Example usage for java.util List set

Introduction

In this page you can find the example usage for java.util List set.

Prototype

E set(int index, E element);

Source Link

Document

Replaces the element at the specified position in this list with the specified element (optional operation).

Usage

From source file:org.callimachusproject.auth.DetachedRealm.java

private List<String> getDistinctRealm(String domains) {
    List<String> realms = new ArrayList<String>();
    if (domains.contains(" ")) {
        loop: for (String url : domains.split("\\s+")) {
            if (url.length() > 0) {
                for (int i = 0, n = realms.size(); i < n; i++) {
                    String pre = realms.get(i);
                    if (pre == null || pre.startsWith(url)) {
                        realms.set(i, url);
                        continue loop;
                    } else if (url.startsWith(pre)) {
                        continue loop;
                    }/*from ww  w  . j a  v  a 2s .  c  o  m*/
                }
                realms.add(url);
            }
        }
        return realms;
    } else {
        return Collections.singletonList(domains);
    }
}

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From source file:com.t_oster.liblasercut.drivers.LaosCutter.java

/**
 * This Method takes a raster-line represented by a list of bytes,
 * where: byte0 ist the left-most byte, in one byte, the MSB is the
 * left-most bit, 0 representing laser off, 1 representing laser on.
 * The Output List of longs, where each value is the unsigned dword
 * of 4 bytes of the input each, where the first dword is the leftmost
 * dword and the LSB is the leftmost bit. If outputLeftToRight is false,
 * the first dword is the rightmost dword and the LSB of each dword is the
 * the Output is padded with zeroes on the right side, if leftToRight is true,
 * on the left-side otherwise//  w w w .ja va2 s.c  o m
 * rightmost bit
 * @param line
 * @param outputLeftToRight
 * @return
 */
public List<Long> byteLineToDwords(List<Byte> line, boolean outputLeftToRight) {
    List<Long> result = new ArrayList<Long>();
    int s = line.size();
    for (int i = 0; i < s; i++) {
        line.set(i, (byte) (Integer.reverse(0xFF & line.get(i)) >>> 24));
    }
    for (int i = 0; i < s; i += 4) {
        result.add((((long) (i + 3 < s ? 0xFF & line.get(i + 3) : 0)) << 24)
                + (((long) (i + 2 < s ? 0xFF & line.get(i + 2) : 0)) << 16)
                + (((long) (i + 1 < s ? 0xFF & line.get(i + 1) : 0)) << 8) + ((long) (0xFF & line.get(i))));
    }
    if (!outputLeftToRight) {
        Collections.reverse(result);
        for (int i = 0; i < result.size(); i++) {
            result.set(i, Long.reverse(result.get(i)) >>> 32);
        }
    }
    return result;
}

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From source file:com.xpn.xwiki.objects.classes.DBTreeListClass.java

private void mergeItems(List<ListItem> itemPath, List<List<ListItem>> resList) {
    if (itemPath == null || itemPath.size() == 0) {
        return;//from  w ww  .  j av a 2  s .  c  om
    }

    for (int i = 0; i < resList.size(); i++) {
        List<ListItem> items = resList.get(i);
        if (items.size() < itemPath.size()) {
            ListItem item1 = items.get(items.size() - 1);
            ListItem item2 = itemPath.get(items.size() - 1);
            if (item1.equals(item2)) {
                resList.set(i, itemPath);
                return;
            }
        } else {
            ListItem item1 = items.get(itemPath.size() - 1);
            ListItem item2 = itemPath.get(itemPath.size() - 1);
            if (item1.equals(item2)) {
                return;
            }
        }
    }
    resList.add(itemPath);
}

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From source file:io.hops.experiments.results.compiler.RawBMResultAggregator.java

CompiledResults processAllRecords() {
    CompiledResults cr = new CompiledResults();

    System.out.println("Generating compiled results for RAW Benchmarks");
    if (allResults.isEmpty()) {
        return cr;
    }/*from   w  w w  .j  a va 2  s  .  co m*/

    SortedSet<Integer> sorted = new TreeSet<Integer>(); // Sort my number of NN
    sorted.addAll(allResults.keySet());
    for (Integer key : sorted) {
        cr.nnCounts.add(key);
        Map<BenchmarkOperations, RawAggregate> map = allResults.get(key);
        for (BenchmarkOperations op : map.keySet()) {
            RawAggregate agg = map.get(op);
            List<Double> vals = cr.valsMap.get(op);
            if (vals == null) {
                vals = new ArrayList<Double>();
                cr.valsMap.put(op, vals);
            }
            vals.add(agg.getSpeed());
        }
    }
    //create histogram
    for (BenchmarkOperations op : cr.valsMap.keySet()) {
        List<Double> vals = cr.valsMap.get(op);
        Double max = new Double(0);
        for (int i = 0; i < vals.size(); i++) {
            if (i > 0) {
                if (vals.get(i) < max) {
                    vals.set(i, max);
                }
            }
            max = vals.get(i);
        }
    }

    //create histogram
    for (BenchmarkOperations op : cr.valsMap.keySet()) {
        List<Double> vals = cr.valsMap.get(op);
        List<Double> histo = cr.histoMap.get(op);
        if (histo == null) {
            histo = new ArrayList<Double>();
            cr.histoMap.put(op, histo);
        }
        Double previousVal = null;
        for (Double val : vals) {
            double diff = 0;
            if (previousVal == null) {
                previousVal = val;
                diff = val;
            } else {
                diff = (val - previousVal);
                if (diff < 0) {
                    diff = 0;
                }
                previousVal = val;
            }
            histo.add(diff);
        }
    }

    return cr;
}

---

From source file:edu.scripps.fl.pubchem.PubChemXMLParserFactory.java

protected void populateAssayResultsFromXML(PCAssay assay, Node assayDescriptionNode) throws Exception {
    List<PCAssayResult> results = null;
    List<Node> assayResultNodes = assayDescriptionNode
            .selectNodes("../../../PC-AssaySubmit_data/PC-AssayResults");
    if (assayResultNodes.size() == 0)
        return;// w  w  w.  j a v  a  2 s .c om
    else
        results = new ArrayList<PCAssayResult>(assayResultNodes.size());

    List<PCAssayColumn> testedCols = assay.getTestedColumns();
    PCAssayColumn activeColumn = assay.getActiveColumn();

    for (Node resultNode : assayResultNodes) {
        PCAssayResult result = new PCAssayResult();

        String val = resultNode.selectSingleNode("PC-AssayResults_sid").valueOf("text()");
        result.setSID(Long.parseLong(val));

        val = resultNode.selectSingleNode("PC-AssayResults_outcome").valueOf("@value");
        val = val.substring(0, 1).toUpperCase() + val.substring(1);
        result.setOutcome(val);

        val = resultNode.selectSingleNode("PC-AssayResults_rank").valueOf("text()");
        result.setRankScore(Integer.parseInt(val));

        List<Node> assayDataNodes = resultNode.selectNodes("PC-AssayResults_data/PC-AssayData");

        List<String> all = GrowthList.decorate(new ArrayList(assay.getColumns().size() - 2));
        result.setAllValues(all);
        for (Node node : assayDataNodes) {
            val = node.valueOf("PC-AssayData_tid/text()");
            int index = Integer.parseInt(val) - 1;
            val = node.selectSingleNode(".//*[starts-with(name(),'PC-AssayData_value_')]").getText();
            all.set(index, val);
        }

        // if a dose response assay with a marked activeConcentration
        if ("confirmatory".equals(assay.getActivityOutcomeMethod()) && activeColumn != null) {
            String actConc = all.get(activeColumn.getTID() - 1);
            if (null != actConc && !"".equals(actConc)) {
                result.setPrimaryValue(Double.valueOf(actConc));
                result.setPrimaryColumn(activeColumn);

                PCAssayColumn qualCol = assay.getQualifierColumn();
                if (qualCol != null) {
                    String qual = all.get(qualCol.getTID() - 1);
                    if (!"".equals(qual))
                        result.setQualifier(qual);
                }
            }

        } else if ("screening".equals(assay.getActivityOutcomeMethod()) && testedCols.size() > 0) {
            PCAssayColumn testedCol = testedCols.get(0);
            String value = all.get(testedCol.getTID() - 1);
            result.setPrimaryColumn(testedCol);
            if (null != value && !"".equals(value))
                if ("float".equals(testedCol.getType()) || "int".equals(testedCol.getType()))
                    result.setPrimaryValue(Double.parseDouble(value));
                else
                    result.setPrimaryValueAsString(value);
        }

        // put all testedConcentration columns into an ordered array. Interested in numbers here only.
        result.getTestedValues().clear();
        for (int ii = 0; ii < testedCols.size(); ii++) {
            PCAssayColumn testedCol = testedCols.get(ii);
            String value = all.get(testedCol.getTID() - 1);
            if (null != value && !"".equals(value)) {
                try {
                    Double dbl = Double.parseDouble(value);
                    result.getTestedValues().set(ii, dbl);
                } catch (NumberFormatException ex) {
                    // if not a number then don't worry about it.
                }
            }
        }
        assay.getResults().add(result);
    }

}

---

From source file:hoot.services.controllers.job.ReviewResourceMarkTest.java

@Test
@Category(UnitTest.class)
public void testMarkItemReviewedAgainstInvalidReviewAgainstItem() throws Exception {
    //If an item is marked as reviewed against something it wasn't supposed to be reviewed against
    //in the services database, we don't fail.  A warning is logged only.
    ReviewTestUtils.createPreparedData(resource());

    //add an additional reviewed item that is invalid b/c its review against item is incorrect
    ReviewedItems reviewedItems = ReviewTestUtils.createReviewedItems();
    ReviewedItem[] reviewedItemsArr = reviewedItems.getReviewedItems();
    List<ReviewedItem> reviewedItemsList = new ArrayList<ReviewedItem>(Arrays.asList(reviewedItemsArr));
    ReviewedItem invalidReviewedItem = reviewedItemsList.get(0);
    //set item to be reviewed against itself
    invalidReviewedItem.setReviewedAgainstId(ReviewTestUtils.nodeIds.get((long) -64));
    invalidReviewedItem.setReviewedAgainstType(ElementType.Node.toString().toLowerCase());
    reviewedItemsList.set(0, invalidReviewedItem);
    reviewedItemsArr = reviewedItemsList.toArray(new ReviewedItem[] {});
    reviewedItems.setReviewedItems(reviewedItemsArr);

    MarkItemsReviewedRequest markItemsReviewedRequest = new MarkItemsReviewedRequest();
    markItemsReviewedRequest.setReviewedItems(ReviewTestUtils.createReviewedItems());
    markItemsReviewedRequest.setReviewedItemsChangeset(
            XmlDocumentBuilder.toString(ReviewTestUtils.createReviewedItemsChangeset()));

    //the request should fail and nothing should be written
    try {//from   w  w  w.  j av  a  2s.com
        execMark(String.valueOf(mapId), String.valueOf(false), markItemsReviewedRequest);
    } catch (UniformInterfaceException e) {
        Assert.assertEquals(Status.BAD_REQUEST.getStatusCode(), e.getResponse().getStatus());
        Assert.assertTrue(e.getResponse().getEntity(String.class).contains("Error parsing unique ID tag"));

        ReviewTestUtils.verifyDataNotMarkedAsReviewed();

        throw e;
    }
}

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From source file:com.constellio.app.services.appManagement.AppManagementService.java

private void updateWrapperConf(File deployFolder) {

    LOGGER.info("New webapp path is '" + deployFolder.getAbsolutePath() + "'");
    File wrapperConf = foldersLocator.getWrapperConf();
    if (foldersLocator.getFoldersLocatorMode().equals(FoldersLocatorMode.PROJECT) && !wrapperConf.exists()) {
        return;/*from   w  ww  .ja v  a2s  .co m*/
    }
    List<String> lines = fileService.readFileToLinesWithoutExpectableIOException(wrapperConf);
    for (int i = 0; i < lines.size(); i++) {

        String line = lines.get(i);
        if (line.startsWith("wrapper.java.classpath.2=")) {
            lines.set(i, "wrapper.java.classpath.2=" + deployFolder.getAbsolutePath() + "/WEB-INF/lib/*.jar");
        }
        if (line.startsWith("wrapper.java.classpath.3=")) {
            lines.set(i, "wrapper.java.classpath.3=" + deployFolder.getAbsolutePath() + "/WEB-INF/classes");
        }
        if (line.startsWith("wrapper.commandfile=")) {
            lines.set(i, "wrapper.commandfile=" + deployFolder.getAbsolutePath() + "/WEB-INF/command/cmd");
        }
    }
    fileService.writeLinesToFile(wrapperConf, lines);
}

---

From source file:org.shredzone.cilla.admin.page.gallery.GalleryBean.java

/**
 * Moves a picture within the picture list.
 *
 * @param picture//from   w  w  w . j av  a2 s.  c  o m
 *            {@link PictureDto} to be moved
 * @param relative
 *            Relative new position of the picture
 */
public void moveImage(PictureDto picture, int relative) {
    synchronized (this) {
        List<PictureDto> list = section.getPictures();

        int current = list.indexOf(picture);
        if (current < 0) {
            return;
        }

        int target = current + relative;
        if (target < 0) {
            // Item moved out from the left, wrap around
            PictureDto wrap = list.remove(current);
            list.add(list.size() + 1 + target, wrap);

        } else if (target >= list.size()) {
            // Item moved out from the right, wrap around
            PictureDto wrap = list.remove(current);
            list.add(target - list.size() - 1, wrap);

        } else {
            // No wrap-around: just swap the items
            PictureDto swap = list.get(target);
            list.set(target, picture);
            list.set(current, swap);
        }
    }
}

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From source file:edu.utah.further.core.query.domain.SearchCriterionTo.java

/**
 * @param parameters/*w w w  . j a  va 2s.  co m*/
 * @return
 */
private SearchCriterionTo setParameters(final List<?> parameters) {
    if (parameters == null) {
        this.parameters = null;
    } else {
        //Would like to have used XMLTypeAdapter on parameters but can't
        //http://java.net/jira/browse/JAXB-359
        //http://www.java.net/node/665119
        final List<Object> params = newList(parameters);
        for (int i = 0; i < params.size(); i++) {
            if (ReflectionUtil.instanceOf(params.get(i), XMLGregorianCalendar.class)) {
                final Date date = ((XMLGregorianCalendar) params.get(i)).toGregorianCalendar().getTime();
                params.set(i, date);
            }
        }

        this.parameters = params;
    }
    return this;
}

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From source file:org.wallerlab.yoink.cube.service.CubeBuilderImpl.java

private List<Coord> getAllCoordinates(Cube cube) {
    Coord[] initialValues = new SimpleCoord[cube.getSize()];
    List<Coord> coordinates = Collections.synchronizedList(Arrays.asList(initialValues));
    IntStream.range(0, cube.getNumberOfXYZSteps()[0]).parallel().forEach(nXStep -> {
        for (int nYStep = 0; nYStep < cube.getNumberOfXYZSteps()[1]; nYStep++) {
            for (int nZStep = 0; nZStep < cube.getNumberOfXYZSteps()[2]; nZStep++) {
                // get the coordinate in cube
                int[] xyzCurrentStep = new int[] { nXStep, nYStep, nZStep };
                Coord currentCoord = coordInCubeCalculator.calculate(xyzCurrentStep, cube);
                // get the index of a grid point in cube
                int indexInCube = nXStep * cube.getNumberOfXYZSteps()[1] * cube.getNumberOfXYZSteps()[2]
                        + nYStep * cube.getNumberOfXYZSteps()[2] + nZStep;
                coordinates.set(indexInCube, currentCoord);
            }/*from  w  w  w  . j a v a2 s.c  o m*/
        }
    });
    return coordinates;
}

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