Example usage for java.io IOException getStackTrace

List of usage examples for java.io IOException getStackTrace

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Introduction

In this page you can find the example usage for java.io IOException getStackTrace.

Prototype

public StackTraceElement[] getStackTrace()

Source Link

Document

Provides programmatic access to the stack trace information printed by #printStackTrace() .

Usage

From source file:org.apache.taverna.security.credentialmanager.impl.CredentialManagerImplTest.java

@After
// Clean up the credentialManagerDirectory we created for testing
public void cleanUp() {
    //      assertTrue(credentialManagerDirectory.exists());
    //      assertFalse(credentialManagerDirectory.listFiles().length == 0); // something was created there

    if (credentialManagerDirectory.exists()) {
        try {//from w ww . j a va 2  s .co m
            FileUtils.deleteDirectory(credentialManagerDirectory);
            System.out.println(
                    "Deleting Credential Manager's directory: " + credentialManagerDirectory.getAbsolutePath());
        } catch (IOException e) {
            System.out.println(e.getStackTrace());
        }
    }
}

From source file:org.cvrgrid.waveform.WaveformGlobusConnect.java

/**
 * Private API that activates an endpoint for the transfer.
 *//*from w ww.java2  s. c o  m*/
private Status activateEP(GlobusConnectConfiguration globusConnectConfiguration, String EpUsername,
        String EpPassword, String endpoint) {

    String myProxy = globusConnectConfiguration.getDestinationMyProxy();

    System.out.println("Activating Endpoint: " + endpoint);
    try {

        JSONTransferAPIClient client = globusConnectConfiguration.getClient();
        org.globusonline.transfer.Example GOClient = new Example(client);

        if (EpUsername == null || EpUsername == "") {
            System.out.println(
                    "EP username and password is null. Attempting Autoactivations without username/passwd.");
            if (!GOClient.autoActivate(endpoint)) {
                System.err.println("Unable to auto activate GO endpoint : " + endpoint);
                return Status.FAIL;
            }
        } else {
            if (myproxyActivateEP(client, EpUsername, EpPassword, endpoint, myProxy).equals(Status.FAIL)) {
                System.err.println("Unable to activate GO endpoint : " + endpoint);
                return Status.FAIL;
            }
        }
        return Status.OK;

    } catch (IOException e) {
        System.err.println("Got an IO exception..\n");
        System.err.println(e.getMessage());
        System.err.println(e.getStackTrace().toString());

        e.printStackTrace();
        return Status.FAIL;
    } catch (JSONException e) {
        System.err.println("Got an JSON exception..\n");
        System.err.println(e.getMessage());
        System.err.println(e.getStackTrace().toString());
        e.printStackTrace();
        return Status.FAIL;
    } catch (GeneralSecurityException e) {
        System.err.println("Got an Security exception..\n");
        System.err.println(e.getMessage());
        System.err.println(e.getStackTrace().toString());
        e.printStackTrace();
        return Status.FAIL;
    } catch (APIError e) {
        System.err.println("Got an APIError exception..\n");
        System.err.println(e.getMessage());
        System.err.println(e.getStackTrace().toString());
        e.printStackTrace();
        return Status.FAIL;
    }

}

From source file:org.cvrgrid.waveform.WaveformGlobusConnect.java

private Status myproxyActivateEP(JSONTransferAPIClient client, String myproxyUsername, String myproxyPassphrase,
        String endpointName, String myproxyHostname) {

    System.out.println("Activating Endpoint using myproxy: " + endpointName);

    try {//from   ww  w .java2s  .co  m
        String url = client.endpointPath(endpointName) + "/activation_requirements";
        JSONTransferAPIClient.Result r = client.getResult(url);

        // Go through requirements and find the myproxy type, then fill
        // in with the values from the function^Wmethod parameters.
        System.out.println("Endpoint activated:" + r.document.getString("activated"));
        JSONArray reqsArray = r.document.getJSONArray("DATA");
        for (int i = 0; i < reqsArray.length(); i++) {
            JSONObject reqObject = reqsArray.getJSONObject(i);
            if (reqObject.getString("type").equals("myproxy")) {
                String name = reqObject.getString("name");
                if (name.equals("hostname")) {
                    reqObject.put("value", myproxyHostname);
                } else if (name.equals("username")) {
                    reqObject.put("value", myproxyUsername);
                } else if (name.equals("passphrase")) {
                    reqObject.put("value", myproxyPassphrase);
                }
                // optional arguments are 'server_dn', required if the hostname
                // does not match the DN in the server's certificate, and
                // 'lifetime_in_hours', to ask for a specific lifetime rather
                // than accepting the server default.
                // See also:
                //  https://transfer.api.globusonline.org/v0.10/document_type/activation_requirements/example?format=json
            }
        }

        url = client.endpointPath(endpointName) + "/activate";
        r = client.postResult(url, r.document);

        // return r; yge: should check on r to determine what to return
        if (r.statusCode >= 400) {

            System.err.println("Returned statusCode >=400 : " + r.statusCode + "\n");
            return Status.FAIL;
        }
        return Status.OK;

    } catch (IOException e) {
        System.err.println("Got an IO exception..\n");
        System.err.println(e.getMessage());
        System.err.println(e.getStackTrace().toString());

        e.printStackTrace();
        return Status.FAIL;
    } catch (JSONException e) {
        System.err.println("Got an JSON exception..\n");
        System.err.println(e.getMessage());
        System.err.println(e.getStackTrace().toString());
        e.printStackTrace();
        return Status.FAIL;
    } catch (GeneralSecurityException e) {
        System.err.println("Got an Security exception..\n");
        System.err.println(e.getMessage());
        System.err.println(e.getStackTrace().toString());
        e.printStackTrace();
        return Status.FAIL;
    } catch (APIError e) {
        System.err.println("Got an APIError exception..\n");
        System.err.println(e.getMessage());
        System.err.println(e.getStackTrace().toString());
        e.printStackTrace();
        return Status.FAIL;
    }

}

From source file:com.spinn3r.api.BaseClient.java

protected URLConnection getConnection(String resource) throws IOException {

    URLConnection conn = null;/*w w  w .  j  a  v a  2 s  .c  o  m*/

    try {

        // create the HTTP connection.
        URL request = new URL(resource);
        conn = request.openConnection();

        // set the UserAgent so Spinn3r know which client lib is calling.
        conn.setRequestProperty(USER_AGENT_HEADER, USER_AGENT + "; " + getConfig().getCommandLine());
        conn.setRequestProperty(ACCEPT_ENCODING_HEADER, GZIP_ENCODING);
        conn.setConnectTimeout(20000);
        conn.connect();

    }

    catch (IOException ioe) {

        //create a custom exception message with the right error.
        String message = conn.getHeaderField(null);
        IOException ce = new IOException(message);
        ce.setStackTrace(ioe.getStackTrace());

        throw ce;
    }

    return conn;
}

From source file:org.vpac.web.controller.DataController.java

@RequestMapping(value = "/Plot", method = RequestMethod.GET)
public ModelAndView plot(@RequestParam(required = true) String datasetId,
        @RequestParam(required = false) String bandName, @RequestParam(required = true) double x,
        @RequestParam(required = true) double y, @RequestParam(required = false) Date start,
        @RequestParam(required = false) Date end, @RequestParam(required = false) boolean omitNodata,
        Model model) throws IOException, InvalidRangeException, QueryConfigurationException {
    Dataset ds = null;//from ww  w .j av  a 2s .co m
    if (datasetId.contains("/")) {
        String[] splittedDatasetId = datasetId.split("/");
        String name = splittedDatasetId[0];
        CellSize resolution = CellSize.fromHumanString(splittedDatasetId[1]);
        ds = datasetDao.findDatasetByName(name, resolution);
    } else {
        ds = datasetDao.retrieve(datasetId);
    }
    if (ds == null)
        return null;

    List<TimeSlice> tsList = datasetDao.findTimeSlices(ds.getId(), start, end);
    if (tsList == null)
        return null;

    List<Band> bands = null;
    if (bandName == null || bandName == "") {
        bands = datasetDao.getBands(ds.getId());
    } else {
        List<String> bandNames = new ArrayList<String>();
        bandNames.add(bandName);
        bands = datasetDao.findBandsByName(ds.getId(), bandNames);
    }
    if (bands == null)
        return null;

    RsaAggregationFactory factory = new RsaAggregationFactory();
    ModelAndView modelNView = new ModelAndView("DisplayPlot");

    try {
        AggregationDefinition def = factory.create(ds, tsList, bands, new Box(x, y, x, y));
        log.info("TS0:" + tsList.get(0).getCreated());
        log.info("TSN:" + tsList.get(tsList.size() - 1).getCreated());
        AggregationOpener opener = new AggregationOpener();
        NetcdfDataset dataset = opener.open(def, "");
        Variable varx = dataset.findVariable("x");
        Variable vary = dataset.findVariable("y");
        int xIndex = getArrayIndex(varx, x);
        int yIndex = getArrayIndex(vary, y);

        int[] origin = new int[] { 0, yIndex, xIndex };
        int[] shape = new int[] { tsList.size(), 1, 1 };

        Map<String, List<Pair>> bandPlotPair = new HashMap<String, List<Pair>>();
        Array ar = null;
        NodataStrategyFactory ndsfac = new NodataStrategyFactory();
        for (Band b : bands) {
            Variable var = dataset.findVariable(b.getName());
            Type type = Type.get(var.getDataType(), var.isUnsigned());
            NodataStrategy nds = ndsfac.create(var, type);
            ar = var.read(origin, shape);
            ArrayAdapter arradapt = ArrayAdapterImpl.createAndPromote(ar, var.getDataType(), nds);
            List<Pair> plotValues = new ArrayList<Pair>();
            for (int i = 0; i < ar.getIndex().getSize(); i++) {
                ScalarElement elem = arradapt.get(i);
                Date timeval = tsList.get(i).getCreated();
                if (elem.isValid())
                    plotValues.add(new Pair(timeval, elem.doubleValue()));
                else if (!omitNodata)
                    plotValues.add(new Pair(timeval, null));
            }
            bandPlotPair.put(b.getName(), plotValues);
        }
        modelNView.addObject("bandPlotValues", bandPlotPair);
        modelNView.addObject("datasetName", ds.getName());
        modelNView.addObject("pointX", x);
        modelNView.addObject("pointY", y);

        model.addAttribute(ControllerHelper.RESPONSE_ROOT, new DatasetPlotResponse(tsList, ar));

    } catch (IOException e) {
        log.error(e.getStackTrace().toString());
        throw e;
    }

    return modelNView;
}

From source file:es.bsc.servicess.ide.PackagingUtils.java

private static void preInstrumentOrchestration(String runtime, String orchClass, List<String> methods,
        IFolder classes, List<Dependency> depLibraries, IProgressMonitor myProgressMonitor)
        throws CoreException {
    Runtime rt = Runtime.getRuntime();
    if (runtime != null && orchClass != null && methods != null && methods.size() > 0) {
        String classpath = new String();
        for (Dependency d : depLibraries) {
            if (d.getType().equalsIgnoreCase(ProjectMetadata.JAR_DEP_TYPE)
                    || d.getType().equalsIgnoreCase(ProjectMetadata.CLASS_FOLDER_DEP_TYPE))
                classpath = classpath.concat(":" + d.getLocation());
        }/*from   www  .  ja v  a  2s . c  o m*/
        boolean first = true;
        String methodsString = new String();
        for (String m : methods) {
            if (first) {
                methodsString = methodsString.concat(m);
                first = false;
            } else
                methodsString = methodsString.concat(" " + m);
        }
        String command = new String(runtime + "/../scripts/pre_instrument.sh "
                + classes.getLocation().toOSString() + classpath + " " + runtime + "/.." + " "
                + classes.getLocation().toOSString() + " " + orchClass + " " + methodsString);
        log.debug("Command to exec: " + command);
        Process ps;
        try {
            ps = rt.exec(command);
            BufferedReader stdInput = new BufferedReader(new InputStreamReader(ps.getInputStream()));

            BufferedReader stdError = new BufferedReader(new InputStreamReader(ps.getErrorStream()));
            String s = null;
            // read the output from the command
            log.debug("Here is the standard output of the command:\n");
            while ((s = stdInput.readLine()) != null) {
                log.debug(s);
            }

            // read any errors from the attempted command
            log.debug("Here is the standard error of the command (if any):\n");
            while ((s = stdError.readLine()) != null) {
                log.debug(s);
            }

            // if (ps.exitValue() != 0){
            if (ps.waitFor() != 0) {
                throw (new CoreException(
                        new Status(IStatus.ERROR, Activator.PLUGIN_ID, "metadata info not found")));
            }
        } catch (IOException e) {
            CoreException ce = new CoreException(
                    new Status(IStatus.ERROR, Activator.PLUGIN_ID, e.getMessage(), e));
            ce.setStackTrace(e.getStackTrace());
            throw (ce);
        } catch (InterruptedException e) {
            CoreException ce = new CoreException(
                    new Status(IStatus.ERROR, Activator.PLUGIN_ID, e.getMessage(), e));
            ce.setStackTrace(e.getStackTrace());
            throw (ce);
        }
    } else {
        throw (new CoreException(new Status(IStatus.ERROR, Activator.PLUGIN_ID, "metadata info not found")));
    }
}

From source file:es.bsc.servicess.ide.PackagingUtils.java

private static void instrumentOrchestrations(String runtime, String[] cls, IFolder classes,
        List<Dependency> depLibraries, IProgressMonitor myProgressMonitor) throws CoreException {
    Runtime rt = Runtime.getRuntime();
    if (runtime != null && cls != null) {
        String classpath = new String();
        for (Dependency d : depLibraries) {
            if (d.getType().equalsIgnoreCase(ProjectMetadata.JAR_DEP_TYPE)
                    || d.getType().equalsIgnoreCase(ProjectMetadata.CLASS_FOLDER_DEP_TYPE))
                classpath = classpath.concat(":" + d.getLocation());
        }/*from ww  w  .  jav a 2 s  . co m*/
        for (String cl : cls) {
            String command = new String(
                    runtime + "/../scripts/instrument.sh " + cl + " " + classes.getLocation().toOSString()
                            + classpath + " " + runtime + "/.." + " " + classes.getLocation().toOSString());
            log.debug("Command to exec: " + command);
            Process ps;
            try {
                ps = rt.exec(command);
                BufferedReader stdInput = new BufferedReader(new InputStreamReader(ps.getInputStream()));

                BufferedReader stdError = new BufferedReader(new InputStreamReader(ps.getErrorStream()));
                String s = null;
                // read the output from the command
                log.debug("Here is the standard output of the command:\n");
                while ((s = stdInput.readLine()) != null) {
                    log.debug(s);
                }

                // read any errors from the attempted command
                log.debug("Here is the standard error of the command (if any):\n");
                while ((s = stdError.readLine()) != null) {
                    log.debug(s);
                }

                // if (ps.exitValue() != 0){
                if (ps.waitFor() != 0) {
                    throw (new CoreException(
                            new Status(IStatus.ERROR, Activator.PLUGIN_ID, "metadata info not found")));
                }
            } catch (IOException e) {
                CoreException ce = new CoreException(
                        new Status(IStatus.ERROR, Activator.PLUGIN_ID, e.getMessage(), e));
                ce.setStackTrace(e.getStackTrace());
                throw (ce);
            } catch (InterruptedException e) {
                CoreException ce = new CoreException(
                        new Status(IStatus.ERROR, Activator.PLUGIN_ID, e.getMessage(), e));
                ce.setStackTrace(e.getStackTrace());
                throw (ce);
            }

        }
    } else {
        throw (new CoreException(new Status(IStatus.ERROR, Activator.PLUGIN_ID, "metadata info not found")));
    }

}

From source file:com.loloof64.android.capturing_audio.MainActivity.java

public void recordingButtonClicked(View view) {
    try {// w w w . j  av  a2  s . c om
        recorderFragment.toggleRecordingState();
    } catch (IOException e) {
        Log.e("RecordingAudio", e.getMessage(), e);
        ///////////////////////////////////////////////////////////////////////
        AlertDialog.Builder dialogBuilder = new AlertDialog.Builder(this);
        dialogBuilder.setTitle("Error");

        ScrollView scrollingView = new ScrollView(dialogBuilder.getContext());
        scrollingView.setLayoutParams(new ViewGroup.LayoutParams(ViewGroup.LayoutParams.MATCH_PARENT,
                ViewGroup.LayoutParams.MATCH_PARENT));
        EditText textView = new EditText(dialogBuilder.getContext());
        textView.setLayoutParams(new ScrollView.LayoutParams(ViewGroup.LayoutParams.MATCH_PARENT,
                ViewGroup.LayoutParams.MATCH_PARENT));
        textView.setText(Arrays.toString(e.getStackTrace()));

        scrollingView.addView(textView);
        dialogBuilder.setView(scrollingView);

        dialogBuilder.setPositiveButton("OK", new DialogInterface.OnClickListener() {
            @Override
            public void onClick(DialogInterface dialog, int which) {
                dialog.dismiss();
            }
        });
        dialogBuilder.show();
        ////////////////////////////////////////////////////////////////////////
        Toast.makeText(this, R.string.could_not_create_temporary_file, Toast.LENGTH_SHORT).show();
    }
}

From source file:com.cyberway.issue.io.arc.ARCReader.java

/**
 * Create new arc record./* ww w  .j  ava2  s.  co m*/
 *
 * Encapsulate housekeeping that has to do w/ creating a new record.
 *
 * <p>Call this method at end of constructor to read in the
 * arcfile header.  Will be problems reading subsequent arc records
 * if you don't since arcfile header has the list of metadata fields for
 * all records that follow.
 * 
 * <p>When parsing through ARCs writing out CDX info, we spend about
 * 38% of CPU in here -- about 30% of which is in getTokenizedHeaderLine
 * -- of which 16% is reading.
 *
 * @param is InputStream to use.
 * @param offset Absolute offset into arc file.
 * @return An arc record.
 * @throws IOException
 */
protected ARCRecord createArchiveRecord(InputStream is, long offset) throws IOException {
    ArrayList<String> firstLineValues = new ArrayList<String>(20);
    getTokenizedHeaderLine(is, firstLineValues);
    int bodyOffset = 0;
    if (offset == 0 && isAlignedOnFirstRecord()) {
        // If offset is zero and we were aligned at first record on
        // creation (See #alignedOnFirstRecord for more on this), then no
        // records have been read yet and we're reading our first one, the
        // record of ARC file meta info.  Its special.  In ARC versions
        // 1.x, first record has three lines of meta info. We've just read
        // the first line. There are two more.  The second line has misc.
        // info.  We're only interested in the first field, the version
        // number.  The third line is the list of field names. Here's what
        // ARC file version 1.x meta content looks like:
        //
        // filedesc://testIsBoundary-JunitIAH200401070157520.arc 0.0.0.0 \\
        //      20040107015752 text/plain 77
        // 1 0 InternetArchive
        // URL IP-address Archive-date Content-type Archive-length
        //
        ArrayList<String> secondLineValues = new ArrayList<String>(20);
        bodyOffset += getTokenizedHeaderLine(is, secondLineValues);
        setVersion((String) secondLineValues.get(0) + "." + (String) secondLineValues.get(1));
        // Just read over the 3rd line.  We used to parse it and use
        // values found here but now we just hardcode them to avoid
        // having to read this 3rd line even for random arc file accesses.
        bodyOffset += getTokenizedHeaderLine(is, null);
    }

    try {
        currentRecord(
                new ARCRecord(is,
                        (ArchiveRecordHeader) computeMetaData(this.headerFieldNameKeys, firstLineValues,
                                getVersion(), offset),
                        bodyOffset, isDigest(), isStrict(), isParseHttpHeaders()));
    } catch (IOException e) {
        if (e instanceof RecoverableIOException) {
            // Don't mess with RecoverableIOExceptions.  Let them out.
            throw e;
        }
        IOException newE = new IOException(e.getMessage() + " (Offset " + offset + ").");
        newE.setStackTrace(e.getStackTrace());
        throw newE;
    }
    return (ARCRecord) getCurrentRecord();
}

From source file:listener.Handler.java

License:asdf

private void switchPower(String[] message) {
    if (acc.hasAccountPrivilege(AccountPrivileges.PERM_CMD_SWITCHPOWER)) {
        // if (message.length > )
        if (message.length > 3) {
            String infoString = "Executing switch command";
            if (verbose)
                Logger.logMessage('I', this, infoString);
            this.replyMessage(infoString);

            if (verbose)
                Logger.logMessage('I', this, "infoString");
            try {
                Runtime.getRuntime().exec("sudo send " + message[1] + " " + message[2] + " " + message[3]);
            } catch (IOException e) {
                String error = "Error when trying to execute send command";
                Logger.logException('E', error, e);
                this.replyMessage(error + " " + e.getMessage() + System.lineSeparator() + e.getStackTrace());
            }//w  w  w  .j a v  a 2 s. c  o m
        } else {
            String error = "usage: switchOn <systemID> <unitID>; switchOff <systemID> <unitID>; switch <systemID> <unitID> <state>; see help for more information.";
            // TODO: Multi-line messages
            Logger.logMessage('E', "not enough arguments for switchOn command. " + error);
            this.replyMessage(error);
        }
    } else {
        this.noPermAns("switchPower");
    }
}