List of usage examples for java.util.zip ZipInputStream ZipInputStream
public ZipInputStream(InputStream in)
From source file:com.thoughtworks.go.server.initializers.PluginsInitializerTest.java
@Test public void shouldUnzipPluginsAndRegisterZipUpdaterBeforeStartingPluginsFramework() throws IOException { ZipUtil zipUtil = mock(ZipUtil.class); pluginsInitializer = new PluginsInitializer(pluginManager, systemEnvironment, zipUtil, pluginExtensionsAndVersionValidator, elasticAgentInformationMigrator) { @Override/*from w ww . j a va 2 s. c om*/ public void startDaemon() { } @Override ZipInputStream getPluginsZipStream() { return new ZipInputStream(getClass().getResourceAsStream("/dummy-plugins.zip")); } }; pluginsInitializer.initialize(); InOrder inOrder = inOrder(zipUtil, pluginManager); inOrder.verify(zipUtil).unzip(any(ZipInputStream.class), any(File.class)); inOrder.verify(pluginManager, times(1)).startInfrastructure(true); }
From source file:com.twinsoft.convertigo.engine.util.ZipUtils.java
public static void expandZip(String zipFileName, String rootDir, String prefixDir) throws FileNotFoundException, IOException { Engine.logEngine.debug("Expanding the zip file " + zipFileName); // Creating the root directory File ftmp = new File(rootDir); if (!ftmp.exists()) { ftmp.mkdirs();/*from www .ja v a 2 s . c o m*/ Engine.logEngine.debug("Root directory created"); } ZipInputStream zis = new ZipInputStream(new BufferedInputStream(new FileInputStream(zipFileName))); try { ZipEntry entry; int prefixSize = prefixDir != null ? prefixDir.length() : 0; while ((entry = zis.getNextEntry()) != null) { // Ignoring directories if (entry.isDirectory()) { } else { String entryName = entry.getName(); Engine.logEngine.debug("+ Analyzing the entry: " + entryName); try { // Ignore entry if does not belong to the project directory if ((prefixDir == null) || entryName.startsWith(prefixDir)) { // Ignore entry from _data or _private directory if ((entryName.indexOf("/_data/") != prefixSize) && (entryName.indexOf("/_private/") != prefixSize)) { Engine.logEngine.debug(" The entry is accepted"); String s1 = rootDir + "/" + entryName; String dir = s1.substring(0, s1.lastIndexOf('/')); // Creating the directory if needed ftmp = new File(dir); if (!ftmp.exists()) { ftmp.mkdirs(); Engine.logEngine.debug(" Directory created"); } // Writing the files to the disk File file = new File(rootDir + "/" + entryName); FileOutputStream fos = new FileOutputStream(file); try { IOUtils.copy(zis, fos); } finally { fos.close(); } file.setLastModified(entry.getTime()); Engine.logEngine.debug(" File written to: " + rootDir + "/" + entryName); } } } catch (IOException e) { Engine.logEngine.error( "Unable to expand the ZIP entry \"" + entryName + "\": " + e.getMessage(), e); } } } } finally { zis.close(); } }
From source file:com.graphhopper.reader.OSMInputFile.java
@SuppressWarnings("unchecked") private InputStream decode(File file) throws IOException { final String name = file.getName(); InputStream ips = null;//from w w w. j a va 2 s. c o m try { ips = new BufferedInputStream(new FileInputStream(file), 50000); } catch (FileNotFoundException e) { throw new RuntimeException(e); } ips.mark(10); // check file header byte header[] = new byte[6]; ips.read(header); /* can parse bz2 directly with additional lib if (header[0] == 'B' && header[1] == 'Z') { return new CBZip2InputStream(ips); } */ if (header[0] == 31 && header[1] == -117) { ips.reset(); return new GZIPInputStream(ips, 50000); } else if (header[0] == 0 && header[1] == 0 && header[2] == 0 && header[4] == 10 && header[5] == 9 && (header[3] == 13 || header[3] == 14)) { ips.reset(); binary = true; return ips; } else if (header[0] == 'P' && header[1] == 'K') { ips.reset(); ZipInputStream zip = new ZipInputStream(ips); zip.getNextEntry(); return zip; } else if (name.endsWith(".osm") || name.endsWith(".xml")) { ips.reset(); return ips; } else if (name.endsWith(".bz2") || name.endsWith(".bzip2")) { String clName = "org.apache.commons.compress.compressors.bzip2.BZip2CompressorInputStream"; try { Class clazz = Class.forName(clName); ips.reset(); Constructor<InputStream> ctor = clazz.getConstructor(InputStream.class, boolean.class); return ctor.newInstance(ips, true); } catch (Exception e) { throw new IllegalArgumentException("Cannot instantiate " + clName, e); } } else { throw new IllegalArgumentException("Input file is not of valid type " + file.getPath()); } }
From source file:com.joliciel.lefff.LefffMemoryLoader.java
public LefffMemoryBase deserializeMemoryBase(File memoryBaseFile) { LOG.debug("deserializeMemoryBase"); boolean isZip = false; if (memoryBaseFile.getName().endsWith(".zip")) isZip = true;/* w w w .j a v a2s. c om*/ LefffMemoryBase memoryBase = null; ZipInputStream zis = null; FileInputStream fis = null; ObjectInputStream in = null; try { fis = new FileInputStream(memoryBaseFile); if (isZip) { zis = new ZipInputStream(fis); memoryBase = this.deserializeMemoryBase(zis); } else { in = new ObjectInputStream(fis); memoryBase = (LefffMemoryBase) in.readObject(); in.close(); } } catch (IOException ioe) { throw new RuntimeException(ioe); } catch (ClassNotFoundException cnfe) { throw new RuntimeException(cnfe); } return memoryBase; }
From source file:fll.web.FullTournamentTest.java
/** * Load the test data into the specified database. *//*w w w .j a va2 s .c o m*/ private static void loadTestData(final Connection testDataConn) throws SQLException, IOException { try (final InputStream dbResourceStream = FullTournamentTest.class .getResourceAsStream("data/99-final.flldb")) { Assert.assertNotNull("Missing test data", dbResourceStream); final ZipInputStream zipStream = new ZipInputStream(dbResourceStream); ImportDB.loadFromDumpIntoNewDB(zipStream, testDataConn); } }
From source file:utils.APIImporter.java
/** * function to unzip the imported folder * @param zipFile zip file path// ww w . j a v a2 s. co m * @param outputFolder folder to copy the zip content * @throws APIImportException */ private static void unzipFolder(String zipFile, String outputFolder) throws APIImportException { byte[] buffer = new byte[1024]; try { ZipInputStream zis = new ZipInputStream(new FileInputStream(zipFile)); //get the zipped file list entry ZipEntry ze = zis.getNextEntry(); FileOutputStream fos = null; while (ze != null) { String fileName = ze.getName(); File newFile = new File(outputFolder + File.separator + fileName); //create all non exists folders //else you will hit FileNotFoundException for compressed folder new File(newFile.getParent()).mkdirs(); fos = new FileOutputStream(newFile); int len; while ((len = zis.read(buffer)) > 0) { fos.write(buffer, 0, len); } fos.close(); ze = zis.getNextEntry(); } zis.closeEntry(); IOUtils.closeQuietly(zis); IOUtils.closeQuietly(fos); // ZipInputStream zis = new ZipInputStream(new FileInputStream(zipFile)); // //get the zipped file list entry // ZipEntry ze = zis.getNextEntry(); // FileOutputStream fos = null; // while(ze!=null){ // String fileName = ze.getName(); // File newFile = new File(outputFolder + File.separator + fileName); // //create all non exists folders // //else it hit FileNotFoundException for compressed folder // boolean directoryStatus = new File(newFile.getParent()).mkdirs(); // while (directoryStatus){ // fos = new FileOutputStream(newFile); // int len; // while ((len = zis.read(buffer)) > 0) { // fos.write(buffer, 0, len); // } // ze = zis.getNextEntry(); // } // } // zis.closeEntry(); // IOUtils.closeQuietly(fos); // IOUtils.closeQuietly(zis); } catch (IOException e) { String errorMsg = "Cannot extract the zip entries "; log.error(errorMsg, e); throw new APIImportException(errorMsg, e); } }
From source file:com.thoughtworks.go.server.web.FileViewTest.java
@Test public void testShouldZipFileIfZipIsRequired() throws Exception { Map<String, Object> model = new HashMap<>(); model.put("targetFile", file); model.put(FileView.NEED_TO_ZIP, true); view.render(model, mockRequest, mockResponse); // Unzip from the response and verify that the we can read the file back File unzipHere = temporaryFolder.newFolder(); new ZipUtil().unzip(new ZipInputStream(new ByteArrayInputStream(mockResponse.getContentAsByteArray())), unzipHere);/* w ww. j a v a2 s . c o m*/ assertEquals(FileUtils.readFileToString(new File(unzipHere, file.getName()), UTF_8), "hello"); }
From source file:com.formkiq.core.service.ArchiveServiceImpl.java
@Override public ArchiveDTO extractJSONFromZipFile(final byte[] bytes) { ArchiveDTO archive = new ArchiveDTO(); ByteArrayInputStream is = new ByteArrayInputStream(bytes); ZipInputStream zipStream = new ZipInputStream(is); try {/*from www. ja v a2 s . co m*/ ZipEntry entry = null; while ((entry = zipStream.getNextEntry()) != null) { String filename = entry.getName(); if (filename.endsWith(".form")) { String data = IOUtils.toString(zipStream, CHARSET_UTF8); archive.addForm(this.jsonService.readValue(data, FormJSON.class)); } else if (filename.endsWith(".workflow")) { String data = IOUtils.toString(zipStream, CHARSET_UTF8); archive.setWorkflow(this.jsonService.readValue(data, Workflow.class)); } else if (filename.endsWith(".pdf")) { byte[] data = IOUtils.toByteArray(zipStream); archive.addPDF(filename, data); } else if (filename.endsWith(".signature")) { String s = filename.replaceAll("\\.signature", ""); byte[] data = IOUtils.toByteArray(zipStream); archive.addSignature(s, data); } else if (filename.endsWith(".route")) { String data = IOUtils.toString(zipStream, CHARSET_UTF8); archive.addRoute(this.jsonService.readValue(data, WorkflowRoute.class)); } else { byte[] data = IOUtils.toByteArray(zipStream); archive.addObject(filename, data); } } archive.finish(); } catch (IOException e) { LOG.log(Level.WARNING, e.getMessage(), e); throw new InvalidRequestBodyException(); } finally { IOUtils.closeQuietly(is); IOUtils.closeQuietly(zipStream); } return archive; }
From source file:edu.wustl.xipHost.caGrid.RetrieveNBIASecuredTest.java
@Test public void test() throws Exception { System.setProperty("org.apache.commons.logging.Log", "org.apache.commons.logging.impl.NoOpLog"); Login login = new GridLogin(); String userName = "<JIRAusername>"; String password = "<JIRApassword>"; DcmFileFilter dcmFilter = new DcmFileFilter(); login.login(userName, password);//from w w w. j a v a 2 s .c om GlobusCredential globusCred = login.getGlobusCredential(); boolean isConnectionSecured = login.isConnectionSecured(); logger.debug("Acquired NBIA GlobusCredential. Connection secured = " + isConnectionSecured); if (!isConnectionSecured) { fail("Unable to acquire NBIA GlobusCredential. Check username and password."); return; } NCIACoreServiceClient client = new NCIACoreServiceClient(gridServiceUrl, globusCred); client.setAnonymousPrefered(false); TransferServiceContextReference tscr = client.retrieveDicomDataBySeriesUID("1.3.6.1.4.1.9328.50.1.4718"); TransferServiceContextClient tclient = new TransferServiceContextClient(tscr.getEndpointReference(), globusCred); InputStream istream = TransferClientHelper.getData(tclient.getDataTransferDescriptor(), globusCred); ZipInputStream zis = new ZipInputStream(istream); ZipEntryInputStream zeis = null; BufferedInputStream bis = null; File importDir = new File("./test-content/NBIA5"); if (!importDir.exists()) { importDir.mkdirs(); } else { File[] files = importDir.listFiles(dcmFilter); for (int j = 0; j < files.length; j++) { File file = files[j]; file.delete(); } } while (true) { try { zeis = new ZipEntryInputStream(zis); } catch (EOFException e) { break; } catch (IOException e) { logger.error(e, e); } String unzzipedFile = null; try { unzzipedFile = importDir.getCanonicalPath(); } catch (IOException e) { logger.error(e, e); } logger.debug(" filename: " + zeis.getName()); bis = new BufferedInputStream(zeis); byte[] data = new byte[8192]; int bytesRead = 0; String retrievedFilePath = unzzipedFile + File.separator + zeis.getName(); try { BufferedOutputStream bos = new BufferedOutputStream(new FileOutputStream(retrievedFilePath)); while ((bytesRead = (bis.read(data, 0, data.length))) != -1) { bos.write(data, 0, bytesRead); } bos.flush(); bos.close(); } catch (IOException e) { logger.error(e, e); } } try { zis.close(); tclient.destroy(); } catch (IOException e) { logger.error(e, e); } File[] retrievedFiles = importDir.listFiles(dcmFilter); int numbOfRetreivedFiles = retrievedFiles.length; assertEquals("Number of retrieved files should be 2 but is. " + numbOfRetreivedFiles, numbOfRetreivedFiles, 2); //Assert file names. They should be equal to items' SeriesInstanceUIDs Map<String, File> mapRetrievedFiles = new HashMap<String, File>(); for (int i = 0; i < numbOfRetreivedFiles; i++) { File file = retrievedFiles[i]; mapRetrievedFiles.put(file.getName(), file); } boolean retrievedFilesCorrect = false; if (mapRetrievedFiles.containsKey("1.3.6.1.4.1.9328.50.1.4716.dcm") && mapRetrievedFiles.containsKey("1.3.6.1.4.1.9328.50.1.4720.dcm")) { retrievedFilesCorrect = true; } assertTrue("Retrieved files are not as expected.", retrievedFilesCorrect); }
From source file:org.statmantis.mport.retro.event.RetrosheetEventReader.java
@Override protected EventInformation read(InputStream stream) throws IOException { ZipInputStream zis = new ZipInputStream(stream); try {/* w w w. java 2 s. c o m*/ EventInformation info = new EventInformation(); ZipEntry entry = zis.getNextEntry(); while (entry != null) { try { BufferedReader reader = new BufferedReader(new InputStreamReader(zis)); if (entry.getName().equals("TEAM" + year)) { readTeamFile(entry.getName(), reader, info); } else if (entry.getName().endsWith(".ROS")) { readRosterFile(entry.getName(), reader, info); } else if (entry.getName().endsWith(".EVA") || entry.getName().endsWith(".EVN") || entry.getName().endsWith(".eba") || entry.getName().endsWith(".ebn")) { readEventFile(entry.getName(), reader, info); } else { throw new RetrosheetRuntimeException("Unknown zip entry: " + entry); } } catch (Exception e) { throw new RetrosheetRuntimeException("Error reading zip entry " + entry.getName(), e); } entry = zis.getNextEntry(); } return info; } finally { try { zis.close(); } catch (Exception e) { //no-op } } }