Example usage for java.io File getAbsoluteFile

Introduction

In this page you can find the example usage for java.io File getAbsoluteFile.

Prototype

public File getAbsoluteFile() 

Source Link

Document

Returns the absolute form of this abstract pathname.

Usage

From source file:cz.lbenda.rcp.DialogHelper.java

/** Ask user if file can be overwrite if file exist
 * @param file file which is rewrite//  www. ja  v  a  2  s. c  om
 * @param defaultExtension if file haven't extension then default is add
 * @return file if user want rewrite it, or no file with this name exist */
public File canBeOverwriteDialog(File file, String defaultExtension) {
    if (file == null) {
        return null;
    }
    if ("".equals(FilenameUtils.getExtension(file.getName()))) {
        file = new File(file.getAbsoluteFile() + "." + defaultExtension);
    }
    if (!file.exists()) {
        return file;
    }
    Alert alert = new Alert(Alert.AlertType.CONFIRMATION);
    alert.setTitle(msgCanOverwriteTitle);
    alert.setContentText(String.format(msgCanOverwriteContent, file.getName()));
    Optional<ButtonType> result = alert.showAndWait();
    return (result.isPresent()) && (result.get() == ButtonType.OK) ? file : null;
}

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From source file:chibi.gemmaanalysis.OutlierDetectionTestCli.java

@Override
protected Exception doWork(String[] args) {
    Exception err = processCommandLine(args);

    if (err != null) {
        return err;
    }//from www .  j  a va  2s. c  o m

    File file = new File(outputFileName);

    try {

        file.createNewFile();

        try (FileWriter fw = new FileWriter(file.getAbsoluteFile());
                BufferedWriter bw = new BufferedWriter(fw);) {

            if (useCombinedMethod)
                bw.write(HEADER_COMBINED);
            else if (findByMedian && useRegression)
                bw.write(HEADER_BY_MEDIAN_REG);
            else if (findByMedian)
                bw.write(HEADER_BY_MEDIAN);
            else if (useRegression) {
                bw.write(HEADER_REG);
            } else {
                bw.write(HEADER);
            }

            bw.newLine();

            for (BioAssaySet bas : expressionExperiments) {

                if (!(bas instanceof ExpressionExperiment))
                    continue;

                ExpressionExperiment ee = (ExpressionExperiment) bas;

                try {

                    OutlierDetectionTestDetails testDetails = findOutliers(ee);

                    if (useCombinedMethod) {
                        writeResultsToFileCombined(bw, ee, testDetails);
                    } else if (findByMedian) {
                        writeResultsToFileByMedian(bw, ee, testDetails);
                    } else {
                        writeResultsToFileBasic(bw, ee, testDetails);
                    }

                    bw.flush();

                } catch (Exception e) {
                    log.error("Error while processing " + ee + ": " + e.getMessage());
                    errorObjects.add(ee + ": " + e.getMessage());
                    continue;
                }

                successObjects.add(ee.toString());
            }

        }

    } catch (Exception e) {
        log.error("Caught exception: " + e);
    } finally {
        summarizeProcessing();
    }

    return null;
}

---

From source file:Json.JsonCodes.java

public void jsonCreate(String patchName) {
    JSONObject obj = new JSONObject();
    JSONArray ar = new JSONArray();

    for (int i = 0; i < this.pageList.size(); i++) {

        ar.add(this.pageList.get(i));
    }/*w w w .  j  a va  2  s .c  o  m*/
    obj.put("patch", this.patch);
    obj.put("page", ar);

    File file = new File(patchName);

    try {
        //?,  ?   ??  ? 
        if (!file.exists()) {
            file.createNewFile();
        }

        //PrintWriter ? ? ?  
        PrintWriter out = new PrintWriter(file.getAbsoluteFile());

        try {
            //? ?  
            out.print(obj);
        } finally {
            //?     
            //   ??
            out.close();
        }
    } catch (IOException e) {
        throw new RuntimeException(e);
    }
}

---

From source file:net.nicholaswilliams.java.licensing.encryption.TestFilePublicKeyDataProvider.java

@Test
public void testKeyFile01() throws IOException {
    final String fileName = "testKeyFile01.key";
    File file = new File(fileName);

    if (file.exists())
        FileUtils.forceDelete(file);/*  ww  w  .  j  av a2 s. c  o  m*/

    FilePublicKeyDataProvider provider = new FilePublicKeyDataProvider(fileName);

    assertNotNull("The key file should not be null.", provider.getPublicKeyFile());
    assertEquals("The key file is not correct.", file.getAbsoluteFile(), provider.getPublicKeyFile());
    assertFalse("The paths should not be the same.", fileName.equals(provider.getPublicKeyFile().getPath()));
    assertTrue("The paths should end the same.", provider.getPublicKeyFile().getPath().endsWith(fileName));
}

---

From source file:net.nicholaswilliams.java.licensing.encryption.TestFilePrivateKeyDataProvider.java

@Test
public void testKeyFile01() throws IOException {
    final String fileName = "testKeyFile01.key";
    File file = new File(fileName);

    if (file.exists())
        FileUtils.forceDelete(file);// w  w w.ja va  2s. co m

    FilePrivateKeyDataProvider provider = new FilePrivateKeyDataProvider(fileName);

    assertNotNull("The key file should not be null.", provider.getPrivateKeyFile());
    assertEquals("The key file is not correct.", file.getAbsoluteFile(), provider.getPrivateKeyFile());
    assertFalse("The paths should not be the same.", fileName.equals(provider.getPrivateKeyFile().getPath()));
    assertTrue("The paths should end the same.", provider.getPrivateKeyFile().getPath().endsWith(fileName));
}

---

From source file:net.sf.jclal.util.xml.XMLConfigurationReader.java

/**
 * Constructor/*from w w  w  . j a va 2 s.co m*/
 * 
 * @param file The file path of the xml configuration.
 * @throws Exception The exception that will be launched
 */
public XMLConfigurationReader(File file) throws Exception {
    this.file = file.getAbsoluteFile();

    initReader();
}

---

From source file:edu.ku.brc.specify.tasks.subpane.JasperReportsCache.java

/**
 * Checks to see if any files in the database need to be copied to the database. A file may not
 * exist or be out of date.//from   w w  w . java  2 s.  c  o m
 */
protected static void refreshCacheFromDatabase(final String mimeType) {
    File cachePath = getCachePath();

    Hashtable<String, File> hash = new Hashtable<String, File>();
    for (File f : cachePath.listFiles()) {
        //log.info("Report Cache File["+f.getName()+"]");
        hash.put(f.getName(), f);
    }

    for (AppResourceIFace ap : AppContextMgr.getInstance().getResourceByMimeType(mimeType)) {
        // Check to see if the resource or file has changed.
        boolean updateCache = false;
        File fileFromJasperCache = hash.get(ap.getName());
        if (fileFromJasperCache == null) {
            updateCache = true;

        } else {
            Date fileDate = new Date(fileFromJasperCache.lastModified());
            Timestamp apTime = ap.getTimestampModified() == null ? ap.getTimestampCreated()
                    : ap.getTimestampModified();
            updateCache = apTime == null || fileDate.getTime() < apTime.getTime();
        }

        // If it has changed then copy the contents into the cache and delete the compiled file
        // so it forces it to be recompiled.
        if (updateCache) {
            File localFilePath = new File(cachePath.getAbsoluteFile() + File.separator + ap.getName());
            try {
                XMLHelper.setContents(localFilePath, ap.getDataAsString());

                File compiledFile = getCompiledFile(localFilePath);
                if (compiledFile.exists()) {
                    compiledFile.delete();
                }

            } catch (Exception ex) {
                edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
                edu.ku.brc.exceptions.ExceptionTracker.getInstance().capture(JasperReportsCache.class, ex);
                throw new RuntimeException(ex);
            }
        }
    }
}

---

From source file:net.sf.jclal.util.xml.XMLConfigurationBuilder.java

/**
 *
 * @param file The file path of the xml configuration.
 * @param replace If the file exists, replace with the new one.
 * @throws Exception The exception that will be launched
 *///  w  ww.j  a va 2s. co m
public XMLConfigurationBuilder(File file, boolean replace) throws Exception {
    this.file = file.getAbsoluteFile();

    FileUtil.createFile(file, replace);

    initBuilder();
}

---

From source file:com.github.kaklakariada.aws.sam.PluginTest.java

private void runBuild(File projectDir, String... arguments) {
    final List<String> argsList = new ArrayList<>();
    argsList.addAll(asList(arguments));//  w w w .j av  a  2  s  .c  om
    argsList.addAll(asList("-Pstage=" + STAGE, "--info", "--stacktrace", "--max-workers", "1"));
    argsList.addAll(getCustomProjectParameters());
    buildResult = GradleRunner.create().withProjectDir(projectDir.getAbsoluteFile()) //
            .withPluginClasspath() //
            .withArguments(argsList) //
            .forwardOutput() //
            .build();
}

---

From source file:architecture.ee.web.logo.DefaultLogoManager.java

protected File getThumbnailFromCacheIfExist(LogoImage image, int width, int height) throws IOException {
    try {/*w  ww.  ja  v  a  2  s  . co  m*/
        lock.lock();
        log.debug("thumbnail : " + width + " x " + height);
        File dir = getImageCacheDir();
        File file = new File(dir, toThumbnailFilename(image, width, height));
        File originalFile = getImageFromCacheIfExist(image);
        log.debug("orignal image source: " + originalFile.getAbsoluteFile() + ", " + originalFile.length()
                + " thumbnail:" + file.getAbsoluteFile() + " - " + file.exists());
        if (file.exists()) {
            log.debug(file.length());
            if (file.length() > 0) {
                image.setThumbnailSize((int) file.length());
                return file;
            } else {
            }
        }

        /**
         * TIP : ?  Thumbnail ? ???  ??   ?.
         */
        log.debug("create thumbnail : " + file.getAbsolutePath());
        if (Platform.current() == Platform.WINDOWS) {
            File tmp = getTemeFile();
            Thumbnails.of(originalFile).size(width, height).outputFormat("png")
                    .toOutputStream(new FileOutputStream(tmp));
            image.setThumbnailSize((int) tmp.length());
            FileUtils.copyFile(tmp, file);
        } else {
            try {
                Thumbnails.of(originalFile).allowOverwrite(true).size(width, height).outputFormat("png")
                        .toOutputStream(new FileOutputStream(file));
            } catch (Throwable e) {
                log.error(e);
            }
            image.setThumbnailSize((int) file.length());
        }

        return file;

    } finally {
        lock.unlock();
    }

}

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