Example usage for java.util ArrayList subList

Introduction

In this page you can find the example usage for java.util ArrayList subList.

Prototype

public List<E> subList(int fromIndex, int toIndex) 

Source Link

Document

Returns a view of the portion of this list between the specified fromIndex , inclusive, and toIndex , exclusive.

Usage

From source file:ubic.gemma.core.loader.association.phenotype.OmimDatabaseImporterCli.java

private Map<Long, Collection<Long>> populateOmimIdsToPubmeds(Set<Long> allOmimId) throws InterruptedException {

    // omimID --> all list of publications
    HashMap<Long, Collection<Long>> omimIdToPubmeds = new HashMap<>();

    // HashSet to ArrayList, so no duplicate but can use list methods
    // allOmimId contains all OMIM id (phenotype and gene)
    ArrayList<Long> allOmimIdList = new ArrayList<>(allOmimId);

    int i = 0;/*from ww  w .  j av a  2s.  c  o m*/

    while (i < allOmimIdList.size()) {

        int j = i + 10;

        if (j > allOmimIdList.size()) {
            j = allOmimIdList.size();
        }

        // each List can have a max size of 10, divide allOmimIdList into many lists
        List<Long> listWithLimitSize10 = allOmimIdList.subList(i, j);

        // call the api limiting the request to 10 Omim id and populates omimIdToPubmeds
        OmimAnnotatorClient.findLinkedPublications(listWithLimitSize10, omimIdToPubmeds);

        i = j;
    }

    return omimIdToPubmeds;
}

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From source file:pathwaynet.PathwayCalculator.java

private <T> ArrayList<HashSet<T>> generatePermutatedGroups(Collection<T> allComponents, int groupSize) {
    ArrayList<HashSet<T>> componentsInGroupPermutations = new ArrayList<>();
    for (int i = 0; i < numPermutations; i++) {
        HashSet<T> componentsThisPermut = new HashSet<>();
        ArrayList<T> componentsInPathway = new ArrayList<>();
        componentsInPathway.addAll(allComponents);
        Collections.shuffle(componentsInPathway);
        componentsThisPermut.addAll(componentsInPathway.subList(0, groupSize));

        componentsInGroupPermutations.add(componentsThisPermut);
    }//from w ww  .  j  a va2  s .  c o  m
    return componentsInGroupPermutations;
}

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From source file:qa.experiment.SRLPerProcessModelCrossValidation.java

public void doCrossValidation(String processName, ArrayList<ProcessFrame> selectedProcessFrame, int foldSize)
        throws IOException, InterruptedException, FileNotFoundException, NoSuchMethodException,
        IllegalAccessException, IllegalArgumentException, InvocationTargetException {
    int startIdx = 0;
    int testSize = selectedProcessFrame.size() / foldSize;
    int endIdx = testSize;
    for (int currentFold = 0; currentFold < foldSize; currentFold++) {
        ArrayList<ProcessFrame> testingFrames = new ArrayList<ProcessFrame>(
                selectedProcessFrame.subList(startIdx, endIdx));
        ArrayList<ProcessFrame> trainingFrames = new ArrayList<ProcessFrame>(
                selectedProcessFrame.subList(0, startIdx));
        trainingFrames.addAll(//  w w  w.j  a v  a 2  s .  c om
                new ArrayList<ProcessFrame>(selectedProcessFrame.subList(endIdx, selectedProcessFrame.size())));
        if (da) {
            GlobalV.sourceIdxStart = trainingFrames.size();
            trainingFrames.addAll(inverseData);
        }
        String trainingFileName = outDirName + "/" + processName + ".train.perprocess.cv." + currentFold;
        String testingFileName = outDirName + "/" + processName + ".test.cv." + currentFold;
        String modelName = outDirName + "/" + processName + ".perprocessmodel.cv." + currentFold;

        testFilePath.add(testingFileName);
        trainingModelFilePath.add(modelName);

        ProcessFrameUtil.toParserFormat(trainingFrames, trainingFileName, srlType);
        ProcessFrameUtil.toParserFormat(testingFrames, testingFileName, srlType);

        doTrain(trainingFileName, modelName);
        startIdx = endIdx;
        if (currentFold == foldSize - 2) {
            endIdx = selectedProcessFrame.size();
        } else {
            endIdx = startIdx + testSize;
        }
    }
}

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From source file:jp.alessandro.android.iab.ItemGetter.java

/**
 * In your application, you can query the item details from Google Play using the In-app Billing Version 3 API.
 * To pass a request to the In-app Billing service, first create a Bundle that contains
 * a String ArrayList of product IDs with key "ITEM_ID_LIST",
 * where each string is a product ID for an purchasable item.
 * See https://developer.android.com/google/play/billing/billing_integrate.html#QueryDetails
 *
 * @param service  in-app billing service
 * @param itemType "inapp" or "subs"/*from   w w  w.  j av  a2 s . com*/
 * @param itemIds  contains the list of item ids that you want to request
 * @return
 * @throws BillingException
 */
ItemDetails get(IInAppBillingService service, String itemType, ArrayList<String> itemIds)
        throws BillingException {

    ItemDetails itemDetails = new ItemDetails();
    List<ArrayList<String>> splitItemIdList = new ArrayList<>();

    // There reason why it splits the item ids per request
    // It's because there is a known bug on Google Api
    // https://code.google.com/archive/p/marketbilling/issues/137
    for (int i = 0; i < itemIds.size(); i += ItemGetter.MAX_SKU_PER_REQUEST) {
        int fromIndex = i;
        int toIndex = Math.min(itemIds.size(), i + ItemGetter.MAX_SKU_PER_REQUEST);

        ArrayList<String> list = new ArrayList<>(itemIds.subList(fromIndex, toIndex));
        splitItemIdList.add(list);
    }

    for (ArrayList<String> splitItemIds : splitItemIdList) {
        try {
            Bundle itemIdsBundle = createBundleItemListFromArray(splitItemIds);
            Bundle skuDetails = service.getSkuDetails(mApiVersion, mPackageName, itemType, itemIdsBundle);
            List<String> detailList = getItemsFromResponse(skuDetails);
            putAll(detailList, itemDetails);

        } catch (RemoteException e) {
            throw new BillingException(Constants.ERROR_REMOTE_EXCEPTION, e.getMessage());
        }
    }
    return itemDetails;
}

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From source file:org.apache.hadoop.hbase.regionserver.compactions.SortedCompactionPolicy.java

protected ArrayList<StoreFile> getCurrentEligibleFiles(ArrayList<StoreFile> candidateFiles,
        final List<StoreFile> filesCompacting) {
    // candidates = all storefiles not already in compaction queue
    if (!filesCompacting.isEmpty()) {
        // exclude all files older than the newest file we're currently
        // compacting. this allows us to preserve contiguity (HBASE-2856)
        StoreFile last = filesCompacting.get(filesCompacting.size() - 1);
        int idx = candidateFiles.indexOf(last);
        Preconditions.checkArgument(idx != -1);
        candidateFiles.subList(0, idx + 1).clear();
    }/*from   w  ww . j ava 2  s  .c  o m*/
    return candidateFiles;
}

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From source file:net.sourceforge.fenixedu.presentationTier.Action.phd.CommonPhdIndividualProgramProcessDA.java

public ActionForward viewAlertMessages(ActionMapping mapping, ActionForm form, HttpServletRequest request,
        HttpServletResponse response) {/*from w w  w .  j  a  v a2s  .  c o  m*/

    TreeSet<PhdAlertMessage> orderedMessages = new TreeSet<PhdAlertMessage>(
            Collections.reverseOrder(PhdAlertMessage.COMPARATOR_BY_WHEN_CREATED_AND_ID));
    orderedMessages.addAll(getLoggedPerson(request).getPhdAlertMessagesSet());
    ArrayList<PhdAlertMessage> lastMessages = new ArrayList<PhdAlertMessage>();
    lastMessages.addAll(orderedMessages);

    request.setAttribute("unread", "false");
    request.setAttribute("alertMessages",
            lastMessages.subList(0, Math.min(lastMessages.size(), NUMBER_OF_LAST_MESSAGES)));
    request.setAttribute("tooManyMessages", (lastMessages.size() > NUMBER_OF_LAST_MESSAGES) ? "true" : "false");
    return mapping.findForward("viewAlertMessages");
}

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From source file:net.sourceforge.fenixedu.presentationTier.Action.phd.CommonPhdIndividualProgramProcessDA.java

public ActionForward viewProcessAlertMessages(ActionMapping mapping, ActionForm form,
        HttpServletRequest request, HttpServletResponse response) {

    TreeSet<PhdAlertMessage> orderedMessages = new TreeSet<PhdAlertMessage>(
            Collections.reverseOrder(PhdAlertMessage.COMPARATOR_BY_WHEN_CREATED_AND_ID));
    orderedMessages.addAll(getProcess(request).getAlertMessagesForLoggedPerson());
    ArrayList<PhdAlertMessage> lastMessages = new ArrayList<PhdAlertMessage>();
    lastMessages.addAll(orderedMessages);

    request.setAttribute("unread", "false");
    request.setAttribute("alertMessages",
            lastMessages.subList(0, Math.min(lastMessages.size(), NUMBER_OF_LAST_MESSAGES)));
    request.setAttribute("tooManyMessages", (lastMessages.size() > NUMBER_OF_LAST_MESSAGES) ? "true" : "false");
    return mapping.findForward("viewProcessAlertMessages");
}

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From source file:qa.experiment.SRLDSCombinedModelCrossValidation.java

public void doCrossValidation(String processName, ArrayList<ProcessFrame> selectedProcessFrame, int foldSize)
        throws IOException, InterruptedException, FileNotFoundException, NoSuchMethodException,
        IllegalAccessException, IllegalArgumentException, InvocationTargetException {
    int startIdx = 0;
    int testSize = selectedProcessFrame.size() / foldSize;
    int endIdx = testSize;
    for (int currentFold = 0; currentFold < foldSize; currentFold++) {
        ArrayList<ProcessFrame> testingFrames = new ArrayList<ProcessFrame>(
                selectedProcessFrame.subList(startIdx, endIdx));
        ArrayList<ProcessFrame> trainingFrames = new ArrayList<ProcessFrame>(
                selectedProcessFrame.subList(0, startIdx));
        trainingFrames.addAll(//from  w w  w.  ja va2 s  .c o m
                new ArrayList<ProcessFrame>(selectedProcessFrame.subList(endIdx, selectedProcessFrame.size())));
        trainingFrames.addAll(inverseData);
        trainingFrames.addAll(dsProc.getProcArr());

        String trainingFileName = outDirName + "/" + processName + ".train.dscombined.cv." + currentFold;
        String testingFileName = outDirName + "/" + processName + ".test.cv." + currentFold;
        String modelName = outDirName + "/" + processName + ".dscombinedmodel.cv." + currentFold;

        testFilePath.add(testingFileName);
        trainingModelFilePath.add(modelName);
        System.out.println(testingFileName);
        boolean train = false;
        if (!(new File(trainingFileName).exists())) {
            ProcessFrameUtil.toParserFormat(trainingFrames, trainingFileName, srlType);
            train = true;
        }
        if (!(new File(testingFileName).exists())) {
            ProcessFrameUtil.toParserFormat(testingFrames, testingFileName, srlType);
        }

        if (train) {
            doTrain(trainingFileName, modelName);
        }
        startIdx = endIdx;
        if (currentFold == foldSize - 2) {
            endIdx = selectedProcessFrame.size();
        } else {
            endIdx = startIdx + testSize;
        }
    }
}

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From source file:qa.experiment.SRLCombinedModelCrossValidation.java

public void doCrossValidation(String processName, ArrayList<ProcessFrame> selectedProcessFrame, int foldSize)
        throws IOException, InterruptedException, FileNotFoundException, NoSuchMethodException,
        IllegalAccessException, IllegalArgumentException, InvocationTargetException {
    int startIdx = 0;
    int testSize = selectedProcessFrame.size() / foldSize;
    int endIdx = testSize;
    for (int currentFold = 0; currentFold < foldSize; currentFold++) {
        ArrayList<ProcessFrame> testingFrames = new ArrayList<ProcessFrame>(
                selectedProcessFrame.subList(startIdx, endIdx));
        ArrayList<ProcessFrame> trainingFrames = new ArrayList<ProcessFrame>(
                selectedProcessFrame.subList(0, startIdx));
        trainingFrames.addAll(//from   www  .  ja  v  a  2 s.c o  m
                new ArrayList<ProcessFrame>(selectedProcessFrame.subList(endIdx, selectedProcessFrame.size())));
        trainingFrames.addAll(inverseData);

        String trainingFileName = outDirName + "/" + processName + ".train.combined.cv." + currentFold;
        String testingFileName = outDirName + "/" + processName + ".test.cv." + currentFold;
        String modelName = outDirName + "/" + processName + ".combinedmodel.cv." + currentFold;

        testFilePath.add(testingFileName);
        trainingModelFilePath.add(modelName);

        new ProcessFrameUtil().toParserFormat(trainingFrames, trainingFileName, srlType);
        new ProcessFrameUtil().toParserFormat(testingFrames, testingFileName, srlType);

        doTrain(trainingFileName, modelName);
        startIdx = endIdx;
        if (currentFold == foldSize - 2) {
            endIdx = selectedProcessFrame.size();
        } else {
            endIdx = startIdx + testSize;
        }
    }
}

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From source file:org.apache.solr.response.transform.TestSubQueryTransformer.java

@Test
public void testRowsStartForSubqueryAndScores() throws Exception {

    String johnDeptsIds = h/*from  w  w w .  j  ava  2s.co  m*/
            .query(req(new String[] { "q", "{!join from=dept_ss_dv to=dept_id_s}name_s:john", "wt", "csv",
                    "csv.header", "false", "fl", "id", "rows", "" + deptMultiplier, "sort", "id_i desc" }));

    ArrayList<Object> deptIds = Collections.list(new StringTokenizer(johnDeptsIds));

    final int a = random().nextInt(deptMultiplier + 1);
    final int b = random().nextInt(deptMultiplier + 1);
    final int start = Math.min(a, b);
    final int toIndex = Math.max(a, b);
    List<Object> expectIds = deptIds.subList(start, toIndex);
    ArrayList<String> assertions = new ArrayList<>();
    // count((//result/doc/str[@name='name_s_dv'][.='john']/../result[@name='depts'])[1]/doc/str[@name='id'])
    // random().nextInt(peopleMultiplier);
    assertions.add("count((//result/doc/str[@name='name_s_dv'][.='john']/.."
            + "/result[@name='depts'][@numFound='" + deptMultiplier + "'][@start='" + start + "'])["
            + (random().nextInt(peopleMultiplier) + 1) + "]/doc/str[@name='id'])=" + (toIndex - start));

    // System.out.println(expectIds);

    for (int i = 0; i < expectIds.size(); i++) {
        // (//result/doc/str[@name='name_s_dv'][.='john']/../result[@name='depts'])[1]/doc[1]/str[@name='id']='15'
        String ithDoc = "(//result/doc/str[@name='name_s_dv'][.='john']/.."
                + "/result[@name='depts'][@numFound='" + deptMultiplier + "'][@start='" + start + "'])["
                + (random().nextInt(peopleMultiplier) + 1) + "]/doc[" + (i + 1) + "]";
        assertions.add(ithDoc + "/str[@name='id'][.='" + expectIds.get(i) + "']");
        // let's test scores right there
        assertions.add(ithDoc + "/float[@name='score'][.='" + expectIds.get(i) + ".0']");

    }

    String[] john = new String[] { "q", "name_s:john", "indent", "true", "fl",
            "dept_ss_dv,name_s_dv,depts:[subquery]", "rows", "" + (2 * peopleMultiplier), "depts.q",
            "+{!term f=dept_id_s v=$row.dept_ss_dv}^=0 _val_:id_i", "depts.fl", "id", "depts.fl", "score",
            "depts.indent", "true", "depts.rows", "" + (toIndex - start), "depts.start", "" + start };

    assertQ(req(john), assertions.toArray(new String[] {}));
}

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