Example usage for java.lang Exception getStackTrace

List of usage examples for java.lang Exception getStackTrace

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Introduction

In this page you can find the example usage for java.lang Exception getStackTrace.

Prototype

public StackTraceElement[] getStackTrace()

Source Link

Document

Provides programmatic access to the stack trace information printed by #printStackTrace() .

Usage

From source file:org.apache.gora.cassandra.store.CassandraStore.java

/** 
 * Initialize is called when then the call to 
 * {@link org.apache.gora.store.DataStoreFactory#createDataStore(Class<D> dataStoreClass, Class<K> keyClass, Class<T> persistent, org.apache.hadoop.conf.Configuration conf)}
 * is made. In this case, we merely delegate the store initialization to the 
 * {@link org.apache.gora.cassandra.store.CassandraClient#initialize(Class<K> keyClass, Class<T> persistentClass)}. 
 *//* www .  j ava 2  s  .  co m*/
public void initialize(Class<K> keyClass, Class<T> persistent, Properties properties) {
    try {
        super.initialize(keyClass, persistent, properties);
        this.cassandraClient.initialize(keyClass, persistent);
    } catch (Exception e) {
        LOG.error(e.getMessage());
        LOG.error(e.getStackTrace().toString());
    }
}

From source file:com.thoughtworks.go.service.ConfigRepository.java

void cleanAndResetToMaster() throws IOException {
    try {/*from w  w  w.ja  v  a  2s  .  c o  m*/
        git.reset().setMode(ResetCommand.ResetType.HARD).call();
        checkout("master");
        deleteBranch(BRANCH_AT_REVISION);
        deleteBranch(BRANCH_AT_HEAD);
    } catch (Exception e) {
        String currentBranch = git.getRepository().getBranch();
        LOGGER.error(
                "Error while trying to clean up config repository, CurrentBranch: {} \n : \n Message: {} \n StackTrace: {}",
                currentBranch, e.getMessage(), e.getStackTrace(), e);
        throw new RuntimeException(e);
    }
}

From source file:org.openmrs.web.controller.report.ReportSchemaXmlFormController.java

/**
 * @see org.springframework.web.servlet.mvc.SimpleFormController#onSubmit(javax.servlet.http.HttpServletRequest,
 *      javax.servlet.http.HttpServletResponse, java.lang.Object,
 *      org.springframework.validation.BindException)
 *//*from  ww w . j  a  va  2s .c  o m*/
@Override
protected ModelAndView onSubmit(HttpServletRequest request, HttpServletResponse response, Object commandObject,
        BindException errors) throws Exception {
    ReportSchemaXml reportSchemaXml = (ReportSchemaXml) commandObject;
    ReportService reportService = (ReportService) Context.getService(ReportService.class);

    try {
        // create a new object out of their xml in order to verify xml and copy out the id/name/desc
        ReportSchema schema = reportService.getReportSchema(reportSchemaXml);

        // if the user changed the reportSchemaId to create a new one, create a new object here 
        // so hibernate doesn't complain
        if (reportSchemaXml.getReportSchemaId() != null
                && !schema.getReportSchemaId().equals(reportSchemaXml.getReportSchemaId())) {
            String xml = reportSchemaXml.getXml();
            reportSchemaXml = new ReportSchemaXml();
            reportSchemaXml.setXml(xml);
        }

        reportSchemaXml.populateFromReportSchema(schema);

        // save the xml to the database
        reportService.saveReportSchemaXml(reportSchemaXml);

    } catch (Exception ex) {
        log.warn("Exception building ReportSchema from XML", ex);
        if (ex.getCause() != null) {
            Throwable temp = ex.getCause();
            while (temp.getCause() != null)
                temp = temp.getCause();
            errors.rejectValue("xml", temp.getMessage());
        } else {
            StringBuilder sb = new StringBuilder();
            sb.append("Invalid XML content<br/>");
            sb.append(ex).append("<br/>");
            for (StackTraceElement e : ex.getStackTrace())
                sb.append(e.toString()).append("<br/>");
            errors.rejectValue("xml", sb.toString());
        }
        return showForm(request, response, errors);
    }

    HttpSession httpSession = request.getSession();
    httpSession.setAttribute(WebConstants.OPENMRS_MSG_ATTR, "reportingcompatibility.Report.manageSchema.saved");
    return new ModelAndView(new RedirectView(getSuccessView()));
}

From source file:org.openmrs.web.controller.report.ReportSchemaXmlFormController.java

/**
 * @see org.springframework.validation.Validator#validate(java.lang.Object,
 *      org.springframework.validation.Errors)
 *///www  .  j  av  a  2s . com
public void validate(Object commandObject, Errors errors) {
    ValidationUtils.rejectIfEmpty(errors, "xml", "Paste XML for report before saving");
    ReportSchemaXml rsx = (ReportSchemaXml) commandObject;
    try {
        ReportService reportService = (ReportService) Context.getService(ReportService.class);
        ReportSchema schema = reportService.getReportSchema(rsx);
        if (schema == null)
            throw new NullPointerException();
    } catch (Exception ex) {
        log.warn("Exception building ReportSchema from XML", ex);
        if (ex.getCause() != null) {
            Throwable temp = ex.getCause();
            while (temp.getCause() != null) {
                temp = temp.getCause();
            }
            errors.rejectValue("xml", temp.getMessage());
        } else {
            StringBuilder sb = new StringBuilder();
            sb.append("Invalid XML content<br/>");
            sb.append(ex).append("<br/>");
            for (StackTraceElement e : ex.getStackTrace())
                sb.append(e.toString()).append("<br/>");
            errors.rejectValue("xml", sb.toString());
        }
    }
}

From source file:de.uzk.hki.da.at.AcceptanceTestHelper.java

/**
 * /*from ww w .  j  a  v  a  2s .com*/
 * @param originalName
 * @return null if no object found.
 */
Object getObject(String originalName) {
    Object object = null;
    try {
        object = new ObjectNamedQueryDAO().getUniqueObject(originalName, testContractor.getShort_name());
    } catch (Exception e) {
        System.out.println("Catched exception " + e.getMessage() + ". Try again.");
        try {
            Thread.sleep(1000);
        } catch (InterruptedException e1) {
            e1.printStackTrace();
        }
        try {
            object = new ObjectNamedQueryDAO().getUniqueObject(originalName, testContractor.getShort_name());
        } catch (Exception e2) {
            fail("Exception loading Object called " + originalName + " " + e2.getStackTrace());
        }
    }
    return object;
}

From source file:edu.rice.cs.bioinfo.programs.phylonet.algos.network.InferMLNetworkFromSequences.java

public List<Tuple<Network, Double>> inferNetwork(String[] gtTaxa, List<char[][]> sequences,
        Map<String, String> allele2species, RateModel gtrsm, double theta, int maxReticulations, int numSol) {
    if (_optimalNetworks == null) {
        _optimalNetworks = new Network[numSol];
        _optimalScores = new double[numSol];
        Arrays.fill(_optimalScores, Double.NEGATIVE_INFINITY);
    }// ww w . j  a  v a  2s  . c  o m

    List<Tuple<char[], Integer>> distinctSequences = summarizeSquences(sequences);
    String startingNetwork = _startNetwork.toString();

    for (int i = 0; i < _numRuns; i++) {
        System.out.println("Run #" + i);
        DirectedGraphToGraphAdapter<String, PhyloEdge<String>> speciesNetwork = makeNetwork(startingNetwork);
        NetworkNeighbourhoodRandomWalkGenerator<DirectedGraphToGraphAdapter<String, PhyloEdge<String>>, String, PhyloEdge<String>> allNeighboursStrategy = new NetworkNeighbourhoodRandomWalkGenerator<DirectedGraphToGraphAdapter<String, PhyloEdge<String>>, String, PhyloEdge<String>>(
                _operationWeight, makeNode, makeEdge, _seed);
        AllNeighboursHillClimberFirstBetter<DirectedGraphToGraphAdapter<String, PhyloEdge<String>>, String, PhyloEdge<String>, Double> searcher = new AllNeighboursHillClimberFirstBetter<DirectedGraphToGraphAdapter<String, PhyloEdge<String>>, String, PhyloEdge<String>, Double>(
                allNeighboursStrategy);
        Func1<DirectedGraphToGraphAdapter<String, PhyloEdge<String>>, Double> scorer = getScoreFunction(gtTaxa,
                allele2species, distinctSequences, gtrsm, theta);
        Comparator<Double> comparator = getDoubleScoreComparator();
        HillClimbResult<DirectedGraphToGraphAdapter<String, PhyloEdge<String>>, Double> result = searcher
                .search(speciesNetwork, scorer, comparator, _maxExaminations, maxReticulations, _maxFailure,
                        _diameterLimit); // search starts here
        if (resultFile != null) {
            try {
                BufferedWriter bw = new BufferedWriter(new FileWriter(resultFile, true));
                bw.append("Run #" + i + "\n");
                for (int j = 0; j < _optimalNetworks.length; j++) {
                    bw.append(_optimalScores[j] + ": " + _optimalNetworks[j].toString() + "\n");
                }
                bw.newLine();
                bw.close();
            } catch (Exception e) {
                System.err.println(e.getMessage());
                e.getStackTrace();
            }
        }
    }

    List<Tuple<Network, Double>> resultList = new ArrayList<Tuple<Network, Double>>();
    for (int i = 0; i < numSol; i++) {
        if (_optimalNetworks[i] != null)
            resultList.add(new Tuple<Network, Double>(_optimalNetworks[i], _optimalScores[i]));
    }
    //System.out.println("\n #Networks " + result.ExaminationsCount);
    return resultList;
}

From source file:de.thm.arsnova.socket.ARSnovaSocketIOServer.java

public void stopServer() {
    LOGGER.trace("In stopServer method of class: {}", getClass().getName());
    try {/*from ww w .  j  a  v  a 2  s  .  co m*/
        for (final SocketIOClient client : server.getAllClients()) {
            client.disconnect();
        }
    } catch (final Exception e) {
        /* If exceptions are not caught they could prevent the Socket.IO server from shutting down. */
        LOGGER.error("Exception caught on Socket.IO shutdown: {}", e.getStackTrace());
    }
    server.stop();

}

From source file:nl.b3p.kaartenbalie.reporting.ReportThread.java

public void run() {

    try {//w  w w.j a v a2  s. co  m
        EntityTransaction tx = em.getTransaction();

        long processStart = System.currentTimeMillis();

        Report report = new Report();
        tx = em.getTransaction();
        tx.begin();
        try {
            /*
             * Store all the parameters in the report...
             */
            report.setOrganization(organization);
            report.setStartDate(startDate);
            report.setEndDate(endDate);
            report.setName(name);
            String mime = (String) CastorXmlTransformer.getContentTypes().get(type);
            report.setReportMime(mime);

            em.persist(report);
            em.flush();
            tx.commit();
        } catch (Exception ex) {
            tx.rollback();
            throw ex;
        }

        try {
            Parameters parameters = new Parameters();
            parameters.setDateEnd(new org.exolab.castor.types.Date(endDate));
            parameters.setDateStart(new org.exolab.castor.types.Date(startDate));
            parameters.setId(Integer.toString(report.getId().intValue()));
            parameters.setOrganization(organization.getName());
            parameters.setTimeStamp(new Date());

            MonitorReport mr = createMonitorReport();

            Long procTime = new Long(System.currentTimeMillis() - processStart);
            parameters.setProcessingTime(procTime.longValue());
            mr.setParameters(parameters);
            report.setProcessingTime(procTime);

            if (type.equalsIgnoreCase(CastorXmlTransformer.HTML)) {
                CastorXmlTransformer cxt = new CastorXmlTransformer(xsl, MyEMFDatabase.localPath());
                report.setReportXML(cxt.createHtml(mr));
            } else {
                CastorXmlTransformer cxt = new CastorXmlTransformer();
                report.setReportXML(cxt.createXml(mr));
            }
        } catch (Exception e) {
            StringBuffer rerror = new StringBuffer();
            rerror.append("<error>");
            rerror.append(e.getLocalizedMessage());

            StackTraceElement[] ste = e.getStackTrace();
            if (ste.length > 0) {
                rerror.append(" at ");
                rerror.append(ste[0].toString());
            }
            rerror.append("</error>");
            report.setReportXML(rerror.toString());
        }

        tx = em.getTransaction();
        tx.begin();
        try {
            em.merge(report);
            em.flush();
            tx.commit();
        } catch (Exception ex) {
            tx.rollback();
            throw ex;
        }
    } catch (Exception e) {
        log.error("", e);
    } finally {
        log.debug("Closing local entity manager ......");
        if (em != null && em.isOpen()) {
            em.close();
        }
        em = null;
    }
}

From source file:com.castis.xylophone.adsmadapter.convert.axistree.ConvertBannerAxisTreeDTO.java

public int mergeBannerTreeNode(Date date, ADSMSchedulerLogDTO schedulerLog, ADSMJobNameType srcJopType,
        String treeName, String publisher, Platform platformType) throws Exception {
    if (schedulerLog == null) {
        throw new CiRuntimeException("ADSMSchedulerLog is null");
    }/*  ww  w  . j  a  v  a 2s .co  m*/

    if (treeName == null || treeName.isEmpty()) {
        throw new CiRuntimeException("Cannot find treeName in generating MenuTree");
    }

    log.info("TreeName : " + treeName + ", srcDataType : " + srcJopType + ". Start Update("
            + schedulerLog.getParam() + ")");

    int treeID = 0;

    try {
        //?, , ,  ?
        //tambourineConnector.initializeInventoryCube(date);
        NodeDTO rootNodeDTO = getRootNode(ROOT_NODE_NAME);
        if (rootNodeDTO == null) {
            throw new CiRuntimeException("Fail to Update Banner Tree (Cannot Check root node Info. "
                    + schedulerLog.getParam() + ")");
        }

        treeID = tambourineConnector.getAxisTreeId(TreeType.BANNER_AXIS_TREE, treeName, publisher, platformType,
                false);
        //?
        if (treeID <= 0)
            treeID = tambourineConnector.generateTree(treeName, ROOT_NODE_NAME, TreeType.BANNER_AXIS_TREE,
                    publisher, platformType);

        List<ClientUIData> ClientUIDataList = tambourineConnector.getClientUIDataByType(ClientUIType.BANNER);

        int linkTreeId = -1;
        linkTreeId = makeTreeNode(treeID, date, rootNodeDTO.getExternalNodeId(), ClientUIDataList, publisher,
                platformType);

        tambourineConnector.insertTreeLogNSyncNoticeboard(linkTreeId, TreeType.BANNER_AXIS_TREE,
                Constants.tree.SCENE_TREE_NAME, null, publisher, platformType);
        tambourineConnector.insertTreeLogNSyncNoticeboard(treeID, TreeType.BANNER_AXIS_TREE,
                Constants.tree.BANNER_TREE_NAME, null, publisher, platformType);

        schedulerLog.setSchedulerStatus(ADSMSchedulerStatus.SUCCESS);
        TheLogger.getWriter().info("Update Banner Tree Success");
    } catch (Exception e) {
        //log.error("",e);
        TheLogger.getWriter().error("Fail to Update Banner Tree");
        log.error("Fail to Update Banner Tree");
        schedulerLog.setMessage(e.getMessage());
        schedulerLog.setSchedulerStatus(ADSMSchedulerStatus.FAIL);
        StackTraceElement[] stackTraces = e.getStackTrace();
        if (stackTraces.length > 0) {
            schedulerLog.setFailProcess(stackTraces[0].getClassName() + " - " + stackTraces[0].getMethodName()
                    + "(" + stackTraces[0].getLineNumber() + ")");
        }
        throw e;
    }
    return treeID;
}

From source file:org.apache.lucene.gdata.storage.lucenestorage.StorageImplementation.java

/**
 * @see org.apache.lucene.gdata.storage.Storage#deleteFeed(java.lang.String)
 *///from   w ww  . j av  a 2s.c om
public void deleteFeed(String feedId) throws StorageException {
    if (feedId == null)
        throw new StorageException("can not delete feed id is null ");
    ReferenceCounter<StorageQuery> query = null;
    try {
        query = this.controller.getStorageQuery();
        if (!query.get().isFeedStored(feedId))
            throw new StorageException("Account does not exist");
        StorageModifier modifier = this.controller.getStorageModifier();

        modifier.deleteFeed(feedId);

    } catch (Exception e) {
        LOG.error("Can't delete feed -- " + e.getMessage(), e);
        StorageException ex = new StorageException("Can't create feed -- " + e.getMessage(), e);
        ex.setStackTrace(e.getStackTrace());
        throw ex;

    } finally {
        if (query != null)
            query.decrementRef();
    }
}