Example usage for java.lang StringBuilder charAt

List of usage examples for java.lang StringBuilder charAt

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Introduction

In this page you can find the example usage for java.lang StringBuilder charAt.

Prototype

char charAt(int index);

Source Link

Document

Returns the char value at the specified index.

Usage

From source file:com.edgenius.wiki.service.impl.NotificationServiceImpl.java

public List<String> parseReceivers(StringBuilder buf) {
    int len = buf.length();
    List<String> receivers = new ArrayList<String>();
    StringBuilder rece = new StringBuilder();
    int isReceiver = 0;
    int idx;/*  w  ww .java2  s.com*/
    for (idx = 0; idx < len; idx++) {
        char ch = buf.charAt(idx);

        if (ch == '@' && isReceiver != 2) {
            rece.append(ch);
            isReceiver = 1; //expect text or '
            continue;
        }

        if (isReceiver == 0) {
            if (ch != ' ') {
                break;
            } else {
                continue;
            }
        }

        if (ch == '\'' && isReceiver > 0) {
            rece.append(ch);
            if (isReceiver == 1 && idx > 0 && buf.charAt(idx - 1) == '@') {
                isReceiver = 2; //expect end '
            } else if (isReceiver == 2) {
                receivers.add(rece.toString());
                rece = new StringBuilder();
                isReceiver = 0;
            }
            continue;
        }

        if (ch == ' ' && isReceiver == 1) {
            receivers.add(rece.toString());
            rece = new StringBuilder();
            isReceiver = 0;
            continue;
        }
        if (isReceiver > 0) {
            rece.append(ch);
        }
    }
    if (rece.length() != 0) {
        //this already means something wrong - no message in text body, only receivers.  
        //however, just put receiver in list and let outside method to process this case 
        receivers.add(rece.toString());
    }
    buf.delete(0, idx);

    return receivers;
}

From source file:com.github.lindenb.jvarkit.tools.backlocate.BackLocate.java

private void backLocate(PrintStream out, KnownGene gene, String geneName, char aa1, char aa2, int peptidePos1)
        throws IOException {

    final GeneticCode geneticCode = getGeneticCodeByChromosome(gene.getChromosome());
    RNASequence wildRNA = null;/*from   w  w w. j  ava2 s . com*/
    ProteinCharSequence wildProt = null;

    if (genomicSeq == null || !gene.getChromosome().equals(genomicSeq.getChrom())) {
        LOG.info("fetch genome");
        this.genomicSeq = new GenomicSequence(this.indexedFastaSequenceFile, gene.getContig());
    }

    if (gene.isPositiveStrand()) {
        int exon_index = 0;
        while (exon_index < gene.getExonCount()) {
            for (int i = gene.getExonStart(exon_index); i < gene.getExonEnd(exon_index); ++i) {
                if (i < gene.getCdsStart())
                    continue;
                if (i >= gene.getCdsEnd())
                    break;

                if (wildRNA == null) {
                    wildRNA = new RNASequence(genomicSeq, '+');
                }

                wildRNA.genomicPositions.add(i);

                if (wildRNA.length() % 3 == 0 && wildRNA.length() > 0 && wildProt == null) {
                    wildProt = new ProteinCharSequence(geneticCode, wildRNA);
                }
            }
            ++exon_index;
        }

    } else // reverse orientation
    {
        int exon_index = gene.getExonCount() - 1;
        while (exon_index >= 0) {
            for (int i = gene.getExonEnd(exon_index) - 1; i >= gene.getExonStart(exon_index); --i) {
                if (i >= gene.getCdsEnd())
                    continue;
                if (i < gene.getCdsStart())
                    break;

                if (wildRNA == null) {
                    wildRNA = new RNASequence(genomicSeq, '-');
                }

                wildRNA.genomicPositions.add(i);
                if (wildRNA.length() % 3 == 0 && wildRNA.length() > 0 && wildProt == null) {
                    wildProt = new ProteinCharSequence(geneticCode, wildRNA);
                }

            }
            --exon_index;
        }

    } //end of if reverse

    if (wildProt == null) {
        stderr().println("#no protein found for transcript:" + gene.getName());
        return;
    }
    int peptideIndex0 = peptidePos1 - 1;
    if (peptideIndex0 >= wildProt.length()) {
        out.println("#index out of range for :" + gene.getName() + " petide length=" + wildProt.length());
        return;
    }

    if (wildProt.charAt(peptideIndex0) != aa1) {
        out.println("##Warning ref aminod acid for " + gene.getName() + "  [" + peptidePos1
                + "] is not the same (" + wildProt.charAt(peptideIndex0) + "/" + aa1 + ")");
    } else {
        out.println("##" + gene.getName());
    }
    int indexesInRNA[] = new int[] { 0 + peptideIndex0 * 3, 1 + peptideIndex0 * 3, 2 + peptideIndex0 * 3 };
    final String wildCodon = "" + wildRNA.charAt(indexesInRNA[0]) + wildRNA.charAt(indexesInRNA[1])
            + wildRNA.charAt(indexesInRNA[2]);
    /* 2015 : adding possible mut codons */
    final Set<String> possibleAltCodons = new HashSet<>();
    final char bases[] = new char[] { 'A', 'C', 'G', 'T' };
    for (int codon_pos = 0; codon_pos < 3; ++codon_pos) {
        StringBuilder sb = new StringBuilder(wildCodon);
        for (char mutBase : bases) {
            sb.setCharAt(codon_pos, mutBase);
            if (geneticCode.translate(sb.charAt(0), sb.charAt(1), sb.charAt(2)) == Character.toUpperCase(aa2)) {
                possibleAltCodons.add(sb.toString());
            }
        }
    }

    for (int indexInRna : indexesInRNA) {
        out.print(geneName);
        out.print('\t');
        out.print(aa1);
        out.print('\t');
        out.print(peptidePos1);
        out.print('\t');
        out.print(aa2);
        out.print('\t');
        out.print(gene.getName());
        out.print('\t');
        out.print(gene.getStrand() == Strand.NEGATIVE ? "-" : "+");
        out.print('\t');
        out.print(wildProt.charAt(peptideIndex0));
        out.print('\t');
        out.print(indexInRna);
        out.print('\t');
        out.print(wildCodon);
        out.print('\t');
        if (possibleAltCodons.isEmpty()) {
            out.print('.');
        } else {
            boolean first = true;
            for (String mutCodon : possibleAltCodons) {
                if (!first)
                    out.print('|');
                first = false;
                out.print(mutCodon);
            }
        }
        out.print('\t');
        out.print(wildRNA.charAt(indexInRna));
        out.print('\t');
        out.print(gene.getChromosome());
        out.print('\t');
        out.print(wildRNA.genomicPositions.get(indexInRna));
        out.print('\t');
        String exonName = null;
        for (KnownGene.Exon exon : gene.getExons()) {
            int genome = wildRNA.genomicPositions.get(indexInRna);
            if (exon.getStart() <= genome && genome < exon.getEnd()) {
                exonName = exon.getName();
                break;
            }
        }
        out.print(exonName);
        if (this.printSequences) {
            String s = wildRNA.toString();
            out.print('\t');
            out.print(s.substring(0, indexInRna) + "[" + s.charAt(indexInRna) + "]"
                    + (indexInRna + 1 < s.length() ? s.substring(indexInRna + 1) : ""));
            s = wildProt.toString();
            out.print('\t');
            out.print(
                    s.substring(0, peptideIndex0) + "[" + aa1 + "/" + aa2 + "/" + wildProt.charAt(peptideIndex0)
                            + "]" + (peptideIndex0 + 1 < s.length() ? s.substring(peptideIndex0 + 1) : ""));
        }
        out.println();
    }
}

From source file:com.andexert.calendarlistview.library.SimpleMonthView.java

/**
 * /*from w  w  w .  j  a  v  a2s  . c o  m*/
 * @param canvas
 */
private void drawMonthTitle(Canvas canvas) {
    StringBuilder stringBuilder = new StringBuilder(getMonthAndYearString().toLowerCase());
    stringBuilder.setCharAt(0, Character.toUpperCase(stringBuilder.charAt(0)));
    String text = stringBuilder.toString();
    Rect rect = new Rect();
    mMonthTitlePaint.getTextBounds(text, 0, text.length(), rect);
    //        int x = (mWidth + 2 * mPadding) / 2;
    int leftPadding = getResources().getDimensionPixelSize(R.dimen.month_day_left_padding);
    int x = rect.width() / 2 + leftPadding;
    //        int y = (MONTH_HEADER_SIZE - MONTH_DAY_LABEL_TEXT_SIZE) / 2 + (MONTH_LABEL_TEXT_SIZE / 3);
    int y = (MONTH_HEADER_SIZE - MONTH_DAY_LABEL_TEXT_SIZE) + (MONTH_LABEL_TEXT_SIZE / 4);
    if (mIsShowMonthDay) {
        y = MONTH_HEADER_SIZE - MONTH_DAY_LABEL_TEXT_SIZE - (MONTH_LABEL_TEXT_SIZE * 2);
    }
    canvas.drawText(text, x, y, mMonthTitlePaint);
    int linePadding = getResources().getDimensionPixelSize(R.dimen.month_day_line_padding);
    canvas.drawLine(leftPadding, y + linePadding, rect.width() + leftPadding, y + linePadding,
            mMonthNumLinePaint);
}

From source file:com.esri.geoevent.datastore.GeoEventDataStoreProxy.java

private URI createDestinationURI(ServerInfo serverInfo, String path, MessageContext msgContext) {
    try {/*from  w  w  w  .  jav  a 2  s  . c o  m*/
        if (serverInfo.tokenExpiration == null) {
            getTokenForServer(serverInfo, msgContext);
        }
        StringBuilder sb = new StringBuilder();
        sb.append(serverInfo.url.toExternalForm());
        if (sb.charAt(sb.length() - 1) != '/') {
            sb.append('/');
        }
        sb.append(path);

        String queryString = msgContext.getHttpServletRequest().getQueryString();
        String tokenToUse = null;
        if (serverInfo.encryptedToken != null) {
            tokenToUse = Crypto.doDecrypt(serverInfo.encryptedToken);
        }
        if (!StringUtils.isEmpty(queryString)) {
            sb.append('?');

            if (serverInfo.tokenExpiration == null || System.currentTimeMillis() > serverInfo.tokenExpiration) {
                getTokenForServer(serverInfo, msgContext);
            }
            List<NameValuePair> params = parseQueryStringAndAddToken(queryString, tokenToUse);
            sb.append(URLEncodedUtils.format(params, "UTF-8"));
        } else if (tokenToUse != null) {
            sb.append("?token=");
            sb.append(tokenToUse);
        }

        return new URI(sb.toString());
    } catch (Throwable t) {
        throw new RuntimeException(t);
    }
}

From source file:com.cloudant.sync.datastore.DatastoreImplForceInsertTest.java

@Test
public void forceInsert_sameLengthOfPath_remoteRevisionWins() throws Exception {
    {//from  w  w w.j  a  v  a 2 s  . c  om
        DocumentRevision rev = createDbObject();
        datastore.forceInsert(rev, "1-rev", "2-rev", "3-rev", "4-rev");

        DocumentRevision insertedObj = datastore.getDocument(OBJECT_ID);
        insertedObj.setBody(bodyTwo);
        DocumentRevision updateObj = datastore.updateDocumentFromRevision(insertedObj);
        insertedObj.setBody(bodyTwo);
        DocumentRevision updateObj2 = datastore.updateDocumentFromRevision(updateObj);

        Assert.assertNotNull(updateObj2);

        assertDBObjectIsCorrect(OBJECT_ID, 6, bodyTwo);
    }

    String localRevisionId6 = null;
    String remoteRevisionId6 = null;
    {
        DocumentRevisionTree tree = datastore.getAllRevisionsOfDocument(OBJECT_ID);
        DocumentRevision current = tree.getCurrentRevision();
        List<DocumentRevision> all = tree.getPathForNode(current.getSequence());
        // Make sure the latest revision from remote db has bigger String (in terms of String comparison)
        for (DocumentRevision a : all) {
            int g = CouchUtils.generationFromRevId(a.getRevision());
            if (g == 6) {
                localRevisionId6 = a.getRevision();
                StringBuilder sb = new StringBuilder(localRevisionId6);
                sb.setCharAt(2, (char) (sb.charAt(2) + 1));
                remoteRevisionId6 = sb.toString();
            }
        }

        Assert.assertNotNull(localRevisionId6);
        Assert.assertNotNull(remoteRevisionId6);

        DocumentRevisionBuilder builder = new DocumentRevisionBuilder();
        builder.setDocId(OBJECT_ID);
        builder.setRevId(remoteRevisionId6);
        builder.setDeleted(false);
        builder.setBody(bodyOne);
        DocumentRevision newRev = builder.build();

        datastore.forceInsert(newRev, "1-rev", "2-rev", "3-rev", "4-rev", "5-rev", remoteRevisionId6);
    }

    DocumentRevision obj = datastore.getDocument(OBJECT_ID);
    Assert.assertEquals(remoteRevisionId6, obj.getRevision());
    Assert.assertTrue(Arrays.equals(bodyOne.asBytes(), obj.getBody().asBytes()));
}

From source file:com.cloudant.sync.datastore.DatastoreImplForceInsertTest.java

@Test
public void forceInsert_sameLengthOfPath_localRevisionWins() throws Exception {
    {/*  w w  w .ja  va  2  s  .c  o m*/
        DocumentRevision rev = createDbObject();
        datastore.forceInsert(rev, "1-rev", "2-rev", "3-rev", "4-rev");

        DocumentRevision insertedObj = datastore.getDocument(OBJECT_ID);
        insertedObj.setBody(bodyTwo);
        DocumentRevision updateObj = datastore.updateDocumentFromRevision(insertedObj);
        insertedObj.setBody(bodyTwo);
        DocumentRevision updateObj2 = datastore.updateDocumentFromRevision(updateObj);

        Assert.assertNotNull(updateObj2);

        assertDBObjectIsCorrect(OBJECT_ID, 6, bodyTwo);
    }

    String localRevisionId6 = null;
    String remoteRevisionId6 = null;
    {
        // Make sure the latest revision from remote db has smaller String (in terms of String comparison)
        DocumentRevisionTree tree = datastore.getAllRevisionsOfDocument(OBJECT_ID);
        DocumentRevision current = tree.getCurrentRevision();
        List<DocumentRevision> all = tree.getPathForNode(current.getSequence());
        for (DocumentRevision a : all) {
            int g = CouchUtils.generationFromRevId(a.getRevision());
            if (g == 6) {
                localRevisionId6 = a.getRevision();
                StringBuilder sb = new StringBuilder(localRevisionId6);
                sb.setCharAt(2, (char) (sb.charAt(2) - 1));
                remoteRevisionId6 = sb.toString();
            }
        }

        Assert.assertNotNull(localRevisionId6);
        Assert.assertNotNull(remoteRevisionId6);

        DocumentRevisionBuilder builder = new DocumentRevisionBuilder();
        builder.setDocId(OBJECT_ID);
        builder.setRevId(remoteRevisionId6);
        builder.setDeleted(false);
        builder.setBody(bodyOne);
        DocumentRevision newRev = builder.build();

        datastore.forceInsert(newRev, "1-rev", "2-rev", "3-rev", "4-rev", "5-rev", remoteRevisionId6);
    }

    DocumentRevision obj = datastore.getDocument(OBJECT_ID);
    Assert.assertEquals(localRevisionId6, obj.getRevision());
    Assert.assertTrue(Arrays.equals(bodyTwo.asBytes(), obj.getBody().asBytes()));
}

From source file:org.deventropy.shared.utils.DirectoryArchiverUtilTest.java

private ArchiveEntries createArchiveEntries(final File sourceDirectory, final String pathPrefix)
        throws IOException {
    final ArchiveEntries archiveEntries = new ArchiveEntries();
    final Path sourcePath = Paths.get(sourceDirectory.toURI());
    final StringBuilder normalizedPathPrefix = new StringBuilder();
    if (null != pathPrefix && !pathPrefix.isEmpty()) {
        normalizedPathPrefix.append(pathPrefix.replace("\\", "/"));
        if (normalizedPathPrefix.charAt(normalizedPathPrefix.length() - 1) != '/') {
            normalizedPathPrefix.append('/');
        }//  w  w w  . j  av  a  2 s . co m
    }

    Files.walkFileTree(sourcePath, new SimpleFileVisitor<Path>() {

        @Override
        public FileVisitResult preVisitDirectory(final Path dir, final BasicFileAttributes attrs)
                throws IOException {
            final Path relativeSourcePath = sourcePath.relativize(dir);
            String normalizedPath = normalizedPathPrefix.toString() + relativeSourcePath;
            if (!normalizedPath.isEmpty()) {
                if (!normalizedPath.endsWith("/")) {
                    normalizedPath += "/";
                }
                archiveEntries.dirs.add(normalizedPath.replace("\\", "/"));
            }
            return FileVisitResult.CONTINUE;
        }

        @Override
        public FileVisitResult visitFile(final Path file, final BasicFileAttributes attrs) throws IOException {
            final Path relativeSourcePath = sourcePath.relativize(file);
            final String normalizedPath = normalizedPathPrefix.toString() + relativeSourcePath;
            final byte[] md5Digest = getMd5Digest(Files.newInputStream(file), true);
            archiveEntries.files.put(normalizedPath.replace("\\", "/"), md5Digest);
            return FileVisitResult.CONTINUE;
        }
    });
    return archiveEntries;
}

From source file:mml.handler.get.MMLGetMMLHandler.java

/**
 * Count the numebr of newlines at the end of the MML text being built
 * @param sb the mml text// w w  w . j  a v  a2s . c om
 * @return the number of terminal NLs
 */
int countTerminalNLs(StringBuilder sb) {
    int nNLs = 0;
    for (int i = sb.length() - 1; i > 0; i--) {
        if (sb.charAt(i) == '\n')
            nNLs++;
        else
            break;
    }
    return nNLs;
}

From source file:gool.generator.common.CommonCodeGenerator.java

/**
 * <pre>//from   www.  j av  a 2s .com
 * Produce indented code in a manner similar to printf but with custom conversions.
 * %%  a single "%"
 * %s  Print an argument as a string, without indentation or newlines added.
 *     Similar to the corresponding flag of <i>String.format</i>.
 * %<i>n</i>  (where <i>n</i> is a digit)
 *     Print an argument as a bloc indented <i>n</i> times from the current indentation level.
 *     Newlines are inserted before and after the bloc.
 * %-<i>n</i> (where <i>n</i> is a digit)
 *     <i>n</i> times the indentation string, does not consumes a argument.
 *     %-0 becomes a empty string (it does nothing but is still parsed)
 * 
 * @param format
 *            the format string
 * @param arguments
 *            the objects to format, each one corresponding to a % code
 * @return the formated string
 */
protected String formatIndented(String format, Object... arguments) {
    StringBuilder sb = new StringBuilder(format);
    int pos = sb.indexOf("%");
    int arg = 0;
    while (pos != -1) {
        if (sb.charAt(pos + 1) == '%') {
            sb = sb.replace(pos, pos + 2, "%");
        } else if (sb.charAt(pos + 1) == 's') {
            sb = sb.replace(pos, pos + 2, arguments[arg].toString());
            pos += arguments[arg].toString().length() - 1;
            arg++;
        } else if (Character.isDigit(sb.charAt(pos + 1))) {
            String replacement = ("\n" + arguments[arg].toString().replaceFirst("\\s*\\z", "")).replace("\n",
                    "\n" + StringUtils.repeat(indentation, Character.digit(sb.charAt(pos + 1), 10))) + "\n";
            sb = sb.replace(pos, pos + 2, replacement);
            pos += replacement.length() - 1;
            arg++;
        } else if (sb.charAt(pos + 1) == '-' && Character.isDigit(sb.charAt(pos + 2))) {
            String replacement = StringUtils.repeat(indentation, Character.digit(sb.charAt(pos + 2), 10));
            sb = sb.replace(pos, pos + 3, replacement);
            pos += replacement.length();
        }
        pos = sb.indexOf("%", pos);
    }
    return sb.toString();
}

From source file:edu.chalmers.dat076.moviefinder.service.TitleParser.java

private TemporaryMedia getInformation(StringBuilder mySb) {

    TemporaryMedia returnMedia = new TemporaryMedia();
    StringBuilder wordSb = new StringBuilder();

    int tmpYear;/*from  w w  w.  j  a va  2 s.  c  o m*/
    int year = -1;
    int thisYear = Calendar.getInstance().get(Calendar.YEAR);

    boolean deleteYear = false;
    boolean finalWord = true;

    for (int i = 0; i < mySb.length(); i++) {
        if (mySb.charAt(i) == '.' || mySb.charAt(i) == ' ' || mySb.charAt(i) == '-' || mySb.charAt(i) == '_') {

            if (Constants.MOVIE_FILE_ENDING_WORDS.contains(wordSb.toString())) {
                mySb.delete(i - (wordSb.length() + 1), mySb.length());
                finalWord = false;
                // final useful word found. No point in continuing.
                break;
            }
            mySb.replace(i, i + 1, " ");

            tmpYear = checkForYear(wordSb);
            if (tmpYear > 1900 && tmpYear <= thisYear) {
                year = tmpYear;
                deleteYear = true;
            }
            wordSb.setLength(0);

        } else if (wordSb.length() == 0
                && (mySb.charAt(i) == 'S' || mySb.charAt(i) == 's' || Character.isDigit(mySb.charAt(i)))) {
            // See if new word contains series and episode information.

            StringBuilder whatsLeft = new StringBuilder(mySb.subSequence(i, mySb.length()));
            if (getEpisodePotential(whatsLeft)) {
                TemporaryMedia tmpMedia = getEpisodeInfo(whatsLeft);
                returnMedia.setIsMovie(false);
                returnMedia.setSeason(tmpMedia.getSeason());
                returnMedia.setEpisode(tmpMedia.getEpisode());
                mySb.delete(i, mySb.length());
                // series and episode information saved. No point in continuing.
                break;

            } else {
                wordSb.append(mySb.charAt(i));
            }
        } else if (mySb.charAt(i) == '[' || mySb.charAt(i) == '(') {
            // Brackets shoudl usually be removed. They could possibly contain realease year.

            if (Constants.MOVIE_FILE_ENDING_WORDS.contains(wordSb.toString())) {
                mySb.delete(i - (wordSb.length() + 1), mySb.length());
                finalWord = false;
                // final useful word found. No point in continuing.
                break;
            }
            tmpYear = checkForYear(wordSb);
            if (tmpYear > 1900 && tmpYear <= thisYear) {
                year = tmpYear;
                deleteYear = true;
            }
            wordSb.setLength(0);

            if (mySb.charAt(i) == '[') {
                tmpYear = removeUntil(mySb, i, ']');
            } else if (mySb.charAt(i) == '(') {
                tmpYear = removeUntil(mySb, i, ')');
            }
            if (tmpYear > 1900 && tmpYear <= thisYear) {
                year = tmpYear;
                deleteYear = false;
            }
            i--; // Need to compensate for removing bracket.

        } else {
            // Nothing useful here. Save the char and continue.
            wordSb.append(mySb.charAt(i));
        }
    }

    if (finalWord && Constants.MOVIE_FILE_ENDING_WORDS.contains(wordSb.toString())) {
        mySb.delete(mySb.length() - wordSb.length(), mySb.length());
    } else {
        tmpYear = checkForYear(wordSb);
        if (tmpYear > 1900 && tmpYear <= thisYear) {
            year = tmpYear;
            deleteYear = true;
        }
    }
    if (deleteYear && returnMedia.IsMovie()) {
        int i = mySb.lastIndexOf(year + "");
        mySb.delete(i, i + 4);
    }

    returnMedia.setYear(year);
    returnMedia.setName(mySb.toString().trim());

    return returnMedia;
}