Example usage for java.lang RuntimeException RuntimeException

Introduction

In this page you can find the example usage for java.lang RuntimeException RuntimeException.

Prototype

public RuntimeException() 

Source Link

Document

Constructs a new runtime exception with null as its detail message.

Usage

From source file:GetColor.java

static public void main(String[] args) {
    Rabbit rabbit = new Rabbit();
    //start extract snippet3
    setObjectColor(rabbit, Color.WHITE);
    //stop extract snippet3
    if (!rabbit.setColorCalled)
        throw new RuntimeException();
}

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From source file:CatchAllThreadExceptionHandler.java

public static void main(String[] args) {
    CatchAllThreadExceptionHandler handler = new CatchAllThreadExceptionHandler();

    // Set an uncaught exception handler for main thread
    Thread.currentThread().setUncaughtExceptionHandler(handler);

    // Throw an exception
    throw new RuntimeException();
}

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From source file:com.novadart.silencedetect.SilenceDetect.java

public static void main(String[] args) {

    // create the parser
    CommandLineParser parser = new BasicParser();
    try {/*from  w  w w. j av a  2  s  . co m*/
        // parse the command line arguments
        CommandLine line = parser.parse(OPTIONS, args);

        if (line.hasOption("h")) {

            printHelp();

        } else {

            String decibels = "-10";
            if (line.hasOption("b")) {
                decibels = "-" + line.getOptionValue("b");
            } else {
                throw new RuntimeException();
            }

            String videoFile = null;

            if (line.hasOption("i")) {

                videoFile = line.getOptionValue("i");

                Boolean debug = line.hasOption("d");

                if (line.hasOption("t")) {

                    System.out.println(printAudioTracksList(videoFile, debug));

                } else if (line.hasOption("s")) {

                    int trackNumber = Integer.parseInt(line.getOptionValue("s"));
                    System.out.println(printAudioTrackSilenceDuration(videoFile, trackNumber, decibels, debug));

                } else {

                    printHelp();

                }

            } else if (line.hasOption("-j")) {

                // choose file
                final JFileChooser fc = new JFileChooser();
                fc.setVisible(true);
                int returnVal = fc.showOpenDialog(null);
                if (returnVal == JFileChooser.APPROVE_OPTION) {

                    videoFile = fc.getSelectedFile().getAbsolutePath();

                } else {
                    return;
                }

                JTextArea tracks = new JTextArea();
                tracks.setText(printAudioTracksList(videoFile, true));
                JSpinner trackNumber = new JSpinner();
                trackNumber.setValue(1);
                final JComponent[] inputs = new JComponent[] { new JLabel("Audio Tracks"), tracks,
                        new JLabel("Track to analyze"), trackNumber };
                JOptionPane.showMessageDialog(null, inputs, "Select Audio Track", JOptionPane.PLAIN_MESSAGE);

                JTextArea results = new JTextArea();
                results.setText(printAudioTrackSilenceDuration(videoFile, (int) trackNumber.getValue(),
                        decibels, false));
                final JComponent[] resultsInputs = new JComponent[] { new JLabel("Results"), results };
                JOptionPane.showMessageDialog(null, resultsInputs, "RESULTS!", JOptionPane.PLAIN_MESSAGE);

            } else {
                printHelp();
                return;
            }

        }

    } catch (ParseException | IOException | InterruptedException exp) {
        // oops, something went wrong
        System.out.println("There was a problem :(\nReason: " + exp.getMessage());
    }
}

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From source file:cc.redberry.core.performance.ProductBijectionPerformanceTest.java

public static void main(String[] args) {
    int badCounter = 0;
    //        CC.resetTensorNames(-3912578993076521674L);
    RandomTensor rp = new RandomTensor(4, 10, new int[] { 4, 0, 0, 0 }, new int[] { 10, 0, 0, 0 }, false);
    rp.reset(-3806751651286565680L);/*from w w  w. j av a  2 s.  co  m*/
    System.out.println("Random Seed = " + rp.getSeed());
    System.out.println("NM Seed = " + CC.getNameManager().getSeed());
    DescriptiveStatistics timeStats = new DescriptiveStatistics();
    DescriptiveStatistics trysStats = new DescriptiveStatistics();
    int count = 0;
    while (++count < 500) {
        //            CC.resetTensorNames();
        Tensor t = rp.nextProduct(15);
        if (!(t instanceof Product))
            continue;

        Product from = (Product) t;

        long start = System.nanoTime();
        ProductsBijectionsPort port = new ProductsBijectionsPort(from.getContent(), from.getContent());

        int[] bijection;
        boolean good = false;
        int trys = 0;
        OUTER: while (trys++ < 5000 && (bijection = port.take()) != null) {
            for (int i = 0; i < bijection.length; ++i)
                if (bijection[i] != i)
                    continue OUTER;
            good = true;
            break;
        }

        double millis = 1E-6 * (System.nanoTime() - start);
        timeStats.addValue(millis);
        trysStats.addValue(trys);

        if (!good)
            throw new RuntimeException();
    }
    System.out.println(timeStats);
    System.out.println(trysStats);
}

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From source file:gedi.lfc.quick.ShiroguchiCounter.java

public static void main(String[] args) throws IOException {

    String path = "/home/users/erhard/biostor/seq/ngade/shiroguchi_randombarcodes/data/";

    MemoryIntervalTreeStorage<int[]> reads = new MemoryIntervalTreeStorage<int[]>(int[].class);

    String[] files = { "Shiroguchi_A_collapsed.bed", "Shiroguchi_B_collapsed.bed",
            "Shiroguchi_A_uncollapsed.bed", "Shiroguchi_B_uncollapsed.bed" };
    for (int i = 0; i < 4; i++) {
        Iterator<String> it = new LineOrientedFile(path + files[i]).lineIterator();
        while (it.hasNext()) {
            String[] f = StringUtils.split(it.next(), '\t');
            Chromosome chr = Chromosome.obtain(f[0]);
            ArrayGenomicRegion region = new ArrayGenomicRegion(Integer.parseInt(f[1]), Integer.parseInt(f[2]));
            int c = Integer.parseInt(StringUtils.splitField(f[3], '|', 0));

            int[] counts = reads.getData(chr, region);
            if (counts == null)
                reads.add(chr, region, counts = new int[4]);

            counts[i] += c;/*from ww  w.  ja va  2  s . c o  m*/
        }
    }

    HashMap<String, String> map = new HashMap<String, String>();
    new LineOrientedFile(path + "U00096.2.genes.csv").lineIterator().forEachRemaining(s -> {
        String[] f = StringUtils.split(s, '\t');
        map.put(f[0], f[7]);
    });

    LineOrientedFile fragments = new LineOrientedFile("fragments.csv");
    fragments.startWriting();
    fragments.writef("Gene\tonlyA\tonlyB\tBoth\tLength\n");

    LineOrientedFile bias = new LineOrientedFile("bias.csv");
    bias.startWriting();
    bias.writef("OriginalA\tBiasA\tOriginalB\tBiasB\n");

    IntArrayList biasFactors = new IntArrayList();
    ArrayList<GeneData> geneData = new ArrayList<GeneData>();

    MemoryIntervalTreeStorage<Transcript> genes = new BiomartExonFileReader(path + "U00096.2.exons.csv", false)
            .readIntoMemoryTakeFirst();
    for (ImmutableReferenceGenomicRegion<Transcript> g : genes.getReferenceGenomicRegions()) {
        ArrayList<ImmutableReferenceGenomicRegion<int[]>> frag = reads
                .getReferenceRegionsIntersecting(g.getReference().toStrandIndependent(), g.getRegion());

        GeneData gd = new GeneData();

        int l = g.getRegion().getTotalLength();
        for (ImmutableReferenceGenomicRegion<int[]> r : frag) {
            if (r.getData()[0] == 0)
                gd.onlyB++;
            if (r.getData()[1] == 0)
                gd.onlyA++;
            if (r.getData()[0] == 0 && r.getData()[1] == 0)
                throw new RuntimeException();

            bias.writef("%d\t%.0f\t%d\t%.0f\n", r.getData()[0], r.getData()[2] / (double) r.getData()[0],
                    r.getData()[1], r.getData()[3] / (double) r.getData()[1]);
            if (r.getData()[0] > 0) {
                biasFactors.add(r.getData()[2] / r.getData()[0]);
            }
            if (r.getData()[1] > 0) {
                biasFactors.add(r.getData()[3] / r.getData()[1]);
            }

        }
        gd.both = frag.size() - gd.onlyA - gd.onlyB;
        fragments.writef("%s\t%d\t%d\t%d\t%d\n", map.get(g.getData().getTranscriptId()), gd.onlyA, gd.onlyB,
                gd.both, l);

        if (gd.onlyA + gd.onlyB + gd.both > 0)
            geneData.add(gd);
    }

    fragments.finishWriting();
    bias.finishWriting();

    double fc = 1.4;
    int rep = 5;
    int nDiff = 1000;
    int n = 10000;
    int N = 6000;
    double noise = 0.05;

    LineOrientedFile countMatrix = new LineOrientedFile("countMatrix.csv");
    countMatrix.startWriting();

    LineOrientedFile downCountMatrix = new LineOrientedFile("countMatrix_downsampled.csv");
    downCountMatrix.startWriting();

    RandomNumbers rnd = new RandomNumbers();
    for (int i = 0; i < n; i++) {
        GeneData gd = geneData.get(rnd.getUnif(0, geneData.size()));

        //         int N = gd.both==0?Integer.MAX_VALUE/2:(int) (gd.onlyA+gd.onlyB+gd.both+gd.onlyA*gd.onlyB/gd.both);
        double p1 = (gd.onlyA + gd.both) / (double) N;
        double p2 = i < nDiff ? p1 / fc : p1;

        ArrayList<ReadData> list = new ArrayList<ReadData>();
        for (int r = 0; r < rep * 2; r++) {
            int k = rnd.getBinom(N, r < rep ? p1 : p2) + 1;
            int hit = N == -1 ? 0 : rnd.getBinom(k, list.size() / (double) N);
            rnd.shuffle(list);
            for (int x = 0; x < hit; x++)
                list.get(x).reads[r] = (int) rnd.getNormal(list.get(x).bias, list.get(x).bias * noise);
            for (int x = 0; x < k - hit; x++)
                list.add(new ReadData(biasFactors.getInt(rnd.getUnif(0, biasFactors.size())), rep * 2, r));
        }

        int[] c = new int[rep * 2];
        for (ReadData d : list) {
            for (int r = 0; r < c.length; r++) {
                c[r] += d.reads[r];
            }
        }

        double[] down = new double[rep * 2];
        for (ReadData d : list) {
            double max = ArrayUtils.max(d.reads);
            for (int r = 0; r < down.length; r++) {
                down[r] += d.reads[r] / max;
            }
        }

        countMatrix.writeLine(StringUtils.concat("\t", c));
        downCountMatrix.writeLine(StringUtils.concat("\t", down));

    }

    countMatrix.finishWriting();
    downCountMatrix.finishWriting();

}

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From source file:com.otz.plugin.transport.funnel.FunnelService.java

public static void main(String[] args) {
    List<String> test = new ArrayList<>();
    test.add("1");
    test.add("2");
    test.add("3");

    String result = Observable.from(test).filter(s -> s.equals("4")).first()
            .onErrorResumeNext(Observable.error(new RuntimeException())).flatMap(s -> {
                System.out.println(s);
                return Observable.just(s);
            }).toBlocking().single();//from  w  w  w .  j a  v a  2 s . c  o  m

    System.out.println(result);
}

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From source file:Main.java

public static void sleep(long millis) {
    try {/*w w w .  j a v  a2  s  . c o m*/
        Thread.sleep(millis);
    } catch (InterruptedException e) {
        throw new RuntimeException();
    }
}

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From source file:Main.java

/**
 * Wrapper over newSingleThreadExecutor.
 * @param threadName (undocumented)/*  ww  w  . j  av  a 2s .c o m*/
 * @return (undocumented)
 */
static public java.util.concurrent.ExecutorService newDaemonSingleThreadExecutor(java.lang.String threadName) {
    throw new RuntimeException();
}

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From source file:Main.java

/**
 * Create a thread factory that names threads with a prefix and also sets the threads to daemon.
 * @param prefix (undocumented)/*from   w ww.  j a  va 2s.c o m*/
 * @return (undocumented)
 */
static public java.util.concurrent.ThreadFactory namedThreadFactory(java.lang.String prefix) {
    throw new RuntimeException();
}

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From source file:Main.java

/**
 * Wrapper over ScheduledThreadPoolExecutor.
 * @param threadName (undocumented)/*  w w w. jav  a 2 s .c om*/
 * @return (undocumented)
 */
static public java.util.concurrent.ScheduledExecutorService newDaemonSingleThreadScheduledExecutor(
        java.lang.String threadName) {
    throw new RuntimeException();
}

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