Example usage for java.util ListIterator hasNext

List of usage examples for java.util ListIterator hasNext

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Introduction

In this page you can find the example usage for java.util ListIterator hasNext.

Prototype

boolean hasNext();

Source Link

Document

Returns true if this list iterator has more elements when traversing the list in the forward direction.

Usage

From source file:net.sourceforge.msscodefactory.cfasterisk.v2_0.CFAstMySql.CFAstMySqlDomainBaseTable.java

public CFAstDomainBaseBuff[] readDerivedByTenantIdx(CFAstAuthorization Authorization, long TenantId) {
    final String S_ProcName = "readDerivedByTenantIdx";
    if (!schema.isTransactionOpen()) {
        throw CFLib.getDefaultExceptionFactory().newUsageException(getClass(), S_ProcName,
                "Transaction not open");
    }//ww w. j  av a 2s.c om
    ArrayList<String> classCodeList = new ArrayList<String>();
    String classCode;
    ResultSet resultSet = null;
    try {
        Connection cnx = schema.getCnx();
        String sql = "call " + schema.getLowerSchemaDbName() + ".sp_read_bdomdef_cc_by_tenantidx( ?, ?, ?, ?, ?"
                + ", " + "?" + " )";
        if (stmtReadClassCodeByTenantIdx == null) {
            stmtReadClassCodeByTenantIdx = cnx.prepareStatement(sql);
        }
        int argIdx = 1;
        stmtReadClassCodeByTenantIdx.setLong(argIdx++,
                (Authorization == null) ? 0 : Authorization.getSecClusterId());
        stmtReadClassCodeByTenantIdx.setString(argIdx++,
                (Authorization == null) ? "" : Authorization.getSecUserId().toString());
        stmtReadClassCodeByTenantIdx.setString(argIdx++,
                (Authorization == null) ? "" : Authorization.getSecSessionId().toString());
        stmtReadClassCodeByTenantIdx.setLong(argIdx++,
                (Authorization == null) ? 0 : Authorization.getSecClusterId());
        stmtReadClassCodeByTenantIdx.setLong(argIdx++,
                (Authorization == null) ? 0 : Authorization.getSecTenantId());
        stmtReadClassCodeByTenantIdx.setLong(argIdx++, TenantId);
        try {
            resultSet = stmtReadClassCodeByTenantIdx.executeQuery();
        } catch (SQLException e) {
            if (e.getErrorCode() != 1329) {
                throw e;
            }
            resultSet = null;
        }
        while ((resultSet != null) && resultSet.next()) {
            classCode = resultSet.getString(1);
            classCodeList.add(classCode);
        }
    } catch (SQLException e) {
        throw CFLib.getDefaultExceptionFactory().newDbException(getClass(), S_ProcName, e);
    } finally {
        if (resultSet != null) {
            try {
                resultSet.close();
            } catch (SQLException e) {
            }
            resultSet = null;
        }
    }
    List<CFAstDomainBaseBuff> resultList = new LinkedList<CFAstDomainBaseBuff>();
    ListIterator<String> classCodeIter = classCodeList.listIterator();
    while (classCodeIter.hasNext()) {
        classCode = classCodeIter.next();
        if (classCode.equals("BDOM")) {
            CFAstDomainBaseBuff[] subList = readBuffByTenantIdx(Authorization, TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("TDOM")) {
            CFAstTopDomainBuff[] subList = schema.getTableTopDomain().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("DOMN")) {
            CFAstDomainBuff[] subList = schema.getTableDomain().readBuffByTenantIdx(Authorization, TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("BPRJ")) {
            CFAstProjectBaseBuff[] subList = schema.getTableProjectBase().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("RPRJ")) {
            CFAstRealProjectBuff[] subList = schema.getTableRealProject().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("TPRJ")) {
            CFAstTopProjectBuff[] subList = schema.getTableTopProject().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("SPRJ")) {
            CFAstSubProjectBuff[] subList = schema.getTableSubProject().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("VERN")) {
            CFAstVersionBuff[] subList = schema.getTableVersion().readBuffByTenantIdx(Authorization, TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("MJVR")) {
            CFAstMajorVersionBuff[] subList = schema.getTableMajorVersion().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("MNVR")) {
            CFAstMinorVersionBuff[] subList = schema.getTableMinorVersion().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else {
            throw CFLib.getDefaultExceptionFactory().newRuntimeException(getClass(), S_ProcName,
                    "Did not expect ClassCode \"" + classCode + "\"");
        }
    }
    int idx = 0;
    CFAstDomainBaseBuff[] retBuff = new CFAstDomainBaseBuff[resultList.size()];
    Iterator<CFAstDomainBaseBuff> iter = resultList.iterator();
    while (iter.hasNext()) {
        retBuff[idx++] = iter.next();
    }
    return (retBuff);

}

From source file:net.sourceforge.msscodefactory.cfasterisk.v2_1.CFAstMySql.CFAstMySqlDomainBaseTable.java

public CFAstDomainBaseBuff[] readDerivedByTenantIdx(CFAstAuthorization Authorization, long TenantId) {
    final String S_ProcName = "readDerivedByTenantIdx";
    if (!schema.isTransactionOpen()) {
        throw CFLib.getDefaultExceptionFactory().newUsageException(getClass(), S_ProcName,
                "Transaction not open");
    }//from w  ww.j  av a 2  s .c o m
    ArrayList<String> classCodeList = new ArrayList<String>();
    String classCode;
    ResultSet resultSet = null;
    try {
        Connection cnx = schema.getCnx();
        String sql = "call " + schema.getLowerDbSchemaName() + ".sp_read_bdomdef_cc_by_tenantidx( ?, ?, ?, ?, ?"
                + ", " + "?" + " )";
        if (stmtReadClassCodeByTenantIdx == null) {
            stmtReadClassCodeByTenantIdx = cnx.prepareStatement(sql);
        }
        int argIdx = 1;
        stmtReadClassCodeByTenantIdx.setLong(argIdx++,
                (Authorization == null) ? 0 : Authorization.getSecClusterId());
        stmtReadClassCodeByTenantIdx.setString(argIdx++,
                (Authorization == null) ? "" : Authorization.getSecUserId().toString());
        stmtReadClassCodeByTenantIdx.setString(argIdx++,
                (Authorization == null) ? "" : Authorization.getSecSessionId().toString());
        stmtReadClassCodeByTenantIdx.setLong(argIdx++,
                (Authorization == null) ? 0 : Authorization.getSecClusterId());
        stmtReadClassCodeByTenantIdx.setLong(argIdx++,
                (Authorization == null) ? 0 : Authorization.getSecTenantId());
        stmtReadClassCodeByTenantIdx.setLong(argIdx++, TenantId);
        try {
            resultSet = stmtReadClassCodeByTenantIdx.executeQuery();
        } catch (SQLException e) {
            if (e.getErrorCode() != 1329) {
                throw e;
            }
            resultSet = null;
        }
        while ((resultSet != null) && resultSet.next()) {
            classCode = resultSet.getString(1);
            classCodeList.add(classCode);
        }
    } catch (SQLException e) {
        throw CFLib.getDefaultExceptionFactory().newDbException(getClass(), S_ProcName, e);
    } finally {
        if (resultSet != null) {
            try {
                resultSet.close();
            } catch (SQLException e) {
            }
            resultSet = null;
        }
    }
    List<CFAstDomainBaseBuff> resultList = new LinkedList<CFAstDomainBaseBuff>();
    ListIterator<String> classCodeIter = classCodeList.listIterator();
    while (classCodeIter.hasNext()) {
        classCode = classCodeIter.next();
        if (classCode.equals("BDOM")) {
            CFAstDomainBaseBuff[] subList = readBuffByTenantIdx(Authorization, TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("TDOM")) {
            CFAstTopDomainBuff[] subList = schema.getTableTopDomain().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("DOMN")) {
            CFAstDomainBuff[] subList = schema.getTableDomain().readBuffByTenantIdx(Authorization, TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("BPRJ")) {
            CFAstProjectBaseBuff[] subList = schema.getTableProjectBase().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("RPRJ")) {
            CFAstRealProjectBuff[] subList = schema.getTableRealProject().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("TPRJ")) {
            CFAstTopProjectBuff[] subList = schema.getTableTopProject().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("SPRJ")) {
            CFAstSubProjectBuff[] subList = schema.getTableSubProject().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("VERN")) {
            CFAstVersionBuff[] subList = schema.getTableVersion().readBuffByTenantIdx(Authorization, TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("MJVR")) {
            CFAstMajorVersionBuff[] subList = schema.getTableMajorVersion().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("MNVR")) {
            CFAstMinorVersionBuff[] subList = schema.getTableMinorVersion().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else {
            throw CFLib.getDefaultExceptionFactory().newRuntimeException(getClass(), S_ProcName,
                    "Did not expect ClassCode \"" + classCode + "\"");
        }
    }
    int idx = 0;
    CFAstDomainBaseBuff[] retBuff = new CFAstDomainBaseBuff[resultList.size()];
    Iterator<CFAstDomainBaseBuff> iter = resultList.iterator();
    while (iter.hasNext()) {
        retBuff[idx++] = iter.next();
    }
    return (retBuff);

}

From source file:org.opennms.ng.services.collectd.Collectd.java

private void unscheduleNodeAndMarkForDeletion(Long nodeId) {
    // Iterate over the collectable service list and mark any entries
    // which match the deleted nodeId for deletion.
    synchronized (getCollectableServices()) {
        CollectableService cSvc = null;/*from www.ja  v a 2  s .c o  m*/
        final ListIterator<CollectableService> liter = getCollectableServices().listIterator();
        while (liter.hasNext()) {
            cSvc = liter.next();

            // Only interested in entries with matching nodeId
            if (!(cSvc.getNodeId() == nodeId)) {
                continue;
            }

            synchronized (cSvc) {
                // Retrieve the CollectorUpdates object associated
                // with this CollectableService.
                CollectorUpdates updates = cSvc.getCollectorUpdates();

                // Now set the update's deletion flag so the next
                // time it is selected for execution by the scheduler
                // the collection will be skipped and the service will not
                // be rescheduled.
                LOG.debug(
                        "Marking CollectableService for deletion because a node was deleted:  Service nodeid={}, deleted node:{}",
                        cSvc.getNodeId(), nodeId);
                updates.markForDeletion();
            }

            // Now safe to remove the collectable service from
            // the collectable services list
            liter.remove();
        }
    }
}

From source file:org.opennms.ng.services.collectd.Collectd.java

/**
 * This method is responsible for handling interfaceDeleted events.
 *
 * @param event The event to process./*from   ww  w.j  a v a 2s  . c  o  m*/
 * @throws InsufficientInformationException
 */
private void handleInterfaceDeleted(Event event) throws InsufficientInformationException {
    EventUtils.checkNodeId(event);

    String ipAddr = event.getInterface();
    if (EventUtils.isNonIpInterface(ipAddr)) {
        LOG.debug("handleInterfaceDeleted: the deleted interface was a non-ip interface. Nothing to do here.");
        return;
    }

    Long nodeId = event.getNodeid();

    // Iterate over the collectable services list and mark any entries
    // which match the deleted nodeId/IP address pair for deletion
    synchronized (getCollectableServices()) {
        CollectableService cSvc = null;
        ListIterator<CollectableService> liter = getCollectableServices().listIterator();
        while (liter.hasNext()) {
            cSvc = liter.next();

            // Only interested in entries with matching nodeId and IP
            // address
            InetAddress addr = (InetAddress) cSvc.getAddress();
            if (!(cSvc.getNodeId() == nodeId && addr.getHostName().equals(ipAddr))) {
                continue;
            }

            synchronized (cSvc) {
                // Retrieve the CollectorUpdates object associated with
                // this CollectableService if one exists.
                CollectorUpdates updates = cSvc.getCollectorUpdates();

                // Now set the update's deletion flag so the next
                // time it is selected for execution by the scheduler
                // the collection will be skipped and the service will not
                // be rescheduled.
                LOG.debug(
                        "Marking CollectableService for deletion because an interface was deleted:  Service nodeid={}, "
                                + "deleted node:{}service address:{}deleted interface:{}",
                        cSvc.getNodeId(), nodeId, addr.getHostName(), ipAddr);

                updates.markForDeletion();
            }

            // Now safe to remove the collectable service from
            // the collectable services list
            liter.remove();
        }
    }

    LOG.debug("interfaceDeletedHandler: processing of interfaceDeleted event for {}/{} completed", nodeId,
            ipAddr);
}

From source file:org.opennms.ng.services.collectd.Collectd.java

/**
 * This method is responsible for handling serviceDeleted events.
 *
 * @param event The event to process.//  w w  w .j  av a 2 s .c om
 * @throws InsufficientInformationException
 */
private void handleServiceDeleted(Event event) throws InsufficientInformationException {
    EventUtils.checkNodeId(event);
    EventUtils.checkInterface(event);
    EventUtils.checkService(event);

    //INCORRECT; we now support all *sorts* of data collection.  This is *way* out of date
    // Currently only support SNMP data collection.
    //
    //if (!event.getService().equals("SNMP"))
    //    return;

    Long nodeId = event.getNodeid();
    String ipAddr = event.getInterface();
    String svcName = event.getService();

    // Iterate over the collectable services list and mark any entries
    // which match the nodeId/ipAddr of the deleted service
    // for deletion.
    synchronized (getCollectableServices()) {
        CollectableService cSvc = null;
        ListIterator<CollectableService> liter = getCollectableServices().listIterator();
        while (liter.hasNext()) {
            cSvc = liter.next();

            // Only interested in entries with matching nodeId, IP address
            // and service
            InetAddress addr = (InetAddress) cSvc.getAddress();

            //WATCH the brackets; there used to be an extra close bracket after the ipAddr comparison which borked this whole expression
            if (!(cSvc.getNodeId() == nodeId && addr.getHostName().equals(ipAddr)
                    && cSvc.getServiceName().equals(svcName))) {
                continue;
            }

            synchronized (cSvc) {
                // Retrieve the CollectorUpdates object associated with
                // this CollectableService if one exists.
                CollectorUpdates updates = cSvc.getCollectorUpdates();

                // Now set the update's deletion flag so the next
                // time it is selected for execution by the scheduler
                // the collection will be skipped and the service will not
                // be rescheduled.
                LOG.debug(
                        "Marking CollectableService for deletion because a service was deleted:  Service nodeid={}, deleted node:{}, "
                                + "service address:{}, deleted interface:{}, service servicename:{}, deleted service name:{}, event source {}",
                        cSvc.getNodeId(), nodeId, addr.getHostName(), ipAddr, cSvc.getServiceName(), svcName,
                        event.getSource());
                updates.markForDeletion();
            }

            // Now safe to remove the collectable service from
            // the collectable services list
            liter.remove();
        }
    }

    LOG.debug("serviceDeletedHandler: processing of serviceDeleted event for {}/{}/{} completed.", nodeId,
            ipAddr, svcName);
}

From source file:org.opennms.ng.services.collectd.Collectd.java

/**
 * Process the 'primarySnmpInterfaceChanged' event. Extract the old and
 * new primary SNMP interface addresses from the event parms. Any
 * CollectableService objects located in the collectable services list
 * which match the IP address of the old primary interface and have a
 * service name of "SNMP" are flagged for deletion. This will ensure that
 * the old primary interface is no longer collected against. Finally the
 * new primary SNMP interface is scheduled. The packages are examined and
 * new CollectableService objects are created, initialized and scheduled
 * for collection.//from w  w  w . j  a v  a  2s  .c  o  m
 *
 * @param event The event to process.
 * @throws InsufficientInformationException
 */
private void handlePrimarySnmpInterfaceChanged(Event event) throws InsufficientInformationException {
    EventUtils.checkNodeId(event);
    EventUtils.checkInterface(event);

    LOG.debug("primarySnmpInterfaceChangedHandler:  processing primary SNMP interface changed event...");

    // Currently only support SNMP data collection.
    //
    if (!event.getService().equals("SNMP")) {
        return;
    }

    // Extract the old and new primary SNMP interface addresses from the
    // event parms.
    //
    String oldPrimaryIfAddr = null;
    String parmName = null;
    Value parmValue = null;
    String parmContent = null;

    for (Parm parm : event.getParmCollection()) {
        parmName = parm.getParmName();
        parmValue = parm.getValue();
        if (parmValue == null) {
            continue;
        } else {
            parmContent = parmValue.getContent();
        }

        // old primary SNMP interface (optional parameter)
        if (parmName.equals(EventConstants.PARM_OLD_PRIMARY_SNMP_ADDRESS)) {
            oldPrimaryIfAddr = parmContent;
        }
    }

    if (oldPrimaryIfAddr != null) {
        // Mark the service for deletion so that it will not be
        // rescheduled
        // for
        // collection.
        //
        // Iterate over the CollectableService objects in the service
        // updates map
        // and mark any which have the same interface address as the old
        // primary SNMP interface and a service name of "SNMP" for
        // deletion.
        //
        synchronized (getCollectableServices()) {
            CollectableService cSvc = null;
            ListIterator<CollectableService> liter = getCollectableServices().listIterator();
            while (liter.hasNext()) {
                cSvc = liter.next();

                final InetAddress addr = (InetAddress) cSvc.getAddress();
                final String addrString = str(addr);
                if (addrString != null && addrString.equals(oldPrimaryIfAddr)) {
                    synchronized (cSvc) {
                        // Got a match! Retrieve the CollectorUpdates
                        // object
                        // associated
                        // with this CollectableService.
                        CollectorUpdates updates = cSvc.getCollectorUpdates();

                        // Now set the deleted flag
                        updates.markForDeletion();
                        LOG.debug("primarySnmpInterfaceChangedHandler: marking {} as deleted for service SNMP.",
                                oldPrimaryIfAddr);
                    }

                    // Now safe to remove the collectable service from
                    // the collectable services list
                    liter.remove();
                }
            }
        }
    }

    // Now we can schedule the new service...
    //
    scheduleForCollection(event);

    LOG.debug(
            "primarySnmpInterfaceChangedHandler: processing of primarySnmpInterfaceChanged event for nodeid {} completed.",
            event.getNodeid());
}

From source file:de.unijena.bioinf.FragmentationTreeConstruction.computation.FragmentationPatternAnalysis.java

/**
 * Step 6: Decomposition//from   www. j  av  a 2 s.c  om
 * Decompose each peak as well as the parent peak
 */
public ProcessedInput performDecomposition(ProcessedInput input) {
    final FormulaConstraints constraints = input.getMeasurementProfile().getFormulaConstraints();
    final Ms2Experiment experiment = input.getExperimentInformation();
    final Deviation parentDeviation = input.getMeasurementProfile().getAllowedMassDeviation();
    // sort again...
    final ArrayList<ProcessedPeak> processedPeaks = new ArrayList<ProcessedPeak>(input.getMergedPeaks());
    Collections.sort(processedPeaks, new ProcessedPeak.MassComparator());
    final ProcessedPeak parentPeak = processedPeaks.get(processedPeaks.size() - 1);
    // decompose peaks
    final PeakAnnotation<DecompositionList> decompositionList = input
            .getOrCreatePeakAnnotation(DecompositionList.class);
    final MassToFormulaDecomposer decomposer = decomposers.getDecomposer(constraints.getChemicalAlphabet());
    final Ionization ion = experiment.getPrecursorIonType().getIonization();
    final Deviation fragmentDeviation = input.getMeasurementProfile().getAllowedMassDeviation();
    final List<MolecularFormula> pmds = decomposer.decomposeToFormulas(
            experiment.getPrecursorIonType().subtractIonAndAdduct(parentPeak.getOriginalMz()), parentDeviation,
            constraints);
    // add adduct to molecular formula of the ion - because the adduct might get lost during fragmentation
    {
        final MolecularFormula adduct = experiment.getPrecursorIonType().getAdduct();
        final ListIterator<MolecularFormula> iter = pmds.listIterator();
        while (iter.hasNext()) {
            final MolecularFormula f = iter.next();
            iter.set(f.add(adduct));
        }
    }
    decompositionList.set(parentPeak, DecompositionList.fromFormulas(pmds));
    int j = 0;
    for (ProcessedPeak peak : processedPeaks.subList(0, processedPeaks.size() - 1)) {
        peak.setIndex(j++);
        decompositionList.set(peak, DecompositionList.fromFormulas(
                decomposer.decomposeToFormulas(peak.getUnmodifiedMass(), fragmentDeviation, constraints)));
    }
    parentPeak.setIndex(processedPeaks.size() - 1);
    assert parentPeak == processedPeaks.get(processedPeaks.size() - 1);
    // important: for each two peaks which are within 2*massrange:
    //  => make decomposition list disjoint
    final Deviation window = fragmentDeviation.multiply(2);
    for (int i = 1; i < processedPeaks.size() - 1; ++i) {
        if (window.inErrorWindow(processedPeaks.get(i).getMz(), processedPeaks.get(i - 1).getMz())) {
            final HashSet<MolecularFormula> right = new HashSet<MolecularFormula>(
                    decompositionList.get(processedPeaks.get(i)).getFormulas());
            final ArrayList<MolecularFormula> left = new ArrayList<MolecularFormula>(
                    decompositionList.get(processedPeaks.get(i - 1)).getFormulas());
            final double leftMass = ion.subtractFromMass(processedPeaks.get(i - 1).getMass());
            final double rightMass = ion.subtractFromMass(processedPeaks.get(i).getMass());
            final Iterator<MolecularFormula> leftIter = left.iterator();
            while (leftIter.hasNext()) {
                final MolecularFormula leftFormula = leftIter.next();
                if (right.contains(leftFormula)) {
                    if (Math.abs(leftFormula.getMass() - leftMass) < Math
                            .abs(leftFormula.getMass() - rightMass)) {
                        right.remove(leftFormula);
                    } else {
                        leftIter.remove();
                    }
                }
            }
            decompositionList.set(processedPeaks.get(i - 1), DecompositionList.fromFormulas(left));
            decompositionList.set(processedPeaks.get(i), DecompositionList.fromFormulas(right));
        }
    }

    return postProcess(PostProcessor.Stage.AFTER_DECOMPOSING, input);
}

From source file:javazoom.jlgui.player.amp.PlayerUI.java

/**
 * Play files from a list.//from  w ww  .ja  va2  s  . c om
 * @param files
 */
protected void playFiles(List files) {
    if (files.size() > 0) {
        // Clean the playlist.
        playlist.removeAllItems();
        // Add all dropped files to playlist.
        ListIterator li = files.listIterator();
        while (li.hasNext()) {
            File file = (File) li.next();
            PlaylistItem pli = null;
            if (file != null) {
                pli = new PlaylistItem(file.getName(), file.getAbsolutePath(), -1, true);
                if (pli != null)
                    playlist.appendItem(pli);
            }
        }
        // Start the playlist from the top.
        playlist.nextCursor();
        playlistUI.initPlayList();
        setCurrentSong(playlist.getCursor());
    }
}

From source file:net.sourceforge.msscodefactory.cfasterisk.v2_4.CFAsteriskOracle.CFAsteriskOracleProjectBaseTable.java

public CFInternetProjectBaseBuff[] readDerivedByTenantIdx(CFSecurityAuthorization Authorization,
        long TenantId) {
    final String S_ProcName = "readDerivedByTenantIdx";
    if (!schema.isTransactionOpen()) {
        throw CFLib.getDefaultExceptionFactory().newUsageException(getClass(), S_ProcName,
                "Transaction not open");
    }//  w  w w. ja  v  a  2 s .  c om

    ArrayList<String> classCodeList = new ArrayList<String>();
    String classCode;
    ResultSet resultSet = null;
    CallableStatement stmtReadClassCodeByTenantIdx = null;
    try {
        Connection cnx = schema.getCnx();
        stmtReadClassCodeByTenantIdx = cnx.prepareCall("begin " + schema.getLowerDbSchemaName()
                + ".rd_bprjdefccbytenantidx( ?, ?, ?, ?, ?, ?" + ", " + "?" + " ); end;");
        int argIdx = 1;
        stmtReadClassCodeByTenantIdx.registerOutParameter(argIdx++, OracleTypes.CURSOR);
        stmtReadClassCodeByTenantIdx.setLong(argIdx++,
                (Authorization == null) ? 0 : Authorization.getSecClusterId());
        stmtReadClassCodeByTenantIdx.setString(argIdx++,
                (Authorization == null) ? "" : Authorization.getSecUserId().toString());
        stmtReadClassCodeByTenantIdx.setString(argIdx++,
                (Authorization == null) ? "" : Authorization.getSecSessionId().toString());
        stmtReadClassCodeByTenantIdx.setLong(argIdx++,
                (Authorization == null) ? 0 : Authorization.getSecClusterId());
        stmtReadClassCodeByTenantIdx.setLong(argIdx++,
                (Authorization == null) ? 0 : Authorization.getSecTenantId());
        stmtReadClassCodeByTenantIdx.setLong(argIdx++, TenantId);
        stmtReadClassCodeByTenantIdx.execute();
        resultSet = (ResultSet) stmtReadClassCodeByTenantIdx.getObject(1);
        if (resultSet != null) {
            try {
                while (resultSet.next()) {
                    classCode = resultSet.getString(1);
                    classCodeList.add(classCode);
                }
            } catch (SQLException e) {
            }
        }
    } catch (SQLException e) {
        throw CFLib.getDefaultExceptionFactory().newDbException(getClass(), S_ProcName, e);
    } finally {
        if (resultSet != null) {
            try {
                resultSet.close();
            } catch (SQLException e) {
            }
            resultSet = null;
        }
        if (stmtReadClassCodeByTenantIdx != null) {
            try {
                stmtReadClassCodeByTenantIdx.close();
            } catch (SQLException e) {
            }
            stmtReadClassCodeByTenantIdx = null;
        }
    }
    List<CFInternetProjectBaseBuff> resultList = new LinkedList<CFInternetProjectBaseBuff>();
    ListIterator<String> classCodeIter = classCodeList.listIterator();
    while (classCodeIter.hasNext()) {
        classCode = classCodeIter.next();
        if (classCode.equals("BPRJ")) {
            CFInternetProjectBaseBuff[] subList = readBuffByTenantIdx(Authorization, TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("RPRJ")) {
            CFInternetRealProjectBuff[] subList = schema.getTableRealProject()
                    .readBuffByTenantIdx(Authorization, TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("TPRJ")) {
            CFInternetTopProjectBuff[] subList = schema.getTableTopProject().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("SPRJ")) {
            CFInternetSubProjectBuff[] subList = schema.getTableSubProject().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("VERN")) {
            CFInternetVersionBuff[] subList = schema.getTableVersion().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("MJVR")) {
            CFInternetMajorVersionBuff[] subList = schema.getTableMajorVersion()
                    .readBuffByTenantIdx(Authorization, TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("MNVR")) {
            CFInternetMinorVersionBuff[] subList = schema.getTableMinorVersion()
                    .readBuffByTenantIdx(Authorization, TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else {
            throw CFLib.getDefaultExceptionFactory().newRuntimeException(getClass(), S_ProcName,
                    "Did not expect ClassCode \"" + classCode + "\"");
        }
    }
    int idx = 0;
    CFInternetProjectBaseBuff[] retBuff = new CFInternetProjectBaseBuff[resultList.size()];
    Iterator<CFInternetProjectBaseBuff> iter = resultList.iterator();
    while (iter.hasNext()) {
        retBuff[idx++] = iter.next();
    }
    return (retBuff);
}

From source file:net.sourceforge.msscodefactory.cfacc.v2_0.CFAccOracle.CFAccOracleProjectBaseTable.java

public CFAccProjectBaseBuff[] readDerivedByTenantIdx(CFAccAuthorization Authorization, long TenantId) {
    final String S_ProcName = "readDerivedByTenantIdx";
    if (!schema.isTransactionOpen()) {
        throw CFLib.getDefaultExceptionFactory().newUsageException(getClass(), S_ProcName,
                "Transaction not open");
    }/*from   www  . j a v a 2 s  . com*/

    ArrayList<String> classCodeList = new ArrayList<String>();
    String classCode;
    ResultSet resultSet = null;
    CallableStatement stmtReadClassCodeByTenantIdx = null;
    try {
        Connection cnx = schema.getCnx();
        stmtReadClassCodeByTenantIdx = cnx.prepareCall("begin " + schema.getLowerSchemaDbName()
                + ".rd_bprjdefccbytenantidx( ?, ?, ?, ?, ?, ?" + ", " + "?" + " ); end;");
        int argIdx = 1;
        stmtReadClassCodeByTenantIdx.registerOutParameter(argIdx++, OracleTypes.CURSOR);
        stmtReadClassCodeByTenantIdx.setLong(argIdx++,
                (Authorization == null) ? 0 : Authorization.getSecClusterId());
        stmtReadClassCodeByTenantIdx.setString(argIdx++,
                (Authorization == null) ? "" : Authorization.getSecUserId().toString());
        stmtReadClassCodeByTenantIdx.setString(argIdx++,
                (Authorization == null) ? "" : Authorization.getSecSessionId().toString());
        stmtReadClassCodeByTenantIdx.setLong(argIdx++,
                (Authorization == null) ? 0 : Authorization.getSecClusterId());
        stmtReadClassCodeByTenantIdx.setLong(argIdx++,
                (Authorization == null) ? 0 : Authorization.getSecTenantId());
        stmtReadClassCodeByTenantIdx.setLong(argIdx++, TenantId);
        stmtReadClassCodeByTenantIdx.execute();
        resultSet = (ResultSet) stmtReadClassCodeByTenantIdx.getObject(1);
        if (resultSet != null) {
            try {
                while (resultSet.next()) {
                    classCode = resultSet.getString(1);
                    classCodeList.add(classCode);
                }
            } catch (SQLException e) {
            }
        }
    } catch (SQLException e) {
        throw CFLib.getDefaultExceptionFactory().newDbException(getClass(), S_ProcName, e);
    } finally {
        if (resultSet != null) {
            try {
                resultSet.close();
            } catch (SQLException e) {
            }
            resultSet = null;
        }
        if (stmtReadClassCodeByTenantIdx != null) {
            try {
                stmtReadClassCodeByTenantIdx.close();
            } catch (SQLException e) {
            }
            stmtReadClassCodeByTenantIdx = null;
        }
    }
    List<CFAccProjectBaseBuff> resultList = new LinkedList<CFAccProjectBaseBuff>();
    ListIterator<String> classCodeIter = classCodeList.listIterator();
    while (classCodeIter.hasNext()) {
        classCode = classCodeIter.next();
        if (classCode.equals("BPRJ")) {
            CFAccProjectBaseBuff[] subList = readBuffByTenantIdx(Authorization, TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("RPRJ")) {
            CFAccRealProjectBuff[] subList = schema.getTableRealProject().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("TPRJ")) {
            CFAccTopProjectBuff[] subList = schema.getTableTopProject().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("SPRJ")) {
            CFAccSubProjectBuff[] subList = schema.getTableSubProject().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("VERN")) {
            CFAccVersionBuff[] subList = schema.getTableVersion().readBuffByTenantIdx(Authorization, TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("MJVR")) {
            CFAccMajorVersionBuff[] subList = schema.getTableMajorVersion().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else if (classCode.equals("MNVR")) {
            CFAccMinorVersionBuff[] subList = schema.getTableMinorVersion().readBuffByTenantIdx(Authorization,
                    TenantId);
            for (int subListIdx = 0; subListIdx < subList.length; subListIdx++) {
                resultList.add(subList[subListIdx]);
            }
        } else {
            throw CFLib.getDefaultExceptionFactory().newRuntimeException(getClass(), S_ProcName,
                    "Did not expect ClassCode \"" + classCode + "\"");
        }
    }
    int idx = 0;
    CFAccProjectBaseBuff[] retBuff = new CFAccProjectBaseBuff[resultList.size()];
    Iterator<CFAccProjectBaseBuff> iter = resultList.iterator();
    while (iter.hasNext()) {
        retBuff[idx++] = iter.next();
    }
    return (retBuff);
}