List of usage examples for java.io BufferedReader ready
public boolean ready() throws IOException
From source file:org.intermine.install.swing.CreateDatabaseWorker.java
/** * Create a database using the Postgres <code>createdb</code> program. * /* w w w. ja v a 2 s.co m*/ * @param server The database server. * @param databaseName The database name. * @param userName The database user name. * @param password The user password. * @param encoding The encoding for the database. * * @throws IOException if there is a problem running <code>createdb</code>. * * @throws InterruptedException if the thread is interrupted while running * the <code>createdb</code>. * * @throws DatabaseCreationException if the process completes but failed * to create the database. */ protected void createDatabaseWithCreatedb(String server, String databaseName, String userName, String password, String encoding) throws IOException, InterruptedException, DatabaseCreationException { String[] commands = { "/usr/bin/createdb", "-h", server, "-E", encoding, "-O", userName, "-W", "-T", "template0", databaseName }; if (logger.isDebugEnabled()) { StringBuilder command = new StringBuilder(); for (int i = 0; i < commands.length; i++) { if (i > 0) { command.append(' '); } command.append(commands[i]); } logger.debug(command); } StringBuilder output = new StringBuilder(); StringBuilder errorOutput = new StringBuilder(); Integer exitCode = null; Process p = Runtime.getRuntime().exec(commands); try { BufferedReader stdin = new BufferedReader(new InputStreamReader(p.getInputStream())); BufferedReader stderr = new BufferedReader(new InputStreamReader(p.getErrorStream())); boolean passwordSet = false; while (true) { try { while (stdin.ready()) { char c = (char) stdin.read(); output.append(c); } while (stderr.ready()) { char c = (char) stderr.read(); errorOutput.append(c); } if (!passwordSet && errorOutput.indexOf("Password:") >= 0) { PrintStream out = new PrintStream(p.getOutputStream(), true); out.println(password); passwordSet = true; } exitCode = p.exitValue(); // If this succeeds, we're done. break; } catch (IllegalThreadStateException e) { // Process not done, so wait and continue. Thread.sleep(250); } } } finally { try { p.exitValue(); } catch (IllegalThreadStateException e) { // Not finished, but something has failed. p.destroy(); } } if (errorOutput.length() > 0) { throw new DatabaseCreationException(exitCode, output.toString(), errorOutput.toString()); } if (exitCode != 0) { throw new DatabaseCreationException("Return code from createdb = " + exitCode, exitCode, output.toString(), errorOutput.toString()); } }
From source file:com.gplus.api.GPlusEDCAsActivityTest.java
@Test public void Tests() throws Exception { InputStream is = GPlusEDCAsActivityTest.class.getResourceAsStream("/GPlusEDCFixed.json"); if (is == null) System.out.println("null"); InputStreamReader isr = new InputStreamReader(is); BufferedReader br = new BufferedReader(isr); xmlMapper.configure(DeserializationFeature.FAIL_ON_UNKNOWN_PROPERTIES, Boolean.FALSE); xmlMapper.configure(DeserializationFeature.ACCEPT_SINGLE_VALUE_AS_ARRAY, Boolean.TRUE); xmlMapper.configure(DeserializationFeature.ACCEPT_EMPTY_STRING_AS_NULL_OBJECT, Boolean.TRUE); jsonMapper.configure(DeserializationFeature.FAIL_ON_UNKNOWN_PROPERTIES, Boolean.FALSE); jsonMapper.configure(DeserializationFeature.ACCEPT_SINGLE_VALUE_AS_ARRAY, Boolean.TRUE); jsonMapper.configure(DeserializationFeature.ACCEPT_EMPTY_STRING_AS_NULL_OBJECT, Boolean.TRUE); try {/*w ww . j av a 2 s . c o m*/ while (br.ready()) { String line = br.readLine(); Activity activity = null; try { activity = gplusSerializer.deserialize(line); } catch (Exception e) { LOGGER.error(line); e.printStackTrace(); Assert.fail("Exception on gplus Serializer.deserialize(jsonString) : " + e); } try { String activityString = gplusSerializer.serialize(activity); LOGGER.debug(activityString); } catch (Exception e) { LOGGER.error(activity.toString()); e.printStackTrace(); Assert.fail("Exception on gplus Serializer.serialize(activity) : " + e); } } } catch (Exception e) { System.out.println("Exception: " + e); LOGGER.error(e.getMessage()); Assert.fail(""); } }
From source file:com.reddit.api.RedditEDCAsActivityJSONTest.java
@Test public void Tests() throws Exception { InputStream is = RedditEDCAsActivityJSONTest.class.getResourceAsStream("/RedditEDCFixed.json"); if (is == null) System.out.println("null"); InputStreamReader isr = new InputStreamReader(is); BufferedReader br = new BufferedReader(isr); xmlMapper.configure(DeserializationFeature.FAIL_ON_UNKNOWN_PROPERTIES, Boolean.FALSE); xmlMapper.configure(DeserializationFeature.ACCEPT_SINGLE_VALUE_AS_ARRAY, Boolean.TRUE); xmlMapper.configure(DeserializationFeature.ACCEPT_EMPTY_STRING_AS_NULL_OBJECT, Boolean.TRUE); jsonMapper.configure(DeserializationFeature.FAIL_ON_UNKNOWN_PROPERTIES, Boolean.FALSE); jsonMapper.configure(DeserializationFeature.ACCEPT_SINGLE_VALUE_AS_ARRAY, Boolean.TRUE); jsonMapper.configure(DeserializationFeature.ACCEPT_EMPTY_STRING_AS_NULL_OBJECT, Boolean.TRUE); try {//w ww. j a v a 2 s . c om while (br.ready()) { String line = br.readLine(); Activity activity = null; try { activity = redditSerializer.deserialize(line); } catch (Exception e) { LOGGER.error(line); e.printStackTrace(); Assert.fail("Exception on redditSerializer.deserialize(jsonString) : " + e); } try { String activityString = redditSerializer.serialize(activity); System.out.println(jsonMapper.writeValueAsString(activity)); } catch (Exception e) { LOGGER.error(activity.toString()); e.printStackTrace(); Assert.fail("Exception on redditSerializer.serialize(activity) : " + e); } //LOGGER.info(activity); } } catch (Exception e) { System.out.println("Exception: " + e); LOGGER.error(e.getMessage()); Assert.fail(""); } }
From source file:org.apache.streams.gnip.facebook.test.FacebookEDCAsActivityTest.java
@Ignore @Test//from www . ja va 2 s .c om public void Tests() throws Exception { InputStream is = FacebookEDCAsActivityTest.class.getResourceAsStream("/FacebookEDC.xml"); if (is == null) System.out.println("null"); InputStreamReader isr = new InputStreamReader(is); BufferedReader br = new BufferedReader(isr); xmlMapper.configure(DeserializationFeature.FAIL_ON_UNKNOWN_PROPERTIES, Boolean.FALSE); xmlMapper.configure(DeserializationFeature.ACCEPT_SINGLE_VALUE_AS_ARRAY, Boolean.TRUE); xmlMapper.configure(DeserializationFeature.ACCEPT_EMPTY_STRING_AS_NULL_OBJECT, Boolean.TRUE); jsonMapper.configure(DeserializationFeature.FAIL_ON_UNKNOWN_PROPERTIES, Boolean.FALSE); jsonMapper.configure(DeserializationFeature.ACCEPT_SINGLE_VALUE_AS_ARRAY, Boolean.TRUE); jsonMapper.configure(DeserializationFeature.ACCEPT_EMPTY_STRING_AS_NULL_OBJECT, Boolean.TRUE); try { while (br.ready()) { String line = br.readLine(); if (!StringUtils.isEmpty(line)) { LOGGER.debug(line); Object activityObject = xmlMapper.readValue(line, Object.class); String jsonString = jsonMapper.writeValueAsString(activityObject); JSONObject jsonObject = new JSONObject(jsonString); JSONObject fixedObject = GnipActivityFixer.fix(jsonObject); Activity activity = null; try { activity = jsonMapper.readValue(fixedObject.toString(), Activity.class); } catch (Exception e) { LOGGER.error(jsonObject.toString()); LOGGER.error(fixedObject.toString()); e.printStackTrace(); Assert.fail(); } //LOGGER.info(activity); } } } catch (Exception e) { LOGGER.error(e.getMessage()); Assert.fail(); } }
From source file:org.hyperic.hq.product.DetectionUtil.java
/** * This method finds all the childs of the provided process * @param parentPid// www . ja va2s .c o m */ public static Set<Long> getAllChildPid(long parentPid) { Set<Long> childPids = new HashSet<Long>(); if (IS_UNIX) { String cmd = "ps -o pid --no-headers --ppid " + String.valueOf(parentPid); String line; BufferedReader input = null; try { Process process = Runtime.getRuntime().exec(cmd); input = new BufferedReader(new InputStreamReader(process.getInputStream())); while ((line = input.readLine()) != null) { line = line.trim(); if (!line.equals("") && isNumber(line)) { Long childPid = Long.valueOf(line); childPids.addAll(getAllChildPid(childPid)); childPids.add(childPid); } } } catch (Exception e) { } finally { if (input != null) { try { input.close(); } catch (IOException e) { log.error(e); } } } } else if (IS_WINDOWS) { final String cmd = "wmic process get processid,parentprocessid"; String line; BufferedReader input = null; try { Process process = Runtime.getRuntime().exec(cmd); input = new BufferedReader(new InputStreamReader(process.getInputStream())); //[HQ-4176] - don't block this thread if (!input.ready()) { return childPids; } long lPpid = -1; String sPpid = ""; String sCpid = ""; long lCpid = -1; while ((line = input.readLine()) != null) { try { line = line.trim(); sPpid = line.substring(0, line.indexOf(" ")); lPpid = Long.valueOf(sPpid); if (parentPid == lPpid) { sCpid = line.substring(line.indexOf(" ")).trim(); lCpid = Long.valueOf(sCpid); childPids.addAll(getAllChildPid(lCpid)); childPids.add(lCpid); } else { continue; } } catch (Exception e) { continue; } } } catch (Exception e) { log.error(e); } finally { if (input != null) { try { input.close(); } catch (IOException e) { log.error(e); } } } } return childPids; }
From source file:org.springframework.sync.diffsync.DiffSyncTest.java
private String resource(String name) throws IOException { ClassPathResource resource = new ClassPathResource("/org/springframework/sync/" + name + ".json"); BufferedReader reader = new BufferedReader(new InputStreamReader(resource.getInputStream())); StringBuilder builder = new StringBuilder(); while (reader.ready()) { builder.append(reader.readLine()); }/*from w w w .ja v a2s .c o m*/ return builder.toString(); }
From source file:org.wso2.carbon.identity.authenticator.krb5.Krb5Authenticator.java
private boolean loginWithKrb5(String username, String password, String remoteAddress) throws AuthenticationException { //Proceed with Kerberos TGT request String uuid = UUID.randomUUID().toString(); ProcessBuilder procBldr = new ProcessBuilder("/usr/bin/kinit", "-l", "10d", "-r", "5d", "-c", tgtCachePrefix + uuid, username); procBldr.directory(new File(CARBON_HOME)); Map<String, String> env = procBldr.environment(); if (KRB5_CONFIG == null) KRB5_CONFIG = "/etc/krb5.conf"; env.put("KRB5_CONFIG", KRB5_CONFIG); log.info(env.get("KRB5_CONFIG")); HttpSession session = getHttpSession(); try {//from w w w . j ava 2 s. c om Process proc = procBldr.start(); InputStream procErr = proc.getErrorStream(); InputStream procOut = proc.getInputStream(); //Read the output from the program byte[] buffer = new byte[256]; BufferedWriter out = new BufferedWriter(new OutputStreamWriter(proc.getOutputStream())); BufferedReader err = new BufferedReader(new InputStreamReader(procErr)); boolean isError = (procErr.available() > 0) ? true : false; if (!isError) { out.write(password); out.newLine(); out.close(); if (proc.waitFor() != 0) { log.warn("Kinit Failed"); if (procErr.available() > 0) { String line = null; String msg = ""; while (err.ready() && (line = err.readLine()) != null) msg += line; if (!msg.equals("")) throw new AuthenticationException(msg); } } //Looks like all went well and we got the TGT, lets renew the TGT... procBldr = new ProcessBuilder("/usr/bin/kinit", "-R", "-c", tgtCachePrefix + uuid); proc = procBldr.start(); if (proc.waitFor() != 0) { log.warn("TGT Renewal Failed"); File tgt = new File(tgtCachePrefix + uuid); tgt.delete(); throw new AuthenticationException("TGT Renewal Failed"); } AuthenticationAdmin authAdmin = new AuthenticationAdmin(); boolean loggedIn = authAdmin.login(username, password, remoteAddress); if (loggedIn) { nameToUuidMap.put(username, uuid); session.setAttribute(Krb5AuthenticatorConstants.USER_TICKET_CACHE, tgtCachePrefix + uuid); } return loggedIn; } else { log.error("Incorrect kinit command: " + err.readLine()); throw new AuthenticationException("Incorrect kinit command"); } } catch (IOException ioe) { log.warn(ioe.getMessage()); ioe.printStackTrace(); throw new AuthenticationException(ioe.getMessage()); } catch (InterruptedException e) { e.printStackTrace(); throw new AuthenticationException(e.getMessage()); } }
From source file:eu.stratosphere.pact.runtime.task.DataSinkTaskTest.java
@Test @SuppressWarnings("unchecked") public void testSortingDataSinkTask() { int keyCnt = 100; int valCnt = 20; super.initEnvironment(MEMORY_MANAGER_SIZE * 4, NETWORK_BUFFER_SIZE); super.addInput(new UniformRecordGenerator(keyCnt, valCnt, true), 0); DataSinkTask<Record> testTask = new DataSinkTask<Record>(); // set sorting super.getTaskConfig().setInputLocalStrategy(0, LocalStrategy.SORT); super.getTaskConfig().setInputComparator(new RecordComparatorFactory(new int[] { 1 }, ((Class<? extends Key<?>>[]) new Class[] { IntValue.class })), 0); super.getTaskConfig().setMemoryInput(0, 4 * 1024 * 1024); super.getTaskConfig().setFilehandlesInput(0, 8); super.getTaskConfig().setSpillingThresholdInput(0, 0.8f); super.registerFileOutputTask(testTask, MockOutputFormat.class, new File(tempTestPath).toURI().toString()); try {//from ww w . j av a2s . c o m testTask.invoke(); } catch (Exception e) { LOG.debug(e); Assert.fail("Invoke method caused exception."); } File tempTestFile = new File(this.tempTestPath); Assert.assertTrue("Temp output file does not exist", tempTestFile.exists()); FileReader fr = null; BufferedReader br = null; try { fr = new FileReader(tempTestFile); br = new BufferedReader(fr); Set<Integer> keys = new HashSet<Integer>(); int curVal = -1; while (br.ready()) { String line = br.readLine(); Integer key = Integer.parseInt(line.substring(0, line.indexOf("_"))); Integer val = Integer.parseInt(line.substring(line.indexOf("_") + 1, line.length())); // check that values are in correct order Assert.assertTrue("Values not in ascending order", val >= curVal); // next value hit if (val > curVal) { if (curVal != -1) { // check that we saw 100 distinct keys for this values Assert.assertTrue("Keys missing for value", keys.size() == 100); } // empty keys set keys.clear(); // update current value curVal = val; } Assert.assertTrue("Duplicate key for value", keys.add(key)); } } catch (FileNotFoundException e) { Assert.fail("Out file got lost..."); } catch (IOException ioe) { Assert.fail("Caught IOE while reading out file"); } finally { if (br != null) { try { br.close(); } catch (Throwable t) { } } if (fr != null) { try { fr.close(); } catch (Throwable t) { } } } }
From source file:net.itransformers.topologyviewer.fulfilmentfactory.impl.TelnetCLIInterface.java
public String readUntil(String regexp) throws IOException { BufferedReader reader = new BufferedReader(new InputStreamReader(in)); logger.info("looking for : " + regexp); int chInt;//from ww w. j a va 2s . c o m StringBuffer sb = new StringBuffer(); while ((chInt = reader.read()) != -1) { char ch = (char) chInt; if (ch == '\n') { logger.info(sb.toString()); sb.setLength(0); continue; } sb.append(ch); String st = sb.toString(); if (st.matches(regexp)) { logger.info("### Found match: " + sb); return st; } if (!reader.ready()) { logger.info("Buffer is not ready. Read characters until now: " + sb.toString()); } } return null; }
From source file:com.aerospike.load.AerospikeLoad.java
/** * Process a single file// ww w. j a v a 2 s .co m */ private void processFile() { int lineNumber = 0; log.trace("Hosts: " + this.client.getNodeNames()); long start = System.currentTimeMillis(); try { BufferedReader br = new BufferedReader( new InputStreamReader(new FileInputStream(this.fileName), "UTF8")); log.debug("Reading file: " + Utils.getFileName(fileName)); while (br.ready()) { String line; //skip reading 1st line of data file if (params.ignoreFirstLine) { lineNumber++; String metaColumn = br.readLine(); counters.write.recordTotal = counters.write.recordTotal - metaColumn.length(); } AsWriterTask task = null; while ((line = br.readLine()) != null) { lineNumber++; log.trace("Read line " + lineNumber + " from file " + Utils.getFileName(fileName)); // Throttle the read to write ratio while ((counters.write.readCount.get() - (counters.write.writeCount.get() + counters.write.writeErrors.get())) > rwThrottle) { Thread.sleep(20); } if (params.fileType.equalsIgnoreCase(Constants.CSV_FILE)) { //add 2 to handle different file size in different platform. task = new AsWriterTask(fileName, lineNumber, (line.length() + 1), Parser.getCSVRawColumns(line, params.delimiter), metadataColumnDefs, binColumnDefs, this.client, params, counters); counters.write.readerProcessed.incrementAndGet(); } else { log.error("File format not supported"); } log.trace("Submitting line " + lineNumber + " in file " + Utils.getFileName(fileName)); writerPool.submit(task); counters.write.readCount.incrementAndGet(); } } br.close(); } catch (IOException e) { counters.write.readErrors.incrementAndGet(); log.error("Error processing file: " + Utils.getFileName(fileName) + ": Line: " + lineNumber); if (log.isDebugEnabled()) { e.printStackTrace(); } } catch (Exception e) { counters.write.readErrors.incrementAndGet(); log.error("Error processing file: " + Utils.getFileName(fileName) + ": Line: " + lineNumber); if (log.isDebugEnabled()) { e.printStackTrace(); } } long stop = System.currentTimeMillis(); log.info(String.format("Reader completed %d-lines in %.3fsec, From file: %s", lineNumber, (float) (stop - start) / 1000, Utils.getFileName(fileName))); }