Example usage for java.io File setExecutable

List of usage examples for java.io File setExecutable

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Introduction

In this page you can find the example usage for java.io File setExecutable.

Prototype

public boolean setExecutable(boolean executable)

Source Link

Document

A convenience method to set the owner's execute permission for this abstract pathname.

Usage

From source file:org.jboss.qa.jenkins.test.executor.utils.unpack.GUnZipper.java

@Override
public void unpack(File archive, File destination) throws IOException {
    try (FileInputStream in = new FileInputStream(archive);
            GzipCompressorInputStream gzIn = new GzipCompressorInputStream(in);
            TarArchiveInputStream tarIn = new TarArchiveInputStream(gzIn)) {
        final Set<TarArchiveEntry> entries = getEntries(tarIn);

        if (ignoreRootFolders) {
            pathSegmentsToTrim = countRootFolders(entries);
        }// w  w  w . jav a2  s .com

        for (TarArchiveEntry entry : entries) {
            if (entry.isDirectory()) {
                continue;
            }

            final File file = new File(destination, trimPathSegments(entry.getName(), pathSegmentsToTrim));
            if (!file.getParentFile().exists()) {
                file.getParentFile().mkdirs();
            }

            try (FileOutputStream fos = new FileOutputStream(file)) {
                IOUtils.copy(tarIn, fos);

                // check for user-executable bit on entry and apply to file
                if ((entry.getMode() & 0100) != 0) {
                    file.setExecutable(true);
                }
            }
        }
    }
}

From source file:ddf.content.plugin.video.VideoThumbnailPlugin.java

private void copyFFmpegBinary(final InputStream inputStream) throws IOException {
    final File ffmpegBinary = new File(ffmpegPath);

    if (!ffmpegBinary.exists()) {
        FileUtils.copyInputStreamToFile(inputStream, ffmpegBinary);
        if (!ffmpegBinary.setExecutable(true)) {
            LOGGER.warn(/*from  w  w  w. jav a 2 s  . co  m*/
                    "Couldn't make FFmpeg binary at {} executable. It must be executable by its owner for the plugin to work.",
                    ffmpegPath);
        }
    }
}

From source file:org.apache.stratos.cartridge.agent.test.JavaCartridgeAgentTest.java

/**
 * Setup the JCA test path, copy test configurations
 *
 * @return//www . j a v  a2 s .co  m
 */
private String setupJavaAgent() {
    try {
        log.info("Setting up Java cartridge agent test setup");
        String jcaZipSource = getResourcesFolderPath()
                + "/../../../../products/cartridge-agent/modules/distribution/target/" + AGENT_NAME + ".zip";
        String testHome = getResourcesFolderPath() + "/../" + UUID.randomUUID() + "/";
        File agentHome = new File(testHome + AGENT_NAME);
        log.info("Extracting Java Cartridge Agent to test folder");
        ZipFile agentZip = new ZipFile(jcaZipSource);
        ProgressMonitor zipProgresMonitor = agentZip.getProgressMonitor();
        agentZip.extractAll(testHome);
        while (zipProgresMonitor.getPercentDone() < 100) {
            log.info("Extracting: " + zipProgresMonitor.getPercentDone());
            try {
                Thread.sleep(100);
            } catch (InterruptedException e) {
                e.printStackTrace();
            }
        }

        log.info("Copying agent jar");
        String agentJar = "org.apache.stratos.cartridge.agent-4.2.0-SNAPSHOT.jar";
        String agentJarSource = getResourcesFolderPath() + "/../" + agentJar;
        String agentJarDest = agentHome.getCanonicalPath() + "/lib/" + agentJar;
        FileUtils.copyFile(new File(agentJarSource), new File(agentJarDest));

        log.info("Copying test payload file");
        String srcPayloadPath = getResourcesFolderPath() + "/../../src/test/resources/payload";
        String destPayloadPath = agentHome + "/payload";
        FileUtils.copyDirectory(new File(srcPayloadPath), new File(destPayloadPath));

        log.info("Copying test conf files");
        String srcConf = getResourcesFolderPath() + "/../../src/test/resources/conf";
        String destConf = agentHome + "/conf";
        FileUtils.copyDirectory(new File(srcConf), new File(destConf));

        log.info("Copying test stratos.sh script");
        String srcBin = getResourcesFolderPath() + "/../../src/test/resources/bin";
        String destBin = agentHome + "/bin";
        FileUtils.copyDirectory(new File(srcBin), new File(destBin));

        log.info("Changing stratos.sh permissions");
        new File(agentHome.getCanonicalPath() + "/bin/stratos.sh").setExecutable(true);
        log.info("Changed permissions for stratos.sh");

        log.info("Changing extension scripts permissions");
        File extensionsPath = new File(agentHome.getCanonicalPath() + "/extensions/");
        File[] extensions = extensionsPath.listFiles();
        for (File extension : extensions) {
            extension.setExecutable(true);
        }
        log.info("Changed permissions for extensions : " + outputStream);

        log.info("Java cartridge agent setup complete.");

        return agentHome.getCanonicalPath();
    } catch (IOException e) {
        String message = "Could not copy cartridge agent distribution";
        log.error(message, e);
        throw new RuntimeException(message, e);
    } catch (ZipException e) {
        String message = "Could not unzip cartridge agent distribution. Please make sure to build <STRATOS_HOME>/products/cartridge-agent first.";
        log.error(message, e);
        throw new RuntimeException(message, e);
    }
}

From source file:org.jboss.qa.jenkins.test.executor.utils.unpack.UnZipper.java

@Override
public void unpack(File archive, File destination) throws IOException {
    try (ZipFile zip = new ZipFile(archive)) {
        final Set<ZipArchiveEntry> entries = new HashSet<>(Collections.list(zip.getEntries()));

        if (ignoreRootFolders) {
            pathSegmentsToTrim = countRootFolders(entries);
        }//from ww  w .j  ava2  s .c  o  m

        for (ZipArchiveEntry entry : entries) {
            if (entry.isDirectory()) {
                continue;
            }
            final String zipPath = trimPathSegments(entry.getName(), pathSegmentsToTrim);
            final File file = new File(destination, zipPath);
            if (!file.getParentFile().exists()) {
                file.getParentFile().mkdirs(); // Create parent folders if not exist
            }

            try (InputStream is = zip.getInputStream(entry); OutputStream fos = new FileOutputStream(file)) {
                IOUtils.copy(is, fos);
                // check for user-executable bit on entry and apply to file
                if ((entry.getUnixMode() & 0100) != 0) {
                    file.setExecutable(true);
                }
            }
            file.setLastModified(entry.getTime());
        }
    }
}

From source file:de.tudarmstadt.ukp.dkpro.core.api.resources.RuntimeProvider.java

public void install() throws IOException {
    if (installed) {
        return;/*from  ww  w .  j a  v a2  s .  com*/
    }

    Properties manifest = getManifest();
    for (String filename : manifest.stringPropertyNames()) {
        URL source = resolveLocation(baseLocation + platform + "/" + filename, this, null);
        File target = new File(getWorkspace(), filename);
        InputStream is = null;
        OutputStream os = null;
        try {
            is = source.openStream();
            os = new FileOutputStream(target);
            IOUtils.copyLarge(is, os);
        } finally {
            closeQuietly(is);
            closeQuietly(os);
        }

        if (MODE_EXECUTABLE.equals(manifest.getProperty(filename))) {
            target.setExecutable(true);
        }

        target.deleteOnExit();
    }

    installed = true;
}

From source file:edu.isi.wings.portal.controllers.ComponentController.java

public boolean initializeComponentFiles(String cid, String lang) {
    try {/*from w  w  w .j a  va 2 s.  c o m*/
        Component c = cc.getComponent(cid, true);
        String loc = c.getLocation();
        if (loc == null) {
            loc = cc.getDefaultComponentLocation(cid);
            c.setLocation(loc);
            cc.setComponentLocation(cid, loc);
            cc.save();
        }

        // Copy io.sh from resources
        ClassLoader classloader = Thread.currentThread().getContextClassLoader();
        FileUtils.copyInputStreamToFile(classloader.getResourceAsStream("io.sh"), new File(loc + "/io.sh"));

        int numi = 0, nump = 0, numo = c.getOutputs().size();
        for (ComponentRole r : c.getInputs()) {
            if (r.isParam())
                nump++;
            else
                numi++;
        }

        String suffix = "";
        for (int i = 1; i <= numi; i++)
            suffix += " $INPUTS" + i;
        for (int i = 1; i <= nump; i++)
            suffix += " $PARAMS" + i;
        for (int i = 1; i <= numo; i++)
            suffix += " $OUTPUTS" + i;

        String runscript = "";
        String filename = null;
        for (String line : IOUtils.readLines(classloader.getResourceAsStream("run"))) {
            if (line.matches(".*io\\.sh.*")) {
                // Number of inputs and outputs
                line = ". $BASEDIR/io.sh " + numi + " " + nump + " " + numo + " \"$@\"";
            } else if (line.matches(".*generic_code.*")) {
                // Code invocation
                if (lang.equals("R")) {
                    filename = c.getName() + ".R";
                    line = "Rscript --no-save --no-restore $BASEDIR/" + filename;
                } else if (lang.equals("PHP")) {
                    filename = c.getName() + ".php";
                    line = "php $BASEDIR/" + filename;
                } else if (lang.equals("Python")) {
                    filename = c.getName() + ".py";
                    line = "python $BASEDIR/" + filename;
                } else if (lang.equals("Perl")) {
                    filename = c.getName() + ".pl";
                    line = "perl $BASEDIR/" + filename;
                } else if (lang.equals("Java")) {
                    line = "# Relies on existence of " + c.getName() + ".class file in this directory\n";
                    line += "java -classpath $BASEDIR " + c.getName();
                }
                // Add inputs, outputs as suffixes
                line += suffix;
            }
            runscript += line + "\n";
        }
        File runFile = new File(loc + "/run");
        FileUtils.writeStringToFile(runFile, runscript);
        runFile.setExecutable(true);

        if (filename != null)
            new File(loc + "/" + filename).createNewFile();

    } catch (Exception e) {
        e.printStackTrace();
    } finally {
        cc.end();
        dc.end();
        prov.end();
    }
    return false;
}

From source file:com.sap.prd.mobile.ios.mios.XCodeCopySourcesMojo.java

private void copy(final File source, final File targetDirectory, final FileFilter excludes) throws IOException {

    for (final File sourceFile : source.listFiles()) {
        final File destFile = new File(targetDirectory, sourceFile.getName());
        if (sourceFile.isDirectory()) {

            if (excludes.accept(sourceFile)) {
                copy(sourceFile, destFile, excludes);
            } else {
                getLog().info("File '" + sourceFile + "' ommited.");
            }/* w w w.ja  v  a2s . com*/
        } else {
            FileUtils.copyFile(sourceFile, destFile);
            if (sourceFile.canExecute()) {
                destFile.setExecutable(true);
            }
            getLog().debug((destFile.canExecute() ? "Executable" : "File '") + sourceFile + "' copied to '"
                    + destFile + "'.");
        }
    }
}

From source file:it.drwolf.ridire.index.cwb.CWBFrequencyList.java

private String getFrequencyList(boolean deleteFLFile, List<String> semDescription, List<String> funDescription,
        int quantityP, String type, Integer threshold, boolean sorted) {
    CommandLine commandLine = CommandLine.parse(this.cwbscanExecutable);
    commandLine.addArgument("-q");
    if (threshold != null && threshold > 0) {
        commandLine.addArgument("-f");
        commandLine.addArgument(threshold + "");
    }//from  ww w. j a  va 2s  . c  o m
    commandLine.addArgument("-r").addArgument(this.cqpRegistry);
    commandLine.addArgument("-C");
    commandLine.addArgument(this.cqpCorpusName);
    if (type.equals("forma")) {
        commandLine.addArgument("word+0");
    } else if (type.equals("PoS")) {
        commandLine.addArgument("pos+0");
    } else if (type.equals("easypos")) {
        commandLine.addArgument("easypos+0");
    } else if (type.equals("lemma")) {
        commandLine.addArgument("lemma+0");
    } else if (type.equals("PoS-forma")) {
        commandLine.addArgument("pos+0");
        commandLine.addArgument("word+0");
    } else if (type.equals("PoS-lemma")) {
        commandLine.addArgument("pos+0");
        commandLine.addArgument("lemma+0");
    }
    String semFuncParam = "";
    if (funDescription != null && funDescription.size() > 0 && funDescription.get(0) != null
            && funDescription.get(0).trim().length() > 0
            || semDescription != null && semDescription.size() > 0 && semDescription.get(0) != null
                    && semDescription.get(0).trim().length() > 0) {
        semFuncParam = "?";
        if (funDescription != null && funDescription.size() > 0 && funDescription.get(0) != null
                && funDescription.get(0).trim().length() > 0) {
            String fd = StringUtils.join(funDescription, "\\|");
            semFuncParam += "text_functional=/\\(" + fd + "\\)/ ";
        }
        if (semDescription != null && semDescription.size() > 0 && semDescription.get(0) != null
                && semDescription.get(0).trim().length() > 0) {
            String sd = StringUtils.join(semDescription, "\\|");
            semFuncParam += "text_semantic=/\\(" + sd + "\\)/ ";

        }
        commandLine.addArgument(semFuncParam);
    }
    if (sorted) {
        commandLine.addArgument("|");
        commandLine.addArgument("sort");
        commandLine.addArgument("-nr");
        commandLine.addArgument("-k");
        commandLine.addArgument("1");
    }
    if (quantityP > 0) {
        commandLine.addArgument("|");
        commandLine.addArgument("head");
        commandLine.addArgument("-" + quantityP);
    }
    File flTempFile = null;
    try {
        flTempFile = File.createTempFile("ridireFL", null);
    } catch (IOException e) {
        // TODO Auto-generated catch block
        e.printStackTrace();
    }
    commandLine.addArgument(" > ");
    commandLine.addArgument(flTempFile.getAbsolutePath());
    String c = commandLine.toString();
    try {
        File tempSh = File.createTempFile("ridireSH", ".sh");
        FileUtils.writeStringToFile(tempSh, c);
        tempSh.setExecutable(true);
        commandLine = CommandLine.parse(tempSh.getAbsolutePath());
        DefaultExecutor executor = new DefaultExecutor();
        executor.setExitValue(0);
        ExecuteWatchdog watchdog = new ExecuteWatchdog(CWBFrequencyList.TIMEOUT);
        executor.setWatchdog(watchdog);
        ByteArrayOutputStream baosStdOut = new ByteArrayOutputStream(1024);
        ByteArrayOutputStream baosStdErr = new ByteArrayOutputStream(1024);
        ExecuteStreamHandler executeStreamHandler = new PumpStreamHandler(baosStdOut, baosStdErr, null);
        executor.setStreamHandler(executeStreamHandler);
        int exitValue = 0;
        exitValue = executor.execute(commandLine);
        FileUtils.deleteQuietly(tempSh);
        if (exitValue == 0) {
            StrTokenizer strTokenizer = new StrTokenizer();
            this.frequencyList = new ArrayList<FrequencyItem>();
            List<String> lines = FileUtils.readLines(flTempFile);
            for (String line : lines) {
                strTokenizer.reset(line);
                String[] tokens = strTokenizer.getTokenArray();
                if (tokens.length == 2) {
                    FrequencyItem frequencyItem = new FrequencyItem(tokens[1],
                            Integer.parseInt(tokens[0].trim()));
                    this.frequencyList.add(frequencyItem);
                } else if (tokens.length == 3) {
                    FrequencyItem frequencyItem = new FrequencyItem(tokens[2], tokens[1],
                            Integer.parseInt(tokens[0].trim()));
                    this.frequencyList.add(frequencyItem);
                }
            }
            if (deleteFLFile) {
                FileUtils.deleteQuietly(flTempFile);
            }
        }
    } catch (ExecuteException e) {
        // TODO Auto-generated catch block
        e.printStackTrace();
    } catch (IOException e) {
        // TODO Auto-generated catch block
        e.printStackTrace();
    }
    return flTempFile.getAbsolutePath();
}

From source file:org.apache.hadoop.hdfs.server.datanode.TestDataNodeVolumeFailureReporting.java

@After
public void tearDown() throws Exception {
    IOUtils.cleanup(LOG, fs);//w ww . j av a2 s. c  o m
    if (cluster != null) {
        for (File dir : cluster.getAllInstanceStorageDirs()) {
            dir.setExecutable(true);
        }
        IOUtils.cleanup(LOG, fs);
        cluster.shutdown();
    }
}

From source file:org.kalypso.kalypsomodel1d2d.sim.TelemacKalypsoSimulation.java

private File findTelemacBatch(final String exeVersionName, File tmpdir) throws CoreException {
    final File batchFile = new File(tmpdir, "runTelemacKalypso.bat"); //$NON-NLS-1$

    OutputStream batchOutStream = null;
    try {//from   w  w  w. j a v a 2s  .  c om
        batchOutStream = new BufferedOutputStream(new FileOutputStream(batchFile));

        Formatter formatter = new Formatter(batchOutStream);
        formatter.format("%s", exeVersionName);
        batchFile.setExecutable(true);
        formatter.close();
        batchOutStream.close();
    } catch (FileNotFoundException e) {
        e.printStackTrace();
    } catch (IOException e) {
        e.printStackTrace();
    }
    if (batchFile.exists())
        return batchFile;
    // final Location installLocation = Platform.getInstallLocation();
    // final File installDir = FileUtils.toFile( installLocation.getURL() );
    //    final File exeDir = new File( installDir, "bin" ); //$NON-NLS-1$
    // final File exeFile = new File( exeDir, exeName );
    // return exeFile;

    final String exeMissingMsg = String.format(
            Messages.getString("org.kalypso.kalypsomodel1d2d.sim.SWANCalculation.26"), //$NON-NLS-1$
            batchFile.getAbsolutePath());
    throw new CoreException(StatusUtilities.createErrorStatus(exeMissingMsg));
}