathToValid));
        }//from   w  ww. ja v  a2 s .co  m
    }
    try {
        FileSystemProvider provider = getFileSystemProvider(context);
        List<String> ps = (List<String>) command.getObject("path");
        List<String> deleted = new ArrayList();
        for (String p : ps) {
            long length = getFileInfo(context, p).getLength();
            boolean isDeleted = provider.delete(p);
            if (isDeleted) {
                deleted.add(p);
                auditService.log(context, FileSystemType.HDFS, AuditType.DELETE, FileType.FILE, p, "", length);
            }
        }
        return deleted;
    } catch (Exception ex) {
        throw new FileSystemException(bundle.message("S_FS_SERVICE", "CANNOT_DELETE_FILE"), ex);
    }
}

---

From source file:org.openflamingo.fs.hdfs.HdfsFileSystemServiceImpl.java

@Override
public boolean save(Context context, FileSystemCommand command) {
    ResourceBundleRetreiver bundle = getResourceBundle(context);
    String[] paths = StringUtils.splitPreserveAllTokens(context.getString("hdfs.delete.forbidden.paths"), ",");
    AntPathMatcher antPathMatcher = new AntPathMatcher();
    for (String path : paths) {
        String pathToValid = command.getString("path");
        boolean isMatch = antPathMatcher.match(path, pathToValid);
        if (isMatch) {
            throw new FileSystemException(
                    bundle.message("S_FS_SERVICE", "INCLUDED_FOBIDDEN_RULES", pathToValid));
        }//from w ww .j  a v  a2  s  .  c om
    }

    FileSystemProvider provider = getFileSystemProvider(context);

    if (provider.exists(command.getString("path"))) {
        throw new FileSystemException(bundle.message("S_FS_SERVICE", "ALREADY_EXISTS_FILE"));
    }

    try {
        boolean saved = provider.save(command.getString("path"), (byte[]) command.getObject("content"));
        auditService.log(context, FileSystemType.HDFS, AuditType.UPLOAD, FileType.FILE,
                command.getString("path"), "", getFileInfo(context, command.getString("path")).getLength());
        return saved;
    } catch (Exception ex) {
        throw new FileSystemException(bundle.message("S_FS_SERVICE", "CANNOT_UPLOAD"), ex);
    }
}

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From source file:org.openflamingo.uploader.el.ELService.java

/**
 * Comma Separated String?  ./*from  w  w  w  .  j  a v  a 2  s .c  o m*/
 *   Trim  .
 *
 * @param commaSeparatedList Comma Separated String
 * @return ? 
 */
private String[] split(String commaSeparatedList) {
    List<String> params = new ArrayList<String>();
    String[] values = StringUtils.splitPreserveAllTokens(commaSeparatedList.trim(), ",");
    for (String value : values) {
        params.add(value.trim());
    }
    return org.openflamingo.uploader.util.StringUtils.collectionToStringArray(params);
}

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From source file:org.openmrs.module.clinicalsummary.evaluator.VelocityEvaluatorTest.java

public void evaluate_shouldSubstituteString() throws Exception {
    File directory = new File("/home/nribeka/Desktop/Yaw");

    File substitutionFile = new File(directory, "substitute.txt");

    Map<String, String> substitutes = new HashMap<String, String>();
    // read and create the substitution map
    String line = null;/*from   www .j a va 2 s . c  o m*/
    BufferedReader reader = new BufferedReader(new FileReader(substitutionFile));
    while ((line = reader.readLine()) != null) {
        String[] elements = StringUtils.split(line, ",");
        if (elements.length == 2)
            substitutes.put(elements[0], elements[1]);
    }
    reader.close();

    // start reading and substitute the file
    FileFilter fileFilter = new WildcardFileFilter("invalid*.txt");
    for (File file : directory.listFiles(fileFilter)) {
        System.out.println(file.getName());

        File outputFile = new File(directory, FilenameUtils.getBaseName(file.getName()));

        BufferedReader bufferedReader = new BufferedReader(new FileReader(file));
        BufferedWriter bufferedWriter = new BufferedWriter(new FileWriter(outputFile));

        String invalidLine = null;
        while ((invalidLine = bufferedReader.readLine()) != null) {
            System.out.println(invalidLine);
            String[] elements = StringUtils.splitPreserveAllTokens(invalidLine, ",");
            StringBuilder builder = new StringBuilder();
            if (substitutes.containsKey(elements[0]))
                builder.append(substitutes.get(elements[0]));
            else
                builder.append(elements[0]);
            builder.append(",");
            builder.append(elements[1]);
            bufferedWriter.write(builder.toString());
            bufferedWriter.newLine();
        }

        bufferedReader.close();
        bufferedWriter.close();
    }
}

---

From source file:org.openmrs.module.clinicalsummary.web.controller.service.ResponseController.java

private void processResponse(final UtilService utilService, final String[] parameterValues,
        final Patient patient) {
    for (String parameterValue : parameterValues) {
        try {//w ww .j a va  2  s .  c o  m
            String[] parameter = StringUtils.splitPreserveAllTokens(parameterValue, "|");
            if (StringUtils.equalsIgnoreCase(HEADER_REMINDER, parameter[0]))
                saveReminderResponse(utilService, patient, parameter);
            else if (StringUtils.equalsIgnoreCase(HEADER_ARV_MEDICATION, parameter[0])
                    || StringUtils.equalsIgnoreCase(HEADER_OI_MEDICATION, parameter[0]))
                saveMedicationResponse(utilService, patient, parameter);
        } catch (ConstraintViolationException e) {
            log.info("Ignoring constrain violation and skipping the record");
        }
    }
}

---

From source file:org.openmrs.module.clinicalsummary.web.controller.service.ResponseController.java

private void processDeviceLogs(final UtilService utilService, final String id, final String[] parameterValues) {
    for (String parameterValue : parameterValues) {
        String[] parameter = StringUtils.splitPreserveAllTokens(parameterValue, "|");
        if (StringUtils.equalsIgnoreCase(HEADER_LOG, parameter[0]))
            try {
                DeviceLog deviceLog = new DeviceLog();
                deviceLog.setDeviceId(id);
                deviceLog.setKey(parameter[1]);
                deviceLog.setValue(parameter[2]);
                deviceLog.setTimestamp(parameter[3]);
                deviceLog.setUser(Context.getAuthenticatedUser().getPerson());
                utilService.saveDeviceLog(deviceLog);
            } catch (ConstraintViolationException e) {
                log.info("Ignoring constrain violation and skipping the record");
            }//  w w w .  j  a va  2s . c om
    }
}

---

From source file:org.openmrs.module.clinicalsummary.web.controller.utils.ExtendedDataEncounterController.java

@RequestMapping(method = RequestMethod.POST)
public void processSubmit(final @RequestParam(required = true, value = "data") MultipartFile data,
        final @RequestParam(required = true, value = "conceptNames") String conceptNames,
        final HttpServletResponse response) throws IOException {

    List<Concept> concepts = new ArrayList<Concept>();
    for (String conceptName : StringUtils.splitPreserveAllTokens(conceptNames, ",")) {
        Concept concept = Context.getConceptService().getConcept(conceptName);
        if (concept != null)
            concepts.add(concept);/*from   w w w  .  ja  va  2 s.  c o  m*/
    }

    PatientService patientService = Context.getPatientService();
    PatientSetService patientSetService = Context.getPatientSetService();

    File identifierData = File.createTempFile(STUDY_DATA, INPUT_PREFIX);
    OutputStream identifierDataStream = new BufferedOutputStream(new FileOutputStream(identifierData));
    FileCopyUtils.copy(data.getInputStream(), identifierDataStream);

    File extendedData = File.createTempFile(STUDY_DATA, OUTPUT_PREFIX);
    BufferedWriter writer = new BufferedWriter(new FileWriter(extendedData));

    String line;
    BufferedReader reader = new BufferedReader(new FileReader(identifierData));
    while ((line = reader.readLine()) != null) {
        Patient patient = null;

        String[] elements = StringUtils.splitPreserveAllTokens(line, ",");
        try {
            if (isDigit(StringUtils.trim(elements[1])))
                patient = patientService.getPatient(NumberUtils.toInt(elements[1]));
            else {
                Cohort cohort = patientSetService.convertPatientIdentifier(Arrays.asList(elements[1]));
                for (Integer patientId : cohort.getMemberIds()) {
                    Patient cohortPatient = patientService.getPatient(patientId);
                    if (cohortPatient != null && !cohortPatient.isVoided())
                        patient = cohortPatient;
                }
            }
        } catch (Exception e) {
            log.error("Unable to resolve patients!", e);
        }

        Date referenceDate = WebUtils.parse(elements[2], "MM/dd/yyyy", new Date());

        if (patient != null) {
            ExtendedData extended = new ExtendedData(patient, referenceDate);
            extended.setEncounters(searchEncounters(patient));
            for (Concept concept : concepts)
                extended.addObservations(concept, searchObservations(patient, concept));
            writer.write(extended.generateEncounterData());
            writer.newLine();

            ResultCacheInstance.getInstance().clearCache(patient);
        } else {
            writer.write("Unresolved patient id or patient identifier for " + elements[1]);
            writer.newLine();
        }
    }

    reader.close();
    writer.close();

    InputStream inputStream = new BufferedInputStream(new FileInputStream(extendedData));

    response.setHeader("Content-Disposition", "attachment; filename=generated-" + data.getOriginalFilename());
    response.setContentType("text/plain");
    FileCopyUtils.copy(inputStream, response.getOutputStream());
}

---

From source file:org.openmrs.module.clinicalsummary.web.controller.utils.ExtendedDataGeneralController.java

@RequestMapping(method = RequestMethod.POST)
public void processRequest(final @RequestParam(required = true, value = "data") MultipartFile data,
        final @RequestParam(required = true, value = "conceptNames") String conceptNames,
        final HttpServletResponse response) throws IOException {

    List<Concept> concepts = new ArrayList<Concept>();
    for (String conceptName : StringUtils.splitPreserveAllTokens(conceptNames, ",")) {
        Concept concept = Context.getConceptService().getConcept(conceptName);
        if (concept != null)
            concepts.add(concept);/*from   w w  w . ja  v a 2 s .  c o  m*/
    }

    PatientService patientService = Context.getPatientService();
    PatientSetService patientSetService = Context.getPatientSetService();

    File identifierData = File.createTempFile(STUDY_DATA, INPUT_PREFIX);
    OutputStream identifierDataStream = new BufferedOutputStream(new FileOutputStream(identifierData));
    FileCopyUtils.copy(data.getInputStream(), identifierDataStream);

    File extendedData = File.createTempFile(STUDY_DATA, OUTPUT_PREFIX);
    BufferedWriter writer = new BufferedWriter(new FileWriter(extendedData));

    String line;
    BufferedReader reader = new BufferedReader(new FileReader(identifierData));
    while ((line = reader.readLine()) != null) {
        Patient patient = null;
        if (isDigit(StringUtils.trim(line)))
            patient = patientService.getPatient(NumberUtils.toInt(line));
        else {
            Cohort cohort = patientSetService.convertPatientIdentifier(Arrays.asList(line));
            for (Integer patientId : cohort.getMemberIds()) {
                Patient cohortPatient = patientService.getPatient(patientId);
                if (cohortPatient != null && !cohortPatient.isVoided())
                    patient = cohortPatient;
            }
        }

        if (patient != null) {
            ExtendedData extended = new ExtendedData(patient, null);
            extended.setEncounters(searchEncounters(patient));
            for (Concept concept : concepts)
                extended.addObservations(concept, searchObservations(patient, concept));
            writer.write(extended.generatePatientData());
            writer.newLine();

            ResultCacheInstance.getInstance().clearCache(patient);
        } else {
            writer.write("Unresolved patient id or patient identifier for " + line);
            writer.newLine();
        }
    }
    reader.close();
    writer.close();

    InputStream inputStream = new BufferedInputStream(new FileInputStream(extendedData));

    response.setHeader("Content-Disposition", "attachment; filename=" + data.getName());
    response.setContentType("text/plain");
    FileCopyUtils.copy(inputStream, response.getOutputStream());
}

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