List of usage examples for org.apache.commons.io FileUtils isFileNewer
public static boolean isFileNewer(File file, long timeMillis)
File is newer than the specified time reference. From source file:edu.cornell.med.icb.goby.modes.FastaToCompactMode.java
private void processOneFile(final int loopIndex, final int length, final String inputFilename, final Properties keyValueProps) throws IOException { String outputFilename;//from www. j a v a 2 s . c o m if (loopIndex == 0 && inputFilenames.length == 1 && StringUtils.isNotBlank(reqOutputFilename)) { outputFilename = reqOutputFilename; } else { outputFilename = stripFastxExtensions(inputFilename) + ".compact-reads"; if (processPairs) { // remove _1 from the destination compact filename but only if the output filename // was generated automatically. outputFilename = pairOutputFilename(outputFilename); } } final File output = new File(outputFilename); final File readsFile = new File(inputFilename); if (!output.exists() || FileUtils.isFileNewer(readsFile, output) || output.length() == 0 || force) { System.out.println("Creating file " + outputFilename); convert(loopIndex, length, inputFilename, outputFilename, keyValueProps); } else { System.out.printf("Skipping file that already exists %s%n", outputFilename); } }
From source file:net.sf.zekr.common.config.ApplicationConfig.java
@SuppressWarnings("unchecked") private void extractViewProps() { ThemeData td;//from www . ja v a 2s.c o m Reader reader; String def = props.getString("theme.default"); logger.info("Loading theme .properties files."); String[] paths = { ApplicationPath.THEME_DIR, Naming.getThemeDir() }; for (int pathIndex = 0; pathIndex < paths.length; pathIndex++) { File targetThemeDir = new File(paths[pathIndex]); if (!targetThemeDir.exists()) { continue; } logger.info("Loading theme files info from \"" + paths[pathIndex]); File[] targetThemes = targetThemeDir.listFiles(); File origThemeDir = new File(paths[pathIndex]); File[] origThemes = origThemeDir.listFiles(); for (int i = 0; i < origThemes.length; i++) { String targetThemeDesc = Naming.getThemePropsDir() + "/" + origThemes[i].getName() + ".properties"; File origThemeDesc = new File(origThemes[i] + "/" + ApplicationPath.THEME_DESC); File targetThemeFile = new File(targetThemeDesc); if (!origThemeDesc.exists()) { logger.warn("\"" + origThemes[i] + "\" is not a standard theme! Will ignore it."); continue; } try { if (!targetThemeFile.exists() || FileUtils.isFileNewer(origThemeDesc, targetThemeFile)) { logger.info("Copy theme " + origThemes[i].getName() + " to " + Naming.getThemePropsDir()); FileUtils.copyFile(origThemeDesc, targetThemeFile); } FileInputStream fis = new FileInputStream(targetThemeFile); reader = new InputStreamReader(fis, "UTF-8"); PropertiesConfiguration pc = new PropertiesConfiguration(); pc.load(reader); reader.close(); fis.close(); td = new ThemeData(); td.props = new LinkedHashMap<String, String>(); // order is important for options table! for (Iterator<String> iter = pc.getKeys(); iter.hasNext();) { String key = iter.next(); td.props.put(key, CollectionUtils.toString(pc.getList(key), ", ")); } td.author = pc.getString("author"); td.name = pc.getString("name"); td.version = pc.getString("version"); td.id = origThemes[i].getName(); td.fileName = targetThemeFile.getName(); td.baseDir = paths[pathIndex]; td.props.remove("author"); td.props.remove("name"); td.props.remove("version"); // extractTransProps must be called before it! if (getTranslation().getDefault() != null) { td.process(getTranslation().getDefault().locale.getLanguage()); } else { td.process("en"); } theme.add(td); if (td.id.equals(def)) { theme.setCurrent(td); } } catch (Exception e) { logger.warn("Can not load theme \"" + targetThemes[i].getName() + "\", because of the following exception:"); logger.log(e); } } } if (theme.getCurrent() == null) { logger.doFatal(new ZekrBaseException("Could not find default theme: " + def)); } }
From source file:org.apache.maven.plugins.jacorb.JacorbPlugin.java
public void execute() throws MojoExecutionException { File timestampFile = new File(getTstamp()); File schemaFile = new File(getSchema()); if ((!timestampFile.exists()) || (timestampFile.exists() && !FileUtils.isFileNewer(timestampFile, schemaFile))) { try {/* www .j a v a 2s .co m*/ File tstampDir = new File(getTstampDirectory()); FileUtils.forceMkdir(tstampDir); FileUtils.touch(timestampFile); } catch (IOException e) { throw new MojoExecutionException(e.getMessage()); } ArrayList a = new ArrayList(); if (!schemaHasNoValue()) { a.add("-i" + getSchema()); } a.add("-f"); if (!packagingHasNoValue()) { a.add("-package" + getPackaging()); } if (!typesHasNoValue()) { a.add("-types" + getTypes()); } if (marshal) { a.add("-nomarshall"); } if (!destHasNoValue()) { a.add("-dest" + getDest()); } // SourceGenerator sourceGenerator = new SourceGenerator(); String args[] = new String[a.size()]; for (int i = 0; i < a.size(); i++) { args[i] = (String) a.get(i); } // sourceGenerator.main( args ); } else { getLog().info("Schema is up to date. Did not generate source files. Delete " + getTstamp() + " if you want to force source generation."); } }
From source file:org.artifactory.backup.BackupServiceImpl.java
@Override public void cleanupOldBackups(Date now, String backupKey) { BackupDescriptor descriptor = getBackup(backupKey); if (descriptor == null) { return;//from w w w . j a v a 2 s .c om } int retentionPeriodHours = descriptor.getRetentionPeriodHours(); //No action if retention is 0 (or less) if (retentionPeriodHours <= 0) { return; } File backupDir = getBackupDir(descriptor); File[] children = backupDir.listFiles(); if (children == null || CollectionUtils.isNullOrEmpty(children)) { log.debug("No old backup files to remove."); return; } //Calculate last valid time Calendar calendar = Calendar.getInstance(); calendar.setTime(now); calendar.add(Calendar.HOUR, -retentionPeriodHours); Date validFrom = calendar.getTime(); log.debug("Removing backups older than {}.", validFrom); //Delete anything not newer than the last valid time for (File child : children) { if (!FileUtils.isFileNewer(child, validFrom)) { try { log.debug("Removing old backup file '{}'.", child.getPath()); FileUtils.forceDelete(child); } catch (IOException e) { log.warn("Failed to remove old backup file or folder '" + child.getPath() + "'.", e); } } else { log.debug("Skipping new backup file '{}'.", child.getPath()); } } }
From source file:org.codehaus.mojo.latex.LaTeXMojo.java
private boolean requiresBuilding(File dir, File pdfFile) throws IOException { Collection texFiles = FileUtils.listFiles(dir, new String[] { "tex", "bib" }, true); getLog().info(texFiles.toString());/*w ww.ja v a2s .c o m*/ if (pdfFile.exists()) { boolean upToDate = true; Iterator it = texFiles.iterator(); while (it.hasNext() && upToDate) { File file = (File) it.next(); if (FileUtils.isFileNewer(file, pdfFile)) { if (getLog().isInfoEnabled()) { getLog().info("Changes detected on " + file.getAbsolutePath()); } return true; } if (getLog().isInfoEnabled()) { getLog().info("No change detected on " + file.getAbsolutePath()); } } if (getLog().isInfoEnabled()) { getLog().info("Skipping: no LaTeX changes detected in " + dir.getCanonicalPath()); } return false; } else { return true; } }
From source file:org.eclipse.smarthome.model.core.internal.folder.FolderObserver.java
private void checkFolder(String foldername) { File folder = getFolder(foldername); if (!folder.exists()) { return;// ww w. j a v a 2s.co m } String[] extensions = folderFileExtMap.get(foldername); // check current files and add or refresh them accordingly Set<String> currentFileNames = new HashSet<String>(); for (File file : folder.listFiles()) { if (file.isDirectory()) continue; if (!file.getName().contains(".")) continue; if (file.getName().startsWith(".")) continue; // if there is an extension filter defined, continue if the file has a different extension String fileExt = getExtension(file.getName()); if (extensions != null && extensions.length > 0 && !ArrayUtils.contains(extensions, fileExt)) continue; currentFileNames.add(file.getName()); Long timeLastCheck = lastCheckedMap.get(file.getName()); if (timeLastCheck == null) timeLastCheck = 0L; if (FileUtils.isFileNewer(file, timeLastCheck)) { if (modelRepo != null) { try { if (modelRepo.addOrRefreshModel(file.getName(), FileUtils.openInputStream(file))) { lastCheckedMap.put(file.getName(), new Date().getTime()); } } catch (IOException e) { logger.warn("Cannot open file '" + file.getAbsolutePath() + "' for reading.", e); } } } } // check for files that have been deleted meanwhile if (lastFileNames.get(foldername) != null) { ; for (String fileName : lastFileNames.get(foldername)) { if (!currentFileNames.contains(fileName)) { logger.info("File '{}' has been deleted", fileName); if (modelRepo != null) { modelRepo.removeModel(fileName); } } } } lastFileNames.put(foldername, currentFileNames); }
From source file:org.gdms.maven.sql.AbstractGenerateSql.java
protected void doExecute(File sqlScriptsDirectory, File outputDirectory) throws MojoExecutionException, MojoFailureException { MavenLogAppender.startPluginLog(this); try {//from ww w . j av a 2 s . com final String inputPath = sqlScriptsDirectory.getAbsolutePath(); getLog().info(String.format("Processing folder %s", inputPath)); if (!sqlScriptsDirectory.exists()) { // nothing to do, no valid input directory getLog().warn("Directory does not exist! Nothing to do."); return; } Collection<File> fil = FileUtils.listFiles(sqlScriptsDirectory, new String[] { "sql" }, true); int size = fil.size(); if (size == 0) { // nothing to do, no files... getLog().warn("Found 0 sql files! Nothing to do."); } else { // be sure the output dir exists if (!outputDirectory.exists()) { outputDirectory.mkdirs(); } List<File> changedFiles = new ArrayList<File>(); for (File ff : fil) { File tff = getTargetFile(inputPath, outputDirectory, ff); if (!tff.exists() || FileUtils.isFileNewer(ff, tff)) { changedFiles.add(ff); } } if (changedFiles.isEmpty()) { getLog().info("Nothing to compile - all compiled scripts are up to date"); } else if (changedFiles.size() != size) { getLog().info(String.format("Compiling %d changed sql files out of %d to %s", changedFiles.size(), size, outputDirectory.getAbsolutePath())); } else { getLog().info( String.format("Compiling %d sql files to %s", size, outputDirectory.getAbsolutePath())); } Properties props = DataSourceFactory.getDefaultProperties(); if (engineProperties != null) { props = new Properties(props); for (String k : engineProperties.stringPropertyNames()) { props.setProperty(k, engineProperties.getProperty(k)); } } if (getLog().isDebugEnabled()) { // display properties Log log = getLog(); log.debug("Engine invocation properties:"); if (engineProperties == null) { log.debug("No custom properties. Using Default:"); } else { log.debug("Custom properties:"); printProperties(engineProperties); log.debug("Merged with default properties:"); } printProperties(props); } int errors = 0; for (File ff : changedFiles) { if (getLog().isDebugEnabled()) { getLog().debug("Parsing script " + ff.getAbsolutePath()); } SQLScript s; try { s = Engine.parseScript(ff, props); } catch (Exception e) { if (errors == 0) { getLog().info("---------------------------------------"); getLog().error("COMPILATION ERROR :"); getLog().info("---------------------------------------"); } errors++; getLog().error(e.getLocalizedMessage()); getLog().info(String.format("location: %s", ff.getAbsolutePath())); if (e instanceof ParseException) { ParseException p = (ParseException) e; getLog().info(p.getLocation().prettyPrint()); } getLog().debug(e); getLog().info("---------------------------------------"); continue; } File targetFile = getTargetFile(inputPath, outputDirectory, ff); // create parent directory. Might not exist targetFile.getParentFile().mkdirs(); // delete existing compiled script if (targetFile.exists()) { targetFile.delete(); } try { s.save(new FileOutputStream(targetFile)); } catch (IOException ex) { // this is not good, let's abort throw new MojoExecutionException( String.format("Error while saving to '%s'", targetFile.getAbsolutePath()), ex); } } if (errors != 0) { getLog().info(String.format("%d errors", errors)); String errorStr; if (errors == 1) { errorStr = "There was 1 SQL build error!"; } else { errorStr = String.format("There were %d SQL build errors!", errors); } throw new MojoFailureException(errorStr + " See above for more details."); } } } finally { MavenLogAppender.endPluginLog(this); } }
From source file:org.mitre.mpf.mvc.util.tailer.MpfLogTailer.java
/** * Follows changes in the file, calling the MpfLogTailerListener's handle method for each new line. * * @param maxLines The maximum number of lines to read * @return The number of lines read//from w w w .j a va 2 s .co m */ public int readLines(int maxLines) { int numLines = 0; try { // Open the file if (reader == null) { try { reader = new RandomAccessFile(file, RAF_MODE); } catch (FileNotFoundException e) { listener.fileNotFound(); } if (reader != null) { if (lastChecked == -1) { lastChecked = System.currentTimeMillis(); } if (position == -1) { position = end ? file.length() : 0; } reader.seek(position); } } // Get new content boolean newer = FileUtils.isFileNewer(file, lastChecked); // IO-279, must be done first // Check the file length to see if it was rotated long length = file.length(); if (length < position) { // File was rotated listener.fileRotated(); // Reopen the reader after rotation try { // Ensure that the old file is closed iff we re-open it successfully RandomAccessFile save = reader; reader = new RandomAccessFile(file, RAF_MODE); position = 0; // close old file explicitly rather than relying on GC picking up previous RAF IOUtils.closeQuietly(save); } catch (FileNotFoundException e) { // in this case we continue to use the previous reader and position values listener.fileNotFound(); } return readLines(maxLines); // start over with rotated file } else { // File was not rotated // See if the file needs to be read again if (length > position) { // The file has more content than it did last time numLines = readLines(reader, maxLines); lastChecked = System.currentTimeMillis(); } else if (newer) { /* * This can happen if the file is truncated or overwritten with the exact same length of * information. In cases like this, the file position needs to be reset */ position = 0; reader.seek(position); // cannot be null here // Now we can read new lines numLines = readLines(reader, maxLines); lastChecked = System.currentTimeMillis(); } } if (reOpen) { IOUtils.closeQuietly(reader); } if (reOpen) { reader = new RandomAccessFile(file, RAF_MODE); reader.seek(position); } } catch (Exception e) { listener.handle(e); } return numLines; }
From source file:org.openhab.model.core.internal.folder.FolderObserver.java
private void checkFolder(String foldername) { File folder = getFolder(foldername); if (!folder.exists()) { return;//from w w w. j a v a 2s . co m } String[] extensions = folderFileExtMap.get(foldername); // check current files and add or refresh them accordingly Set<String> currentFileNames = new HashSet<String>(); for (File file : folder.listFiles()) { if (file.isDirectory()) continue; if (!file.getName().contains(".")) continue; if (file.getName().startsWith(".")) continue; // if there is an extension filter defined, continue if the file has a different extension String fileExt = getExtension(file.getName()); if (extensions != null && extensions.length > 0 && !ArrayUtils.contains(extensions, fileExt)) continue; currentFileNames.add(file.getName()); Long timeLastCheck = lastCheckedMap.get(file.getName()); if (timeLastCheck == null) timeLastCheck = 0L; if (FileUtils.isFileNewer(file, timeLastCheck)) { if (modelRepo != null) { try { if (modelRepo.addOrRefreshModel(file.getName(), FileUtils.openInputStream(file))) { lastCheckedMap.put(file.getName(), new Date().getTime()); } } catch (IOException e) { logger.warn("Cannot open file '" + file.getAbsolutePath() + "' for reading.", e); } } } } // check for files that have been deleted meanwhile if (lastFileNames.get(foldername) != null) { for (String fileName : lastFileNames.get(foldername)) { if (!currentFileNames.contains(fileName)) { logger.info("File '{}' has been deleted", fileName); if (modelRepo != null) { modelRepo.removeModel(fileName); lastCheckedMap.remove(fileName); } } } } lastFileNames.put(foldername, currentFileNames); }
From source file:org.openmrs.module.clinicalsummary.io.DownloadSummariesTask.java
private void processStream(ZipOutputStream zipOutputStream, String basePath, File currentFile, Date cutOffDate) throws Exception { byte data[] = new byte[TaskConstants.BUFFER_SIZE]; if (currentFile.isDirectory()) { FileFilter fileFilter = new WildcardFileFilter( StringUtils.join(Arrays.asList("*", Evaluator.FILE_TYPE_XML), ".")); File[] files = currentFile.listFiles(fileFilter); for (File file : files) { processStream(zipOutputStream, basePath, file, cutOffDate); }/* www . j a v a 2 s .c o m*/ } else { if (cutOffDate == null || FileUtils.isFileNewer(currentFile, cutOffDate)) { processedFilename = currentFile.getName(); // add the zip entry String zipEntryName = StringUtils.remove(currentFile.getAbsolutePath(), basePath); ZipEntry entry = new ZipEntry(zipEntryName); zipOutputStream.putNextEntry(entry); // write the entry int count; InputStream inStream = new BufferedInputStream(new FileInputStream(currentFile)); while ((count = inStream.read(data, 0, TaskConstants.BUFFER_SIZE)) != -1) { zipOutputStream.write(data, 0, count); } inStream.close(); } } }