Example usage for com.mongodb BasicDBObject getInt

Introduction

In this page you can find the example usage for com.mongodb BasicDBObject getInt.

Prototype

public int getInt(final String key)

Source Link

Document

Returns the value of a field as an int .

Usage

From source file:tango.mongo.MongoConnector.java

License:Open Source License

public synchronized HashMap<Integer, BasicDBObject> getObjects(ObjectId nucleusId, int channelIdx) {
    BasicDBObject query = new BasicDBObject("nucleus_id", nucleusId).append("channelIdx", channelIdx);
    DBCursor cursor = object3D.find(query);
    HashMap<Integer, BasicDBObject> res = new HashMap<Integer, BasicDBObject>(cursor.size());
    while (cursor.hasNext()) {
        BasicDBObject nuc = (BasicDBObject) cursor.next();
        res.put(nuc.getInt("idx"), nuc);
    }/*from w  ww  .  j  a  va  2 s  . c o  m*/
    cursor.close();
    return res;
}

From source file:tango.mongo.MongoConnector.java

License:Open Source License

public synchronized ImageHandler getInputImage(ObjectId field_id, int idx) {
    BasicDBObject query = new BasicDBObject("field_id", field_id).append("fileRank", idx);
    GridFSDBFile f = this.gfsField.findOne(query);
    if (f != null) {
        ImageHandler res = createImage(f);
        if (res != null) {
            return res;
        }/*ww  w .j a v a2  s  .co  m*/
    }
    // open from directory
    BasicDBObject field = this.getField(field_id);
    String error = "could'nt open file:" + idx + " from field:" + field.getString("name")
            + " please relink files by launching the command \"import files\"";
    if (field.containsField("files")) {
        BasicDBList files = (BasicDBList) field.get("files");
        if (files.size() > 1) { // separated files
            if (idx >= files.size()) {
                IJ.log(error);
            } else {
                BasicDBObject fileObj = (BasicDBObject) files.get(idx);
                File file = new File(fileObj.getString("path"));
                if (file.exists()) {
                    return ImageOpener.OpenChannel(file, 0, 0, 0);
                }

            }
        } else {
            BasicDBObject fileObj = (BasicDBObject) files.get(0);
            File file = new File(fileObj.getString("path"));
            if (file.exists()) {
                return ImageOpener.OpenChannel(file, idx, fileObj.getInt("series"),
                        fileObj.getInt("timePoint"));
            }
        }
    } else {
        IJ.log(error);
    }

    return null;
}

From source file:tango.mongo.MongoConnector.java

License:Open Source License

public synchronized byte[] createInputImageThumbnail(ObjectId field_id, int idx) {
    BasicDBObject query = new BasicDBObject("field_id", field_id).append("fileRank", idx);
    GridFSDBFile f = this.gfsField.findOne(query);
    if (f != null) {
        ImageHandler res = createImage(f);
        if (res != null) {
            return res.getThumbNail(Field.tmbSize, Field.tmbSize);
        }//from   ww w.j  a  v  a 2 s  .  c  o m
    }
    // open from directory
    BasicDBObject field = this.getField(field_id);
    String error = "could'nt open file:" + idx + " from field:" + field.getString("name")
            + " please relink files by launching the command \"import files\"";
    if (field.containsField("files")) {
        BasicDBList files = (BasicDBList) field.get("files");
        if (files.size() > 1) { // separated files
            if (idx >= files.size()) {
                IJ.log(error);
            } else {
                BasicDBObject fileObj = (BasicDBObject) files.get(idx);
                File file = new File(fileObj.getString("path"));
                if (file.exists()) {
                    return ImageOpener.openThumbnail(file, 0, 0, 0, Field.tmbSize, Field.tmbSize);
                }

            }
        } else {
            BasicDBObject fileObj = (BasicDBObject) files.get(0);
            File file = new File(fileObj.getString("path"));
            if (file.exists()) {
                return ImageOpener.openThumbnail(file, idx, fileObj.getInt("series"),
                        fileObj.getInt("timePoint"), Field.tmbSize, Field.tmbSize);
            }
        }
    } else {
        IJ.log(error);
    }
    return null;
}

From source file:tango.parameter.IntParameter.java

License:Open Source License

@Override
public void dbGet(BasicDBObject DBO) {
    if (DBO.containsField(id) && DBO.get(id) != null) {
        number.setValue(DBO.getInt(id));
    }/*ww w .  j  ava 2  s  .  c om*/
    setColor();
}

From source file:tango.parameter.SliderParameter.java

License:Open Source License

@Override
public void dbGet(BasicDBObject DBO) {
    if (DBO.containsField(id) && DBO.get(id) != null) {
        int value = DBO.getInt(id);
        if (value < this.min) {
            slider.setValue(min);/*www.ja va  2s .com*/
        } else if (value > this.max) {
            slider.setValue(max);
        } else {
            slider.setValue(value);
        }
    }
    setColor();
}

From source file:tango.parameter.SpinnerParameter.java

License:Open Source License

@Override
public void dbGet(BasicDBObject DBO) {
    if (DBO.containsField(id)) {
        model.setValue(new Integer(DBO.getInt(id)));
    }//  w  ww .  j a va  2 s . c om
    setColor();
}

From source file:tango.parameter.StructureParameter.java

License:Open Source License

@Override
public void dbGet(BasicDBObject DBO) {
    if (DBO.containsField(id)) {
        int idx = DBO.getInt(id) + 1;
        if (choice.getItemCount() > idx) {
            choice.setSelectedIndex(idx);
        }// w  ww . j  av  a  2s. com
    }
    setColor();
}