Example usage for java.util ArrayList contains

List of usage examples for java.util ArrayList contains

  1. HOME
  2. Java
  3. java
  4. java.util.*
  5. ArrayList
  6. contains

Introduction

In this page you can find the example usage for java.util ArrayList contains.

Prototype

public boolean contains(Object o)

Source Link

Document

Returns true if this list contains the specified element.

Usage

From source file:com.evolveum.midpoint.common.policy.ValuePolicyGenerator.java

/**
 * Count cardinality//w w w  .  j ava  2 s  . c o m
 */
private static HashMap<Integer, ArrayList<String>> cardinalityCounter(
        HashMap<StringLimitType, ArrayList<String>> lims, ArrayList<String> password, Boolean skipMatchedLims,
        boolean uniquenessReached, OperationResult op) {
    HashMap<String, Integer> counter = new HashMap<String, Integer>();

    for (StringLimitType l : lims.keySet()) {
        int counterKey = 1;
        ArrayList<String> chars = lims.get(l);
        int i = 0;
        if (null != password) {
            i = charIntersectionCounter(lims.get(l), password);
        }
        // If max is exceed then error unable to continue
        if (l.getMaxOccurs() != null && i > l.getMaxOccurs()) {
            OperationResult o = new OperationResult("Limitation check :" + l.getDescription());
            o.recordFatalError("Exceeded maximal value for this limitation. " + i + ">" + l.getMaxOccurs());
            op.addSubresult(o);
            return null;
            // if max is all ready reached or skip enabled for minimal skip
            // counting
        } else if (l.getMaxOccurs() != null && i == l.getMaxOccurs()) {
            continue;
            // other cases minimum is not reached
        } else if ((l.getMinOccurs() == null || i >= l.getMinOccurs()) && !skipMatchedLims) {
            continue;
        }
        for (String s : chars) {
            if (null == password || !password.contains(s) || uniquenessReached) {
                //               if (null == counter.get(s)) {
                counter.put(s, counterKey);
                //               } else {
                //                  counter.put(s, counter.get(s) + 1);
                //               }
            }
        }
        counterKey++;

    }

    // If need to remove disabled chars (already reached limitations)
    if (null != password) {
        for (StringLimitType l : lims.keySet()) {
            int i = charIntersectionCounter(lims.get(l), password);
            if (l.getMaxOccurs() != null && i > l.getMaxOccurs()) {
                OperationResult o = new OperationResult("Limitation check :" + l.getDescription());
                o.recordFatalError("Exceeded maximal value for this limitation. " + i + ">" + l.getMaxOccurs());
                op.addSubresult(o);
                return null;
            } else if (l.getMaxOccurs() != null && i == l.getMaxOccurs()) {
                // limitation matched remove all used chars
                LOGGER.trace("Skip " + l.getDescription());
                for (String charToRemove : lims.get(l)) {
                    counter.remove(charToRemove);
                }
            }
        }
    }

    // Transpone to better format
    HashMap<Integer, ArrayList<String>> ret = new HashMap<Integer, ArrayList<String>>();
    for (String s : counter.keySet()) {
        // if not there initialize
        if (null == ret.get(counter.get(s))) {
            ret.put(counter.get(s), new ArrayList<String>());
        }
        ret.get(counter.get(s)).add(s);
    }
    return ret;
}

From source file:it.iit.genomics.cru.simsearch.bundle.utils.AnnotationsFromTrack.java

public Collection<String> getAnnotationsByNumberOfOverlap() {
    ArrayList<Integer> counts = new ArrayList<>();
    counts.addAll(annotationsMappedCount.values());
    Collections.sort(counts);//w  w w . j av a2  s  .co  m
    Collections.reverse(counts);

    ArrayList<String> sortedAnnotations = new ArrayList<>();

    for (Integer count : counts) {
        for (String annotation : getAnnotations()) {
            if (annotationsMappedCount.get(annotation).equals(count)
                    && false == sortedAnnotations.contains(annotation)) {
                sortedAnnotations.add(annotation);
            }
        }
    }

    return sortedAnnotations;
}

From source file:gda.device.scannable.component.UnitsComponent.java

/**
 * Sets the hardware unit to hardwareUnitString. If a user unit has not been explicitly set then the user unit is
 * also set to hardwareUnitString. If the user unit has been explicitly set and the new hardware unit would
 * invalidate this then a DeviceException is thrown.
 * <p>/*  ww w  .  jav  a  2s . co  m*/
 * Based on this string, this method will build a list of acceptable user-units. Afterwards, the acceptable units
 * list can be added to via the addAcceptableUnits method if the defaults do not cover enough.
 * <p>
 *
 * @param hardwareUnitString
 *            The hardwareUnitString to use.
 * @throws DeviceException
 */
public void setHardwareUnitString(String hardwareUnitString) throws DeviceException {
    if (userUnitHasBeenExplicitelySet) {
        // Check the new hardware unit is compatible
        final ArrayList<Unit<? extends Quantity>> compatibleUnits = generateCompatibleUnits(hardwareUnitString);
        if (!compatibleUnits.contains(userUnit)) {
            throw new DeviceException("The hardware unit could not be set to '" + hardwareUnitString
                    + "' because this is incompatible" + " with the explicitely set user unit '"
                    + userUnit.toString() + "'");
        }
    }

    actuallySetHardwareUnitString(hardwareUnitString);
    hardwareUnitHasBeenExplicitelySet = true;
    if (!userUnitHasBeenExplicitelySet) {
        try {
            actuallySetUserUnits(hardwareUnitString);
        } catch (DeviceException e) {
            throw new Error("Error in setHardwareUnitString for " + hardwareUnitString, e);
        }
    }
}

From source file:it.iit.genomics.cru.simsearch.bundle.utils.AnnotationsFromTrack.java

public Collection<String> getAnnotationsByPvalueIncreasing() {
    ArrayList<Double> probabilities = new ArrayList<>();
    probabilities.addAll(pValues.values());
    Collections.sort(probabilities);

    ArrayList<String> sortedAnnotations = new ArrayList<>();

    for (Double probability : probabilities) {
        for (String annotation : getAnnotations()) {
            if (pValues.get(annotation).equals(probability)
                    && false == sortedAnnotations.contains(annotation)) {
                sortedAnnotations.add(annotation);
            }// w  w  w  . j a va 2 s.  com
        }
    }

    return sortedAnnotations;
}

From source file:org.apache.servicemix.wsn.jms.JmsSubscription.java

public void onMessage(String message) {
    //   System.out.println("onMessaged1");
    String text = message;/*w w w  .j  av  a 2 s  .c  o  m*/
    //(super.subscriberAddress != null) && (!super.subscriberAddress.equals("http://localhost:12345/only/register/use"))
    if (true) {
        try {
            //              System.out.println("onMessaged2");
            //               if( httpPost==null )
            //                  httpPost = new HttpPost(super.subscriberAddress);
            //               System.out.println("TextMessage:"+text);
            int start = text.indexOf("TopicExpression/Simple\">") + 24;
            int end = text.indexOf("</wsnt:Topic>");
            String topicName = text.substring(start, end);

            //flag == 
            if (true) {
                //                System.out.println("onMessaged3");
                //?               
                String[] topicPath = topicName.split(":");
                WSNTopicObject current = WsnProcessImpl.topicTree;
                int flag = 0;
                for (int i = 0; i < topicPath.length - 1; i++) {
                    //                     System.out.println("current.getTopicentry().getTopicName():"+current.getTopicentry().getTopicName()+"      topicPath[i]"+topicPath[i]);
                    if (current.getTopicentry().getTopicName().equals(topicPath[i])) {

                        for (int counter = 0; counter < current.getChildrens().size(); counter++) {
                            //                           System.out.println("---:"+current.getChildrens().get(counter).getTopicentry().getTopicName());
                            if (current.getChildrens().get(counter).getTopicentry().getTopicName()
                                    .equals(topicPath[i + 1])) {
                                current = current.getChildrens().get(counter);
                                flag++;
                                break;
                            }
                        }
                    } else {
                        System.out.println("notify faild! there is not this topic in the topic tree!");
                    }
                }
                //????????
                if (flag == topicPath.length - 1) {
                    System.out.println("match success!");
                    ArrayList<String> sendedaddr = new ArrayList<String>();
                    while (current != null) {
                        for (int i = 0; i < current.getSubscribeAddress().size(); i++) {
                            if (sendedaddr.contains(current.getSubscribeAddress().get(i)))
                                continue;
                            sendedaddr.add(current.getSubscribeAddress().get(i));
                            JmsSubscription.diliverToWebservice.doPush(current.getSubscribeAddress().get(i),
                                    text, JmsSubscription.asyClient,
                                    new HttpPost(current.getSubscribeAddress().get(i)), this);
                        }
                        current = current.getParent();
                    }
                } else {
                    System.out.println("notify faild! there is not this topic");
                }
            }

            //             infoTemp.clear();
            ArrayList<String> infoTemp = new ArrayList<String>();
            /**
              * ????
              * ?
              * ???
              */
            if (text.length() > 3000) {
                breakPackage(text, infoTemp);
                //                 Thread.sleep(0);
            } else {
                infoTemp.add(text);
            }
            System.out.println("infoTemp:" + infoTemp.size());
            for (int q = 0; q < infoTemp.size(); q++) {
                //                 System.out.println("JMS-message: " + infoTemp.get(q));
                NotifyObserver notifyObserver = new NotifyObserver();
                notifyObserver.addObserver(RtMgr.getInstance());
                ObserveMutiThread om = new ObserveMutiThread(infoTemp.get(q), notifyObserver);
                om.run();

                if (infoTemp.size() > 1)
                    Thread.sleep(5);
            }

        } catch (Exception e) {
            e.printStackTrace();
            log.warn("Error notifying consumer", e);
        }
    }

}

From source file:gov.nih.nci.rembrandt.web.ajax.DynamicReportGenerator.java

public void generateDynamicReport(String key, Map<String, String> params) {
    String html = new String();

    HttpSession session = ExecutionContext.get().getSession(false);
    PresentationTierCache ptc = ApplicationFactory.getPresentationTierCache();
    BusinessTierCache btc = ApplicationFactory.getBusinessTierCache();
    HttpServletRequest request = ExecutionContext.get().getHttpServletRequest();
    //      HttpServletResponse response = ExecutionContext.get().getHttpServletResponse();

    //lets hold a list of xml generating jobs, so we dont keep kicking off the same job
    ArrayList jobs = session.getAttribute("xmlJobs") != null ? (ArrayList) session.getAttribute("xmlJobs")
            : new ArrayList();

    //only generate XML if its not already cached...leave off for debug
    if (ptc.getNonPersistableObjectFromSessionCache(session.getId(), key) == null && !jobs.contains(key)) {
        Object o = btc.getObjectFromSessionCache(session.getId(), key);
        Finding finding = (Finding) o;/*from   w  ww.  j  a v a  2 s.  c o  m*/
        //generate the XML and cached it
        ReportGeneratorHelper.generateReportXML(finding);
        if (!jobs.contains(key))
            jobs.add(key);
        session.setAttribute("xmlJobs", jobs);
    }
    Object ob = ptc.getNonPersistableObjectFromSessionCache(session.getId(), key);
    if (ob != null && ob instanceof FindingReportBean) {
        try {
            FindingReportBean frb = (FindingReportBean) ob;
            Document reportXML = (Document) frb.getXmlDoc();

            html = ReportGeneratorHelper.renderReport(params, reportXML, "cc_report.xsl");

            jobs.remove(key);
            session.setAttribute("xmlJobs", jobs);
        } catch (Exception e) {
            html = "Error Generating the report.";
            StringWriter stack = new StringWriter();
            e.printStackTrace(new PrintWriter(stack));

            html = stack.toString();
        }
    } else {
        html = "Error generating the report";
    }
    //out the XHTML in the session for reference in presentation...could store in Prescache
    session.setAttribute(key + "_xhtml", html);
    return;
}

From source file:com.jzboy.couchdb.DatabaseDocReadTest.java

@Test
public void testQueryView() throws Exception {
    List<NameValuePair> params = new ArrayList<NameValuePair>() {
        {// ww w. j  ava  2s.  co m
            add(new BasicNameValuePair("include_docs", "true"));
        }
    };
    ArrayList<Document> results = instance.queryView(designDocName, viewName, params);
    ArrayList<String> expDocIds = new ArrayList<String>();
    for (Map.Entry<String, String> entry : docs.entrySet()) {
        if (entry.getValue().contains("\"show\":true")) {
            expDocIds.add(entry.getKey());
        }
    }
    assertEquals("queryView didn't return the expected number of docs", expDocIds.size(), results.size());
    for (Document doc : results) {
        assertTrue("queryView didn't return a document that should have been", expDocIds.contains(doc.getId()));
        assertTrue("Doc returned by queryView has no key", doc.hasKey());
        String str = docs.get(doc.getId());
        JsonNode exp = JsonUtils.createParser(str).readValueAsTree();
        assertEquals("JSON contents of doc returned by queryView didn't match the original", exp,
                doc.getJson());
    }
}

From source file:com.bayontechnologies.bi.pentaho.plugin.openflashchart.OpenFlashChartComponent.java

protected boolean executeAction() {
    //get the input datas
    IPentahoResultSet data = (IPentahoResultSet) getInputValue(CHART_DATA_PROP);
    String chartTemplateString = getInputStringValue(CHART_TEMPLATE_STRING);
    Integer chartWidth = null;//from w w  w  .  j  av a  2s .c  o  m
    IPentahoSession userSession = this.getSession();
    String input1 = getInputStringValue(CHART_WIDTH);
    if (null == input1) {
        chartWidth = new Integer(this.width);
    } else {
        chartWidth = Integer.valueOf(input1);
    }

    Integer chartHeight = null;
    String input2 = getInputStringValue(CHART_HEIGHT);
    if (null == input2) {
        chartHeight = new Integer(this.height);
    } else {
        chartHeight = Integer.valueOf(input2);
    }

    IActionResource fileResource = null;
    String ofcURL = getInputStringValue(OFC_URL);
    if (ofcURL == null || "".equals(ofcURL)) {
        ofcURL = "/pentaho-style/images/open-flash-chart.swf";
    }

    if (chartTemplateString == null || chartTemplateString.equals("")) {
        fileResource = this.getResource(CHART_TEMPLATE);
        try {

            chartTemplateString = PentahoSystem.getSolutionRepository(userSession)
                    .getResourceAsString(fileResource);

        } catch (IOException e) {
            error(e.getLocalizedMessage());
            return false;
        }
    }
    //parse the chart Template String and get the parsed tokens
    map = parseString(chartTemplateString);
    chartTemplateString = replaceChartDefParams(chartTemplateString, data);

    //replace the custom variables
    ArrayList<String> customs = map.get("customs");
    Set inputNames = this.getInputNames();
    for (Iterator iterator = inputNames.iterator(); iterator.hasNext();) {
        String name = (String) iterator.next();
        if (customs.contains(name)) {
            Object value = this.getInputValue(name);
            chartTemplateString = replaceLongStr(chartTemplateString, "{" + name + "}", "" + value);
        }
    }

    log.debug("chartTemplateString after replacing:" + chartTemplateString);

    String solutionName = this.getSolutionName();
    //uuid 
    String uuid = "openFlashChart-" + UUIDUtil.getUUIDAsString();

    IContentRepository repository = ContentRepository.getInstance(userSession);
    IContentLocation cl = null;
    cl = repository.getContentLocationByPath(LOCATION_DIR_PATH);
    if (cl == null)
        cl = repository.newContentLocation(LOCATION_DIR_PATH, solutionName, solutionName, this.getId(), true);
    //Fix me, to create a new contentitem every time is not a good choice.
    //Maybe we can remove the older and create a new one. But I can't find the solution right now. :( 
    IContentItem citem = cl.newContentItem(uuid, uuid, this.getActionTitle(), "txt", "text/plain", "",
            IContentItem.WRITEMODE_OVERWRITE);

    try {
        //get the  outputstream and write the content into the repository.
        OutputStream os = citem.getOutputStream(this.getActionName());
        os.write(chartTemplateString.getBytes(LocaleHelper.getSystemEncoding()));
        os.close();
    } catch (IOException e) {
        error(e.getLocalizedMessage());
        return false;
    }
    //replace the parameters in the flashFragment
    String flashContent = replace(flashFragment, citem.getId(), chartWidth, chartHeight, ofcURL);

    log.debug("html_fragment=" + flashContent);
    Set outputNames = this.getOutputNames();
    if (outputNames.contains("html_fragment")) {
        this.setOutputValue("html_fragment", flashContent);
    }
    if (outputNames.contains("content_url")) {
        this.setOutputValue("content_url", this.getTmpContentURL(citem.getId()));
    }

    return true;
}

From source file:Main.java

@SuppressLint("UseSparseArrays")
public static ArrayList<String> extractor(Notification notification) {
    ArrayList<String> notifText = new ArrayList<String>();
    RemoteViews views = notification.contentView;
    @SuppressWarnings("rawtypes")
    Class secretClass = views.getClass();

    try {/*www.ja  va 2s  .  c om*/

        Field outerFields[] = secretClass.getDeclaredFields();
        for (int i = 0; i < outerFields.length; i++) {

            if (!outerFields[i].getName().equals("mActions"))
                continue;

            outerFields[i].setAccessible(true);

            @SuppressWarnings("unchecked")
            ArrayList<Object> actions = (ArrayList<Object>) outerFields[i].get(views);
            for (Object action : actions) {

                Field innerFields[] = action.getClass().getDeclaredFields();

                Object value = null;
                Integer type = null;
                @SuppressWarnings("unused")
                Integer viewId = null;
                for (Field field : innerFields) {

                    field.setAccessible(true);
                    if (field.getName().equals("value")) {
                        value = field.get(action);
                    } else if (field.getName().equals("type")) {
                        type = field.getInt(action);
                    } else if (field.getName().equals("viewId")) {
                        viewId = field.getInt(action);
                    }
                }

                if (type != null && (type == 9 || type == 10) && value != null) {
                    // System.out.println("Type: " + Integer.toString(type)
                    // + " Value: " + value.toString());
                    if (!notifText.contains(value.toString()))
                        notifText.add(value.toString());
                }

            }
        }

    } catch (Exception e) {
        e.printStackTrace();
    }
    return notifText;
}

From source file:MSUmpire.SeqUtility.FastaParser.java

public void AddFirstMetDroppedPep(String Sequence, int missedcleave, int minlength, int maxlength,
        ArrayList<String> TheoPeptides) {
    if (String.valueOf(Sequence.charAt(0)).equals("M")) {
        int mc = 0;
        for (int i = 1; i < Sequence.length(); i++) {
            if (String.valueOf(Sequence.charAt(i)).equals("K")
                    || String.valueOf(Sequence.charAt(i)).equals("R")) {
                mc++;/*from ww w  . ja v a2  s. co m*/
                if (mc > missedcleave) {
                    return;
                }
                String pep = Sequence.substring(1, i + 1);
                if (pep.length() >= minlength && pep.length() <= maxlength && !TheoPeptides.contains(pep)) {
                    TheoPeptides.add(pep);
                }
            }
        }
    }
}