Example usage for java.util Map put

List of usage examples for java.util Map put

Introduction

In this page you can find the example usage for java.util Map put.

Prototype

V put(K key, V value);

Source Link

Document

Associates the specified value with the specified key in this map (optional operation).

Usage

From source file:com.bright.json.PGS.java

public static void main(String[] args) throws FileNotFoundException {

    String fileBasename = null;/*from   w w w  . ja va 2  s  .  c  om*/

    JFileChooser chooser = new JFileChooser();
    try {
        FileNameExtensionFilter filter = new FileNameExtensionFilter("Excel Spreadsheets", "xls", "xlsx");
        chooser.setFileFilter(filter);
        chooser.setCurrentDirectory(new java.io.File(System.getProperty("user.home")));
        chooser.setDialogTitle("Select the Excel file");

        chooser.setFileSelectionMode(JFileChooser.FILES_ONLY);
        chooser.setAcceptAllFileFilterUsed(false);

        if (chooser.showOpenDialog(null) == JFileChooser.APPROVE_OPTION) {
            System.out.println("getCurrentDirectory(): " + chooser.getCurrentDirectory());
            System.out.println("getSelectedFile() : " + chooser.getSelectedFile());

            // String fileBasename =
            // chooser.getSelectedFile().toString().substring(chooser.getSelectedFile().toString().lastIndexOf(File.separator)+1,chooser.getSelectedFile().toString().lastIndexOf("."));
            fileBasename = chooser.getSelectedFile().toString()
                    .substring(chooser.getSelectedFile().toString().lastIndexOf(File.separator) + 1);
            System.out.println("Base name: " + fileBasename);

        } else {
            System.out.println("No Selection ");

        }
    } catch (Exception e) {

        System.out.println(e.toString());

    }
    String fileName = chooser.getSelectedFile().toString();
    InputStream inp = new FileInputStream(fileName);
    Workbook workbook = null;
    if (fileName.toLowerCase().endsWith("xlsx")) {
        try {
            workbook = new XSSFWorkbook(inp);
        } catch (IOException e) {
            // TODO Auto-generated catch block
            e.printStackTrace();
        }
    } else if (fileName.toLowerCase().endsWith("xls")) {
        try {
            workbook = new HSSFWorkbook(inp);
        } catch (IOException e) {
            // TODO Auto-generated catch block
            e.printStackTrace();
        }
    }

    Sheet nodeSheet = workbook.getSheet("Devices");
    Sheet interfaceSheet = workbook.getSheet("Interfaces");
    System.out.println("Read nodes sheet.");
    // Row nodeRow = nodeSheet.getRow(1);
    // System.out.println(row.getCell(0).toString());
    // System.exit(0);

    JTextField uiHost = new JTextField("demo.brightcomputing.com");
    // TextPrompt puiHost = new
    // TextPrompt("demo.brightcomputing.com",uiHost);
    JTextField uiUser = new JTextField("root");
    // TextPrompt puiUser = new TextPrompt("root", uiUser);
    JTextField uiPass = new JPasswordField("");
    // TextPrompt puiPass = new TextPrompt("x5deix5dei", uiPass);

    JPanel myPanel = new JPanel(new GridLayout(5, 1));
    myPanel.add(new JLabel("Bright HeadNode hostname:"));
    myPanel.add(uiHost);
    // myPanel.add(Box.createHorizontalStrut(1)); // a spacer
    myPanel.add(new JLabel("Username:"));
    myPanel.add(uiUser);
    myPanel.add(new JLabel("Password:"));
    myPanel.add(uiPass);

    int result = JOptionPane.showConfirmDialog(null, myPanel, "Please fill in all the fields.",
            JOptionPane.OK_CANCEL_OPTION);
    if (result == JOptionPane.OK_OPTION) {
        System.out.println("Input received.");

    }

    String rhost = uiHost.getText();
    String ruser = uiUser.getText();
    String rpass = uiPass.getText();

    String cmURL = "https://" + rhost + ":8081/json";
    List<Cookie> cookies = doLogin(ruser, rpass, cmURL);
    chkVersion(cmURL, cookies);

    Map<String, Long> categories = UniqueKeyMap(cmURL, "cmdevice", "getCategories", cookies);
    Map<String, Long> networks = UniqueKeyMap(cmURL, "cmnet", "getNetworks", cookies);
    Map<String, Long> partitions = UniqueKeyMap(cmURL, "cmpart", "getPartitions", cookies);
    Map<String, Long> racks = UniqueKeyMap(cmURL, "cmpart", "getRacks", cookies);
    Map<String, Long> switches = UniqueKeyMap(cmURL, "cmdevice", "getEthernetSwitches", cookies);
    // System.out.println(switches.get("switch01"));
    // System.out.println("Size of the map: "+ switches.size());
    // System.exit(0);
    cmDevice newnode = new cmDevice();
    cmDevice.deviceObject devObj = new cmDevice.deviceObject();
    cmDevice.switchObject switchObj = new cmDevice.switchObject();
    // cmDevice.netObject netObj = new cmDevice.netObject();

    List<String> emptyslist = new ArrayList<String>();

    // Row nodeRow = nodeSheet.getRow(1);
    // Row ifRow = interfaceSheet.getRow(1);
    // System.out.println(nodeRow.getCell(0).toString());
    // nodeRow.getCell(3).getStringCellValue()
    Map<String, ArrayList<cmDevice.netObject>> ifmap = new HashMap<String, ArrayList<cmDevice.netObject>>();
    // Map<String,netObject> helperMap = new HashMap<String,netObject>();
    // Iterator<Row> rows = interfaceSheet.rowIterator ();
    // while (rows. < interfaceSheet.getPhysicalNumberOfRows()) {

    // List<netObject> netList = new ArrayList<netObject>();
    for (int i = 0; i < interfaceSheet.getPhysicalNumberOfRows(); i++) {
        Row ifRow = interfaceSheet.getRow(i);
        if (ifRow.getRowNum() == 0) {
            continue; // just skip the rows if row number is 0
        }

        System.out.println("Row nr: " + ifRow.getRowNum());
        cmDevice.netObject netObj = new cmDevice.netObject();
        ArrayList<cmDevice.netObject> helperList = new ArrayList<cmDevice.netObject>();
        netObj.setBaseType("NetworkInterface");
        netObj.setCardType(ifRow.getCell(3).getStringCellValue());
        netObj.setChildType(ifRow.getCell(4).getStringCellValue());
        netObj.setDhcp((ifRow.getCell(5).getNumericCellValue() > 0.1) ? true : false);
        netObj.setIp(ifRow.getCell(7).getStringCellValue());
        // netObj.setMac(ifRow.getCell(0).toString());
        //netObj.setModified(true);
        netObj.setName(ifRow.getCell(1).getStringCellValue());
        netObj.setNetwork(networks.get(ifRow.getCell(6).getStringCellValue()));
        //netObj.setOldLocalUniqueKey(0L);
        netObj.setRevision("");
        netObj.setSpeed(ifRow.getCell(8, Row.CREATE_NULL_AS_BLANK).getStringCellValue());
        netObj.setStartIf("ALWAYS");
        netObj.setToBeRemoved(false);
        netObj.setUniqueKey((long) ifRow.getCell(2).getNumericCellValue());
        //netObj.setAdditionalHostnames(new ArrayList<String>(Arrays.asList(ifRow.getCell(9, Row.CREATE_NULL_AS_BLANK).getStringCellValue().split("\\s*,\\s*"))));
        //netObj.setMac(ifRow.getCell(10, Row.CREATE_NULL_AS_BLANK).getStringCellValue());
        netObj.setMode((int) ifRow.getCell(11, Row.CREATE_NULL_AS_BLANK).getNumericCellValue());
        netObj.setOptions(ifRow.getCell(12, Row.CREATE_NULL_AS_BLANK).getStringCellValue());
        netObj.setMembers(new ArrayList<String>(Arrays
                .asList(ifRow.getCell(13, Row.CREATE_NULL_AS_BLANK).getStringCellValue().split("\\s*,\\s*"))));
        // ifmap.put(ifRow.getCell(0).getStringCellValue(), new
        // HashMap<String, cmDevice.netObject>());
        // helperMap.put(ifRow.getCell(1).getStringCellValue(), netObj) ;
        // ifmap.get(ifRow.getCell(0).getStringCellValue()).putIfAbsent(ifRow.getCell(1).getStringCellValue(),
        // netObj);
        // ifmap.put(ifRow.getCell(0).getStringCellValue(), helperMap);

        if (!ifmap.containsKey(ifRow.getCell(0).getStringCellValue())) {
            ifmap.put(ifRow.getCell(0).getStringCellValue(), new ArrayList<cmDevice.netObject>());
        }
        helperList = ifmap.get(ifRow.getCell(0).getStringCellValue());
        helperList.add(netObj);
        ifmap.put(ifRow.getCell(0).getStringCellValue(), helperList);

        continue;
    }

    for (int i = 0; i < nodeSheet.getPhysicalNumberOfRows(); i++) {
        Row nodeRow = nodeSheet.getRow(i);
        if (nodeRow.getRowNum() == 0) {
            continue; // just skip the rows if row number is 0
        }

        newnode.setService("cmdevice");
        newnode.setCall("addDevice");

        Map<String, Long> ifmap2 = new HashMap<String, Long>();
        for (cmDevice.netObject j : ifmap.get(nodeRow.getCell(0).getStringCellValue()))
            ifmap2.put(j.getName(), j.getUniqueKey());

        switchObj.setEthernetSwitch(switches.get(nodeRow.getCell(8).getStringCellValue()));
        System.out.println(nodeRow.getCell(8).getStringCellValue());
        System.out.println(switches.get(nodeRow.getCell(8).getStringCellValue()));
        switchObj.setPrt((int) nodeRow.getCell(9).getNumericCellValue());
        switchObj.setBaseType("SwitchPort");

        devObj.setBaseType("Device");
        // devObj.setCreationTime(0L);
        devObj.setCustomPingScript("");
        devObj.setCustomPingScriptArgument("");
        devObj.setCustomPowerScript("");
        devObj.setCustomPowerScriptArgument("");
        devObj.setCustomRemoteConsoleScript("");
        devObj.setCustomRemoteConsoleScriptArgument("");
        devObj.setDisksetup("");
        devObj.setBmcPowerResetDelay(0L);
        devObj.setBurning(false);
        devObj.setEthernetSwitch(switchObj);
        devObj.setExcludeListFull("");
        devObj.setExcludeListGrab("");
        devObj.setExcludeListGrabnew("");
        devObj.setExcludeListManipulateScript("");
        devObj.setExcludeListSync("");
        devObj.setExcludeListUpdate("");
        devObj.setFinalize("");
        devObj.setRack(racks.get(nodeRow.getCell(10).getStringCellValue()));
        devObj.setRackHeight((long) nodeRow.getCell(11).getNumericCellValue());
        devObj.setRackPosition((long) nodeRow.getCell(12).getNumericCellValue());
        devObj.setIndexInsideContainer(0L);
        devObj.setInitialize("");
        devObj.setInstallBootRecord(false);
        devObj.setInstallMode("");
        devObj.setIoScheduler("");
        devObj.setLastProvisioningNode(0L);
        devObj.setMac(nodeRow.getCell(6).getStringCellValue());

        devObj.setModified(true);
        devObj.setCategory(categories.get(nodeRow.getCell(1).getStringCellValue()));
        devObj.setChildType("PhysicalNode");
        //devObj.setDatanode((nodeRow.getCell(5).getNumericCellValue() > 0.1) ? true
        //      : false);
        devObj.setHostname(nodeRow.getCell(0).getStringCellValue());
        devObj.setModified(true);
        devObj.setPartition(partitions.get(nodeRow.getCell(2).getStringCellValue()));
        devObj.setUseExclusivelyFor("Category");

        devObj.setNextBootInstallMode("");
        devObj.setNotes("");
        devObj.setOldLocalUniqueKey(0L);

        devObj.setPowerControl(nodeRow.getCell(7).getStringCellValue());

        // System.out.println(ifmap.get("excelnode001").size());
        // System.out.println(ifmap.get(nodeRow.getCell(0).getStringCellValue()).get(nodeRow.getCell(3).getStringCellValue()).getUniqueKey());

        devObj.setManagementNetwork(networks.get(nodeRow.getCell(3).getStringCellValue()));

        devObj.setProvisioningNetwork(ifmap2.get(nodeRow.getCell(4).getStringCellValue()));
        devObj.setProvisioningTransport("RSYNCDAEMON");
        devObj.setPxelabel("");
        // "rack": 90194313218,
        // "rackHeight": 1,
        // "rackPosition": 4,
        devObj.setRaidconf("");
        devObj.setRevision("");

        devObj.setSoftwareImageProxy(null);
        devObj.setStartNewBurn(false);

        devObj.setTag("00000000a000");
        devObj.setToBeRemoved(false);
        // devObj.setUcsInfoConfigured(null);
        // devObj.setUniqueKey(12345L);

        devObj.setUserdefined1("");
        devObj.setUserdefined2("");

        ArrayList<Object> mylist = new ArrayList<Object>();

        ArrayList<cmDevice.netObject> mylist2 = new ArrayList<cmDevice.netObject>();
        ArrayList<Object> emptylist = new ArrayList<Object>();

        devObj.setFsexports(emptylist);
        devObj.setFsmounts(emptylist);
        devObj.setGpuSettings(emptylist);
        devObj.setFspartAssociations(emptylist);

        devObj.setPowerDistributionUnits(emptyslist);

        devObj.setRoles(emptylist);
        devObj.setServices(emptylist);
        devObj.setStaticRoutes(emptylist);

        mylist2 = ifmap.get(nodeRow.getCell(0).getStringCellValue());

        devObj.setNetworks(mylist2);
        mylist.add(devObj);
        mylist.add(1);
        newnode.setArgs(mylist);

        GsonBuilder builder = new GsonBuilder();
        builder.enableComplexMapKeySerialization();

        // Gson g = new Gson();
        Gson g = builder.create();

        String json2 = g.toJson(newnode);

        // To be used from a real console and not Eclipse

        String message = JSonRequestor.doRequest(json2, cmURL, cookies);
        continue;
    }

    JOptionPane optionPaneF = new JOptionPane("The nodes have been added!");
    JDialog myDialogF = optionPaneF.createDialog(null, "Complete:  ");
    myDialogF.setModal(false);
    myDialogF.setVisible(true);
    doLogout(cmURL, cookies);
    // System.exit(0);
}

From source file:de.citec.sc.matoll.process.Matoll_CreateMax.java

public static void main(String[] args) throws IOException, ParserConfigurationException, SAXException,
        InstantiationException, IllegalAccessException, ClassNotFoundException, Exception {

    String directory;/*from   w  w w.j a  v a  2s.  c o m*/
    String gold_standard_lexicon;
    String output_lexicon;
    String configFile;
    Language language;
    String output;

    Stopwords stopwords = new Stopwords();

    HashMap<String, Double> maxima;
    maxima = new HashMap<String, Double>();

    if (args.length < 3) {
        System.out.print("Usage: Matoll --mode=train/test <DIRECTORY> <CONFIG>\n");
        return;

    }

    //      Classifier classifier;

    directory = args[1];
    configFile = args[2];

    final Config config = new Config();

    config.loadFromFile(configFile);

    gold_standard_lexicon = config.getGoldStandardLexicon();

    String model_file = config.getModel();

    output_lexicon = config.getOutputLexicon();
    output = config.getOutput();

    language = config.getLanguage();

    LexiconLoader loader = new LexiconLoader();
    Lexicon gold = loader.loadFromFile(gold_standard_lexicon);

    Set<String> uris = new HashSet<>();
    //        Map<Integer,String> sentence_list = new HashMap<>();
    Map<Integer, Set<Integer>> mapping_words_sentences = new HashMap<>();

    //consider only properties
    for (LexicalEntry entry : gold.getEntries()) {
        try {
            for (Sense sense : entry.getSenseBehaviours().keySet()) {
                String tmp_uri = sense.getReference().getURI().replace("http://dbpedia.org/ontology/", "");
                if (!Character.isUpperCase(tmp_uri.charAt(0))) {
                    uris.add(sense.getReference().getURI());
                }
            }
        } catch (Exception e) {
        }
        ;
    }

    ModelPreprocessor preprocessor = new ModelPreprocessor(language);
    preprocessor.setCoreferenceResolution(false);
    Set<String> dep = new HashSet<>();
    dep.add("prep");
    dep.add("appos");
    dep.add("nn");
    dep.add("dobj");
    dep.add("pobj");
    dep.add("num");
    preprocessor.setDEP(dep);

    List<File> list_files = new ArrayList<>();

    if (config.getFiles().isEmpty()) {
        File folder = new File(directory);
        File[] files = folder.listFiles();
        for (File file : files) {
            if (file.toString().contains(".ttl"))
                list_files.add(file);
        }
    } else {
        list_files.addAll(config.getFiles());
    }
    System.out.println(list_files.size());

    int sentence_counter = 0;
    Map<String, Set<Integer>> bag_words_uri = new HashMap<>();
    Map<String, Integer> mapping_word_id = new HashMap<>();
    for (File file : list_files) {
        Model model = RDFDataMgr.loadModel(file.toString());
        for (Model sentence : getSentences(model)) {
            String reference = getReference(sentence);
            reference = reference.replace("http://dbpedia/", "http://dbpedia.org/");
            if (uris.contains(reference)) {
                sentence_counter += 1;
                Set<Integer> words_ids = getBagOfWords(sentence, stopwords, mapping_word_id);
                //TODO: add sentence preprocessing
                String obj = getObject(sentence);
                String subj = getSubject(sentence);
                preprocessor.preprocess(sentence, subj, obj, language);
                //TODO: also return marker if object or subject of property (in SPARQL this has to be optional of course)
                String parsed_sentence = getParsedSentence(sentence);
                try (FileWriter fw = new FileWriter("mapping_sentences_to_ids_goldstandard.tsv", true);
                        BufferedWriter bw = new BufferedWriter(fw);
                        PrintWriter out = new PrintWriter(bw)) {
                    out.println(sentence_counter + "\t" + parsed_sentence);
                } catch (IOException e) {
                    e.printStackTrace();
                }
                for (Integer word_id : words_ids) {
                    if (mapping_words_sentences.containsKey(word_id)) {
                        Set<Integer> tmp_set = mapping_words_sentences.get(word_id);
                        tmp_set.add(sentence_counter);
                        mapping_words_sentences.put(word_id, tmp_set);

                    } else {
                        Set<Integer> tmp_set = new HashSet<>();
                        tmp_set.add(sentence_counter);
                        mapping_words_sentences.put(word_id, tmp_set);
                    }

                }
                if (bag_words_uri.containsKey(reference)) {
                    Set<Integer> tmp = bag_words_uri.get(reference);
                    for (Integer w : words_ids) {
                        tmp.add(w);

                    }
                    bag_words_uri.put(reference, tmp);
                } else {
                    Set<Integer> tmp = new HashSet<>();
                    for (Integer w : words_ids) {
                        tmp.add(w);
                    }
                    bag_words_uri.put(reference, tmp);
                }
            }

        }
        model.close();

    }

    PrintWriter writer = new PrintWriter("bag_of_words_only_goldstandard.tsv");
    StringBuilder string_builder = new StringBuilder();
    for (String r : bag_words_uri.keySet()) {
        string_builder.append(r);
        for (Integer i : bag_words_uri.get(r)) {
            string_builder.append("\t");
            string_builder.append(i);
        }
        string_builder.append("\n");
    }
    writer.write(string_builder.toString());
    writer.close();

    writer = new PrintWriter("mapping_words_to_sentenceids_goldstandard.tsv");
    string_builder = new StringBuilder();
    for (Integer w : mapping_words_sentences.keySet()) {
        string_builder.append(w);
        for (int i : mapping_words_sentences.get(w)) {
            string_builder.append("\t");
            string_builder.append(i);
        }
        string_builder.append("\n");
    }
    writer.write(string_builder.toString());
    writer.close();

}

From source file:com.oneapm.base.SparkAggregation.java

public static void main(String[] args) throws IOException {

    String configfile = "alert.cnf";

    final FlowConstant flowConstant = new FlowConstant();

    Properties config = null;/*from  w  w w .j  a v a2 s  .  c om*/

    try {
        config = getConfig(configfile);

    } catch (IOException e) {
        LOG.error(configfile + " doesnt exist in /etc/analysis/... exit" + e);
        System.exit(-1);
    }

    final int window = Integer.parseInt(config.getProperty("time.window", "60"));

    final List<String> percent = Arrays.asList("tryConnectPer", "cBitpacketAccount", "abortConntionCount",
            "unidirectionalTrafficPer");

    final List<String> jsonList = new ArrayList<>();

    final Map<String, Tuple2<String, Integer>> stats = new HashMap<String, Tuple2<String, Integer>>();

    final Map<ClientKey, BaseData> broadClient = new HashMap<ClientKey, BaseData>();

    final Map<HostKey, BaseData> broadHost = new HashMap<HostKey, BaseData>();

    final Map<ServiceKey, BaseData> broadService = new HashMap<ServiceKey, BaseData>();

    final Map<SubnetKey, BaseData> broadSubnet = new HashMap<SubnetKey, BaseData>();

    final Map<VlanKey, BaseData> broadVlan = new HashMap<VlanKey, BaseData>();

    final String URL = config.getProperty("alert.url");

    final String HEART_BEAT = config.getProperty("alert.heartbeat");

    final String RECOVER = config.getProperty("alert.recover");

    ZookeeperConfigWatcher.startZookeeperWatcherService(getConfig("alert.cnf").getProperty("kafaka.zoo"),
            "/ni/site", new SiteConvertImpl(flowConstant));
    ZookeeperConfigWatcher.startZookeeperWatcherService(getConfig("alert.cnf").getProperty("kafaka.zoo"),
            "/ni/net", new NetConvertImpl(flowConstant));
    ZookeeperConfigWatcher.startZookeeperWatcherService(getConfig("alert.cnf").getProperty("kafaka.zoo"),
            "/ni/vlan_sflow", new LinkConvertImpl(flowConstant));
    ZookeeperConfigWatcher.startZookeeperWatcherService(getConfig("alert.cnf").getProperty("kafaka.zoo"),
            "/ni/subnet", new SubnetConvertImpl(flowConstant));

    zookeeperClient.connectZookeeper(config.getProperty("kafaka.zoo"));

    esGet.setNodeClient();

    startZookeeperService(flowConstant, zookeeperClient);

    zookeeperClient.setRules("/ni/caution");

    JavaPairReceiverInputDStream<String, byte[]> rawStream = setupRawStreamFromKafka(config,
            config.getProperty("group.id", "oneapm-alert"));

    LOG.info("alert config:" + config.toString());

    final Broadcast<IPDataInfo> ipDataBroadcastInfo = getJsc().sparkContext().broadcast(new IPDataInfo());

    final Broadcast<ProtocalTypeInfo> protocalTypeBroadcastInfo = getJsc().sparkContext()
            .broadcast(new ProtocalTypeInfo());

    JavaPairDStream<TimeAgg, BeforeAgg> aggJavaPairDStream = rawStream
            .mapToPair(new PairFunction<Tuple2<String, byte[]>, TimeAgg, BeforeAgg>() {
                private static final long serialVersionUID = -2751318332921803477L;

                @Override
                public Tuple2<TimeAgg, BeforeAgg> call(Tuple2<String, byte[]> stringTuple2) throws Exception {
                    String[] s = TAB.split(new String(stringTuple2._2));
                    String clientIP = s[1];
                    String serverIP = s[2];
                    TimeAgg timeAgg = new TimeAgg();
                    BeforeAgg beforeAgg = new BeforeAgg();
                    timeAgg.setServer_ip(serverIP);
                    if (s.length >= 60) {
                        //setProtocal_type
                        if (!"-".equals(s[11]) && !"".equals(s[11])) {
                            timeAgg.setProtocal_type(s[11]);
                        } else {
                            if ("TCP".equals(s[12])) {
                                ProtocalTypeInfo protocalTypeInfo = protocalTypeBroadcastInfo.value();
                                String protocalType = protocalTypeInfo.config.getProperty(s[4]);

                                if (protocalType != null) {
                                    timeAgg.setProtocal_type(protocalType);
                                } else {
                                    timeAgg.setProtocal_type("TCP_" + s[4]);
                                }
                            } else {
                                timeAgg.setProtocal_type(s[12]);
                            }
                        }

                        timeAgg.setType("tcp");

                        //setVlan_id
                        String vlanLinkAlias = flowConstant.VLAN_LINK.get(s[13]);
                        String portLinkAlias = flowConstant.PROBE_POTR_MAP.get(s[0] + "_" + s[15]);
                        if (flowConstant.PROBE_HOST_ENABLE) {
                            if (portLinkAlias != null) {
                                timeAgg.setVlan_id(portLinkAlias);
                            } else {
                                timeAgg.setVlan_id(s[0] + "-nic" + s[15]);
                            }
                        } else if (flowConstant.VLAN_LINK_ENABLE) {
                            if (vlanLinkAlias != null) {
                                timeAgg.setVlan_id(vlanLinkAlias);
                            } else {
                                timeAgg.setVlan_id(s[13]);
                            }
                        } else {
                            timeAgg.setVlan_id("Vlan" + s[13]);
                        }

                        if (!"-".equals(s[6])) {
                            timeAgg.setTimestamp(format.format((long) Double.parseDouble(s[6]) * 1000));
                        } else {
                            timeAgg.setTimestamp(s[6]);
                        }

                        if (!"-".equals(s[7])) {
                            timeAgg.setTimeEnd(format.format((long) Double.parseDouble(s[7]) * 1000));
                        } else {
                            timeAgg.setTimeEnd(s[7]);
                        }

                        beforeAgg.setPacket_size(Double.parseDouble(s[55]) + Double.parseDouble(s[56]));

                        beforeAgg.setC_packet_size(Double.parseDouble(s[55]));

                        beforeAgg.setS_packet_size(Double.parseDouble(s[56]));

                        beforeAgg.setPacket_count(Double.parseDouble(s[59]) + Double.parseDouble(s[60]));

                        beforeAgg.setLosspacket_count(Double.parseDouble(s[33]) + Double.parseDouble(s[39])
                                + Double.parseDouble(s[35]) + Double.parseDouble(s[41]));

                        double cRto = (Double.valueOf(s[19]) + Double.valueOf(s[21]) + Double.valueOf(s[23]))
                                * 1000;
                        double sRto = (Double.valueOf(s[20]) + Double.valueOf(s[22]) + Double.valueOf(s[24]))
                                * 1000;

                        beforeAgg.setTotal_rto(cRto + sRto);

                        //   ?/TCP????/TCP????/TCP?MTU?MTU/TCP?

                        beforeAgg.setInt_ZWIN_COUNT(Double.parseDouble(s[43]));
                        beforeAgg.setInt_OOR_COUNT(Double.parseDouble(s[46]));
                        beforeAgg.setInt_CONGEST_COUNT(Double.parseDouble(s[47]));
                        beforeAgg.setMTU(Double.parseDouble(s[61]) + Double.parseDouble(s[62]));

                        Boolean hasSynFlag = Boolean.valueOf(s[5]);
                        timeAgg.setHasSyn(hasSynFlag);
                        timeAgg.setBool_FIN(Boolean.valueOf(s[25]));
                        timeAgg.setBool_RST(Boolean.valueOf(s[26]));
                        if (hasSynFlag && "-".equals(s[9])) {
                            beforeAgg.setAbort(1);
                        } else {
                            beforeAgg.setAbort(0);
                        }

                        beforeAgg.setTcpTurns(Integer.parseInt(s[30])); //int_TURN_COUNT
                        beforeAgg.setConnrequest_count(Double.parseDouble(s[48]));
                        beforeAgg.setsAbortConnCount(Integer.valueOf(s[50]));

                        Long cPayLoad = Long.valueOf(s[53]);
                        Long sPayLoad = Long.valueOf(s[54]);
                        long payLoad = cPayLoad + sPayLoad;

                        double sessionJlRtt = 0;

                        if (!"-".equals(s[9])) {
                            sessionJlRtt = Double.valueOf(s[9]) * 1000;
                            beforeAgg.setRtt(sessionJlRtt);
                            beforeAgg.setServerJlRttCount(1);
                            beforeAgg.setClientJlRttCount(1);
                        }

                        if (hasSynFlag && !"-".equals(s[9])) {
                            beforeAgg.setCount(1);
                            if ("true".equals(s[26]) && payLoad == 0) {
                                beforeAgg.setCount(0);
                            }
                        }

                        if (!"-".equals(s[10])) {
                            double clientJlRtt = Double.valueOf(s[10]) * 1000;
                            double serverJlRtt = sessionJlRtt - clientJlRtt;

                            if (clientJlRtt < sessionJlRtt) {
                                beforeAgg.setServer_rtt(clientJlRtt);
                                beforeAgg.setClient_rtt(serverJlRtt);
                            } else {
                                beforeAgg.setServer_rtt(sessionJlRtt / 2);
                                beforeAgg.setClient_rtt(sessionJlRtt / 2);
                            }
                        }

                        if (beforeAgg.tcpTurns > 0) {
                            beforeAgg.setSessionCount(1);
                            if (Double.parseDouble(s[18]) > 0) {
                                beforeAgg.setServer_reponsetime(
                                        Double.parseDouble(s[18]) / beforeAgg.tcpTurns * 1000);
                            }
                            if (Double.parseDouble(s[16]) > 0) {
                                beforeAgg.setResponseTransmissionTime(
                                        Double.parseDouble(s[16]) / beforeAgg.tcpTurns * 1000);
                            }
                            if (Double.parseDouble(s[17]) > 0) {
                                beforeAgg.setRequestTransmissionTime(
                                        Double.parseDouble(s[17]) / beforeAgg.tcpTurns * 1000);
                            }
                            if (beforeAgg.total_rto > 0) {
                                beforeAgg.setTotal_rto(beforeAgg.getTotal_rto() / beforeAgg.tcpTurns);
                            }

                            beforeAgg.setUserResponseTime(
                                    beforeAgg.getRtt() + beforeAgg.getRequestTransmissionTime()
                                            + beforeAgg.getResponseTransmissionTime()
                                            + beforeAgg.getServer_reponsetime() + beforeAgg.total_rto);

                        } else {
                            beforeAgg.setServer_reponsetime(0);
                            beforeAgg.setResponseTransmissionTime(0);
                            beforeAgg.setRequestTransmissionTime(0);
                            beforeAgg.setTotal_rto(0);
                            beforeAgg.setUserResponseTime(0);
                        }

                        beforeAgg.setC_bitpacket_account(Double.parseDouble(s[57]) + Double.parseDouble(s[58]));

                    } else if (s.length <= 28) {
                        if (!"-".equals(s[8]) && !"".equals(s[8])) {
                            timeAgg.setProtocal_type(s[8]);
                        } else {
                            if ("UDP".equals(s[9])) {
                                ProtocalTypeInfo protocalTypeInfo = protocalTypeBroadcastInfo.value();
                                String protocalType = protocalTypeInfo.config.getProperty(s[4]);

                                if (protocalType != null) {
                                    timeAgg.setProtocal_type(protocalType);
                                } else {
                                    timeAgg.setProtocal_type("UDP");
                                }
                            } else {
                                timeAgg.setProtocal_type(s[9]);
                            }
                        }

                        beforeAgg.setCount(0);
                        timeAgg.setType("udp");

                        timeAgg.setHasSyn(false);
                        timeAgg.setBool_FIN(false);
                        timeAgg.setBool_RST(false);

                        //setVlan_id
                        String vlanLinkAlias = flowConstant.VLAN_LINK.get(s[12]);
                        String portLinkAlias = flowConstant.PROBE_POTR_MAP.get(s[0] + "_" + s[10]);
                        if (flowConstant.PROBE_HOST_ENABLE) {
                            if (portLinkAlias != null) {
                                timeAgg.setVlan_id(portLinkAlias);
                            } else {
                                timeAgg.setVlan_id(s[0] + "-nic" + s[10]);
                            }
                        } else if (flowConstant.VLAN_LINK_ENABLE) {
                            if (vlanLinkAlias != null) {
                                timeAgg.setVlan_id(vlanLinkAlias);
                            } else {
                                timeAgg.setVlan_id(s[12]);
                            }
                        } else {
                            timeAgg.setVlan_id("Vlan" + s[12]);
                        }

                        if (!"-".equals(s[5])) {
                            timeAgg.setTimestamp(format.format((long) Double.parseDouble(s[5]) * 1000));
                        } else {
                            timeAgg.setTimestamp(s[5]);
                        }

                        if (!"-".equals(s[6])) {
                            timeAgg.setTimeEnd(format.format((long) Double.parseDouble(s[6]) * 1000));
                        } else {
                            timeAgg.setTimeEnd(s[6]);
                        }

                        beforeAgg.setPacket_size(Double.parseDouble(s[20]) + Double.parseDouble(s[21]));
                        beforeAgg.setPacket_count(Double.parseDouble(s[24]) + Double.parseDouble(s[25]));

                        beforeAgg.setC_packet_size(Double.parseDouble(s[20]));
                        beforeAgg.setS_packet_size(Double.parseDouble(s[21]));

                        beforeAgg.setInt_ZWIN_COUNT(0);
                        beforeAgg.setInt_OOR_COUNT(0);
                        beforeAgg.setInt_CONGEST_COUNT(0);
                        beforeAgg.setMTU(0);

                        beforeAgg.setC_bitpacket_account(Double.parseDouble(s[22]) + Double.parseDouble(s[23]));
                        beforeAgg.setAbort(0);
                        beforeAgg.setClient_rtt(0);
                        beforeAgg.setServer_rtt(0);
                        beforeAgg.setRtt(0);
                        beforeAgg.setServerJlRttCount(0);
                        beforeAgg.setClientJlRttCount(0);
                        beforeAgg.setLosspacket_count(0);
                        beforeAgg.setServer_reponsetime(0);
                        beforeAgg.setTcpTurns(0);
                        beforeAgg.setConnrequest_count(0);
                        beforeAgg.setTotal_rto(0);
                        beforeAgg.setUserResponseTime(0);
                        beforeAgg.setResponseTransmissionTime(0);
                        beforeAgg.setRequestTransmissionTime(0);
                        beforeAgg.setServer_reponsetime(0);
                        beforeAgg.setsAbortConnCount(0);
                        beforeAgg.setSessionCount(0);
                    }

                    String sInOutFlag = IPUtils.isInHomeNet(serverIP, flowConstant.HOMENET);
                    String cInOutFlag = IPUtils.isInHomeNet(clientIP, flowConstant.HOMENET);
                    //setSubnet
                    if ("IN".equals(sInOutFlag)) {
                        String sSubNet = IPUtils.getSubNet(serverIP, flowConstant.NETMASK);
                        timeAgg.setSubnet(sSubNet + "/" + flowConstant.MASKBITS);
                    } else {
                        timeAgg.setSubnet("-");
                    }

                    if ("255.255.255.255".equals(clientIP)) {
                        timeAgg.setClient_site("-");
                    } else {
                        String clientSiteInfo = IPUtils.getSiteInfo(clientIP, flowConstant.SITEINFO_MAP);
                        IPDataInfo ipDataInfo = ipDataBroadcastInfo.getValue();
                        if (clientSiteInfo != null) {
                            String[] clientSiteInfos = clientSiteInfo.split("_", 3);
                            timeAgg.setClient_site(clientSiteInfos[2]);
                        } else {
                            if ("IN".equals(cInOutFlag)) {
                                timeAgg.setClient_site("");
                            } else {
                                if (ipDataInfo != null) {
                                    String[] ipinfo = ipDataInfo.find(clientIP);

                                    //
                                    if (ipinfo.length < 3) {
                                        timeAgg.setClient_site("");
                                    } else {
                                        if ("".equals(ipinfo[0])) {
                                            timeAgg.setClient_site("");
                                        } else {
                                            //,areasite
                                            if ("".equals(ipinfo[1])) {
                                                ipinfo[1] = ipinfo[0];
                                            }
                                            if ("".equals(ipinfo[2])) {
                                                ipinfo[2] = ipinfo[1];
                                            }
                                            timeAgg.setClient_site(ipinfo[2]);
                                        }
                                    }
                                } else {
                                    timeAgg.setClient_site("?");
                                }
                            }
                        }
                    }

                    return new Tuple2<>(timeAgg, beforeAgg);

                }
            }).filter(new Function<Tuple2<TimeAgg, BeforeAgg>, Boolean>() {
                @Override
                public Boolean call(Tuple2<TimeAgg, BeforeAgg> v1) throws Exception {
                    return !v1._1.getTimestamp().equals("-") && !v1._1.getTimestamp().equals("");
                }
            });

    //        aggJavaPairDStream.foreachRDD(new Function<JavaPairRDD<TimeAgg, BeforeAgg>, Void>() {
    //            @Override
    //            public Void call(JavaPairRDD<TimeAgg, BeforeAgg> v1) throws Exception {
    //                if (Boolean.parseBoolean(getConfig("alert.cnf").getProperty("save.es")) && v1 != null) {
    //                    JavaRDD<Map<String, ?>> es = v1.map(new Function<Tuple2<TimeAgg, BeforeAgg>, Map<String,
    //                            ?>>() {
    //
    //                        @Override
    //                        public Map<String, ?> call(Tuple2<TimeAgg, BeforeAgg> v1) throws Exception {
    //                            ImmutableMap.Builder<String, Object> builder = ImmutableMap.builder();
    //
    //                            TimeAgg a = v1._1;
    //                            BeforeAgg b = v1._2;
    //                            String todayStr = sdf.format(format.parse(a.getTimestamp()));
    //                            builder.put("server_ip", a.server_ip);
    //                            builder.put("protocal_type", a.protocal_type);
    //                            builder.put("client_site", a.client_site);
    //                            builder.put("vlan_id", a.vlan_id);
    //                            builder.put("subnet", a.subnet);
    //                            builder.put("timestamp", format.parse(a.timestamp));
    //                            if (b.packet_size > 0) {
    //                                builder.put("packet_size", b.packet_size);
    //                            }
    //                            if (b.c_packet_size > 0) {
    //                                builder.put("c_packet_size", b.c_packet_size);
    //                            }
    //
    //                            if (b.packet_count > 0) {
    //                                builder.put("packet_count", b.packet_count);
    //                            }
    //
    //                            if (b.losspacket_count > 0) {
    //                                builder.put("losspacket_count", b.losspacket_count);
    //                            }
    //                            if (b.total_rto > 0) {
    //                                builder.put("total_rto", b.total_rto);
    //                                builder.put("rtoCount", b.rtoCount);
    //                            }
    //
    //
    //                            if (b.tcpTurns > 0) {
    //                                builder.put("tcpTurns", b.tcpTurns);
    //                            }
    //                            if (b.connrequest_count > 0) {
    //                                builder.put("connrequest_count", b.connrequest_count);
    //                            }
    //                            if (b.abort > 0) {
    //                                builder.put("abort", b.abort);
    //                            }
    //                            if (b.client_rtt > 0) {
    //                                builder.put("client_rtt", b.client_rtt);
    //                                builder.put("clientJlRttCount", b.clientJlRttCount);
    //                            }
    //                            if (b.server_rtt > 0) {
    //                                builder.put("server_rtt", b.server_rtt);
    //                                builder.put("serverJlRttCount", b.serverJlRttCount);
    //                            }
    //
    //                            if (b.server_reponsetime > 0) {
    //                                builder.put("server_reponsetime", b.server_reponsetime);
    //                                builder.put("server_reponsetime_count", b.server_reponsetime_count);
    //                            }
    //
    //                            if (b.responseTransmissionTime > 0) {
    //                                builder.put("responseTransmissionTime", b.responseTransmissionTime);
    //                                builder.put("responseTransmissionTimeCount", b.responseTransmissionTimeCount);
    //                            }
    //                            if (b.requestTransmissionTime > 0) {
    //                                builder.put("requestTransmissionTime", b.requestTransmissionTime);
    //                                builder.put("requestTransmissionTimeCount", b.requestTransmissionTimeCount);
    //
    //                            }
    //
    //                            if (b.sAbortConnCount > 0) {
    //                                builder.put("sAbortConnCount", b.sAbortConnCount);
    //                            }
    //
    //                            if (b.userResponseTime > 0) {
    //                                builder.put("userResponseTime", b.userResponseTime);
    //                                builder.put("userResponseTimeCount", b.userResponseTimeCount);
    //                            }
    //                            if (b.c_bitpacket_account > 0) {
    //                                builder.put("c_bitpacket_account", b.c_bitpacket_account);
    //                            }
    //                            builder.put("index_name", todayStr);
    //
    //                            return builder.build();
    //                        }
    //                    }).cache();
    //                    if (es != null) {
    //                        JavaEsSpark.saveToEs(es, "ni-alert-session-{index_name}/alert", ImmutableMap.of
    //                                (ConfigurationOptions.ES_MAPPING_EXCLUDE, "index_name"));
    //                    }
    //                }
    //                return null;
    //            }
    //        });

    JavaPairDStream<TimeAgg, BeforeAgg> reduceByWindow = aggJavaPairDStream
            .reduceByKeyAndWindow(new Function2<BeforeAgg, BeforeAgg, BeforeAgg>() {
                @Override
                public BeforeAgg call(BeforeAgg v1, BeforeAgg v2) throws Exception {
                    BeforeAgg sum = new BeforeAgg();

                    sum.setPacket_size(v1.getPacket_size() + v2.getPacket_size());
                    sum.setC_packet_size(v1.getC_packet_size() + v2.getC_packet_size());
                    sum.setS_packet_size(v1.getS_packet_size() + v2.getS_packet_size());

                    sum.setPacket_count(v1.getPacket_count() + v2.getPacket_count());
                    sum.setC_packet_count(v1.getC_packet_count() + v2.getC_packet_count());
                    sum.setS_packet_count(v1.getS_packet_count() + v2.getS_packet_count());

                    sum.setLosspacket_count(v1.getLosspacket_count() + v2.getLosspacket_count());
                    sum.setTotal_rto(v1.getTotal_rto() + v2.getTotal_rto());
                    sum.setAbort(v1.getAbort() + v2.getAbort());

                    sum.setRequestTransmissionTime(
                            v1.getRequestTransmissionTime() + v2.getRequestTransmissionTime());
                    sum.setResponseTransmissionTime(
                            v1.getResponseTransmissionTime() + v2.getResponseTransmissionTime());
                    sum.setTcpTurns(v1.getTcpTurns() + v2.getTcpTurns());
                    sum.setConnrequest_count(v1.getConnrequest_count() + v2.getConnrequest_count());

                    sum.setRtt(v1.getRtt() + v2.getRtt());
                    sum.setClient_rtt(v1.getClient_rtt() + v2.getClient_rtt());
                    sum.setServer_rtt(v1.getServer_rtt() + v2.getServer_rtt());

                    sum.setServer_reponsetime(v1.getServer_reponsetime() + v2.getServer_reponsetime());
                    sum.setC_bitpacket_account(v1.getC_bitpacket_account() + v2.getC_bitpacket_account());
                    sum.setClientJlRttCount(v1.getClientJlRttCount() + v2.getClientJlRttCount());
                    sum.setServerJlRttCount(v1.getServerJlRttCount() + v2.getServerJlRttCount());
                    sum.setUserResponseTime(v1.getUserResponseTime() + v2.getUserResponseTime());
                    sum.setSessionCount(v1.sessionCount + v2.sessionCount);
                    sum.setsAbortConnCount(v1.sAbortConnCount + v2.sAbortConnCount);

                    sum.setCount(v1.getCount() + v2.getCount());

                    sum.setInt_CONGEST_COUNT(v1.int_CONGEST_COUNT + v2.int_CONGEST_COUNT);
                    sum.setInt_OOR_COUNT(v1.int_OOR_COUNT + v2.int_OOR_COUNT);
                    sum.setInt_ZWIN_COUNT(v1.int_ZWIN_COUNT + v2.int_ZWIN_COUNT);
                    sum.setMTU(v1.MTU + v2.MTU);

                    return sum;
                }
            }, Durations.seconds(300), Durations.seconds(60)).cache();

    reduceByWindow.foreachRDD(new Function<JavaPairRDD<TimeAgg, BeforeAgg>, Void>() {
        private static final long serialVersionUID = -4144342491397135515L;

        @Override
        public Void call(JavaPairRDD<TimeAgg, BeforeAgg> v1) throws Exception {

            if (v1.count() > 0) {

                /**
                 * getStartTime
                 */
                List<Long> timeList = v1.map(new Function<Tuple2<TimeAgg, BeforeAgg>, Long>() {
                    @Override
                    public Long call(Tuple2<TimeAgg, BeforeAgg> v1) throws Exception {
                        return format.parse(v1._1.getTimestamp()).getTime();
                    }
                }).distinct().collect();

                Collections.sort(timeList, new MyComparator());

                long a = timeList.get(3);

                final String time = format.format(new Date(a));

                long b = timeList.get(1);

                final String endTime = format.format(new Date(b));

                if (b > 0) {
                    JavaRDD<Map<String, ?>> active = v1
                            .filter(new Function<Tuple2<TimeAgg, BeforeAgg>, Boolean>() {
                                @Override
                                public Boolean call(Tuple2<TimeAgg, BeforeAgg> v1) throws Exception {
                                    String sInOutFlag = IPUtils.isInHomeNet(v1._1.getServer_ip(),
                                            flowConstant.HOMENET);

                                    return v1._1.getType().equals("tcp") && "IN".equals(sInOutFlag);

                                }
                            }).mapToPair(
                                    new PairFunction<Tuple2<TimeAgg, BeforeAgg>, Tuple2<String, String>, ConnectStatus>() {
                                        @Override
                                        public Tuple2<Tuple2<String, String>, ConnectStatus> call(
                                                Tuple2<TimeAgg, BeforeAgg> timeAggBeforeAggTuple2)
                                                throws Exception {
                                            ConnectStatus connectStatus = new ConnectStatus();
                                            String serverIp = timeAggBeforeAggTuple2._1.getServer_ip();
                                            String protoType = timeAggBeforeAggTuple2._1.getProtocal_type();
                                            TimeAgg a = timeAggBeforeAggTuple2._1;
                                            BeforeAgg b = timeAggBeforeAggTuple2._2;
                                            //
                                            if (format.parse(a.timestamp).getTime() == format.parse(endTime)
                                                    .getTime() && a.hasSyn) {
                                                connectStatus.setNewCreate(b.getCount());
                                            } else {
                                                connectStatus.setNewCreate(0);
                                            }

                                            //?breakreset?break
                                            if (format.parse(a.timeEnd).getTime() == format.parse(endTime)
                                                    .getTime() && (a.bool_FIN || a.bool_RST)) {
                                                connectStatus.setCloseConn(b.getCount());
                                            } else {
                                                connectStatus.setCloseConn(0);
                                            }

                                            if (format.parse(a.timestamp).getTime() <= format.parse(endTime)
                                                    .getTime()
                                                    && format.parse(a.timeEnd).getTime() > format.parse(endTime)
                                                            .getTime()
                                                    && a.hasSyn) {
                                                connectStatus.setActiveConn(b.getCount());
                                            } else if (format.parse(a.timestamp).getTime() == format
                                                    .parse(endTime).getTime()
                                                    && format.parse(a.timeEnd).getTime() == format
                                                            .parse(endTime).getTime()
                                                    && a.hasSyn) {
                                                connectStatus.setActiveConn(b.getCount());
                                            }

                                            return new Tuple2<>(new Tuple2<>(serverIp, protoType),
                                                    connectStatus);
                                        }
                                    })
                            .reduceByKey(new Function2<ConnectStatus, ConnectStatus, ConnectStatus>() {
                                @Override
                                public ConnectStatus call(ConnectStatus v1, ConnectStatus v2) throws Exception {
                                    ConnectStatus connectStatus = new ConnectStatus();
                                    connectStatus.setNewCreate(v1.newCreate + v2.newCreate);
                                    connectStatus.setActiveConn(v1.activeConn + v2.activeConn);
                                    connectStatus.setCloseConn(v1.closeConn + v2.closeConn);
                                    return connectStatus;
                                }
                            })
                            .map(new Function<Tuple2<Tuple2<String, String>, ConnectStatus>, Map<String, ?>>() {
                                @Override
                                public Map<String, ?> call(Tuple2<Tuple2<String, String>, ConnectStatus> v1)
                                        throws Exception {
                                    ImmutableMap.Builder<String, Object> builder = ImmutableMap.builder();
                                    String todayStr = sdf.format(format.parse(endTime));
                                    builder.put("server_ip", v1._1._1);
                                    builder.put("protocal_type", v1._1._2);
                                    builder.put("newCreateConn", v1._2.getNewCreate());
                                    builder.put("closeConn", v1._2.getCloseConn());
                                    builder.put("activeConn", v1._2.getActiveConn());
                                    builder.put("index_name", todayStr);
                                    builder.put("timestamp", format.parse(endTime));
                                    return builder.build();
                                }
                            }).cache();

                    if (active != null) {
                        JavaEsSpark.saveToEs(active, "ni-active-conn-{index_name}/active",
                                ImmutableMap.of(ConfigurationOptions.ES_MAPPING_EXCLUDE, "index_name"));
                    }
                }

                JavaPairRDD<TimeAgg, BeforeAgg> before = v1
                        .filter(new Function<Tuple2<TimeAgg, BeforeAgg>, Boolean>() {
                            @Override
                            public Boolean call(Tuple2<TimeAgg, BeforeAgg> v1) throws Exception {
                                return v1._1.getTimestamp().equals(time);
                            }
                        });

                if (Boolean.parseBoolean(getConfig("alert.cnf").getProperty("save.es")) && before != null) {
                    JavaRDD<Map<String, ?>> es = before
                            .map(new Function<Tuple2<TimeAgg, BeforeAgg>, Map<String, ?>>() {

                                @Override
                                public Map<String, ?> call(Tuple2<TimeAgg, BeforeAgg> v1) throws Exception {
                                    ImmutableMap.Builder<String, Object> builder = ImmutableMap.builder();

                                    TimeAgg a = v1._1;
                                    BeforeAgg b = v1._2;
                                    String todayStr = sdf.format(format.parse(a.getTimestamp()));
                                    builder.put("server_ip", a.server_ip);
                                    builder.put("protocal_type", a.protocal_type);
                                    builder.put("client_site", a.client_site);
                                    builder.put("vlan_id", a.vlan_id);
                                    builder.put("subnet", a.subnet);
                                    builder.put("timestamp", format.parse(a.timestamp));
                                    if (b.packet_size > 0) {
                                        builder.put("packet_size", b.packet_size);
                                    }
                                    if (b.c_packet_size > 0) {
                                        builder.put("c_packet_size", b.c_packet_size);
                                    }

                                    builder.put("count", b.count);

                                    if (b.packet_count > 0) {
                                        builder.put("packet_count", b.packet_count);
                                    }

                                    if (b.losspacket_count > 0) {
                                        builder.put("losspacket_count", b.losspacket_count);
                                    }
                                    if (b.total_rto > 0) {
                                        builder.put("total_rto", b.total_rto);
                                    }

                                    if (b.tcpTurns > 0) {
                                        builder.put("tcpTurns", b.tcpTurns);
                                        builder.put("sessionCount", b.sessionCount);
                                    }
                                    if (b.connrequest_count > 0) {
                                        builder.put("connrequest_count", b.connrequest_count);
                                    }
                                    if (b.abort > 0) {
                                        builder.put("abort", b.abort);
                                    }
                                    if (b.client_rtt > 0) {
                                        builder.put("client_rtt", b.client_rtt);
                                        builder.put("clientJlRttCount", b.clientJlRttCount);
                                    }
                                    if (b.server_rtt > 0) {
                                        builder.put("server_rtt", b.server_rtt);
                                        builder.put("serverJlRttCount", b.serverJlRttCount);
                                    }

                                    if (b.server_reponsetime > 0) {
                                        builder.put("server_reponsetime", b.server_reponsetime);
                                    }

                                    if (b.responseTransmissionTime > 0) {
                                        builder.put("responseTransmissionTime", b.responseTransmissionTime);
                                    }
                                    if (b.requestTransmissionTime > 0) {
                                        builder.put("requestTransmissionTime", b.requestTransmissionTime);

                                    }

                                    if (b.sAbortConnCount > 0) {
                                        builder.put("sAbortConnCount", b.sAbortConnCount);
                                    }

                                    if (b.userResponseTime > 0) {
                                        builder.put("userResponseTime", b.userResponseTime);
                                    }
                                    if (b.c_bitpacket_account > 0) {
                                        builder.put("c_bitpacket_account", b.c_bitpacket_account);
                                    }
                                    builder.put("index_name", todayStr);

                                    return builder.build();
                                }
                            }).cache();

                    if (es != null) {
                        JavaEsSpark.saveToEs(es, "ni-alert-session-{index_name}/alert",
                                ImmutableMap.of(ConfigurationOptions.ES_MAPPING_EXCLUDE, "index_name"));
                    }
                }

                UrlPostMethod.urlPostMethod(HEART_BEAT, "frequency=" + window);

                rules = zookeeperClient.getRules();

                if (rules != null) {

                    ArrayList<String> flagRules = new ArrayList<String>(); //?ruleType

                    for (final RuleRecover ruleRecover : rules) {

                        final Rule rule = ruleRecover.getRule();

                        if (rule.isEnable() && !flagRules.contains(rule.getType())) { //ruleType?

                            flagRules.add(rule.getType()); //ruleType?

                            JavaPairRDD<String, AggResult> alert = before.mapToPair(
                                    new PairFunction<Tuple2<TimeAgg, BeforeAgg>, String, BeforeAgg>() {
                                        @Override
                                        public Tuple2<String, BeforeAgg> call(
                                                Tuple2<TimeAgg, BeforeAgg> timeAggBeforeAggTuple2)
                                                throws Exception {
                                            Field field1 = timeAggBeforeAggTuple2._1.getClass()
                                                    .getDeclaredField(rule.getType());
                                            field1.setAccessible(true);
                                            String result1 = (String) field1.get(timeAggBeforeAggTuple2._1);
                                            if (rule.getType().equals("server_ip")) {
                                                String sInOutFlag = IPUtils.isInHomeNet(
                                                        timeAggBeforeAggTuple2._1.getServer_ip(),
                                                        flowConstant.HOMENET);
                                                if ("IN".equals(sInOutFlag)) {
                                                    return new Tuple2<>(result1, timeAggBeforeAggTuple2._2);
                                                } else {
                                                    return new Tuple2<>(result1, null);
                                                }
                                            } else {
                                                return new Tuple2<>(result1, timeAggBeforeAggTuple2._2);
                                            }
                                        }
                                    }).filter(new Function<Tuple2<String, BeforeAgg>, Boolean>() {
                                        @Override
                                        public Boolean call(Tuple2<String, BeforeAgg> v1) throws Exception {
                                            return v1._2 != null && !v1._1.equals("") && !v1._1.equals("-");
                                        }
                                    }).reduceByKey(new Function2<BeforeAgg, BeforeAgg, BeforeAgg>() {
                                        @Override
                                        public BeforeAgg call(BeforeAgg v1, BeforeAgg v2) throws Exception {
                                            BeforeAgg sum = new BeforeAgg();
                                            sum.setPacket_size(v1.getPacket_size() + v2.getPacket_size());
                                            sum.setC_packet_size(v1.getC_packet_size() + v2.getC_packet_size());
                                            sum.setS_packet_size(v1.getS_packet_size() + v2.getS_packet_size());

                                            sum.setPacket_count(v1.getPacket_count() + v2.getPacket_count());
                                            sum.setC_packet_count(
                                                    v1.getC_packet_count() + v2.getC_packet_count());
                                            sum.setS_packet_count(
                                                    v1.getS_packet_count() + v2.getS_packet_count());

                                            sum.setLosspacket_count(
                                                    v1.getLosspacket_count() + v2.getLosspacket_count());
                                            sum.setTotal_rto(v1.getTotal_rto() + v2.getTotal_rto());
                                            sum.setAbort(v1.getAbort() + v2.getAbort());

                                            sum.setRequestTransmissionTime(v1.getRequestTransmissionTime()
                                                    + v2.getRequestTransmissionTime());
                                            sum.setResponseTransmissionTime(v1.getResponseTransmissionTime()
                                                    + v2.getResponseTransmissionTime());

                                            sum.setTcpTurns(v1.getTcpTurns() + v2.getTcpTurns());
                                            sum.setConnrequest_count(
                                                    v1.getConnrequest_count() + v2.getConnrequest_count());

                                            sum.setRtt(v1.getRtt() + v2.getRtt());
                                            sum.setClient_rtt(v1.getClient_rtt() + v2.getClient_rtt());
                                            sum.setServer_rtt(v1.getServer_rtt() + v2.getServer_rtt());

                                            sum.setServer_reponsetime(
                                                    v1.getServer_reponsetime() + v2.getServer_reponsetime());
                                            sum.setC_bitpacket_account(
                                                    v1.getC_bitpacket_account() + v2.getC_bitpacket_account());
                                            sum.setClientJlRttCount(
                                                    v1.getClientJlRttCount() + v2.getClientJlRttCount());
                                            sum.setServerJlRttCount(
                                                    v1.getServerJlRttCount() + v2.getServerJlRttCount());
                                            sum.setUserResponseTime(
                                                    v1.getUserResponseTime() + v2.getUserResponseTime());
                                            sum.setSessionCount(v1.sessionCount + v2.sessionCount);
                                            sum.setsAbortConnCount(v1.sAbortConnCount + v2.sAbortConnCount);
                                            return sum;
                                        }
                                    }).mapToPair(
                                            new PairFunction<Tuple2<String, BeforeAgg>, String, AggResult>() {
                                                @Override
                                                public Tuple2<String, AggResult> call(
                                                        Tuple2<String, BeforeAgg> stringBeforeAggTuple2)
                                                        throws Exception {
                                                    BeforeAgg before = stringBeforeAggTuple2._2;
                                                    AggResult result = new AggResult();
                                                    result.setTimestamp(time);

                                                    result.setThroughput(before.packet_size * 8 / window);
                                                    result.setS_throughput(before.s_packet_size * 8 / window);
                                                    result.setC_throughput(
                                                            before.c_bitpacket_account * 8 / window);

                                                    result.setPacketThroughput(before.packet_count / window);
                                                    result.setLossRate(before.losspacket_count
                                                            / before.packet_count * 100);
                                                    if (before.sessionCount > 0) {
                                                        result.setRetransferTime(
                                                                before.total_rto / before.sessionCount);
                                                    } else {
                                                        result.setRetransferTime(0);
                                                    }

                                                    if (before.clientJlRttCount > 0) {

                                                        result.setClientRoundTripTime(
                                                                before.client_rtt / before.clientJlRttCount);
                                                        result.setRtt(before.rtt / before.clientJlRttCount);
                                                    } else {
                                                        result.setClientRoundTripTime(0);
                                                        result.setRtt(0);
                                                    }

                                                    if (before.serverJlRttCount > 0) {
                                                        result.setServerRoundTripTime(
                                                                before.server_rtt / before.serverJlRttCount);
                                                    } else {
                                                        result.setServerRoundTripTime(0);
                                                    }

                                                    if (before.sessionCount > 0) {
                                                        result.setUserRespTime(before.getUserResponseTime()
                                                                / before.sessionCount);
                                                        result.setTransmissionTime(
                                                                (before.requestTransmissionTime
                                                                        + before.responseTransmissionTime)
                                                                        / before.sessionCount);

                                                    } else {
                                                        result.setUserRespTime(0);
                                                        result.setTransmissionTime(0);
                                                    }

                                                    if (before.sessionCount > 0) {
                                                        result.setServerRespTime(before.server_reponsetime
                                                                / before.sessionCount);
                                                    } else {
                                                        result.setServerRespTime(0);
                                                    }

                                                    result.setConnectFailedRate(before.abort / window);

                                                    //@Deprecates
                                                    result.setTryConnectPer(0);

                                                    result.setCongest_pre(before.getInt_CONGEST_COUNT()
                                                            / before.getCount() * 100);
                                                    result.setOutoforder_pre(before.getInt_OOR_COUNT()
                                                            / before.getCount() * 100);
                                                    result.setZerowindow_pre(before.getInt_ZWIN_COUNT()
                                                            / before.getCount() * 100);
                                                    result.setMTU_pre(
                                                            before.getMTU() / before.getCount() * 100);

                                                    if (before.packet_count > 0) {
                                                        result.setcBitpacketAccount(before.c_bitpacket_account
                                                                / before.packet_count * 100);
                                                    } else {
                                                        result.setcBitpacketAccount(0);
                                                    }

                                                    if (before.connrequest_count - before.abort > 0) {
                                                        result.setAbortConntionCount(before.sAbortConnCount
                                                                / (before.connrequest_count - before.abort)
                                                                * 100);
                                                    } else {
                                                        result.setAbortConntionCount(0);
                                                    }

                                                    return new Tuple2<>(stringBeforeAggTuple2._1, result);
                                                }
                                            })
                                    .cache();

                            if (alert.count() > 0) {

                                List<String> alertList = new ArrayList<>();

                                for (final RuleRecover newRule : rules) {
                                    final Rule sameRule = newRule.getRule();
                                    if (Boolean.parseBoolean(getConfig("alert.cnf").getProperty("save.es"))) {
                                        System.out.println(
                                                "rule:" + sameRule.toString() + "--------------");
                                    }

                                    final int recover = newRule.getRecover();

                                    if (sameRule.isEnable()
                                            && sameRule.getType().equals(flagRules.get(flagRules.size() - 1))) {
                                        if (!sameRule.getThresholdErrType().equals("absolute")) {
                                            if (esGet.getClient() == null) {
                                                esGet.setNodeClient();
                                            }

                                            final Calendar now = Calendar.getInstance();

                                            now.setTime(format.parse(time));

                                            int minute = now.get(Calendar.MINUTE);

                                            Key key = null;

                                            switch (sameRule.getType()) {
                                            case "server_ip":
                                                if (minute % 5 != 0) {
                                                    now.set(Calendar.MINUTE, minute / 5 * 5);
                                                    if (broadHost.isEmpty()) {
                                                        Map<HostKey, BaseData> service = esGet
                                                                .setHost(now.getTime(), "ni-base-hostname");
                                                        broadHost.putAll(service);
                                                    }
                                                } else {
                                                    Map<HostKey, BaseData> service = esGet
                                                            .setHost(now.getTime(), "ni-base-hostname");
                                                    broadHost.clear();
                                                    broadHost.putAll(service);
                                                }
                                                key = new HostKey();
                                                //                                                        baseData = broadHost.get(key);
                                                break;
                                            case "protocal_type":
                                                if (minute % 5 != 0) {
                                                    now.set(Calendar.MINUTE, minute / 5 * 5);
                                                    if (broadService.isEmpty()) {
                                                        Map<ServiceKey, BaseData> service = esGet
                                                                .setService(now.getTime(), "ni-base-service");
                                                        broadService.putAll(service);
                                                    }
                                                } else {
                                                    Map<ServiceKey, BaseData> service = esGet
                                                            .setService(now.getTime(), "ni-base-service");
                                                    broadService.clear();
                                                    broadService.putAll(service);
                                                }
                                                key = new ServiceKey();
                                                //                                                        key.setKeyWord(stringAggResultTuple2._1);
                                                //                                                        key.setStart_timestamp(now.getTime());
                                                //                                                        baseData = broadService.get(key);
                                                break;
                                            case "client_site":
                                                if (minute % 5 != 0) {
                                                    now.set(Calendar.MINUTE, minute / 5 * 5);
                                                    if (broadClient.isEmpty()) {
                                                        Map<ClientKey, BaseData> service = esGet
                                                                .setClient(now.getTime(), "ni-base-clientsite");
                                                        broadClient.putAll(service);
                                                    }
                                                } else {
                                                    Map<ClientKey, BaseData> service = esGet
                                                            .setClient(now.getTime(), "ni-base-clientsite");
                                                    broadClient.clear();
                                                    broadClient.putAll(service);
                                                }
                                                key = new ClientKey();
                                                //                                                        key.setKeyWord(stringAggResultTuple2._1);
                                                //                                                        key.setStart_timestamp(now.getTime());
                                                //                                                        baseData = broadClient.get(key);
                                                break;
                                            case "vlan_id":
                                                if (minute % 5 != 0) {
                                                    now.set(Calendar.MINUTE, minute / 5 * 5);
                                                    if (broadVlan.isEmpty()) {
                                                        Map<VlanKey, BaseData> service = esGet
                                                                .setVlan(now.getTime(), "ni-base-link");
                                                        broadVlan.putAll(service);
                                                    }
                                                } else {
                                                    Map<VlanKey, BaseData> service = esGet
                                                            .setVlan(now.getTime(), "ni-base-link");
                                                    broadVlan.clear();
                                                    broadVlan.putAll(service);
                                                }
                                                key = new VlanKey();
                                                //                                                        key.setKeyWord(stringAggResultTuple2._1);
                                                //                                                        key.setStart_timestamp(now.getTime());
                                                //                                                        baseData = broadVlan.get(key);
                                                break;
                                            case "subnet":
                                                if (minute % 5 != 0) {
                                                    now.set(Calendar.MINUTE, minute / 5 * 5);
                                                    if (broadSubnet.isEmpty()) {
                                                        Map<SubnetKey, BaseData> service = esGet
                                                                .setSubnet(now.getTime(), "ni-base-subnet");
                                                        broadSubnet.putAll(service);
                                                    }
                                                } else {
                                                    Map<SubnetKey, BaseData> service = esGet
                                                            .setSubnet(now.getTime(), "ni-base-subnet");
                                                    broadSubnet.clear();
                                                    broadSubnet.putAll(service);
                                                }
                                                key = new SubnetKey();
                                                //                                                        key.setKeyWord(stringAggResultTuple2._1);
                                                //                                                        key.setStart_timestamp(now.getTime());
                                                //                                                        baseData = broadSubnet.get(key);
                                                break;
                                            }

                                            final Key finalKey = key;
                                            alertList = alert
                                                    .filter(new Function<Tuple2<String, AggResult>, Boolean>() {
                                                        @Override
                                                        public Boolean call(Tuple2<String, AggResult> v1)
                                                                throws Exception {
                                                            Field field2 = v1._2.getClass()
                                                                    .getDeclaredField(sameRule.getValue());
                                                            field2.setAccessible(true);
                                                            double result2 = (double) field2.get(v1._2);
                                                            if (result2 == 0) {
                                                                return false;
                                                            }
                                                            String contain = sameRule.getContain();
                                                            if (contain.equals("") && !v1._1.equals("")) {
                                                                return true;
                                                            }
                                                            if (v1._1 == null || v1._1.equals("")) {
                                                                return false;
                                                            }
                                                            return v1._1.contains(sameRule.getContain());
                                                        }
                                                    }).mapToPair(
                                                            new PairFunction<Tuple2<String, AggResult>, String, String>() {
                                                                @Override
                                                                public Tuple2<String, String> call(
                                                                        Tuple2<String, AggResult> stringAggResultTuple2)
                                                                        throws Exception {

                                                                    Field field2 = stringAggResultTuple2._2
                                                                            .getClass().getDeclaredField(
                                                                                    sameRule.getValue());
                                                                    field2.setAccessible(true);
                                                                    double alertCursor = (double) field2
                                                                            .get(stringAggResultTuple2._2);

                                                                    JSONObject json = new JSONObject();
                                                                    BaseData baseData = new BaseData();

                                                                    finalKey.setKeyWord(
                                                                            stringAggResultTuple2._1);
                                                                    finalKey.setStart_timestamp(now.getTime());
                                                                    baseData = broadService.get(finalKey);

                                                                    if (baseData != null) {
                                                                        Field field = baseData.getClass()
                                                                                .getDeclaredField(
                                                                                        sameRule.getValue());
                                                                        field.setAccessible(true);
                                                                        double result = (double) field
                                                                                .get(baseData);

                                                                        AlertLevel alertLevel = new AlertLevel();

                                                                        if (sameRule.getThresholdErrOp()
                                                                                .equals("ge")) {
                                                                            if (alertCursor - result >= sameRule
                                                                                    .getMax_cardinality()) {
                                                                                alertLevel.setWarningLevel(
                                                                                        "levelBad");

                                                                            } else if (alertCursor
                                                                                    - result >= sameRule
                                                                                            .getMin_cardinality()) {
                                                                                alertLevel.setWarningLevel(
                                                                                        "levelWarn");

                                                                            } else {
                                                                                alertLevel.setWarningLevel(
                                                                                        "levelNormal");
                                                                            }
                                                                        }

                                                                        if (sameRule.getThresholdErrOp()
                                                                                .equals("le")) {
                                                                            if (result - alertCursor <= sameRule
                                                                                    .getMax_cardinality()) {
                                                                                alertLevel.setWarningLevel(
                                                                                        "levelBad");
                                                                            } else if (result
                                                                                    - alertCursor <= sameRule
                                                                                            .getMin_cardinality()) {
                                                                                alertLevel.setWarningLevel(
                                                                                        "levelWarn");
                                                                            } else {
                                                                                alertLevel.setWarningLevel(
                                                                                        "levelNormal");
                                                                            }
                                                                        }

                                                                        alertLevel.setResourceName(
                                                                                stringAggResultTuple2._1);
                                                                        if (sameRule.getType()
                                                                                .equals("server_ip")) {
                                                                            alertLevel.setIpAddress(
                                                                                    stringAggResultTuple2._1);
                                                                        } else {
                                                                            alertLevel.setIpAddress("");
                                                                        }
                                                                        alertLevel.setOccureTime(
                                                                                esFormat.format(format.parse(
                                                                                        stringAggResultTuple2._2
                                                                                                .getTimestamp())));
                                                                        alertLevel.setResourceType(
                                                                                sameRule.getType());
                                                                        alertLevel.setMetricId(
                                                                                sameRule.getValue());
                                                                        alertLevel.setResourceInstanceId(
                                                                                stringAggResultTuple2._1);

                                                                        // top2  d?>10%?
                                                                        Map<String, Double> top2 = new HashMap<String, Double>();
                                                                        top2.put("MTU?",
                                                                                stringAggResultTuple2._2
                                                                                        .getMTU_pre());
                                                                        top2.put("?",
                                                                                stringAggResultTuple2._2
                                                                                        .getCongest_pre());
                                                                        top2.put("??",
                                                                                stringAggResultTuple2._2
                                                                                        .getOutoforder_pre());
                                                                        top2.put("??",
                                                                                stringAggResultTuple2._2
                                                                                        .getZerowindow_pre());
                                                                        List<Map.Entry<String, Double>> list = SortHashMap
                                                                                .sortHashMap(top2);

                                                                        if ("lossRate"
                                                                                .equals(sameRule.getValue())) {
                                                                            if (list.get(0).getValue() > 10
                                                                                    && list.get(1)
                                                                                            .getValue() > 10) {
                                                                                alertLevel.setWarningContent(
                                                                                        alertLevel.getMetricId()
                                                                                                + ""
                                                                                                + df.format(
                                                                                                        alertCursor)
                                                                                                + "%25,"
                                                                                                + list.get(0)
                                                                                                        .getKey()
                                                                                                + ""
                                                                                                + list.get(0)
                                                                                                        .getValue()
                                                                                                + "%25,"
                                                                                                + list.get(1)
                                                                                                        .getKey()
                                                                                                + ""
                                                                                                + list.get(1)
                                                                                                        .getValue()
                                                                                                + "%25."
                                                                                                + result
                                                                                                + "."
                                                                                                + sameRule
                                                                                                        .getMin_cardinality()
                                                                                                + ","
                                                                                                + sameRule
                                                                                                        .getMax_cardinality());
                                                                            } else {
                                                                                alertLevel.setWarningContent(
                                                                                        alertLevel.getMetricId()
                                                                                                + ""
                                                                                                + df.format(
                                                                                                        alertCursor)
                                                                                                + "%25,"
                                                                                                + result
                                                                                                + "."
                                                                                                + sameRule
                                                                                                        .getMin_cardinality()
                                                                                                + ","
                                                                                                + sameRule
                                                                                                        .getMax_cardinality());
                                                                            }
                                                                        } else {
                                                                            if ("userRespTime".equals(
                                                                                    sameRule.getValue())) {
                                                                                if (list.get(0).getValue() > 10
                                                                                        && list.get(1)
                                                                                                .getValue() > 10) {
                                                                                    alertLevel
                                                                                            .setWarningContent(
                                                                                                    alertLevel
                                                                                                            .getMetricId()
                                                                                                            + ""
                                                                                                            + millToSec(
                                                                                                                    (long) alertCursor)
                                                                                                            + ","
                                                                                                            + millToSec(
                                                                                                                    (long) stringAggResultTuple2._2
                                                                                                                            .getRtt())
                                                                                                            + "ms,?"
                                                                                                            + millToSec(
                                                                                                                    (long) stringAggResultTuple2._2
                                                                                                                            .getServerRespTime())
                                                                                                            + "ms,"
                                                                                                            + millToSec(
                                                                                                                    (long) stringAggResultTuple2._2
                                                                                                                            .getTransmissionTime())
                                                                                                            + "ms,?"
                                                                                                            + millToSec(
                                                                                                                    (long) stringAggResultTuple2._2
                                                                                                                            .getRetransferTime())
                                                                                                            + "."
                                                                                                            + list.get(
                                                                                                                    0)
                                                                                                                    .getKey()
                                                                                                            + ""
                                                                                                            + list.get(
                                                                                                                    0)
                                                                                                                    .getValue()
                                                                                                            + "%25,"
                                                                                                            + list.get(
                                                                                                                    1)
                                                                                                                    .getKey()
                                                                                                            + ""
                                                                                                            + list.get(
                                                                                                                    1)
                                                                                                                    .getValue()
                                                                                                            + "%25."
                                                                                                            + result
                                                                                                            + "."
                                                                                                            + sameRule
                                                                                                                    .getMin_cardinality()
                                                                                                            + ","
                                                                                                            + sameRule
                                                                                                                    .getMax_cardinality());
                                                                                } else {
                                                                                    alertLevel
                                                                                            .setWarningContent(
                                                                                                    alertLevel
                                                                                                            .getMetricId()
                                                                                                            + ""
                                                                                                            + millToSec(
                                                                                                                    (long) alertCursor)
                                                                                                            + ","
                                                                                                            + millToSec(
                                                                                                                    (long) stringAggResultTuple2._2
                                                                                                                            .getRtt())
                                                                                                            + "ms,?"
                                                                                                            + millToSec(
                                                                                                                    (long) stringAggResultTuple2._2
                                                                                                                            .getServerRespTime())
                                                                                                            + "ms,"
                                                                                                            + millToSec(
                                                                                                                    (long) stringAggResultTuple2._2
                                                                                                                            .getTransmissionTime())
                                                                                                            + "ms,?"
                                                                                                            + millToSec(
                                                                                                                    (long) stringAggResultTuple2._2
                                                                                                                            .getRetransferTime())
                                                                                                            + "."
                                                                                                            + result
                                                                                                            + "."
                                                                                                            + sameRule
                                                                                                                    .getMin_cardinality()
                                                                                                            + ","
                                                                                                            + sameRule
                                                                                                                    .getMax_cardinality());
                                                                                }
                                                                            } else if ("rtt".equals(
                                                                                    sameRule.getValue())) {
                                                                                alertLevel.setWarningContent(
                                                                                        "RTT" + millToSec(
                                                                                                (long) alertCursor)
                                                                                                + ",RTT"
                                                                                                + millToSec(
                                                                                                        (long) stringAggResultTuple2._2
                                                                                                                .getClientRoundTripTime())
                                                                                                + "ms,?RTT"
                                                                                                + millToSec(
                                                                                                        (long) stringAggResultTuple2._2
                                                                                                                .getServerRoundTripTime())
                                                                                                + "ms."
                                                                                                + result
                                                                                                + "."
                                                                                                + sameRule
                                                                                                        .getMin_cardinality()
                                                                                                + ","
                                                                                                + sameRule
                                                                                                        .getMax_cardinality());
                                                                            } else if ("throughput".equals(
                                                                                    sameRule.getType())) {
                                                                                alertLevel.setWarningContent(
                                                                                        alertLevel.getMetricId()
                                                                                                + ""
                                                                                                + convertUnit(
                                                                                                        (long) alertCursor)
                                                                                                + ",????"
                                                                                                + convertUnit(
                                                                                                        (long) stringAggResultTuple2._2
                                                                                                                .getS_throughput())
                                                                                                + ",????"
                                                                                                + convertUnit(
                                                                                                        (long) stringAggResultTuple2._2
                                                                                                                .getC_throughput())
                                                                                                + "."
                                                                                                + convertUnit(
                                                                                                        (long) result)
                                                                                                + "."
                                                                                                + sameRule
                                                                                                        .getMin_cardinality()
                                                                                                + ","
                                                                                                + sameRule
                                                                                                        .getMax_cardinality());
                                                                            } else if ("packetThroughput"
                                                                                    .equals(sameRule
                                                                                            .getValue())) {
                                                                                alertLevel.setWarningContent(
                                                                                        alertLevel.getMetricId()
                                                                                                + ""
                                                                                                + df.format(
                                                                                                        alertCursor)
                                                                                                + ",????"
                                                                                                + stringAggResultTuple2._2
                                                                                                        .getS_packetThroughput()
                                                                                                + ",????"
                                                                                                + stringAggResultTuple2._2
                                                                                                        .getC_packetThroughput()
                                                                                                + "."
                                                                                                + result
                                                                                                + "."
                                                                                                + sameRule
                                                                                                        .getMin_cardinality()
                                                                                                + ","
                                                                                                + sameRule
                                                                                                        .getMax_cardinality());
                                                                            } else if (percent.contains(
                                                                                    sameRule.getValue())) {
                                                                                alertLevel.setWarningContent(
                                                                                        alertLevel.getMetricId()
                                                                                                + ""
                                                                                                + df.format(
                                                                                                        alertCursor)
                                                                                                + "%25,"
                                                                                                + sameRule
                                                                                                        .getMin_cardinality()
                                                                                                + "."
                                                                                                + result
                                                                                                + "."
                                                                                                + sameRule
                                                                                                        .getMax_cardinality());
                                                                            } else {
                                                                                alertLevel.setWarningContent(
                                                                                        alertLevel.getMetricId()
                                                                                                + ""
                                                                                                + df.format(
                                                                                                        alertCursor)
                                                                                                + "."
                                                                                                + result
                                                                                                + "."
                                                                                                + sameRule
                                                                                                        .getMin_cardinality()
                                                                                                + ","
                                                                                                + sameRule
                                                                                                        .getMax_cardinality());
                                                                            }
                                                                        }

                                                                        alertLevel.setRuleId(
                                                                                sameRule.getRuleName());
                                                                        alertLevel.setUniqueMark(sameRule
                                                                                .getRuleName() + "-"
                                                                                + stringAggResultTuple2._1 + "-"
                                                                                + sameRule.getValue());

                                                                        if (stats.containsKey(
                                                                                alertLevel.getUniqueMark())) {
                                                                            String preLevel = stats
                                                                                    .get(alertLevel
                                                                                            .getUniqueMark())._1;
                                                                            int num = stats.get(alertLevel
                                                                                    .getUniqueMark())._2;
                                                                            boolean preWarning = preLevel
                                                                                    .equals("levelWarn")
                                                                                    || preLevel
                                                                                            .equals("levelBad");
                                                                            boolean newWarning = alertLevel
                                                                                    .getWarningLevel()
                                                                                    .equals("levelWarn")
                                                                                    || alertLevel
                                                                                            .getWarningLevel()
                                                                                            .equals("levelBad");
                                                                            if (preWarning && !newWarning) {
                                                                                num = 1 - num;
                                                                                stats.put(alertLevel
                                                                                        .getUniqueMark(),
                                                                                        new Tuple2<String, Integer>(
                                                                                                alertLevel
                                                                                                        .getWarningLevel(),
                                                                                                num));
                                                                            } else if (!preWarning
                                                                                    && newWarning) {
                                                                                stats.put(alertLevel
                                                                                        .getUniqueMark(),
                                                                                        new Tuple2<String, Integer>(
                                                                                                alertLevel
                                                                                                        .getWarningLevel(),
                                                                                                0 - recover));
                                                                            } else if (!preWarning
                                                                                    && !preWarning) {
                                                                                num = 1 - num;
                                                                                stats.put(alertLevel
                                                                                        .getUniqueMark(),
                                                                                        new Tuple2<String, Integer>(
                                                                                                alertLevel
                                                                                                        .getWarningLevel(),
                                                                                                num));
                                                                            } else {
                                                                                num = 0 - num;
                                                                                stats.put(alertLevel
                                                                                        .getUniqueMark(),
                                                                                        new Tuple2<String, Integer>(
                                                                                                alertLevel
                                                                                                        .getWarningLevel(),
                                                                                                num));
                                                                            }
                                                                        } else {
                                                                            if (alertLevel.getWarningLevel()
                                                                                    .equals("levelWarn")
                                                                                    || alertLevel
                                                                                            .getWarningLevel()
                                                                                            .equals("levelBad")) {
                                                                                stats.put(alertLevel
                                                                                        .getUniqueMark(),
                                                                                        new Tuple2<String, Integer>(
                                                                                                alertLevel
                                                                                                        .getWarningLevel(),
                                                                                                0 - recover));
                                                                                json = (JSONObject) JSON
                                                                                        .toJSON(alertLevel);
                                                                                return new Tuple2<>(
                                                                                        stringAggResultTuple2._1,
                                                                                        json.toString());
                                                                            }
                                                                        }
                                                                    }

                                                                    return new Tuple2<>(
                                                                            stringAggResultTuple2._1, "");
                                                                }
                                                            })
                                                    .filter(new Function<Tuple2<String, String>, Boolean>() {
                                                        @Override
                                                        public Boolean call(Tuple2<String, String> v1)
                                                                throws Exception {
                                                            return !v1._2.equals("") && v1._2 != null;
                                                        }
                                                    }).map(new Function<Tuple2<String, String>, String>() {
                                                        @Override
                                                        public String call(Tuple2<String, String> v1)
                                                                throws Exception {
                                                            return v1._2;
                                                        }
                                                    }).collect();

                                        } else {
                                            alertList = alert
                                                    .filter(new Function<Tuple2<String, AggResult>, Boolean>() {
                                                        @Override
                                                        public Boolean call(Tuple2<String, AggResult> v1)
                                                                throws Exception {
                                                            Field field2 = v1._2.getClass()
                                                                    .getDeclaredField(sameRule.getValue());
                                                            field2.setAccessible(true);
                                                            double result2 = (double) field2.get(v1._2);
                                                            if (result2 == 0.0) {
                                                                return false;
                                                            }
                                                            String contain = sameRule.getContain();
                                                            if (contain.equals("") && !v1._1.equals("")) {
                                                                return true;
                                                            }
                                                            if (v1._1 == null || v1._1.equals("")) {
                                                                return false;
                                                            }
                                                            return v1._1.contains(sameRule.getContain());
                                                        }
                                                    }).mapToPair(
                                                            new PairFunction<Tuple2<String, AggResult>, String, String>() {

                                                                @Override
                                                                public Tuple2<String, String> call(
                                                                        Tuple2<String, AggResult> stringAggResultTuple2)
                                                                        throws Exception {
                                                                    Field field2 = stringAggResultTuple2._2
                                                                            .getClass().getDeclaredField(
                                                                                    sameRule.getValue());
                                                                    field2.setAccessible(true);
                                                                    double alertCursor = (double) field2
                                                                            .get(stringAggResultTuple2._2);
                                                                    JSONObject json = new JSONObject();
                                                                    AlertLevel alertLevel = new AlertLevel();
                                                                    if (alertCursor >= sameRule
                                                                            .getMax_cardinality()) {
                                                                        alertLevel.setWarningLevel("levelBad");

                                                                    } else if (alertCursor >= sameRule
                                                                            .getMin_cardinality()) {
                                                                        alertLevel.setWarningLevel("levelWarn");
                                                                    } else {
                                                                        alertLevel
                                                                                .setWarningLevel("levelNormal");
                                                                    }

                                                                    alertLevel.setResourceName(
                                                                            stringAggResultTuple2._1);
                                                                    if (sameRule.getType()
                                                                            .equals("server_ip")) {
                                                                        alertLevel.setIpAddress(
                                                                                stringAggResultTuple2._1);
                                                                    } else {
                                                                        alertLevel.setIpAddress("");
                                                                    }

                                                                    alertLevel.setResourceType(
                                                                            sameRule.getType());
                                                                    alertLevel.setOccureTime(
                                                                            esFormat.format(format.parse(
                                                                                    stringAggResultTuple2._2
                                                                                            .getTimestamp())));
                                                                    alertLevel.setMetricId(sameRule.getValue());
                                                                    alertLevel.setResourceInstanceId(
                                                                            stringAggResultTuple2._1);

                                                                    // top2  d?>10%?
                                                                    Map<String, Double> top2 = new HashMap<String, Double>();
                                                                    top2.put("MTU?",
                                                                            stringAggResultTuple2._2
                                                                                    .getMTU_pre());
                                                                    top2.put("?",
                                                                            stringAggResultTuple2._2
                                                                                    .getCongest_pre());
                                                                    top2.put("??",
                                                                            stringAggResultTuple2._2
                                                                                    .getOutoforder_pre());
                                                                    top2.put("??",
                                                                            stringAggResultTuple2._2
                                                                                    .getZerowindow_pre());
                                                                    List<Map.Entry<String, Double>> list = SortHashMap
                                                                            .sortHashMap(top2);

                                                                    if ("lossRate"
                                                                            .equals(sameRule.getValue())) {
                                                                        if (list.get(0).getValue() > 10 && list
                                                                                .get(1).getValue() > 10) {
                                                                            alertLevel.setWarningContent(
                                                                                    alertLevel.getMetricId()
                                                                                            + ""
                                                                                            + df.format(
                                                                                                    alertCursor)
                                                                                            + "%25,"
                                                                                            + list.get(0)
                                                                                                    .getKey()
                                                                                            + ""
                                                                                            + list.get(0)
                                                                                                    .getValue()
                                                                                            + "%25,"
                                                                                            + list.get(1)
                                                                                                    .getKey()
                                                                                            + ""
                                                                                            + list.get(1)
                                                                                                    .getValue()
                                                                                            + "%25."
                                                                                            + ""
                                                                                            + sameRule
                                                                                                    .getMin_cardinality()
                                                                                            + ","
                                                                                            + sameRule
                                                                                                    .getMax_cardinality());
                                                                        } else {
                                                                            alertLevel.setWarningContent(
                                                                                    alertLevel.getMetricId()
                                                                                            + ""
                                                                                            + df.format(
                                                                                                    alertCursor)
                                                                                            + "%25,"
                                                                                            + ","
                                                                                            + sameRule
                                                                                                    .getMin_cardinality()
                                                                                            + ","
                                                                                            + sameRule
                                                                                                    .getMax_cardinality());
                                                                        }
                                                                    } else if ("userRespTime"
                                                                            .equals(sameRule.getValue())) {
                                                                        if (list.get(0).getValue() > 10 && list
                                                                                .get(1).getValue() > 10) {
                                                                            alertLevel.setWarningContent(
                                                                                    alertLevel.getMetricId()
                                                                                            + ""
                                                                                            + millToSec(
                                                                                                    (long) alertCursor)
                                                                                            + ","
                                                                                            + millToSec(
                                                                                                    (long) stringAggResultTuple2._2
                                                                                                            .getRtt())
                                                                                            + ",?"
                                                                                            + millToSec(
                                                                                                    (long) stringAggResultTuple2._2
                                                                                                            .getServerRespTime())
                                                                                            + ","
                                                                                            + millToSec(
                                                                                                    (long) stringAggResultTuple2._2
                                                                                                            .getTransmissionTime())
                                                                                            + "?"
                                                                                            + millToSec(
                                                                                                    (long) stringAggResultTuple2._2
                                                                                                            .getRetransferTime())
                                                                                            + "."
                                                                                            + list.get(0)
                                                                                                    .getKey()
                                                                                            + ""
                                                                                            + list.get(0)
                                                                                                    .getValue()
                                                                                            + "%25,"
                                                                                            + list.get(1)
                                                                                                    .getKey()
                                                                                            + ""
                                                                                            + list.get(1)
                                                                                                    .getValue()
                                                                                            + "%25."
                                                                                            + ""
                                                                                            + sameRule
                                                                                                    .getMin_cardinality()
                                                                                            + ","
                                                                                            + sameRule
                                                                                                    .getMax_cardinality());
                                                                        } else {
                                                                            alertLevel.setWarningContent(
                                                                                    alertLevel.getMetricId()
                                                                                            + ""
                                                                                            + millToSec(
                                                                                                    (long) alertCursor)
                                                                                            + ","
                                                                                            + millToSec(
                                                                                                    (long) stringAggResultTuple2._2
                                                                                                            .getRtt())
                                                                                            + ",?"
                                                                                            + millToSec(
                                                                                                    (long) stringAggResultTuple2._2
                                                                                                            .getServerRespTime())
                                                                                            + ","
                                                                                            + millToSec(
                                                                                                    (long) stringAggResultTuple2._2
                                                                                                            .getTransmissionTime())
                                                                                            + "?"
                                                                                            + millToSec(
                                                                                                    (long) stringAggResultTuple2._2
                                                                                                            .getRetransferTime())
                                                                                            + "."
                                                                                            + sameRule
                                                                                                    .getMin_cardinality()
                                                                                            + ","
                                                                                            + sameRule
                                                                                                    .getMax_cardinality());
                                                                        }
                                                                    } else if ("rtt"
                                                                            .equals(sameRule.getValue())) {
                                                                        alertLevel.setWarningContent("RTT"
                                                                                + millToSec((long) alertCursor)
                                                                                + ",RTT"
                                                                                + millToSec(
                                                                                        (long) stringAggResultTuple2._2
                                                                                                .getClientRoundTripTime())
                                                                                + ",?RTT"
                                                                                + millToSec(
                                                                                        (long) stringAggResultTuple2._2
                                                                                                .getServerRoundTripTime())
                                                                                + "."
                                                                                + sameRule.getMin_cardinality()
                                                                                + "," + sameRule
                                                                                        .getMax_cardinality());
                                                                    } else if ("throughput"
                                                                            .equals(sameRule.getType())) {
                                                                        alertLevel.setWarningContent(alertLevel
                                                                                .getMetricId()
                                                                                + ""
                                                                                + convertUnit(
                                                                                        (long) alertCursor)
                                                                                + ",????"
                                                                                + convertUnit(
                                                                                        (long) stringAggResultTuple2._2
                                                                                                .getS_throughput())
                                                                                + ",????"
                                                                                + convertUnit(
                                                                                        (long) stringAggResultTuple2._2
                                                                                                .getC_throughput())
                                                                                + "."
                                                                                + sameRule.getMin_cardinality()
                                                                                + "," + sameRule
                                                                                        .getMax_cardinality());
                                                                    } else if ("packetThroughput"
                                                                            .equals(sameRule.getValue())) {
                                                                        alertLevel.setWarningContent(alertLevel
                                                                                .getMetricId() + ""
                                                                                + df.format(alertCursor)
                                                                                + ",????"
                                                                                + stringAggResultTuple2._2
                                                                                        .getS_packetThroughput()
                                                                                + ",????"
                                                                                + stringAggResultTuple2._2
                                                                                        .getC_packetThroughput()
                                                                                + "."
                                                                                + sameRule.getMin_cardinality()
                                                                                + "," + sameRule
                                                                                        .getMax_cardinality());
                                                                    } else if (percent
                                                                            .contains(sameRule.getValue())) {
                                                                        alertLevel.setWarningContent(alertLevel
                                                                                .getMetricId() + ""
                                                                                + df.format(alertCursor)
                                                                                + "%25,"
                                                                                + sameRule.getMin_cardinality()
                                                                                + "," + sameRule
                                                                                        .getMax_cardinality());
                                                                    } else {
                                                                        alertLevel.setWarningContent(alertLevel
                                                                                .getMetricId() + ""
                                                                                + df.format(alertCursor)
                                                                                + ","
                                                                                + sameRule.getMin_cardinality()
                                                                                + "," + sameRule
                                                                                        .getMax_cardinality());
                                                                    }
                                                                    alertLevel
                                                                            .setRuleId(sameRule.getRuleName());
                                                                    alertLevel.setUniqueMark(
                                                                            sameRule.getRuleName() + "-"
                                                                                    + stringAggResultTuple2._1
                                                                                    + "-"
                                                                                    + sameRule.getValue());

                                                                    if (stats.containsKey(
                                                                            alertLevel.getUniqueMark())) {
                                                                        String preLevel = stats.get(
                                                                                alertLevel.getUniqueMark())._1;
                                                                        int num = stats.get(
                                                                                alertLevel.getUniqueMark())._2;
                                                                        boolean preWarning = preLevel
                                                                                .equals("levelWarn")
                                                                                || preLevel.equals("levelBad");
                                                                        boolean newWarning = alertLevel
                                                                                .getWarningLevel()
                                                                                .equals("levelWarn")
                                                                                || alertLevel.getWarningLevel()
                                                                                        .equals("levelBad");
                                                                        if (preWarning && !newWarning) {
                                                                            num = 1 - num;
                                                                            stats.put(
                                                                                    alertLevel.getUniqueMark(),
                                                                                    new Tuple2<String, Integer>(
                                                                                            alertLevel
                                                                                                    .getWarningLevel(),
                                                                                            num));
                                                                        } else if (!preWarning && newWarning) {
                                                                            stats.put(
                                                                                    alertLevel.getUniqueMark(),
                                                                                    new Tuple2<String, Integer>(
                                                                                            alertLevel
                                                                                                    .getWarningLevel(),
                                                                                            0 - recover));
                                                                        } else if (!preWarning && !preWarning) {
                                                                            num = 1 - num;
                                                                            stats.put(
                                                                                    alertLevel.getUniqueMark(),
                                                                                    new Tuple2<String, Integer>(
                                                                                            alertLevel
                                                                                                    .getWarningLevel(),
                                                                                            num));
                                                                        } else {
                                                                            num = 0 - num;
                                                                            stats.put(
                                                                                    alertLevel.getUniqueMark(),
                                                                                    new Tuple2<String, Integer>(
                                                                                            alertLevel
                                                                                                    .getWarningLevel(),
                                                                                            num));
                                                                        }
                                                                    } else {
                                                                        if (alertLevel.getWarningLevel()
                                                                                .equals("levelWarn")
                                                                                || alertLevel.getWarningLevel()
                                                                                        .equals("levelBad")) {
                                                                            stats.put(
                                                                                    alertLevel.getUniqueMark(),
                                                                                    new Tuple2<String, Integer>(
                                                                                            alertLevel
                                                                                                    .getWarningLevel(),
                                                                                            0 - recover));
                                                                            json = (JSONObject) JSON
                                                                                    .toJSON(alertLevel);
                                                                            return new Tuple2<>(
                                                                                    stringAggResultTuple2._1,
                                                                                    json.toString());
                                                                        }
                                                                    }

                                                                    return new Tuple2<>(
                                                                            stringAggResultTuple2._1, "");
                                                                }
                                                            })
                                                    .filter(new Function<Tuple2<String, String>, Boolean>() {

                                                        private static final long serialVersionUID = 662946729452638751L;

                                                        @Override
                                                        public Boolean call(Tuple2<String, String> v1)
                                                                throws Exception {
                                                            return !v1._2.equals("") && v1._2 != null;
                                                        }
                                                    }).map(new Function<Tuple2<String, String>, String>() {
                                                        @Override
                                                        public String call(Tuple2<String, String> v1)
                                                                throws Exception {
                                                            return v1._2;
                                                        }
                                                    }).collect();
                                        }
                                    }

                                    jsonList.addAll(alertList);

                                    alertList.clear();
                                }
                            }
                        }
                    }

                    flagRules.clear();
                }

                Iterator<Map.Entry<String, Tuple2<String, Integer>>> iterator = stats.entrySet().iterator();

                while (iterator.hasNext()) {
                    Map.Entry<String, Tuple2<String, Integer>> entry = iterator.next();
                    int num = entry.getValue()._2;
                    if (num == 0) {
                        UrlPostMethod.urlPostMethod(RECOVER, entry.getValue()._1);
                        iterator.remove();
                    } else if (num < 0) {
                        num = 0 - num;
                        entry.setValue(new Tuple2<String, Integer>(entry.getValue()._1, num));
                    } else {
                        num = 1 - num;
                        if (num == 0) {
                            UrlPostMethod.urlPostMethod(RECOVER, entry.getValue()._1);
                            iterator.remove();
                        } else {
                            entry.setValue(new Tuple2<String, Integer>(entry.getValue()._1, num));
                        }
                    }
                }

                if (stats.size() > 200000) {
                    stats.clear();
                }

                if (jsonList.size() > 0) {
                    if (Boolean.parseBoolean(getConfig("alert.cnf").getProperty("save.es"))) {
                        System.out.println(
                                "-------------------" + jsonList.toString() + "-----------------------");
                    }

                    for (int i = 0; i <= jsonList.size() / 2000; i++) {
                        UrlPostMethod.urlPostMethod(URL, "warnings=" + Arrays.asList(Arrays.copyOfRange(
                                jsonList.toArray(), i * 2000,
                                (i + 1) * 2000 - 1 > jsonList.size() ? jsonList.size() : (i + 1) * 2000 - 1))
                                .toString());
                    }

                    jsonList.clear();
                }
            }

            return null;
        }
    });

    rawStream.context().start();
    rawStream.context().awaitTermination();

}

From source file:com.moviejukebox.MovieJukebox.java

public static void main(String[] args) throws Throwable {
    JukeboxStatistics.setTimeStart(System.currentTimeMillis());

    // Create the log file name here, so we can change it later (because it's locked
    System.setProperty("file.name", LOG_FILENAME);
    PropertyConfigurator.configure("properties/log4j.properties");

    LOG.info("Yet Another Movie Jukebox {}", GitRepositoryState.getVersion());
    LOG.info("~~~ ~~~~~~~ ~~~~~ ~~~~~~~ {}", StringUtils.repeat("~", GitRepositoryState.getVersion().length()));
    LOG.info("https://github.com/YAMJ/yamj-v2");
    LOG.info("Copyright (c) 2004-2016 YAMJ Members");
    LOG.info("");
    LOG.info("This software is licensed under the GNU General Public License v3+");
    LOG.info("See this page: https://github.com/YAMJ/yamj-v2/wiki/License");
    LOG.info("");
    LOG.info(" Revision SHA: {} {}", GIT.getCommitId(), GIT.getDirty() ? "(Custom Build)" : "");
    LOG.info("  Commit Date: {}", GIT.getCommitTime());
    LOG.info("   Build Date: {}", GIT.getBuildTime());
    LOG.info("");
    LOG.info(" Java Version: {}", GitRepositoryState.getJavaVersion());
    LOG.info("");

    if (!SystemTools.validateInstallation()) {
        LOG.info("ABORTING.");
        return;/*from w w  w . j a v  a  2 s  .c o  m*/
    }

    String movieLibraryRoot = null;
    String jukeboxRoot = null;
    Map<String, String> cmdLineProps = new LinkedHashMap<>();

    try {
        for (int i = 0; i < args.length; i++) {
            String arg = args[i];
            if ("-v".equalsIgnoreCase(arg)) {
                // We've printed the version, so quit now
                return;
            } else if ("-t".equalsIgnoreCase(arg)) {
                String pin = args[++i];

                // load the apikeys.properties file
                if (!setPropertiesStreamName("./properties/apikeys.properties", Boolean.TRUE)) {
                    return;
                }

                // authorize to Trakt.TV
                TraktTV.getInstance().initialize().authorizeWithPin(pin);

                // We've authorized access to Trakt.TV, so quit now
                return;
            } else if ("-o".equalsIgnoreCase(arg)) {
                jukeboxRoot = args[++i];
                PropertiesUtil.setProperty("mjb.jukeboxRoot", jukeboxRoot);
            } else if ("-c".equalsIgnoreCase(arg)) {
                jukeboxClean = Boolean.TRUE;
                PropertiesUtil.setProperty("mjb.jukeboxClean", TRUE);
            } else if ("-k".equalsIgnoreCase(arg)) {
                setJukeboxPreserve(Boolean.TRUE);
            } else if ("-p".equalsIgnoreCase(arg)) {
                userPropertiesName = args[++i];
            } else if ("-i".equalsIgnoreCase(arg)) {
                skipIndexGeneration = Boolean.TRUE;
                PropertiesUtil.setProperty("mjb.skipIndexGeneration", TRUE);
            } else if ("-h".equalsIgnoreCase(arg)) {
                skipHtmlGeneration = Boolean.TRUE;
                PropertiesUtil.setProperty("mjb.skipHtmlGeneration", Boolean.TRUE);
            } else if ("-dump".equalsIgnoreCase(arg)) {
                dumpLibraryStructure = Boolean.TRUE;
            } else if ("-memory".equalsIgnoreCase(arg)) {
                showMemory = Boolean.TRUE;
                PropertiesUtil.setProperty("mjb.showMemory", Boolean.TRUE);
            } else if (arg.startsWith("-D")) {
                String propLine = arg.length() > 2 ? arg.substring(2) : args[++i];
                int propDiv = propLine.indexOf('=');
                if (-1 != propDiv) {
                    cmdLineProps.put(propLine.substring(0, propDiv), propLine.substring(propDiv + 1));
                }
            } else if (arg.startsWith("-")) {
                help();
                return;
            } else {
                movieLibraryRoot = args[i];
            }
        }
    } catch (Exception error) {
        LOG.error("Wrong arguments specified");
        help();
        return;
    }

    // Save the name of the properties file for use later
    setProperty("userPropertiesName", userPropertiesName);

    LOG.info("Processing started at {}", new Date());
    LOG.info("");

    // Load the moviejukebox-default.properties file
    if (!setPropertiesStreamName("./properties/moviejukebox-default.properties", Boolean.TRUE)) {
        return;
    }

    // Load the user properties file "moviejukebox.properties"
    // No need to abort if we don't find this file
    // Must be read before the skin, because this may contain an override skin
    setPropertiesStreamName(userPropertiesName, Boolean.FALSE);

    // Grab the skin from the command-line properties
    if (cmdLineProps.containsKey(SKIN_DIR)) {
        setProperty(SKIN_DIR, cmdLineProps.get(SKIN_DIR));
    }

    // Load the skin.properties file
    if (!setPropertiesStreamName(getProperty(SKIN_DIR, SKIN_DEFAULT) + "/skin.properties", Boolean.TRUE)) {
        return;
    }

    // Load the skin-user.properties file (ignore the error)
    setPropertiesStreamName(getProperty(SKIN_DIR, SKIN_DEFAULT) + "/skin-user.properties", Boolean.FALSE);

    // Load the overlay.properties file (ignore the error)
    String overlayRoot = getProperty("mjb.overlay.dir", Movie.UNKNOWN);
    overlayRoot = (PropertiesUtil.getBooleanProperty("mjb.overlay.skinroot", Boolean.TRUE)
            ? (getProperty(SKIN_DIR, SKIN_DEFAULT) + File.separator)
            : "") + (StringTools.isValidString(overlayRoot) ? (overlayRoot + File.separator) : "");
    setPropertiesStreamName(overlayRoot + "overlay.properties", Boolean.FALSE);

    // Load the apikeys.properties file
    if (!setPropertiesStreamName("./properties/apikeys.properties", Boolean.TRUE)) {
        return;
    }

    // This is needed to update the static reference for the API Keys in the pattern formatter
    // because the formatter is initialised before the properties files are read
    FilteringLayout.addApiKeys();

    // Load the rest of the command-line properties
    for (Map.Entry<String, String> propEntry : cmdLineProps.entrySet()) {
        setProperty(propEntry.getKey(), propEntry.getValue());
    }

    // Read the information about the skin
    SkinProperties.readSkinVersion();
    // Display the information about the skin
    SkinProperties.printSkinVersion();

    StringBuilder properties = new StringBuilder("{");
    for (Map.Entry<Object, Object> propEntry : PropertiesUtil.getEntrySet()) {
        properties.append(propEntry.getKey());
        properties.append("=");
        properties.append(propEntry.getValue());
        properties.append(",");
    }
    properties.replace(properties.length() - 1, properties.length(), "}");

    // Print out the properties to the log file.
    LOG.debug("Properties: {}", properties.toString());

    // Check for mjb.skipIndexGeneration and set as necessary
    // This duplicates the "-i" functionality, but allows you to have it in the property file
    skipIndexGeneration = PropertiesUtil.getBooleanProperty("mjb.skipIndexGeneration", Boolean.FALSE);

    if (PropertiesUtil.getBooleanProperty("mjb.people", Boolean.FALSE)) {
        peopleScan = Boolean.TRUE;
        peopleScrape = PropertiesUtil.getBooleanProperty("mjb.people.scrape", Boolean.TRUE);
        peopleMax = PropertiesUtil.getIntProperty("mjb.people.maxCount", 10);
        popularity = PropertiesUtil.getIntProperty("mjb.people.popularity", 5);

        // Issue 1947: Cast enhancement - option to save all related files to a specific folder
        peopleFolder = PropertiesUtil.getProperty("mjb.people.folder", "");
        if (isNotValidString(peopleFolder)) {
            peopleFolder = "";
        } else if (!peopleFolder.endsWith(File.separator)) {
            peopleFolder += File.separator;
        }
        StringTokenizer st = new StringTokenizer(
                PropertiesUtil.getProperty("photo.scanner.photoExtensions", "jpg,jpeg,gif,bmp,png"), ",;| ");
        while (st.hasMoreTokens()) {
            PHOTO_EXTENSIONS.add(st.nextToken());
        }
    }

    // Check for mjb.skipHtmlGeneration and set as necessary
    // This duplicates the "-h" functionality, but allows you to have it in the property file
    skipHtmlGeneration = PropertiesUtil.getBooleanProperty("mjb.skipHtmlGeneration", Boolean.FALSE);

    // Look for the parameter in the properties file if it's not been set on the command line
    // This way we don't overwrite the setting if it's not found and defaults to FALSE
    showMemory = PropertiesUtil.getBooleanProperty("mjb.showMemory", Boolean.FALSE);

    // This duplicates the "-c" functionality, but allows you to have it in the property file
    jukeboxClean = PropertiesUtil.getBooleanProperty("mjb.jukeboxClean", Boolean.FALSE);

    MovieFilenameScanner.setSkipKeywords(
            tokenizeToArray(getProperty("filename.scanner.skip.keywords", ""), ",;| "),
            PropertiesUtil.getBooleanProperty("filename.scanner.skip.caseSensitive", Boolean.TRUE));
    MovieFilenameScanner.setSkipRegexKeywords(
            tokenizeToArray(getProperty("filename.scanner.skip.keywords.regex", ""), ","),
            PropertiesUtil.getBooleanProperty("filename.scanner.skip.caseSensitive.regex", Boolean.TRUE));
    MovieFilenameScanner.setExtrasKeywords(
            tokenizeToArray(getProperty("filename.extras.keywords", "trailer,extra,bonus"), ",;| "));
    MovieFilenameScanner.setMovieVersionKeywords(tokenizeToArray(
            getProperty("filename.movie.versions.keywords", "remastered,directors cut,extended cut,final cut"),
            ",;|"));
    MovieFilenameScanner.setLanguageDetection(
            PropertiesUtil.getBooleanProperty("filename.scanner.language.detection", Boolean.TRUE));
    final KeywordMap languages = PropertiesUtil.getKeywordMap("filename.scanner.language.keywords", null);
    if (!languages.isEmpty()) {
        MovieFilenameScanner.clearLanguages();
        for (String lang : languages.getKeywords()) {
            String values = languages.get(lang);
            if (values != null) {
                MovieFilenameScanner.addLanguage(lang, values, values);
            } else {
                LOG.info("No values found for language code '{}'", lang);
            }
        }
    }
    final KeywordMap sourceKeywords = PropertiesUtil.getKeywordMap("filename.scanner.source.keywords",
            "HDTV,PDTV,DVDRip,DVDSCR,DSRip,CAM,R5,LINE,HD2DVD,DVD,DVD5,DVD9,HRHDTV,MVCD,VCD,TS,VHSRip,BluRay,HDDVD,D-THEATER,SDTV");
    MovieFilenameScanner.setSourceKeywords(sourceKeywords.getKeywords(), sourceKeywords);

    String temp = getProperty("sorting.strip.prefixes");
    if (temp != null) {
        StringTokenizer st = new StringTokenizer(temp, ",");
        while (st.hasMoreTokens()) {
            String token = st.nextToken().trim();
            if (token.startsWith("\"") && token.endsWith("\"")) {
                token = token.substring(1, token.length() - 1);
            }
            Movie.addSortIgnorePrefixes(token.toLowerCase());
        }
    }

    enableWatchScanner = PropertiesUtil.getBooleanProperty("watched.scanner.enable", Boolean.TRUE);
    enableWatchTraktTv = PropertiesUtil.getBooleanProperty("watched.trakttv.enable", Boolean.FALSE);
    enableCompleteMovies = PropertiesUtil.getBooleanProperty("complete.movies.enable", Boolean.TRUE);

    // Check to see if don't have a root, check the property file
    if (StringTools.isNotValidString(movieLibraryRoot)) {
        movieLibraryRoot = getProperty("mjb.libraryRoot");
        if (StringTools.isValidString(movieLibraryRoot)) {
            LOG.info("Got libraryRoot from properties file: {}", movieLibraryRoot);
        } else {
            LOG.error("No library root found!");
            help();
            return;
        }
    }

    if (jukeboxRoot == null) {
        jukeboxRoot = getProperty("mjb.jukeboxRoot");
        if (jukeboxRoot == null) {
            LOG.info("jukeboxRoot is null in properties file. Please fix this as it may cause errors.");
        } else {
            LOG.info("Got jukeboxRoot from properties file: {}", jukeboxRoot);
        }
    }

    File f = new File(movieLibraryRoot);
    if (f.exists() && f.isDirectory() && jukeboxRoot == null) {
        jukeboxRoot = movieLibraryRoot;
    }

    if (movieLibraryRoot == null) {
        help();
        return;
    }

    if (jukeboxRoot == null) {
        LOG.info("Wrong arguments specified: you must define the jukeboxRoot property (-o) !");
        help();
        return;
    }

    if (!f.exists()) {
        LOG.error("Directory or library configuration file '{}', not found.", movieLibraryRoot);
        return;
    }

    FileTools.initUnsafeChars();
    FileTools.initSubtitleExtensions();

    // make canonical names
    jukeboxRoot = FileTools.getCanonicalPath(jukeboxRoot);
    movieLibraryRoot = FileTools.getCanonicalPath(movieLibraryRoot);
    MovieJukebox ml = new MovieJukebox(movieLibraryRoot, jukeboxRoot);
    if (dumpLibraryStructure) {
        LOG.warn(
                "WARNING !!! A dump of your library directory structure will be generated for debug purpose. !!! Library won't be built or updated");
        ml.makeDumpStructure();
    } else {
        ml.generateLibrary();
    }

    // Now rename the log files
    renameLogFile();

    if (ScanningLimit.isLimitReached()) {
        LOG.warn("Scanning limit of {} was reached, please re-run to complete processing.",
                ScanningLimit.getLimit());
        System.exit(EXIT_SCAN_LIMIT);
    } else {
        System.exit(EXIT_NORMAL);
    }
}

From source file:edu.msu.cme.rdp.alignment.errorcheck.CompareErrorType.java

public static void main(String[] args) throws IOException {
    Options options = new Options();
    options.addOption("s", "stem", true, "Output stem (default <query_nucl.fasta>)");

    final SeqReader queryReader;
    final List<Sequence> refSeqList;
    final PrintStream alignOutStream;
    final CompareErrorType errorProcessor;
    Sequence seq;// w  ww.jav a2s.  co m
    Map<String, PAObject> matchMap = new HashMap();

    try {
        CommandLine line = new PosixParser().parse(options, args);

        String stem;

        args = line.getArgs();
        if (args.length != 2 && args.length != 3) {
            throw new Exception("Unexpected number of arguments");
        }

        File refFile = new File(args[0]);
        File queryFile = new File(args[1]);

        if (line.hasOption("stem")) {
            stem = line.getOptionValue("stem");
        } else {
            stem = queryFile.getName();
        }

        File alignOutFile = new File(stem + "_alignments.txt");
        File mismatchOutFile = new File(stem + "_mismatches.txt");
        File indelOutFile = new File(stem + "_indels.txt");
        File qualOutFile = null;

        refSeqList = SequenceReader.readFully(refFile);
        if (args.length == 3) {
            queryReader = new QSeqReader(queryFile, new File(args[2]));
        } else {
            queryReader = new SequenceReader(queryFile);
        }

        seq = queryReader.readNextSequence();
        if (seq instanceof QSequence) {
            qualOutFile = new File(stem + "_qual.txt");
        }

        errorProcessor = new CompareErrorType(mismatchOutFile, indelOutFile, qualOutFile);
        alignOutStream = new PrintStream(alignOutFile);

        System.err.println("Starting CompareErrorType");
        System.err.println("*  Time:              " + new Date());
        System.err.println("*  Reference File:    " + refFile);
        System.err.println("*  Query File:        " + queryFile);
        if (args.length == 3) {
            System.err.println("*  Qual File:         " + args[2]);
        }
        System.err.println("*  Query format:      " + queryReader.getFormat());
        System.err.println("*  Alignment Output:  " + alignOutFile);
        System.err.println("*  Mismatches Output: " + mismatchOutFile);
        System.err.println("*  Alignment Output:  " + indelOutFile);
        if (qualOutFile != null) {
            System.err.println("*  Quality Output:    " + qualOutFile);
        }

    } catch (Exception e) {
        new HelpFormatter().printHelp(
                "CompareErrorType [options] <ref_nucl> (<query_nucl> | <query_nucl.fasta> <query_nucl.qual>)",
                options);
        System.err.println("ERROR: " + e.getMessage());
        throw new RuntimeException(e);
        //System.exit(1);
        //return;
    }

    //ScoringMatrix scoringMatrix = ScoringMatrix.getDefaultNuclMatrix();
    // use a simple scoring function, match score 0, mismatch -1, gap opening -1, gap extension -1.
    ScoringMatrix scoringMatrix = new ScoringMatrix(
            ScoringMatrix.class.getResourceAsStream("/data/simple_scoringmatrix.txt"), -1, -1);

    do {
        try {
            PairwiseAlignment bestResult = null;
            Sequence bestSeq = null;
            boolean bestReversed = false;
            String querySeqStr = seq.getSeqString().toLowerCase();
            String reversedQuery = IUBUtilities.reverseComplement(querySeqStr);
            PAObject bestMatch = null;

            //checking if sequence has been seen before
            if (matchMap.containsKey(seq.getSeqString())) {
                bestMatch = matchMap.get(seq.getSeqString());
            } else {
                for (Sequence refSeq : refSeqList) {
                    String refSeqStr = refSeq.getSeqString().toLowerCase();
                    PairwiseAlignment result = PairwiseAligner.align(refSeqStr, querySeqStr, scoringMatrix,
                            AlignmentMode.global);
                    PairwiseAlignment reversedResult = PairwiseAligner.align(refSeqStr,
                            IUBUtilities.reverseComplement(querySeqStr), scoringMatrix, AlignmentMode.global);

                    PairwiseAlignment currBest = (result.getScore() > reversedResult.getScore()) ? result
                            : reversedResult;

                    if (bestResult == null || currBest.getScore() > bestResult.getScore()) {
                        bestResult = currBest;
                        bestSeq = refSeq;
                        if (currBest == reversedResult) {
                            bestReversed = true;
                        } else {
                            bestReversed = false;
                        }

                    }

                    //Since this is a new sequence, make a new PAObject to put into the map to compare against later
                    bestMatch = new PAObject(bestResult, bestReversed, bestSeq);
                    matchMap.put(seq.getSeqString(), bestMatch);
                }
            }
            int refStart = bestMatch.getPA().getStarti();
            int refEnd = bestMatch.getPA().getEndi();
            bestSeq = bestMatch.getRefSeq();
            bestReversed = bestMatch.getReversed();
            bestResult = bestMatch.getPA();

            //output information
            alignOutStream.println(">\t" + seq.getSeqName() + "\t" + bestSeq.getSeqName() + "\t"
                    + seq.getSeqString().length() + "\t" + refStart + "\t" + refEnd + "\t"
                    + bestResult.getScore() + "\t" + ((bestReversed) ? "\treversed" : ""));
            alignOutStream.println(bestResult.getAlignedSeqj() + "\n");
            alignOutStream.println(bestResult.getAlignedSeqi() + "\n");

            //seqi is reference seq, seqj is the refseq
            errorProcessor.processSequence(seq, bestResult.getAlignedSeqj(), bestSeq.getSeqName(),
                    bestResult.getAlignedSeqi(), refStart, bestReversed);

        } catch (Exception e) {
            throw new RuntimeException("Failed while processing seq " + seq.getSeqName(), e);
        }
    } while ((seq = queryReader.readNextSequence()) != null);
    queryReader.close();
    alignOutStream.close();
    errorProcessor.close();
}

From source file:com.github.wshackle.java4cpp.J4CppMain.java

public static void main(String[] args) throws IOException, ClassNotFoundException {
    main_completed = false;/* w w  w  .j a  va 2  s.c  om*/

    Options options = new Options();
    options.addOption(Option.builder("?").desc("Print this message").longOpt("help").build());
    options.addOption(Option.builder("n").hasArg().desc("C++ namespace for newly generated classes.")
            .longOpt("namespace").build());
    options.addOption(
            Option.builder("c").hasArgs().desc("Single Java class to extract.").longOpt("classes").build());
    options.addOption(
            Option.builder("p").hasArgs().desc("Java Package prefix to extract").longOpt("packages").build());
    options.addOption(Option.builder("o").hasArg().desc("Output C++ source file.").longOpt("output").build());
    options.addOption(Option.builder("j").hasArg().desc("Input jar file").longOpt("jar").build());
    options.addOption(Option.builder("h").hasArg().desc("Output C++ header file.").longOpt("header").build());
    options.addOption(Option.builder("l").hasArg()
            .desc("Maximum limit on classes to extract from jars.[default=200]").longOpt("limit").build());
    options.addOption(Option.builder("v").desc("enable verbose output").longOpt("verbose").build());
    options.addOption(Option.builder().hasArg().desc("Classes per output file.[default=10]")
            .longOpt(CLASSESPEROUTPUT).build());
    options.addOption(Option.builder().hasArgs().desc(
            "Comma seperated list of nativeclass=javaclass native where nativeclass will be generated as an extension/implementation of the java class.")
            .longOpt("natives").build());
    options.addOption(Option.builder().hasArg()
            .desc("library name for System.loadLibrary(...) for native extension classes")
            .longOpt("loadlibname").build());
    String output = null;
    String header = null;
    String jar = null;
    Set<String> classnamesToFind = null;
    Set<String> packageprefixes = null;
    String loadlibname = null;

    Map<String, String> nativesNameMap = null;
    Map<String, Class> nativesClassMap = null;
    int limit = DEFAULT_LIMIT;
    int classes_per_file = 10;
    List<Class> classes = new ArrayList<>();

    String limitstring = Integer.toString(limit);

    try {
        // parse the command line arguments
        System.out.println("args = " + Arrays.toString(args));
        CommandLine line = new DefaultParser().parse(options, args);
        loadlibname = line.getOptionValue("loadlibname");
        verbose = line.hasOption("verbose");
        if (line.hasOption(CLASSESPEROUTPUT)) {
            String cpoStr = line.getOptionValue(CLASSESPEROUTPUT);
            try {
                int cpoI = Integer.valueOf(cpoStr);
                classes_per_file = cpoI;
            } catch (Exception e) {
                System.err.println("Option for " + CLASSESPEROUTPUT + "=\"" + cpoStr + "\"");
                printHelpAndExit(options, args);
            }
        }

        if (line.hasOption("natives")) {
            String natives[] = line.getOptionValues("natives");
            if (verbose) {
                System.out.println("natives = " + Arrays.toString(natives));
            }
            nativesNameMap = new HashMap<>();
            nativesClassMap = new HashMap<>();
            for (int i = 0; i < natives.length; i++) {
                int eq_index = natives[i].indexOf('=');
                String nativeClassName = natives[i].substring(0, eq_index).trim();
                String javaClassName = natives[i].substring(eq_index + 1).trim();
                Class javaClass = null;
                try {
                    javaClass = Class.forName(javaClassName);
                } catch (ClassNotFoundException e) {
                    //e.printStackTrace();
                    System.err.println("Class for " + javaClassName
                            + " not found. (It may be found later in jar if specified.)");
                }
                nativesNameMap.put(javaClassName, nativeClassName);
                if (javaClass != null) {
                    nativesClassMap.put(nativeClassName, javaClass);
                    if (!classes.contains(javaClass)) {
                        classes.add(javaClass);
                    }
                }
            }
        }
        //            // validate that block-size has been set
        //            if (line.hasOption("block-size")) {
        //                // print the value of block-size
        //                if(verbose) System.out.println(line.getOptionValue("block-size"));
        //            }
        jar = line.getOptionValue("jar", jar);
        if (verbose) {
            System.out.println("jar = " + jar);
        }
        if (null != jar) {
            if (jar.startsWith("~/")) {
                jar = new File(new File(getHomeDir()), jar.substring(2)).getCanonicalPath();
            }
            if (jar.startsWith("./")) {
                jar = new File(new File(getCurrentDir()), jar.substring(2)).getCanonicalPath();
            }
            if (jar.startsWith("../")) {
                jar = new File(new File(getCurrentDir()).getParentFile(), jar.substring(3)).getCanonicalPath();
            }
        }
        if (line.hasOption("classes")) {
            classnamesToFind = new HashSet<String>();
            String classStrings[] = line.getOptionValues("classes");
            if (verbose) {
                System.out.println("classStrings = " + Arrays.toString(classStrings));
            }
            classnamesToFind.addAll(Arrays.asList(classStrings));
            if (verbose) {
                System.out.println("classnamesToFind = " + classnamesToFind);
            }
        }
        //                if (!line.hasOption("namespace")) {
        //                    if (classname != null && classname.length() > 0) {
        //                        namespace = classname.toLowerCase().replace(".", "_");
        //                    } else if (jar != null && jar.length() > 0) {
        //                        int lastSep = jar.lastIndexOf(File.separator);
        //                        int start = Math.max(0, lastSep + 1);
        //                        int period = jar.indexOf('.', start + 1);
        //                        int end = Math.max(start + 1, period);
        //                        namespace = jar.substring(start, end).toLowerCase();
        //                        namespace = namespace.replace(" ", "_");
        //                        if (namespace.indexOf("-") > 0) {
        //                            namespace = namespace.substring(0, namespace.indexOf("-"));
        //                        }
        //                    }
        //                }

        namespace = line.getOptionValue("namespace", namespace);
        if (verbose) {
            System.out.println("namespace = " + namespace);
        }
        if (null != namespace) {
            output = namespace + ".cpp";
        }
        output = line.getOptionValue("output", output);
        if (verbose) {
            System.out.println("output = " + output);
        }
        if (null != output) {
            if (output.startsWith("~/")) {
                output = System.getProperty("user.home") + output.substring(1);
            }
            header = output.substring(0, output.lastIndexOf('.')) + ".h";
        } else {
            output = "out.cpp";
        }
        header = line.getOptionValue("header", header);
        if (verbose) {
            System.out.println("header = " + header);
        }
        if (null != header) {
            if (header.startsWith("~/")) {
                header = System.getProperty("user.home") + header.substring(1);
            }
        } else {
            header = "out.h";
        }

        if (line.hasOption("packages")) {
            packageprefixes = new HashSet<String>();
            packageprefixes.addAll(Arrays.asList(line.getOptionValues("packages")));
        }
        if (line.hasOption("limit")) {
            limitstring = line.getOptionValue("limit", Integer.toString(DEFAULT_LIMIT));
            limit = Integer.valueOf(limitstring);
        }
        if (line.hasOption("help")) {
            printHelpAndExit(options, args);
        }
    } catch (ParseException exp) {
        if (verbose) {
            System.out.println("Unexpected exception:" + exp.getMessage());
        }
        printHelpAndExit(options, args);
    }

    Set<Class> excludedClasses = new HashSet<>();
    Set<String> foundClassNames = new HashSet<>();
    excludedClasses.add(Object.class);
    excludedClasses.add(String.class);
    excludedClasses.add(void.class);
    excludedClasses.add(Void.class);
    excludedClasses.add(Class.class);
    excludedClasses.add(Enum.class);
    Set<String> packagesSet = new TreeSet<>();
    List<URL> urlsList = new ArrayList<>();
    String cp = System.getProperty("java.class.path");
    if (verbose) {
        System.out.println("System.getProperty(\"java.class.path\") = " + cp);
    }
    if (null != cp) {
        for (String cpe : cp.split(File.pathSeparator)) {
            if (verbose) {
                System.out.println("class path element = " + cpe);
            }
            File f = new File(cpe);
            if (f.isDirectory()) {
                urlsList.add(new URL("file:" + f.getCanonicalPath() + File.separator));
            } else if (cpe.endsWith(".jar")) {
                urlsList.add(new URL("jar:file:" + f.getCanonicalPath() + "!/"));
            }
        }
    }
    cp = System.getenv("CLASSPATH");
    if (verbose) {
        System.out.println("System.getenv(\"CLASSPATH\") = " + cp);
    }
    if (null != cp) {
        for (String cpe : cp.split(File.pathSeparator)) {
            if (verbose) {
                System.out.println("class path element = " + cpe);
            }
            File f = new File(cpe);
            if (f.isDirectory()) {
                urlsList.add(new URL("file:" + f.getCanonicalPath() + File.separator));
            } else if (cpe.endsWith(".jar")) {
                urlsList.add(new URL("jar:file:" + f.getCanonicalPath() + "!/"));
            }
        }
    }
    if (verbose) {
        System.out.println("urlsList = " + urlsList);
    }

    if (null != jar && jar.length() > 0) {
        Path jarPath = FileSystems.getDefault().getPath(jar);
        ZipInputStream zip = new ZipInputStream(Files.newInputStream(jarPath, StandardOpenOption.READ));

        URL jarUrl = new URL("jar:file:" + jarPath.toFile().getCanonicalPath() + "!/");
        urlsList.add(jarUrl);
        URL[] urls = urlsList.toArray(new URL[urlsList.size()]);
        if (verbose) {
            System.out.println("urls = " + Arrays.toString(urls));
        }
        URLClassLoader cl = URLClassLoader.newInstance(urls);
        for (ZipEntry entry = zip.getNextEntry(); entry != null; entry = zip.getNextEntry()) {
            // This ZipEntry represents a class. Now, what class does it represent?
            String entryName = entry.getName();
            if (verbose) {
                System.out.println("entryName = " + entryName);
            }

            if (!entry.isDirectory() && entryName.endsWith(".class")) {

                if (entryName.indexOf('$') >= 0) {
                    continue;
                }
                String classFileName = entry.getName().replace('/', '.');
                String className = classFileName.substring(0, classFileName.length() - ".class".length());
                if (classnamesToFind != null && classnamesToFind.size() > 0
                        && !classnamesToFind.contains(className)) {
                    if (verbose) {
                        System.out.println("skipping className=" + className + " because it does not found in="
                                + classnamesToFind);
                    }
                    continue;
                }
                try {
                    Class clss = cl.loadClass(className);
                    if (null != nativesClassMap && null != nativesNameMap
                            && nativesNameMap.containsKey(className)) {
                        nativesClassMap.put(nativesNameMap.get(className), clss);
                        if (!classes.contains(clss)) {
                            classes.add(clss);
                        }
                    }
                    if (packageprefixes != null && packageprefixes.size() > 0) {
                        if (null == clss.getPackage()) {
                            continue;
                        }
                        final String pkgName = clss.getPackage().getName();
                        boolean matchFound = false;
                        for (String prefix : packageprefixes) {
                            if (pkgName.startsWith(prefix)) {
                                matchFound = true;
                                break;
                            }
                        }
                        if (!matchFound) {
                            continue;
                        }
                    }
                    Package p = clss.getPackage();
                    if (null != p) {
                        packagesSet.add(clss.getPackage().getName());
                    }
                    if (!classes.contains(clss) && isAddableClass(clss, excludedClasses)) {
                        if (null != classnamesToFind && classnamesToFind.contains(className)
                                && !foundClassNames.contains(className)) {
                            foundClassNames.add(className);
                            if (verbose) {
                                System.out.println("foundClassNames = " + foundClassNames);
                            }
                        }
                        //                        if(verbose) System.out.println("clss = " + clss);
                        classes.add(clss);
                        //                        Class superClass = clss.getSuperclass();
                        //                        while (null != superClass
                        //                                && !classes.contains(superClass)
                        //                                && isAddableClass(superClass, excludedClasses)) {
                        //                            classes.add(superClass);
                        //                            superClass = superClass.getSuperclass();
                        //                        }
                    }
                } catch (ClassNotFoundException | NoClassDefFoundError ex) {
                    System.err.println(
                            "Caught " + ex.getClass().getName() + ":" + ex.getMessage() + " for className="
                                    + className + ", entryName=" + entryName + ", jarPath=" + jarPath);
                }
            }
        }
    }
    if (null != classnamesToFind) {
        if (verbose) {
            System.out.println("Checking classnames arguments");
        }
        for (String classname : classnamesToFind) {
            if (verbose) {
                System.out.println("classname = " + classname);
            }
            if (foundClassNames.contains(classname)) {
                if (verbose) {
                    System.out.println("foundClassNames.contains(" + classname + ")");
                }
                continue;
            }
            try {
                if (classes.contains(Class.forName(classname))) {
                    if (verbose) {
                        System.out.println("Classes list already contains:  " + classname);
                    }
                    continue;
                }
            } catch (Exception e) {

            }

            if (null != classname && classname.length() > 0) {
                urlsList.add(new URL("file://" + System.getProperty("user.dir") + "/"));

                URL[] urls = urlsList.toArray(new URL[urlsList.size()]);
                if (verbose) {
                    System.out.println("urls = " + Arrays.toString(urls));
                }
                URLClassLoader cl = URLClassLoader.newInstance(urls);
                Class c = null;
                try {
                    c = cl.loadClass(classname);
                } catch (ClassNotFoundException e) {
                    System.err.println("Class " + classname + " not found ");
                }
                if (verbose) {
                    System.out.println("c = " + c);
                }
                if (null == c) {
                    try {
                        c = ClassLoader.getSystemClassLoader().loadClass(classname);
                    } catch (ClassNotFoundException e) {
                        if (verbose) {
                            System.out.println("System ClassLoader failed to find " + classname);
                        }
                    }
                }
                if (null != c) {
                    classes.add(c);
                } else {
                    System.err.println("Class " + classname + " not found");
                }
            }
        }
        if (verbose) {
            System.out.println("Finished checking classnames arguments");
        }
    }
    if (classes == null || classes.size() < 1) {
        if (null == nativesClassMap || nativesClassMap.keySet().size() < 1) {
            System.err.println("No Classes specified or found.");
            System.exit(1);
        }
    }
    if (verbose) {
        System.out.println("Classes found = " + classes.size());
    }
    if (classes.size() > limit) {
        System.err.println("limit=" + limit);
        System.err.println(
                "Too many classes please use -c or -p options to limit classes or -l to increase limit.");
        if (verbose) {
            System.out.println("packagesSet = " + packagesSet);
        }
        System.exit(1);
    }
    List<Class> newClasses = new ArrayList<Class>();
    for (Class clss : classes) {
        Class superClass = clss.getSuperclass();
        while (null != superClass && !classes.contains(superClass) && !newClasses.contains(superClass)
                && isAddableClass(superClass, excludedClasses)) {
            newClasses.add(superClass);
            superClass = superClass.getSuperclass();
        }
        try {
            Field fa[] = clss.getDeclaredFields();
            for (Field f : fa) {
                if (Modifier.isPublic(f.getModifiers())) {
                    Class fClass = f.getType();
                    if (!classes.contains(fClass) && !newClasses.contains(fClass)
                            && isAddableClass(fClass, excludedClasses)) {
                        newClasses.add(fClass);
                    }
                }
            }
        } catch (NoClassDefFoundError e) {
            e.printStackTrace();
        }
        for (Method m : clss.getDeclaredMethods()) {
            if (m.isSynthetic()) {
                continue;
            }
            if (!Modifier.isPublic(m.getModifiers()) || Modifier.isAbstract(m.getModifiers())) {
                continue;
            }
            Class retType = m.getReturnType();
            if (verbose) {
                System.out.println("Checking dependancies for Method = " + m);
            }
            if (!classes.contains(retType) && !newClasses.contains(retType)
                    && isAddableClass(retType, excludedClasses)) {
                newClasses.add(retType);
                superClass = retType.getSuperclass();
                while (null != superClass && !classes.contains(superClass) && !newClasses.contains(superClass)
                        && isAddableClass(superClass, excludedClasses)) {
                    newClasses.add(superClass);
                    superClass = superClass.getSuperclass();
                }
            }
            for (Class paramType : m.getParameterTypes()) {
                if (!classes.contains(paramType) && !newClasses.contains(paramType)
                        && isAddableClass(paramType, excludedClasses)) {
                    newClasses.add(paramType);
                    superClass = paramType.getSuperclass();
                    while (null != superClass && !classes.contains(superClass)
                            && !newClasses.contains(superClass) && !excludedClasses.contains(superClass)) {
                        newClasses.add(superClass);
                        superClass = superClass.getSuperclass();
                    }
                }
            }
        }
    }
    if (null != nativesClassMap) {
        for (Class clss : nativesClassMap.values()) {
            if (null != clss) {
                Class superClass = clss.getSuperclass();
                while (null != superClass && !classes.contains(superClass) && !newClasses.contains(superClass)
                        && !excludedClasses.contains(superClass)) {
                    newClasses.add(superClass);
                    superClass = superClass.getSuperclass();
                }
            }
        }
    }
    if (verbose) {
        System.out.println("Dependency classes needed = " + newClasses.size());
    }
    classes.addAll(newClasses);
    List<Class> newOrderClasses = new ArrayList<>();
    for (Class clss : classes) {
        if (newOrderClasses.contains(clss)) {
            continue;
        }
        Class superClass = clss.getSuperclass();
        Stack<Class> stack = new Stack<>();
        while (null != superClass && !newOrderClasses.contains(superClass)
                && !superClass.equals(java.lang.Object.class)) {
            stack.push(superClass);
            superClass = superClass.getSuperclass();
        }
        while (!stack.empty()) {
            newOrderClasses.add(stack.pop());
        }
        newOrderClasses.add(clss);
    }
    classes = newOrderClasses;
    if (verbose) {
        System.out.println("Total number of classes = " + classes.size());
        System.out.println("classes = " + classes);
    }

    String forward_header = header.substring(0, header.lastIndexOf('.')) + "_fwd.h";
    Map<String, String> map = new HashMap<>();
    map.put(JAR, jar != null ? jar : "");
    map.put("%CLASSPATH_PREFIX%",
            getCurrentDir() + ((jar != null)
                    ? (File.pathSeparator + ((new File(jar).getCanonicalPath()).replace("\\", "\\\\")))
                    : ""));
    map.put("%FORWARD_HEADER%", forward_header);
    map.put("%HEADER%", header);
    map.put("%PATH_SEPERATOR%", File.pathSeparator);
    String tabs = "";
    String headerDefine = forward_header.substring(Math.max(0, forward_header.indexOf(File.separator)))
            .replace(".", "_");
    map.put(HEADER_DEFINE, headerDefine);
    map.put(NAMESPACE, namespace);
    if (null != nativesClassMap) {
        for (Entry<String, Class> e : nativesClassMap.entrySet()) {
            final Class javaClass = e.getValue();
            final String nativeClassName = e.getKey();
            try (PrintWriter pw = new PrintWriter(new FileWriter(nativeClassName + ".java"))) {
                if (javaClass.isInterface()) {
                    pw.println("public class " + nativeClassName + " implements " + javaClass.getCanonicalName()
                            + ", AutoCloseable{");
                } else {
                    pw.println("public class " + nativeClassName + " extends " + javaClass.getCanonicalName()
                            + " implements AutoCloseable{");
                }
                if (null != loadlibname && loadlibname.length() > 0) {
                    pw.println(TAB_STRING + "static {");
                    pw.println(TAB_STRING + TAB_STRING + "System.loadLibrary(\"" + loadlibname + "\");");
                    pw.println(TAB_STRING + "}");
                    pw.println();
                }
                pw.println(TAB_STRING + "public " + nativeClassName + "() {");
                pw.println(TAB_STRING + "}");
                pw.println();
                pw.println(TAB_STRING + "private long nativeAddress=0;");
                pw.println(TAB_STRING + "private boolean nativeDeleteOnClose=false;");
                pw.println();

                pw.println(TAB_STRING + "protected " + nativeClassName + "(final long nativeAddress) {");
                pw.println(TAB_STRING + TAB_STRING + "this.nativeAddress = nativeAddress;");
                pw.println(TAB_STRING + "}");

                pw.println(TAB_STRING + "private native void nativeDelete();");
                pw.println();
                pw.println(TAB_STRING + "@Override");
                pw.println(TAB_STRING + "public synchronized void  close() {");
                //                        pw.println(TAB_STRING + TAB_STRING + "if(nativeAddress != 0 && nativeDeleteOnClose) {");
                pw.println(TAB_STRING + TAB_STRING + "nativeDelete();");
                //                        pw.println(TAB_STRING + TAB_STRING + "}");
                //                        pw.println(TAB_STRING + TAB_STRING + "nativeAddress=0;");
                //                        pw.println(TAB_STRING + TAB_STRING + "nativeDeleteOnClose=false;");
                pw.println(TAB_STRING + "}");

                pw.println();
                pw.println(TAB_STRING + "protected void finalizer() {");
                pw.println(TAB_STRING + TAB_STRING + "close();");
                pw.println(TAB_STRING + "}");

                pw.println();
                Method ma[] = javaClass.getDeclaredMethods();
                for (Method m : ma) {
                    int modifiers = m.getModifiers();
                    if (Modifier.isAbstract(modifiers) && Modifier.isPublic(modifiers)
                            && !Modifier.isStatic(modifiers)
                            //                                && !m.isDefault()
                            && !m.isSynthetic()) {
                        pw.println();
                        pw.println(TAB_STRING + "@Override");
                        String params = "";
                        for (int i = 0; i < m.getParameterTypes().length; i++) {
                            params += m.getParameterTypes()[i].getCanonicalName() + " param" + i;
                            if (i < m.getParameterTypes().length - 1) {
                                params += ",";
                            }
                        }
                        pw.println(TAB_STRING + "native public " + m.getReturnType().getCanonicalName() + " "
                                + m.getName() + "(" + params + ");");
                        //                                    + IntStream.range(0, m.getParameterTypes().length)
                        //                                    .mapToObj(i -> m.getParameterTypes()[i].getCanonicalName() + " param" + i)
                        //                                    .collect(Collectors.joining(",")) + ");");
                    }
                }
                pw.println("}");
            }
        }
    }
    try (PrintWriter pw = new PrintWriter(new FileWriter(forward_header))) {
        tabs = "";
        processTemplate(pw, map, "header_fwd_template_start.h", tabs);
        Class lastClass = null;
        for (int class_index = 0; class_index < classes.size(); class_index++) {
            Class clss = classes.get(class_index);
            String clssOnlyName = getCppClassName(clss);
            tabs = openClassNamespace(clss, pw, tabs, lastClass);
            tabs += TAB_STRING;
            pw.println(tabs + "class " + clssOnlyName + ";");
            tabs = tabs.substring(0, tabs.length() - 1);
            Class nextClass = (class_index < (classes.size() - 1)) ? classes.get(class_index + 1) : null;
            tabs = closeClassNamespace(clss, pw, tabs, nextClass);
            lastClass = clss;
        }
        processTemplate(pw, map, "header_fwd_template_end.h", tabs);
    }
    headerDefine = header.substring(Math.max(0, header.indexOf(File.separator))).replace(".", "_");
    map.put(HEADER_DEFINE, headerDefine);
    map.put(NAMESPACE, namespace);
    if (classes_per_file < 1) {
        classes_per_file = classes.size();
    }
    final int num_class_segments = (classes.size() > 1)
            ? ((classes.size() + classes_per_file - 1) / classes_per_file)
            : 1;
    String fmt = "%d";
    if (num_class_segments > 10) {
        fmt = "%02d";
    }
    if (num_class_segments > 100) {
        fmt = "%03d";
    }
    String header_file_base = header;
    if (header_file_base.endsWith(".h")) {
        header_file_base = header_file_base.substring(0, header_file_base.length() - 2);
    } else if (header_file_base.endsWith(".hh")) {
        header_file_base = header_file_base.substring(0, header_file_base.length() - 3);
    } else if (header_file_base.endsWith(".hpp")) {
        header_file_base = header_file_base.substring(0, header_file_base.length() - 4);
    }
    try (PrintWriter pw = new PrintWriter(new FileWriter(header))) {
        tabs = "";
        processTemplate(pw, map, HEADER_TEMPLATE_STARTH, tabs);
        for (int segment_index = 0; segment_index < num_class_segments; segment_index++) {
            String header_segment_file = header_file_base + String.format(fmt, segment_index) + ".h";
            pw.println("#include \"" + header_segment_file + "\"");
        }
        if (null != nativesClassMap) {
            tabs = TAB_STRING;
            for (Entry<String, Class> e : nativesClassMap.entrySet()) {
                final Class javaClass = e.getValue();
                final String nativeClassName = e.getKey();
                pw.println();
                pw.println(tabs + "class " + nativeClassName + "Context;");
                pw.println();
                map.put(CLASS_NAME, nativeClassName);
                map.put("%BASE_CLASS_FULL_NAME%",
                        "::" + namespace + "::" + getModifiedClassName(javaClass).replace(".", "::"));
                map.put(OBJECT_CLASS_FULL_NAME, "::" + namespace + "::java::lang::Object");
                processTemplate(pw, map, HEADER_CLASS_STARTH, tabs);
                tabs += TAB_STRING;
                pw.println(tabs + nativeClassName + "Context *context;");
                pw.println(tabs + nativeClassName + "();");
                pw.println(tabs + "~" + nativeClassName + "();");
                Method methods[] = javaClass.getDeclaredMethods();
                for (int j = 0; j < methods.length; j++) {
                    Method method = methods[j];
                    int modifiers = method.getModifiers();
                    if (!Modifier.isPublic(modifiers)) {
                        continue;
                    }
                    if (Modifier.isAbstract(modifiers) && Modifier.isPublic(modifiers)
                            && !Modifier.isStatic(modifiers)
                            //                                && !method.isDefault()
                            && !method.isSynthetic()) {
                        pw.println(tabs + getNativeMethodCppDeclaration(method, javaClass));
                    }
                }
                pw.println(tabs + "void initContext(" + nativeClassName + "Context *ctx,bool isref);");
                pw.println(tabs + "void deleteContext();");
                tabs = tabs.substring(TAB_STRING.length());
                pw.println(tabs + "}; // end class " + nativeClassName);
            }
        }
        tabs = "";
        processTemplate(pw, map, HEADER_TEMPLATE_ENDH, tabs);
    }
    for (int segment_index = 0; segment_index < num_class_segments; segment_index++) {
        String header_segment_file = header_file_base + String.format(fmt, segment_index) + ".h";
        try (PrintWriter pw = new PrintWriter(new FileWriter(header_segment_file))) {
            tabs = "";
            //processTemplate(pw, map, HEADER_TEMPLATE_STARTH, tabs);
            pw.println("// Never include this file (" + header_segment_file + ") directly. include " + header
                    + " instead.");
            pw.println();
            Class lastClass = null;
            final int start_segment_index = segment_index * classes_per_file;
            final int end_segment_index = Math.min(segment_index * classes_per_file + classes_per_file,
                    classes.size());
            List<Class> classesSegList = classes.subList(start_segment_index, end_segment_index);
            pw.println();
            pw.println(tabs + "// start_segment_index = " + start_segment_index);
            pw.println(tabs + "// start_segment_index = " + end_segment_index);
            pw.println(tabs + "// segment_index = " + segment_index);
            pw.println(tabs + "// classesSegList=" + classesSegList);
            pw.println();
            for (int class_index = 0; class_index < classesSegList.size(); class_index++) {
                Class clss = classesSegList.get(class_index);
                pw.println();
                pw.println(tabs + "// class_index = " + class_index + " clss=" + clss);
                pw.println();
                String clssName = clss.getCanonicalName();
                tabs = openClassNamespace(clss, pw, tabs, lastClass);
                String clssOnlyName = getCppClassName(clss);
                map.put(CLASS_NAME, clssOnlyName);
                map.put("%BASE_CLASS_FULL_NAME%", classToCppBase(clss));
                map.put(OBJECT_CLASS_FULL_NAME, getCppRelativeName(Object.class, clss));
                tabs += TAB_STRING;
                processTemplate(pw, map, HEADER_CLASS_STARTH, tabs);
                tabs += TAB_STRING;

                Constructor constructors[] = clss.getDeclaredConstructors();
                if (!hasNoArgConstructor(constructors)) {
                    if (Modifier.isAbstract(clss.getModifiers()) || clss.isInterface()) {
                        pw.println(tabs + "protected:");
                        pw.println(tabs + clssOnlyName + "() {};");
                        pw.println(tabs + "public:");
                    } else {
                        if (constructors.length > 0) {
                            pw.println(tabs + "protected:");
                        }
                        pw.println(tabs + clssOnlyName + "();");
                        if (constructors.length > 0) {
                            pw.println(tabs + "public:");
                        }
                    }
                }
                for (Constructor c : constructors) {
                    if (c.getParameterTypes().length == 0 && Modifier.isProtected(c.getModifiers())) {
                        pw.println(tabs + "protected:");
                        pw.println(tabs + clssOnlyName + "();");
                        pw.println(tabs + "public:");
                    }
                    if (checkConstructor(c, clss, classes)) {
                        continue;
                    }

                    if (c.getParameterTypes().length == 1 && clss.isAssignableFrom(c.getParameterTypes()[0])) {
                        continue;
                    }
                    if (!Modifier.isPublic(c.getModifiers())) {
                        continue;
                    }
                    if (c.getParameterTypes().length == 1) {
                        if (c.getParameterTypes()[0].getName().equals(clss.getName())) {
                            //                                    if(verbose) System.out.println("skipping constructor.");
                            continue;
                        }
                    }

                    if (!checkParameters(c.getParameterTypes(), classes)) {
                        continue;
                    }
                    pw.println(
                            tabs + clssOnlyName + getCppParamDeclarations(c.getParameterTypes(), clss) + ";");
                    if (isConstructorToMakeEasy(c, clss)) {
                        pw.println(tabs + clssOnlyName
                                + getEasyCallCppParamDeclarations(c.getParameterTypes(), clss) + ";");
                    }
                }

                pw.println(tabs + "~" + clssOnlyName + "();");
                Field fa[] = clss.getDeclaredFields();
                for (int findex = 0; findex < fa.length; findex++) {
                    Field field = fa[findex];
                    if (addGetterMethod(field, clss, classes)) {
                        pw.println(tabs + getCppFieldGetterDeclaration(field, clss));
                    }
                    if (addSetterMethod(field, clss, classes)) {
                        pw.println(tabs + getCppFieldSetterDeclaration(field, clss));
                    }
                }
                Method methods[] = clss.getDeclaredMethods();
                for (int j = 0; j < methods.length; j++) {
                    Method method = methods[j];
                    if (!checkMethod(method, classes)) {
                        continue;
                    }
                    if ((method.getModifiers() & Modifier.PUBLIC) == Modifier.PUBLIC) {
                        pw.println(tabs + getCppDeclaration(method, clss));
                    }
                    if (isArrayStringMethod(method)) {
                        pw.println(tabs + getCppModifiers(method.getModifiers())
                                + getCppType(method.getReturnType(), clss) + " " + fixMethodName(method)
                                + "(int argc,const char **argv);");
                    }
                    if (isMethodToMakeEasy(method)) {
                        pw.println(tabs + getEasyCallCppDeclaration(method, clss));
                    }
                }
                tabs = tabs.substring(TAB_STRING.length());
                pw.println(tabs + "}; // end class " + clssOnlyName);
                tabs = tabs.substring(0, tabs.length() - 1);
                Class nextClass = (class_index < (classesSegList.size() - 1))
                        ? classesSegList.get(class_index + 1)
                        : null;
                tabs = closeClassNamespace(clss, pw, tabs, nextClass);
                pw.println();
                lastClass = clss;
            }
            //processTemplate(pw, map, HEADER_TEMPLATE_ENDH, tabs);
        }
    }
    for (int segment_index = 0; segment_index < num_class_segments; segment_index++) {
        String output_segment_file = output;
        if (output_segment_file.endsWith(".cpp")) {
            output_segment_file = output_segment_file.substring(0, output_segment_file.length() - 4);
        } else if (output_segment_file.endsWith(".cc")) {
            output_segment_file = output_segment_file.substring(0, output_segment_file.length() - 3);
        }
        output_segment_file += "" + String.format(fmt, segment_index) + ".cpp";
        try (PrintWriter pw = new PrintWriter(new FileWriter(output_segment_file))) {
            tabs = "";
            if (segment_index < 1) {
                processTemplate(pw, map, "cpp_template_start_first.cpp", tabs);
            } else {
                processTemplate(pw, map, CPP_TEMPLATE_STARTCPP, tabs);
            }
            final int start_segment_index = segment_index * classes_per_file;
            final int end_segment_index = Math.min(segment_index * classes_per_file + classes_per_file,
                    classes.size());
            List<Class> classesSegList = classes.subList(start_segment_index, end_segment_index);
            pw.println();
            pw.println(tabs + "// start_segment_index = " + start_segment_index);
            pw.println(tabs + "// start_segment_index = " + end_segment_index);
            pw.println(tabs + "// segment_index = " + segment_index);
            pw.println(tabs + "// classesSegList=" + classesSegList);
            pw.println();
            Class lastClass = null;
            for (int class_index = 0; class_index < classesSegList.size(); class_index++) {
                Class clss = classesSegList.get(class_index);
                pw.println();
                pw.println(tabs + "// class_index = " + class_index + " clss=" + clss);
                pw.println();
                String clssName = clss.getCanonicalName();
                tabs = openClassNamespace(clss, pw, tabs, lastClass);
                String clssOnlyName = getCppClassName(clss);
                map.put(CLASS_NAME, clssOnlyName);
                map.put("%BASE_CLASS_FULL_NAME%", classToCppBase(clss));

                map.put(FULL_CLASS_NAME, clssName);
                String fcjs = classToJNISignature(clss);
                fcjs = fcjs.substring(1, fcjs.length() - 1);
                map.put(FULL_CLASS_JNI_SIGNATURE, fcjs);
                if (verbose) {
                    System.out.println("fcjs = " + fcjs);
                }
                map.put(OBJECT_CLASS_FULL_NAME, getCppRelativeName(Object.class, clss));
                map.put("%INITIALIZE_CONTEXT%", "");
                map.put("%INITIALIZE_CONTEXT_REF%", "");
                processTemplate(pw, map, CPP_START_CLASSCPP, tabs);
                Constructor constructors[] = clss.getDeclaredConstructors();

                if (!hasNoArgConstructor(constructors)) {
                    if (!Modifier.isAbstract(clss.getModifiers()) && !clss.isInterface()) {
                        pw.println(tabs + clssOnlyName + "::" + clssOnlyName + "() : " + classToCppBase(clss)
                                + "((jobject)NULL,false) {");
                        map.put(JNI_SIGNATURE, "()V");
                        map.put(CONSTRUCTOR_ARGS, "");
                        processTemplate(pw, map, CPP_NEWCPP, tabs);
                        pw.println(tabs + "}");
                        pw.println();
                    }

                }
                for (Constructor c : constructors) {
                    if (checkConstructor(c, clss, classes)) {
                        continue;
                    }
                    Class[] paramClasses = c.getParameterTypes();
                    pw.println(tabs + clssOnlyName + "::" + clssOnlyName
                            + getCppParamDeclarations(paramClasses, clss) + " : " + classToCppBase(clss)
                            + "((jobject)NULL,false) {");
                    tabs = tabs + TAB_STRING;
                    map.put(JNI_SIGNATURE, "(" + getJNIParamSignature(paramClasses) + ")V");
                    map.put(CONSTRUCTOR_ARGS,
                            (paramClasses.length > 0 ? "," : "") + getCppParamNames(paramClasses));
                    processTemplate(pw, map, CPP_NEWCPP, tabs);
                    tabs = tabs.substring(0, tabs.length() - 1);
                    pw.println(tabs + "}");
                    pw.println();
                    if (isConstructorToMakeEasy(c, clss)) {
                        pw.println(tabs + clssOnlyName + "::" + clssOnlyName
                                + getEasyCallCppParamDeclarations(c.getParameterTypes(), clss) + " : "
                                + classToCppBase(clss) + "((jobject)NULL,false) {");
                        processTemplate(pw, map, "cpp_start_easy_constructor.cpp", tabs);
                        for (int paramIndex = 0; paramIndex < paramClasses.length; paramIndex++) {
                            Class paramClasse = paramClasses[paramIndex];
                            String parmName = getParamNameIn(paramClasse, paramIndex);
                            if (isString(paramClasse)) {
                                pw.println(tabs + "jstring " + parmName + " = env->NewStringUTF(easyArg_"
                                        + paramIndex + ");");
                            } else if (isPrimitiveArray(paramClasse)) {
                                String callString = getMethodCallString(paramClasse.getComponentType());
                                pw.println(tabs + getCppArrayType(paramClasse.getComponentType()) + " "
                                        + classToParamNameDecl(paramClasse, paramIndex) + "= env->New"
                                        + callString + "Array(easyArg_" + paramIndex + "_length);");
                                pw.println(tabs + "env->Set" + callString + "ArrayRegion("
                                        + classToParamNameDecl(paramClasse, paramIndex) + ",0,easyArg_"
                                        + paramIndex + "_length,easyArg_" + paramIndex + ");");
                            } else {
                                pw.println(tabs + getCppType(paramClasse, clss) + " "
                                        + classToParamNameDecl(paramClasse, paramIndex) + "= easyArg_"
                                        + paramIndex + ";");
                            }
                        }
                        processTemplate(pw, map, "cpp_new_easy_internals.cpp", tabs);
                        for (int paramIndex = 0; paramIndex < paramClasses.length; paramIndex++) {
                            Class paramClasse = paramClasses[paramIndex];
                            String parmName = getParamNameIn(paramClasse, paramIndex);
                            if (isString(paramClasse)) {
                                pw.println(tabs + "jobjectRefType ref_" + paramIndex
                                        + " = env->GetObjectRefType(" + parmName + ");");
                                pw.println(tabs + "if(ref_" + paramIndex + " == JNIGlobalRefType) {");
                                pw.println(tabs + TAB_STRING + "env->DeleteGlobalRef(" + parmName + ");");
                                pw.println(tabs + "}");
                            } else if (isPrimitiveArray(paramClasse)) {
                                String callString = getMethodCallString(paramClasse.getComponentType());
                                pw.println(tabs + "env->Get" + callString + "ArrayRegion("
                                        + classToParamNameDecl(paramClasse, paramIndex) + ",0,easyArg_"
                                        + paramIndex + "_length,easyArg_" + paramIndex + ");");
                                pw.println(tabs + "jobjectRefType ref_" + paramIndex
                                        + " = env->GetObjectRefType(" + parmName + ");");
                                pw.println(tabs + "if(ref_" + paramIndex + " == JNIGlobalRefType) {");
                                pw.println(tabs + TAB_STRING + "env->DeleteGlobalRef(" + parmName + ");");
                                pw.println(tabs + "}");
                            } else {

                            }
                        }
                        processTemplate(pw, map, "cpp_end_easy_constructor.cpp", tabs);
                        pw.println(tabs + "}");
                    }
                }

                pw.println();
                pw.println(tabs + "// Destructor for " + clssName);
                pw.println(tabs + clssOnlyName + "::~" + clssOnlyName + "() {");
                pw.println(tabs + "\t// Place-holder for later extensibility.");
                pw.println(tabs + "}");
                pw.println();
                Field fa[] = clss.getDeclaredFields();
                for (int findex = 0; findex < fa.length; findex++) {
                    Field field = fa[findex];
                    if (addGetterMethod(field, clss, classes)) {
                        pw.println();
                        pw.println(tabs + "// Field getter for " + field.getName());
                        pw.println(getCppFieldGetterDefinitionStart(tabs, clssOnlyName, field, clss));
                        map.put("%FIELD_NAME%", field.getName());
                        map.put(JNI_SIGNATURE, classToJNISignature(field.getType()));
                        Class returnClass = field.getType();
                        map.put(METHOD_ONFAIL, getOnFailString(returnClass, clss));
                        map.put(METHOD_ARGS, "");
                        map.put("%METHOD_RETURN%", isVoid(returnClass) ? "" : "return");
                        map.put("%METHOD_CALL_TYPE%", getMethodCallString(returnClass));
                        map.put("%METHOD_RETURN_TYPE%", getCppType(returnClass, clss));
                        map.put("%RETURN_VAR_DECLARE%", getMethodReturnVarDeclare(returnClass));
                        String retStore = isVoid(returnClass) ? ""
                                : "retVal= (" + getMethodReturnVarType(returnClass) + ") ";
                        map.put("%METHOD_RETURN_STORE%", retStore);
                        map.put("%METHOD_RETURN_GET%", getMethodReturnGet(tabs, returnClass, clss));

                        if (Modifier.isStatic(field.getModifiers())) {
                            processTemplate(pw, map, "cpp_static_getfield.cpp", tabs);
                        } else {
                            processTemplate(pw, map, "cpp_getfield.cpp", tabs);
                        }

                        pw.println(tabs + "}");
                    }
                    if (addSetterMethod(field, clss, classes)) {
                        pw.println();
                        pw.println(tabs + "// Field setter for " + field.getName());
                        pw.println(getCppFieldSetterDefinitionStart(tabs, clssOnlyName, field, clss));
                        map.put("%FIELD_NAME%", field.getName());
                        map.put(JNI_SIGNATURE, classToJNISignature(field.getType()));
                        Class returnClass = void.class;
                        map.put(METHOD_ONFAIL, getOnFailString(returnClass, clss));
                        Class[] paramClasses = new Class[] { field.getType() };
                        String methodArgs = getCppParamNames(paramClasses);
                        map.put(METHOD_ARGS, (paramClasses.length > 0 ? "," : "") + methodArgs);
                        map.put("%METHOD_RETURN%", isVoid(returnClass) ? "" : "return");
                        map.put("%METHOD_CALL_TYPE%", getMethodCallString(field.getType()));
                        map.put("%METHOD_RETURN_TYPE%", getCppType(returnClass, clss));
                        map.put("%RETURN_VAR_DECLARE%", getMethodReturnVarDeclare(returnClass));
                        String retStore = isVoid(returnClass) ? ""
                                : "retVal= (" + getMethodReturnVarType(returnClass) + ") ";
                        map.put("%METHOD_RETURN_STORE%", retStore);
                        map.put("%METHOD_RETURN_GET%", getMethodReturnGet(tabs, returnClass, clss));

                        if (Modifier.isStatic(field.getModifiers())) {
                            processTemplate(pw, map, "cpp_static_setfield.cpp", tabs);
                        } else {
                            processTemplate(pw, map, "cpp_setfield.cpp", tabs);
                        }

                        pw.println(tabs + "}");
                    }
                }
                Method methods[] = clss.getDeclaredMethods();
                for (int j = 0; j < methods.length; j++) {
                    Method method = methods[j];

                    if (checkMethod(method, classes)) {
                        pw.println();
                        pw.println(getCppMethodDefinitionStart(tabs, clssOnlyName, method, clss));
                        map.put(METHOD_NAME, method.getName());
                        if (fixMethodName(method).contains("equals2")) {
                            if (verbose) {
                                System.out.println("debug me");
                            }
                        }
                        map.put("%JAVA_METHOD_NAME%", method.getName());
                        Class[] paramClasses = method.getParameterTypes();
                        String methodArgs = getCppParamNames(paramClasses);
                        map.put(METHOD_ARGS, (paramClasses.length > 0 ? "," : "") + methodArgs);
                        Class returnClass = method.getReturnType();
                        map.put(JNI_SIGNATURE, "(" + getJNIParamSignature(paramClasses) + ")"
                                + classToJNISignature(returnClass));
                        map.put(METHOD_ONFAIL, getOnFailString(returnClass, clss));
                        map.put("%METHOD_RETURN%", isVoid(returnClass) ? "" : "return");
                        map.put("%METHOD_CALL_TYPE%", getMethodCallString(returnClass));
                        map.put("%METHOD_RETURN_TYPE%", getCppType(returnClass, clss));
                        map.put("%RETURN_VAR_DECLARE%", getMethodReturnVarDeclare(returnClass));
                        String retStore = isVoid(returnClass) ? ""
                                : "retVal= (" + getMethodReturnVarType(returnClass) + ") ";
                        map.put("%METHOD_RETURN_STORE%", retStore);
                        map.put("%METHOD_RETURN_GET%", getMethodReturnGet(tabs, returnClass, clss));
                        tabs += TAB_STRING;
                        if (!Modifier.isStatic(method.getModifiers())) {
                            processTemplate(pw, map, CPP_METHODCPP, tabs);
                        } else {
                            processTemplate(pw, map, CPP_STATIC_METHODCPP, tabs);
                        }
                        tabs = tabs.substring(0, tabs.length() - TAB_STRING.length());
                        pw.println(tabs + "}");
                        if (isArrayStringMethod(method)) {
                            map.put(METHOD_RETURN_STORE,
                                    isVoid(returnClass) ? "" : getCppType(returnClass, clss) + " returnVal=");
                            map.put(METHOD_RETURN_GET, isVoid(returnClass) ? "return ;" : "return returnVal;");
                            processTemplate(pw, map, CPP_EASY_STRING_ARRAY_METHODCPP, tabs);
                        } else if (isMethodToMakeEasy(method)) {
                            pw.println();
                            pw.println(tabs + "// Easy call alternative for " + method.getName());
                            pw.println(getEasyCallCppMethodDefinitionStart(tabs, clssOnlyName, method, clss));
                            tabs += TAB_STRING;
                            map.put("%RETURN_VAR_DECLARE%", getMethodReturnVarDeclareOut(returnClass, clss));
                            processTemplate(pw, map, "cpp_start_easy_method.cpp", tabs);
                            for (int paramIndex = 0; paramIndex < paramClasses.length; paramIndex++) {
                                Class paramClasse = paramClasses[paramIndex];
                                String parmName = getParamNameIn(paramClasse, paramIndex);
                                if (isString(paramClasse)) {
                                    pw.println(tabs + "jstring " + parmName + " = env->NewStringUTF(easyArg_"
                                            + paramIndex + ");");
                                } else if (isPrimitiveArray(paramClasse)) {
                                    String callString = getMethodCallString(paramClasse.getComponentType());
                                    pw.println(tabs + getCppArrayType(paramClasse.getComponentType()) + " "
                                            + classToParamNameDecl(paramClasse, paramIndex) + "= env->New"
                                            + callString + "Array(easyArg_" + paramIndex + "_length);");
                                    pw.println(tabs + "env->Set" + callString + "ArrayRegion("
                                            + classToParamNameDecl(paramClasse, paramIndex) + ",0,easyArg_"
                                            + paramIndex + "_length,easyArg_" + paramIndex + ");");
                                } else {
                                    pw.println(tabs + getCppType(paramClasse, clss) + " "
                                            + classToParamNameDecl(paramClasse, paramIndex) + "= easyArg_"
                                            + paramIndex + ";");
                                }
                            }
                            String methodArgsIn = getCppParamNamesIn(paramClasses);
                            String retStoreOut = isVoid(returnClass) ? ""
                                    : "retVal= (" + getMethodReturnOutVarType(returnClass, clss) + ") ";

                            pw.println(tabs + retStoreOut + fixMethodName(method) + "(" + methodArgsIn + ");");
                            for (int paramIndex = 0; paramIndex < paramClasses.length; paramIndex++) {
                                Class paramClasse = paramClasses[paramIndex];
                                String parmName = getParamNameIn(paramClasse, paramIndex);
                                if (isString(paramClasse)) {
                                    pw.println(tabs + "jobjectRefType ref_" + paramIndex
                                            + " = env->GetObjectRefType(" + parmName + ");");
                                    pw.println(tabs + "if(ref_" + paramIndex + " == JNIGlobalRefType) {");
                                    pw.println(tabs + TAB_STRING + "env->DeleteGlobalRef(" + parmName + ");");
                                    pw.println(tabs + "}");
                                } else if (isPrimitiveArray(paramClasse)) {
                                    String callString = getMethodCallString(paramClasse.getComponentType());
                                    pw.println(tabs + "env->Get" + callString + "ArrayRegion("
                                            + classToParamNameDecl(paramClasse, paramIndex) + ",0,easyArg_"
                                            + paramIndex + "_length,easyArg_" + paramIndex + ");");
                                    pw.println(tabs + "jobjectRefType ref_" + paramIndex
                                            + " = env->GetObjectRefType(" + parmName + ");");
                                    pw.println(tabs + "if(ref_" + paramIndex + " == JNIGlobalRefType) {");
                                    pw.println(tabs + TAB_STRING + "env->DeleteGlobalRef(" + parmName + ");");
                                    pw.println(tabs + "}");
                                } else {

                                }
                            }
                            processTemplate(pw, map, "cpp_end_easy_method.cpp", tabs);
                            if (!isVoid(returnClass)) {
                                pw.println(tabs + "return retVal;");
                            }
                            tabs = tabs.substring(TAB_STRING.length());
                            pw.println(tabs + "}");
                            pw.println();
                        }
                    }
                }
                processTemplate(pw, map, CPP_END_CLASSCPP, tabs);
                tabs = tabs.substring(0, tabs.length() - 1);
                Class nextClass = (class_index < (classesSegList.size() - 1))
                        ? classesSegList.get(class_index + 1)
                        : null;
                tabs = closeClassNamespace(clss, pw, tabs, nextClass);
                lastClass = clss;
            }

            if (segment_index < 1) {
                if (null != nativesClassMap) {
                    for (Entry<String, Class> e : nativesClassMap.entrySet()) {
                        final Class javaClass = e.getValue();
                        final String nativeClassName = e.getKey();
                        map.put(CLASS_NAME, nativeClassName);
                        map.put(FULL_CLASS_NAME, nativeClassName);
                        map.put(FULL_CLASS_JNI_SIGNATURE, nativeClassName);
                        map.put("%BASE_CLASS_FULL_NAME%",
                                "::" + namespace + "::" + getModifiedClassName(javaClass).replace(".", "::"));
                        map.put(OBJECT_CLASS_FULL_NAME, "::" + namespace + "::java::lang::Object");
                        map.put("%INITIALIZE_CONTEXT%", "context=NULL; initContext(NULL,false);");
                        map.put("%INITIALIZE_CONTEXT_REF%", "context=NULL; initContext(objref.context,true);");
                        tabs += TAB_STRING;

                        processTemplate(pw, map, CPP_START_CLASSCPP, tabs);
                        pw.println();
                        pw.println(tabs + nativeClassName + "::" + nativeClassName + "() : "
                                + getModifiedClassName(javaClass).replace(".", "::")
                                + "((jobject)NULL,false) {");
                        tabs += TAB_STRING;
                        pw.println(tabs + "context=NULL;");
                        pw.println(tabs + "initContext(NULL,false);");
                        map.put(JNI_SIGNATURE, "()V");
                        map.put(CONSTRUCTOR_ARGS, "");
                        processTemplate(pw, map, "cpp_new_native.cpp", tabs);
                        tabs = tabs.substring(TAB_STRING.length());
                        pw.println(tabs + "}");
                        pw.println();
                        pw.println(tabs + "// Destructor for " + nativeClassName);
                        pw.println(tabs + nativeClassName + "::~" + nativeClassName + "() {");
                        pw.println(tabs + TAB_STRING + "if(NULL != context) {");
                        pw.println(tabs + TAB_STRING + TAB_STRING + "deleteContext();");
                        pw.println(tabs + TAB_STRING + "}");
                        pw.println(tabs + TAB_STRING + "context=NULL;");
                        pw.println(tabs + "}");
                        pw.println();
                        //                            pw.println(tabs + "public:");
                        //                            pw.println(tabs + nativeClassName + "();");
                        //                            pw.println(tabs + "~" + nativeClassName + "();");
                        tabs = tabs.substring(TAB_STRING.length());
                        //                            Method methods[] = javaClass.getDeclaredMethods();
                        //                            for (int j = 0; j < methods.length; j++) {
                        //                                Method method = methods[j];
                        //                                int modifiers = method.getModifiers();
                        //                                if (!Modifier.isPublic(modifiers)) {
                        //                                    continue;
                        //                                }
                        //                                pw.println(tabs + getCppDeclaration(method, javaClass));
                        //                            }
                        //                            pw.println(tabs + "}; // end class " + nativeClassName);
                        processTemplate(pw, map, CPP_END_CLASSCPP, tabs);
                    }
                }
                processTemplate(pw, map, "cpp_template_end_first.cpp", tabs);
                tabs = "";
                if (null != nativesClassMap) {
                    pw.println("using namespace " + namespace + ";");
                    pw.println("#ifdef __cplusplus");
                    pw.println("extern \"C\" {");
                    pw.println("#endif");
                    int max_method_count = 0;
                    tabs = "";
                    for (Entry<String, Class> e : nativesClassMap.entrySet()) {
                        final Class javaClass = e.getValue();
                        final String nativeClassName = e.getKey();
                        map.put(CLASS_NAME, nativeClassName);
                        map.put(FULL_CLASS_NAME, nativeClassName);
                        map.put("%BASE_CLASS_FULL_NAME%",
                                "::" + namespace + "::" + getModifiedClassName(javaClass).replace(".", "::"));
                        map.put(OBJECT_CLASS_FULL_NAME, "::" + namespace + "::java::lang::Object");
                        map.put(FULL_CLASS_JNI_SIGNATURE, nativeClassName);
                        map.put(METHOD_ONFAIL, "return;");
                        Method methods[] = javaClass.getDeclaredMethods();
                        if (max_method_count < methods.length) {
                            max_method_count = methods.length;
                        }
                        for (int j = 0; j < methods.length; j++) {
                            Method method = methods[j];
                            int modifiers = method.getModifiers();
                            if (!Modifier.isPublic(modifiers)) {
                                continue;
                            }
                            if (Modifier.isAbstract(modifiers) && Modifier.isPublic(modifiers)
                                    && !Modifier.isStatic(modifiers)
                                    //                                        && !method.isDefault()
                                    && !method.isSynthetic()) {
                                Class[] paramClasses = method.getParameterTypes();
                                String methodArgs = getCppParamNames(paramClasses);
                                map.put(METHOD_ARGS, methodArgs);
                                map.put(METHOD_NAME, method.getName());
                                Class returnClass = method.getReturnType();
                                String retStore = isVoid(returnClass) ? ""
                                        : "retVal= (" + getMethodReturnVarType(returnClass) + ") ";
                                map.put(METHOD_ONFAIL, getOnFailString(returnClass, javaClass));
                                map.put("%RETURN_VAR_DECLARE%", getMethodReturnVarDeclare(returnClass));
                                map.put("%METHOD_RETURN_STORE%", retStore);
                                map.put("%METHOD_RETURN_GET%",
                                        getMethodReturnGet(tabs, returnClass, javaClass));
                                pw.println();
                                String paramDecls = getCppParamDeclarations(paramClasses, javaClass);
                                String argsToAdd = method.getParameterTypes().length > 0
                                        ? "," + paramDecls.substring(1, paramDecls.length() - 1)
                                        : "";
                                pw.println("JNIEXPORT " + getCppType(returnClass, javaClass) + " JNICALL Java_"
                                        + nativeClassName + "_" + method.getName()
                                        + "(JNIEnv *env, jobject jthis" + argsToAdd + ") {");
                                tabs = TAB_STRING;
                                processTemplate(pw, map, "cpp_native_wrap.cpp", tabs);
                                tabs = tabs.substring(TAB_STRING.length());
                                pw.println("}");
                                pw.println();
                            }
                        }
                        pw.println("JNIEXPORT void JNICALL Java_" + nativeClassName
                                + "_nativeDelete(JNIEnv *env, jobject jthis) {");
                        tabs += TAB_STRING;
                        map.put(METHOD_ONFAIL, getOnFailString(void.class, javaClass));
                        processTemplate(pw, map, "cpp_native_delete.cpp", tabs);
                        tabs = tabs.substring(TAB_STRING.length());
                        pw.println(tabs + "}");
                        pw.println();
                    }
                    pw.println("#ifdef __cplusplus");
                    pw.println("} // end extern \"C\"");
                    pw.println("#endif");
                    map.put("%MAX_METHOD_COUNT%", Integer.toString(max_method_count + 1));
                    processTemplate(pw, map, "cpp_start_register_native.cpp", tabs);
                    for (Entry<String, Class> e : nativesClassMap.entrySet()) {
                        final Class javaClass = e.getValue();
                        final String nativeClassName = e.getKey();
                        map.put(CLASS_NAME, nativeClassName);
                        map.put(FULL_CLASS_NAME, nativeClassName);
                        map.put("%BASE_CLASS_FULL_NAME%",
                                "::" + namespace + "::" + getModifiedClassName(javaClass).replace(".", "::"));
                        map.put(OBJECT_CLASS_FULL_NAME, "::" + namespace + "::java::lang::Object");
                        processTemplate(pw, map, "cpp_start_register_native_class.cpp", tabs);
                        tabs += TAB_STRING;
                        Method methods[] = javaClass.getDeclaredMethods();
                        int method_number = 0;
                        for (int j = 0; j < methods.length; j++) {
                            Method method = methods[j];
                            int modifiers = method.getModifiers();
                            if (!Modifier.isPublic(modifiers)) {
                                continue;
                            }
                            if (Modifier.isAbstract(modifiers) && Modifier.isPublic(modifiers)
                                    && !Modifier.isStatic(modifiers)
                                    //                                        && !method.isDefault()
                                    && !method.isSynthetic()) {
                                map.put("%METHOD_NUMBER%", Integer.toString(method_number));
                                map.put(METHOD_NAME, method.getName());

                                map.put(JNI_SIGNATURE, "(" + getJNIParamSignature(method.getParameterTypes())
                                        + ")" + classToJNISignature(method.getReturnType()));
                                processTemplate(pw, map, "cpp_register_native_item.cpp", tabs);
                                method_number++;
                            }
                        }
                        map.put("%METHOD_NUMBER%", Integer.toString(method_number));
                        map.put(METHOD_NAME, "nativeDelete");
                        map.put(JNI_SIGNATURE, "()V");
                        processTemplate(pw, map, "cpp_register_native_item.cpp", tabs);
                        map.put("%NUM_NATIVE_METHODS%", Integer.toString(method_number));
                        processTemplate(pw, map, "cpp_end_register_native_class.cpp", tabs);
                        tabs = tabs.substring(TAB_STRING.length());
                    }
                    processTemplate(pw, map, "cpp_end_register_native.cpp", tabs);
                } else {
                    pw.println("// No Native classes : registerNativMethods not needed.");
                    pw.println("static void registerNativeMethods(JNIEnv *env) {}");
                }

            } else {
                processTemplate(pw, map, CPP_TEMPLATE_ENDCPP, tabs);
            }
        }
        if (null != nativesClassMap) {
            tabs = "";
            for (Entry<String, Class> e : nativesClassMap.entrySet()) {
                String nativeClassName = e.getKey();
                File nativeClassHeaderFile = new File(
                        namespace.toLowerCase() + "_" + nativeClassName.toLowerCase() + ".h");
                map.put("%NATIVE_CLASS_HEADER%", nativeClassHeaderFile.getName());
                map.put(CLASS_NAME, nativeClassName);
                if (nativeClassHeaderFile.exists()) {
                    if (verbose) {
                        System.out.println("skipping " + nativeClassHeaderFile.getCanonicalPath()
                                + " since it already exists.");
                    }
                } else {
                    try (PrintWriter pw = new PrintWriter(new FileWriter(nativeClassHeaderFile))) {
                        processTemplate(pw, map, "header_native_imp.h", tabs);
                    }
                }
                File nativeClassCppFile = new File(
                        namespace.toLowerCase() + "_" + nativeClassName.toLowerCase() + ".cpp");
                if (nativeClassCppFile.exists()) {
                    if (verbose) {
                        System.out.println("skipping " + nativeClassCppFile.getCanonicalPath()
                                + " since it already exists.");
                    }
                } else {
                    try (PrintWriter pw = new PrintWriter(new FileWriter(nativeClassCppFile))) {
                        processTemplate(pw, map, "cpp_native_imp_start.cpp", tabs);
                        Class javaClass = e.getValue();
                        Method methods[] = javaClass.getDeclaredMethods();
                        int method_number = 0;
                        for (int j = 0; j < methods.length; j++) {
                            Method method = methods[j];
                            int modifiers = method.getModifiers();
                            if (!Modifier.isPublic(modifiers)) {
                                continue;
                            }
                            if (Modifier.isAbstract(modifiers) && Modifier.isPublic(modifiers)
                                    && !Modifier.isStatic(modifiers)
                                    //                                        && !method.isDefault()
                                    && !method.isSynthetic()) {
                                Class[] paramClasses = method.getParameterTypes();
                                //                                    String methodArgs = getCppParamNames(paramClasses);
                                String paramDecls = getCppParamDeclarations(paramClasses, javaClass);
                                String methodArgs = method.getParameterTypes().length > 0
                                        ? paramDecls.substring(1, paramDecls.length() - 1)
                                        : "";
                                map.put(METHOD_ARGS, methodArgs);
                                map.put(METHOD_NAME, method.getName());
                                Class returnClass = method.getReturnType();
                                String retStore = isVoid(returnClass) ? ""
                                        : "retVal= (" + getMethodReturnVarType(returnClass) + ") ";
                                map.put(METHOD_ONFAIL, getOnFailString(returnClass, javaClass));
                                map.put("%RETURN_TYPE%", getCppType(returnClass, javaClass));
                                map.put("%RETURN_VAR_DECLARE%", getMethodReturnVarDeclare(returnClass));
                                map.put("%METHOD_RETURN_STORE%", retStore);
                                map.put("%METHOD_RETURN_GET%",
                                        getMethodReturnGet(tabs, returnClass, javaClass));
                                processTemplate(pw, map, "cpp_native_imp_stub.cpp", tabs);
                            }
                        }
                        processTemplate(pw, map, "cpp_native_imp_end.cpp", tabs);
                    }
                }
            }
        }
    }

    main_completed = true;
}

From source file:FaceRatios.java

@SuppressWarnings("serial")
public static void main(String[] args) {
    int r = FSDK.ActivateLibrary(FACE_SDK_LICENSE);
    if (r == FSDK.FSDKE_OK) {
        FSDK.Initialize();//from w  w  w.  j  a  v a  2s .c  om
        FSDK.SetFaceDetectionParameters(true, true, 384);

        Map<String, Map<String, ArrayList<Double>>> faceProperties = new HashMap<>();

        for (String directory : new File(FACE_DIRECTORY).list()) {
            if (new File(FACE_DIRECTORY + directory).isDirectory()) {
                Map<String, ArrayList<Double>> properties = new HashMap<String, ArrayList<Double>>() {
                    {
                        for (String property : propertyNames)
                            put(property, new ArrayList<Double>());
                    }
                };

                File[] files = new File(FACE_DIRECTORY + directory).listFiles();
                System.out.println("Analyzing " + directory + " with " + files.length + " files\n");
                for (File file : files) {
                    if (file.isFile()) {
                        HImage imageHandle = new HImage();
                        FSDK.LoadImageFromFileW(imageHandle, file.getAbsolutePath());

                        FSDK.TFacePosition.ByReference facePosition = new FSDK.TFacePosition.ByReference();
                        if (FSDK.DetectFace(imageHandle, facePosition) == FSDK.FSDKE_OK) {
                            FSDK_Features.ByReference facialFeatures = new FSDK_Features.ByReference();
                            FSDK.DetectFacialFeaturesInRegion(imageHandle, (FSDK.TFacePosition) facePosition,
                                    facialFeatures);

                            Point[] featurePoints = new Point[FSDK.FSDK_FACIAL_FEATURE_COUNT];
                            for (int i = 0; i < FSDK.FSDK_FACIAL_FEATURE_COUNT; i++) {
                                featurePoints[i] = new Point(0, 0);
                                featurePoints[i].x = facialFeatures.features[i].x;
                                featurePoints[i].y = facialFeatures.features[i].y;
                            }

                            double eyeDistance = featureDistance(featurePoints, FeatureID.LEFT_EYE,
                                    FeatureID.RIGHT_EYE);
                            double rightEyeSize = featureDistance(featurePoints,
                                    FeatureID.RIGHT_EYE_INNER_CORNER, FeatureID.RIGHT_EYE_OUTER_CORNER);
                            double leftEyeSize = featureDistance(featurePoints, FeatureID.LEFT_EYE_INNER_CORNER,
                                    FeatureID.LEFT_EYE_OUTER_CORNER);
                            double averageEyeSize = (rightEyeSize + leftEyeSize) / 2;

                            double mouthLength = featureDistance(featurePoints, FeatureID.MOUTH_RIGHT_CORNER,
                                    FeatureID.MOUTH_LEFT_CORNER);
                            double mouthHeight = featureDistance(featurePoints, FeatureID.MOUTH_BOTTOM,
                                    FeatureID.MOUTH_TOP);
                            double noseHeight = featureDistance(featurePoints, FeatureID.NOSE_BOTTOM,
                                    FeatureID.NOSE_BRIDGE);
                            double chinHeight = featureDistance(featurePoints, FeatureID.CHIN_BOTTOM,
                                    FeatureID.MOUTH_BOTTOM);

                            double chinToBridgeHeight = featureDistance(featurePoints, FeatureID.CHIN_BOTTOM,
                                    FeatureID.NOSE_BRIDGE);

                            double faceContourLeft = (featurePoints[FeatureID.CHIN_BOTTOM.getIndex()].getY()
                                    - featurePoints[FeatureID.FACE_CONTOUR2.getIndex()].getY())
                                    / (featurePoints[FeatureID.CHIN_BOTTOM.getIndex()].getX()
                                            - featurePoints[FeatureID.FACE_CONTOUR2.getIndex()].getX());
                            double faceContourRight = (featurePoints[FeatureID.CHIN_BOTTOM.getIndex()].getY()
                                    - featurePoints[FeatureID.FACE_CONTOUR12.getIndex()].getY())
                                    / (featurePoints[FeatureID.CHIN_BOTTOM.getIndex()].getX()
                                            - featurePoints[FeatureID.FACE_CONTOUR12.getIndex()].getX());

                            double bridgeLeftEyeDistance = featureDistance(featurePoints,
                                    FeatureID.LEFT_EYE_INNER_CORNER, FeatureID.NOSE_BRIDGE);
                            double bridgeRightEyeDistance = featureDistance(featurePoints,
                                    FeatureID.RIGHT_EYE_INNER_CORNER, FeatureID.NOSE_BRIDGE);

                            properties.get("eyeSize/eyeDistance").add(averageEyeSize / eyeDistance);
                            properties.get("eyeSizeDisparity")
                                    .add(Math.abs(leftEyeSize - rightEyeSize) / averageEyeSize);
                            properties.get("bridgeToEyeDisparity")
                                    .add(Math.abs(bridgeLeftEyeDistance - bridgeRightEyeDistance)
                                            / ((bridgeLeftEyeDistance + bridgeRightEyeDistance) / 2));
                            properties.get("eyeDistance/mouthLength").add(eyeDistance / mouthLength);
                            properties.get("eyeDistance/noseHeight").add(eyeDistance / noseHeight);
                            properties.get("eyeSize/mouthLength").add(eyeDistance / mouthLength);
                            properties.get("eyeSize/noseHeight").add(eyeDistance / noseHeight);
                            properties.get("mouthLength/mouthHeight").add(mouthLength / mouthHeight);
                            properties.get("chinHeight/noseHeight").add(chinHeight / noseHeight);
                            properties.get("chinHeight/chinToBridgeHeight")
                                    .add(chinHeight / chinToBridgeHeight);
                            properties.get("noseHeight/chinToBridgeHeight")
                                    .add(noseHeight / chinToBridgeHeight);
                            properties.get("mouthHeight/chinToBridgeHeight")
                                    .add(mouthHeight / chinToBridgeHeight);
                            properties.get("faceCountourAngle")
                                    .add(Math.toDegrees(Math.atan((faceContourLeft - faceContourRight)
                                            / (1 + faceContourLeft * faceContourRight))));
                        }

                        FSDK.FreeImage(imageHandle);
                    }
                }

                System.out.format("%32s\t%8s\t%8s\t%3s%n", "Property", "", "", "c");
                System.out.println(new String(new char[76]).replace("\0", "-"));

                ArrayList<Entry<String, ArrayList<Double>>> propertyList = new ArrayList<>(
                        properties.entrySet());
                Collections.sort(propertyList, new Comparator<Entry<String, ArrayList<Double>>>() {
                    @Override
                    public int compare(Entry<String, ArrayList<Double>> arg0,
                            Entry<String, ArrayList<Double>> arg1) {
                        DescriptiveStatistics dStats0 = new DescriptiveStatistics(listToArray(arg0.getValue()));
                        DescriptiveStatistics dStats1 = new DescriptiveStatistics(listToArray(arg1.getValue()));
                        return new Double(dStats0.getStandardDeviation() / dStats0.getMean())
                                .compareTo(dStats1.getStandardDeviation() / dStats1.getMean());
                    }
                });

                for (Entry<String, ArrayList<Double>> property : propertyList) {
                    DescriptiveStatistics dStats = new DescriptiveStatistics(listToArray(property.getValue()));
                    System.out.format("%32s\t%4f\t%4f\t%3s%n", property.getKey(), dStats.getMean(),
                            dStats.getStandardDeviation(),
                            Math.round(dStats.getStandardDeviation() / dStats.getMean() * 100) + "%");
                }

                System.out.println("\n");
                faceProperties.put(directory, properties);
            }
        }

        for (String propertyName : propertyNames) {
            DefaultBoxAndWhiskerCategoryDataset dataset = new DefaultBoxAndWhiskerCategoryDataset();
            for (Entry<String, Map<String, ArrayList<Double>>> face : faceProperties.entrySet()) {
                dataset.add(face.getValue().get(propertyName), "Default Series", face.getKey());
            }

            PropertyBoxWhisker plot = new PropertyBoxWhisker(propertyName, dataset);
            plot.pack();
            plot.setVisible(true);
        }
    }
}

From source file:Main.java

public static final Map<String, String> getMap() {
    Map<String, String> map = new HashMap<String, String>();
    map.put("x", "y");
    return Collections.unmodifiableMap(map);
}

From source file:Main.java

public static void evalIdEqMap(Map<String, Object> map, Long id) {
    map.put("id", id);
}

From source file:Main.java

public static <A, B> Map<A, B> singletonMap(A a, B b) {
    Map<A, B> map = new HashMap<A, B>();
    map.put(a, b);
    return map;/*  www.j  av a 2 s.  co m*/
}