Example usage for com.lowagie.text Table setCellsFitPage

List of usage examples for com.lowagie.text Table setCellsFitPage

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Introduction

In this page you can find the example usage for com.lowagie.text Table setCellsFitPage.

Prototype

public void setCellsFitPage(boolean fitPage)

Source Link

Document

Allows you to control when a page break occurs.

Usage

From source file:ispyb.client.mx.collection.PdfRtfExporter.java

License:Open Source License

/**
 * set the strategy table and wedge & subwedge strategy tables
 * //  w w  w. j av  a 2  s .  co  m
 * @param document
 * @param dcInfo
 * @throws Exception
 */
private void setStrategyTable(Document document, DataCollectionInformation dcInfo) throws Exception {
    // ------------------------------------------- Strategy Wedge
    // ------------------------------------------------
    List<StrategyWedgeInformation> strategyWedgeInformationList = dcInfo.getListStrategyWedgeInformation();
    for (Iterator<StrategyWedgeInformation> i = strategyWedgeInformationList.iterator(); i.hasNext();) {
        document.add(new Paragraph(" ", VERY_SMALL_FONT));
        StrategyWedgeInformation swi = i.next();
        Table strategyWedgeTable = new Table(10);
        int headerStrategyWedge[] = { 8, 10, 10, 10, 10, 10, 10, 10, 10, 20 }; // percentage
        strategyWedgeTable.setWidths(headerStrategyWedge);
        strategyWedgeTable.setWidth(100);
        strategyWedgeTable.setCellsFitPage(true);
        strategyWedgeTable.setTableFitsPage(true);
        strategyWedgeTable.setPadding(0);
        strategyWedgeTable.getDefaultCell().setBorderWidth(0);
        strategyWedgeTable.setBorderWidth(0);
        strategyWedgeTable.getDefaultCell().setBackgroundColor(WEDGE_COLOR);

        strategyWedgeTable.addCell(new Paragraph("Wedge number", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Resolution\n(" + Constants.ANGSTROM + ")", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Completeness", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Multiplicity", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Total dose", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Number of Images", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Phi\n(" + Constants.DEGREE + ")", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Kappa\n(" + Constants.DEGREE + ")", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Wavelength", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Comments", FONT_DOC_BOLD));

        strategyWedgeTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
        // rows
        strategyWedgeTable.addCell(new Paragraph(swi.getWedgeNumber(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getResolution(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getCompleteness(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getMultiplicity(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getDoseTotal(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getNumberOfImages(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getPhi(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getKappa(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getWavelength(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getComments(), FONT_DOC));

        document.add(strategyWedgeTable);

        // --- strategy sub wedge
        if (swi.getListStrategySubWedgeInformation().size() > 0) {
            document.add(new Paragraph(" ", VERY_SMALL_FONT));

            Table strategySubWedgeTable = new Table(12);
            int headerStrategySubWedge[] = { 8, 15, 10, 10, 10, 10, 10, 10, 10, 8, 8, 20 }; // percentage
            strategySubWedgeTable.setWidths(headerStrategySubWedge);
            strategySubWedgeTable.setWidth(80);
            strategySubWedgeTable.setCellsFitPage(true);
            strategySubWedgeTable.setTableFitsPage(true);
            strategySubWedgeTable.setPadding(0);
            strategySubWedgeTable.getDefaultCell().setBorderWidth(0);
            strategySubWedgeTable.setBorderWidth(0);
            strategySubWedgeTable.getDefaultCell().setBackgroundColor(SUBWEDGE_COLOR);

            strategySubWedgeTable.addCell(new Paragraph("Sub Wedge number", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Rotation axis", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Axis start", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Axis end", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Exposure time", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Transmission", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Oscillation Range", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Completeness", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Multiplicity", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Total dose", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Number of images", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Comments", FONT_DOC_BOLD));

            strategySubWedgeTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
            // rows
            for (Iterator<StrategySubWedgeInformation> s = swi.getListStrategySubWedgeInformation()
                    .iterator(); s.hasNext();) {
                StrategySubWedgeInformation sswi = s.next();
                strategySubWedgeTable.addCell(new Paragraph(sswi.getSubWedgeNumber(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getRotationAxis(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getAxisStart(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getAxisEnd(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getExposureTime(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getTransmission(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getOscillationRange(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getCompleteness(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getMultiplicity(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getDoseTotal(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getNumberOfImages(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getComments(), FONT_DOC));
            }
            document.add(strategySubWedgeTable);
        }
    }
    document.add(new Paragraph(" ", VERY_SMALL_FONT));
}

From source file:ispyb.client.mx.collection.PdfRtfExporter.java

License:Open Source License

/**
 * set the strategy table and wedge & subwedge strategy tables copy from
 * setStrategyTable, waiting for feedback that we can remove the old reports
 * and the first method/*from www .  j a  va  2s.c om*/
 * 
 * @param document
 * @param dcInfo
 * @throws Exception
 */
private void setStrategyTable2(Document document, DataCollectionInformation dcInfo) throws Exception {
    // ------------------------------------------- Strategy Wedge
    // ------------------------------------------------
    List<StrategyWedgeInformation> strategyWedgeInformationList = dcInfo.getListStrategyWedgeInformation();
    for (Iterator<StrategyWedgeInformation> i = strategyWedgeInformationList.iterator(); i.hasNext();) {
        document.add(new Paragraph(" ", VERY_SMALL_FONT));
        StrategyWedgeInformation swi = i.next();
        Table strategyWedgeTable = new Table(10);
        int headerStrategyWedge[] = { 8, 10, 10, 10, 10, 10, 10, 10, 10, 20 }; // percentage
        strategyWedgeTable.setWidths(headerStrategyWedge);
        strategyWedgeTable.setWidth(100);
        strategyWedgeTable.setCellsFitPage(true);
        strategyWedgeTable.setTableFitsPage(true);
        strategyWedgeTable.setPadding(1);
        strategyWedgeTable.getDefaultCell().setBorderWidth(1);
        strategyWedgeTable.setBorderWidth(1);
        strategyWedgeTable.getDefaultCell().setBackgroundColor(LIGHT_GREY_COLOR);
        strategyWedgeTable.getDefaultCell().setHorizontalAlignment(Element.ALIGN_CENTER);

        strategyWedgeTable.addCell(new Paragraph("Wedge number", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Resolution (" + Constants.ANGSTROM + ")", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Completeness", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Multiplicity", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Total dose", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Number of Images", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Phi (" + Constants.DEGREE + ")", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Kappa (" + Constants.DEGREE + ")", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Wavelength", FONT_DOC_BOLD));
        strategyWedgeTable.addCell(new Paragraph("Comments", FONT_DOC_BOLD));

        strategyWedgeTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
        // rows
        strategyWedgeTable.addCell(new Paragraph(swi.getWedgeNumber(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getResolution(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getCompleteness(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getMultiplicity(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getDoseTotal(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getNumberOfImages(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getPhi(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getKappa(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getWavelength(), FONT_DOC));
        strategyWedgeTable.addCell(new Paragraph(swi.getComments(), FONT_DOC));

        document.add(strategyWedgeTable);

        // --- strategy sub wedge
        if (swi.getListStrategySubWedgeInformation().size() > 0) {
            document.add(new Paragraph(" ", VERY_SMALL_FONT));

            Table strategySubWedgeTable = new Table(12);
            int headerStrategySubWedge[] = { 8, 15, 10, 10, 10, 10, 10, 10, 10, 8, 8, 20 }; // percentage
            strategySubWedgeTable.setWidths(headerStrategySubWedge);
            strategySubWedgeTable.setWidth(97);
            strategySubWedgeTable.setCellsFitPage(true);
            strategySubWedgeTable.setTableFitsPage(true);
            strategySubWedgeTable.setPadding(1);
            strategySubWedgeTable.getDefaultCell().setBorderWidth(1);
            strategySubWedgeTable.setBorderWidth(1);
            strategySubWedgeTable.getDefaultCell().setBackgroundColor(LIGHT_GREY_COLOR);
            strategySubWedgeTable.getDefaultCell().setHorizontalAlignment(Element.ALIGN_CENTER);

            strategySubWedgeTable.addCell(new Paragraph("Sub Wedge number", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Rotation axis", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Axis start", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Axis end", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Exposure time", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Transmission", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Oscillation Range", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Completeness", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Multiplicity", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Total dose", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Number of images", FONT_DOC_BOLD));
            strategySubWedgeTable.addCell(new Paragraph("Comments", FONT_DOC_BOLD));

            strategySubWedgeTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
            // rows
            for (Iterator<StrategySubWedgeInformation> s = swi.getListStrategySubWedgeInformation()
                    .iterator(); s.hasNext();) {
                StrategySubWedgeInformation sswi = s.next();
                strategySubWedgeTable.addCell(new Paragraph(sswi.getSubWedgeNumber(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getRotationAxis(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getAxisStart(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getAxisEnd(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getExposureTime(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getTransmission(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getOscillationRange(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getCompleteness(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getMultiplicity(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getDoseTotal(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getNumberOfImages(), FONT_DOC));
                strategySubWedgeTable.addCell(new Paragraph(sswi.getComments(), FONT_DOC));
            }
            document.add(strategySubWedgeTable);
        }
    }
    document.add(new Paragraph(" ", VERY_SMALL_FONT));
}

From source file:ispyb.client.mx.collection.PdfRtfExporter.java

License:Open Source License

private void setRankingTable(Document document, DataCollectionInformation dcInfo) throws Exception {
    SampleRankingVO rankingVO = dcInfo.getSampleRankingVO();
    if (rankingVO == null) {
        return;/*from   ww w  .  j  a  v  a2  s  . c  o m*/
    }
    DecimalFormat decimalFormat1 = (DecimalFormat) NumberFormat.getInstance(Locale.US);
    decimalFormat1.applyPattern("0");
    DecimalFormat decimalFormat2 = (DecimalFormat) NumberFormat.getInstance(Locale.US);
    decimalFormat2.applyPattern("0.00");
    Table aTable = new Table(6);
    // aTable.setWidth(100); // percentage
    aTable.setPadding(3);
    aTable.setCellsFitPage(true);
    aTable.getDefaultCell().setBorderWidth(1);
    aTable.setBorderWidth(1);
    aTable.getDefaultCell().setHorizontalAlignment(Element.ALIGN_CENTER);
    // header
    aTable.getDefaultCell().setGrayFill(GREY_FILL_HEADER);
    aTable.addCell(new Paragraph("Ranking Resolution\n(" + Constants.ANGSTROM + ")", FONT_DOC_BOLD));
    aTable.addCell(new Paragraph("Exposure Time\n(s)", FONT_DOC_BOLD));
    aTable.addCell(new Paragraph("Mosaicity\n(" + Constants.DEGREE + ")", FONT_DOC_BOLD));
    aTable.addCell(new Paragraph("Number of spots", FONT_DOC_BOLD));
    aTable.addCell(new Paragraph("Number of images", FONT_DOC_BOLD));
    aTable.addCell(new Paragraph("Total", FONT_DOC_BOLD));
    aTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
    // row
    String rankRes = "#" + decimalFormat1.format(rankingVO.getTheoreticalResolutionRank());
    if (rankingVO.getTheoreticalResolutionValue() != null
            && !Double.isNaN(rankingVO.getTheoreticalResolutionValue())) {
        rankRes += "   " + decimalFormat2.format(rankingVO.getTheoreticalResolutionValue());
    }
    String rankExp = "#" + decimalFormat1.format(rankingVO.getTotalExposureTimeRank());
    if (rankingVO.getTotalExposureTimeValue() != null && !Double.isNaN(rankingVO.getTotalExposureTimeValue())) {
        rankExp += "   " + decimalFormat2.format(rankingVO.getTotalExposureTimeValue());
    }
    String rankMos = "#" + decimalFormat1.format(rankingVO.getMosaicityRank());
    if (rankingVO.getMosaicityValue() != null && !Double.isNaN(rankingVO.getMosaicityValue())) {
        rankMos += "   " + decimalFormat2.format(rankingVO.getMosaicityValue());
    }
    String rankSpot = "#" + decimalFormat1.format(rankingVO.getNumberOfSpotsIndexedRank());
    if (rankingVO.getNumberOfSpotsIndexedValue() != null
            && !Double.isNaN(rankingVO.getNumberOfSpotsIndexedValue())) {
        rankSpot += "   " + decimalFormat1.format(rankingVO.getNumberOfSpotsIndexedValue());
    }
    String rankImages = "#" + decimalFormat1.format(rankingVO.getNumberOfImagesRank());
    if (rankingVO.getNumberOfImagesValue() != null && !Double.isNaN(rankingVO.getNumberOfImagesValue())) {
        rankImages += "   " + decimalFormat1.format(rankingVO.getNumberOfImagesValue());
    }
    String rankTotal = "#" + decimalFormat1.format(rankingVO.getTotalRank());
    if (rankingVO.getTotalScore() != null && !Double.isNaN(rankingVO.getTotalScore())) {
        rankTotal += "   " + decimalFormat1.format(rankingVO.getTotalScore()) + " %";
    }
    // ... rank res
    if (rankingVO.getTheoreticalResolutionRank() == 1) {
        aTable.getDefaultCell().setBackgroundColor(GREEN_COLOR_RANK);
    } else if (rankingVO.getTheoreticalResolutionValue() == null
            || Double.isNaN(rankingVO.getTheoreticalResolutionValue())) {
        aTable.getDefaultCell().setBackgroundColor(NULL_COLOR_RANK);
    } else {
        aTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
    }
    aTable.addCell(new Paragraph(rankRes, FONT_DOC));
    // ... exp. time
    if (rankingVO.getTotalExposureTimeRank() == 1) {
        aTable.getDefaultCell().setBackgroundColor(GREEN_COLOR_RANK);
    } else if (rankingVO.getTotalExposureTimeValue() == null
            || Double.isNaN(rankingVO.getTotalExposureTimeValue())) {
        aTable.getDefaultCell().setBackgroundColor(NULL_COLOR_RANK);
    } else {
        aTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
    }
    aTable.addCell(new Paragraph(rankExp, FONT_DOC));
    // ... mosaicity
    if (rankingVO.getMosaicityRank() == 1) {
        aTable.getDefaultCell().setBackgroundColor(GREEN_COLOR_RANK);
    } else if (rankingVO.getMosaicityValue() == null || Double.isNaN(rankingVO.getMosaicityValue())) {
        aTable.getDefaultCell().setBackgroundColor(NULL_COLOR_RANK);
    } else {
        aTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
    }
    aTable.addCell(new Paragraph(rankMos, FONT_DOC));
    // ... number of spots
    if (rankingVO.getNumberOfSpotsIndexedRank() == 1) {
        aTable.getDefaultCell().setBackgroundColor(GREEN_COLOR_RANK);
    } else if (rankingVO.getNumberOfSpotsIndexedValue() == null
            || Double.isNaN(rankingVO.getNumberOfSpotsIndexedValue())) {
        aTable.getDefaultCell().setBackgroundColor(NULL_COLOR_RANK);
    } else {
        aTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
    }
    aTable.addCell(new Paragraph(rankSpot, FONT_DOC));
    // ... number of images
    if (rankingVO.getNumberOfImagesRank() == 1) {
        aTable.getDefaultCell().setBackgroundColor(GREEN_COLOR_RANK);
    } else if (rankingVO.getNumberOfImagesValue() == null || Double.isNaN(rankingVO.getNumberOfImagesValue())) {
        aTable.getDefaultCell().setBackgroundColor(NULL_COLOR_RANK);
    } else {
        aTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
    }
    aTable.addCell(new Paragraph(rankImages, FONT_DOC));
    // ... total
    if (rankingVO.getTotalRank() == 1) {
        aTable.getDefaultCell().setBackgroundColor(GREEN_COLOR_RANK);
    } else if (rankingVO.getTotalScore() == null || Double.isNaN(rankingVO.getTotalScore())) {
        aTable.getDefaultCell().setBackgroundColor(NULL_COLOR_RANK);
    } else {
        aTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
    }
    aTable.addCell(new Paragraph(rankTotal, FONT_DOC));
    //
    document.add(aTable);
    document.add(new Paragraph(" ", VERY_SMALL_FONT));
}

From source file:ispyb.client.mx.collection.PdfRtfExporter.java

License:Open Source License

private void setAutoProcRankingTable(Document document, DataCollectionInformation dcInfo) throws Exception {
    AutoProcRankingVO rankingVO = dcInfo.getAutoProcRankingVO();
    if (rankingVO == null) {
        return;//w w w. j  a v  a2s  .  co m
    }
    DecimalFormat decimalFormat1 = (DecimalFormat) NumberFormat.getInstance(Locale.US);
    decimalFormat1.applyPattern("0");
    DecimalFormat decimalFormat2 = (DecimalFormat) NumberFormat.getInstance(Locale.US);
    decimalFormat2.applyPattern("0.00");
    Table aTable = new Table(4);
    // aTable.setWidth(100); // percentage
    aTable.setPadding(3);
    aTable.setCellsFitPage(true);
    aTable.getDefaultCell().setBorderWidth(1);
    aTable.setBorderWidth(1);
    aTable.getDefaultCell().setHorizontalAlignment(Element.ALIGN_CENTER);
    // header
    aTable.getDefaultCell().setGrayFill(GREY_FILL_HEADER);
    aTable.addCell(new Paragraph("R-factor\n(" + Constants.ANGSTROM + ")", FONT_DOC_BOLD));
    aTable.addCell(new Paragraph("Highest resolution\n(" + Constants.ANGSTROM + ")", FONT_DOC_BOLD));
    aTable.addCell(new Paragraph("Completeness\n(%)", FONT_DOC_BOLD));
    aTable.addCell(new Paragraph("Total", FONT_DOC_BOLD));
    aTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
    // row
    String rankRfactor = "#" + decimalFormat1.format(rankingVO.getOverallRFactorRank());
    if (rankingVO.getOverallRFactorValue() != null && !Double.isNaN(rankingVO.getOverallRFactorValue())) {
        rankRfactor += "   " + decimalFormat2.format(rankingVO.getOverallRFactorValue());
    }
    String rankHighestRes = "#" + decimalFormat1.format(rankingVO.getHighestResolutionRank());
    if (rankingVO.getHighestResolutionValue() != null && !Double.isNaN(rankingVO.getHighestResolutionValue())) {
        rankHighestRes += "   " + decimalFormat2.format(rankingVO.getHighestResolutionValue());
    }
    String rankCom = "#" + decimalFormat1.format(rankingVO.getCompletenessRank());
    if (rankingVO.getCompletenessValue() != null && !Double.isNaN(rankingVO.getCompletenessValue())) {
        rankCom += "   " + decimalFormat2.format(rankingVO.getCompletenessValue());
    }
    String rankTotal = "#" + decimalFormat1.format(rankingVO.getTotalRank());
    if (rankingVO.getTotalScore() != null && !Double.isNaN(rankingVO.getTotalScore())) {
        rankTotal += "   " + decimalFormat1.format(rankingVO.getTotalScore()) + " %";
    }
    // ... R-factor
    if (rankingVO.getOverallRFactorRank() == 1) {
        aTable.getDefaultCell().setBackgroundColor(GREEN_COLOR_RANK);
    } else if (rankingVO.getOverallRFactorValue() == null || Double.isNaN(rankingVO.getOverallRFactorValue())) {
        aTable.getDefaultCell().setBackgroundColor(NULL_COLOR_RANK);
    } else {
        aTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
    }
    aTable.addCell(new Paragraph(rankRfactor, FONT_DOC));
    // ... highest resolution
    if (rankingVO.getHighestResolutionRank() == 1) {
        aTable.getDefaultCell().setBackgroundColor(GREEN_COLOR_RANK);
    } else if (rankingVO.getHighestResolutionValue() == null
            || Double.isNaN(rankingVO.getHighestResolutionValue())) {
        aTable.getDefaultCell().setBackgroundColor(NULL_COLOR_RANK);
    } else {
        aTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
    }
    aTable.addCell(new Paragraph(rankHighestRes, FONT_DOC));
    // ... completeness
    if (rankingVO.getCompletenessRank() == 1) {
        aTable.getDefaultCell().setBackgroundColor(GREEN_COLOR_RANK);
    } else if (rankingVO.getCompletenessValue() == null || Double.isNaN(rankingVO.getCompletenessValue())) {
        aTable.getDefaultCell().setBackgroundColor(NULL_COLOR_RANK);
    } else {
        aTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
    }
    aTable.addCell(new Paragraph(rankCom, FONT_DOC));
    // ... total
    if (rankingVO.getTotalRank() == 1) {
        aTable.getDefaultCell().setBackgroundColor(GREEN_COLOR_RANK);
    } else if (rankingVO.getTotalScore() == null || Double.isNaN(rankingVO.getTotalScore())) {
        aTable.getDefaultCell().setBackgroundColor(NULL_COLOR_RANK);
    } else {
        aTable.getDefaultCell().setBackgroundColor(WHITE_COLOR);
    }
    aTable.addCell(new Paragraph(rankTotal, FONT_DOC));
    //
    document.add(aTable);
    document.add(new Paragraph(" ", VERY_SMALL_FONT));
}

From source file:ispyb.client.mx.collection.PdfRtfExporter.java

License:Open Source License

/**
 * set the table for a given MXPressO/*from   w w w  .j av  a  2  s .  c  om*/
 * 
 * @param document
 * @param dataCollectionGroupVO
 * @param mRequest
 * @param lastCollectOSC
 * @param nextToLastCollectChar
 * @throws Exception
 */
private void setMXPressOTable(Document document, DataCollectionGroup3VO dataCollectionGroupVO,
        HttpServletRequest mRequest, DataCollection3VO lastCollectOSC, DataCollection3VO nextToLastCollectChar)
        throws Exception {
    if (dataCollectionGroupVO != null) {

        DataCollectionExporter dcExporter = new DataCollectionExporter(df2, df3, proposalCode, proposalNumber,
                mRequest);
        if (lastCollectOSC != null) {

            DataCollectionInformation dcInfo = dcExporter.getDataCollectionInformation(lastCollectOSC,
                    getSampleRankingVO(lastCollectOSC.getDataCollectionId()),
                    getAutoProcRankingVO(lastCollectOSC.getDataCollectionId()));

            int noCol = 3;
            Table tableWF = new Table(noCol);
            int[] headersWidthWF = new int[noCol];
            int l = 0;

            headersWidthWF[l++] = 27; // snapshot
            headersWidthWF[l++] = 24; // map 1
            headersWidthWF[l++] = 51; // map2
            // tableWF.setWidths(headersWidthWF);

            tableWF.setWidth(100); // percentage
            tableWF.setPadding(1);
            tableWF.setCellsFitPage(true);
            tableWF.setTableFitsPage(true);
            tableWF.getDefaultCell().setBorderWidth(1);
            tableWF.getDefaultCell().setHorizontalAlignment(Element.ALIGN_CENTER);
            // first row: protein acronym and sample name (or image prefix)
            // and startTime
            String collectName = lastCollectOSC.getImagePrefix();
            if (dataCollectionGroupVO.getBlSampleVO() != null
                    && dataCollectionGroupVO.getBlSampleVO().getCrystalVO() != null) {
                collectName = dataCollectionGroupVO.getBlSampleVO().getCrystalVO().getProteinVO().getAcronym()
                        + "-" + dataCollectionGroupVO.getBlSampleVO().getName();
            }
            tableWF.addCell(new Paragraph(collectName, FONT_DOC));

            String collectTime = lastCollectOSC.getStartTime().toString();
            Cell c = new Cell(new Paragraph(collectTime, FONT_DOC));
            c.setColspan(2);
            tableWF.addCell(c);

            // second row: first snapshot + cartography graphes (2 mesh)
            // first snapshot
            String imgCrystal = dcInfo.getPathJpgCrystal3();
            Cell cellCrystalImage = getCellImage(imgCrystal);
            tableWF.addCell(cellCrystalImage);
            // workflowMesh cartography
            Workflow3VO mxExpressOWF = dataCollectionGroupVO.getWorkflowVO();
            List<WorkflowMesh3VO> listWFMesh = new ArrayList<WorkflowMesh3VO>();
            Ejb3ServiceLocator ejb3ServiceLocator = Ejb3ServiceLocator.getInstance();
            WorkflowMesh3Service workflowMeshService = (WorkflowMesh3Service) ejb3ServiceLocator
                    .getLocalService(WorkflowMesh3Service.class);
            listWFMesh = workflowMeshService.findByWorkflowId(mxExpressOWF.getWorkflowId());

            if (listWFMesh != null && listWFMesh.size() > 0) {
                Cell cellImg1 = getMeshMapCell(listWFMesh.get(0));
                if (cellImg1 == null) {
                    tableWF.addCell(new Paragraph("Image not found", FONT_DOC));
                } else {
                    tableWF.addCell(cellImg1);
                }
                if (listWFMesh.size() > 1) {
                    Cell cellImg2 = getMeshMapCell(listWFMesh.get(1));
                    if (cellImg2 == null) {
                        tableWF.addCell(new Paragraph("Image not found", FONT_DOC));
                    } else {
                        tableWF.addCell(cellImg2);
                    }
                } else
                    tableWF.addCell(new Paragraph("No Workflow found", FONT_DOC));
            } else {
                tableWF.addCell(new Paragraph("No Workflow found", FONT_DOC));
                tableWF.addCell(new Paragraph("No Workflow found", FONT_DOC));
            }

            //
            // third row:
            // autoprocessing results
            Cell resultCell = getAutoProcResultStatus(dcInfo);
            resultCell.setColspan(3);
            resultCell.setHorizontalAlignment(Element.ALIGN_LEFT);
            tableWF.addCell(resultCell);

            Integer idDc = -1;
            for (int k = 0; k < dataCollectionList.size(); k++) {
                DataCollection3VO dcVo = dataCollectionList.get(k);
                if (dcVo.getDataCollectionId().equals(lastCollectOSC.getDataCollectionId())) {
                    idDc = k;
                    break;
                }
            }

            if (idDc != -1) {
                AutoProc3VO[] autoProcs = wrapper.getAutoProcs();
                AutoProcScalingStatistics3VO[] autoProcsOverall = wrapper.getScalingStatsOverall();
                AutoProcScalingStatistics3VO[] autoProcsInner = wrapper.getScalingStatsInner();
                AutoProcScalingStatistics3VO[] autoProcsOuter = wrapper.getScalingStatsOuter();

                AutoProc3VO autoProcValue = autoProcs[idDc];
                AutoProcScalingStatistics3VO autoProcOverall = autoProcsOverall[idDc];
                AutoProcScalingStatistics3VO autoProcInner = autoProcsInner[idDc];
                AutoProcScalingStatistics3VO autoProcOuter = autoProcsOuter[idDc];
                if (autoProcValue == null) {
                    Cell cNo = new Cell(new Paragraph("No autoprocessing results found", FONT_DOC));
                    cNo.setColspan(3);
                    cNo.setHorizontalAlignment(Element.ALIGN_LEFT);
                    tableWF.addCell(cNo);
                    document.add(tableWF);
                } else {
                    int noColSPG = 5;
                    Table tableSPG = new Table(noColSPG);
                    int[] headersWidth = new int[noColSPG];
                    int i = 0;

                    headersWidth[i++] = 7; // space group
                    headersWidth[i++] = 10; // completeness
                    headersWidth[i++] = 9; // resolution
                    headersWidth[i++] = 9; // rsymm
                    headersWidth[i++] = 12; // unit cell
                    tableSPG.setWidths(headersWidth);

                    tableSPG.setWidth(100); // percentage
                    tableSPG.setPadding(3);
                    tableSPG.setCellsFitPage(true);
                    tableSPG.setTableFitsPage(true);
                    tableSPG.getDefaultCell().setBorderWidth(1);
                    tableSPG.getDefaultCell().setHorizontalAlignment(Element.ALIGN_CENTER);

                    tableSPG.getDefaultCell().setGrayFill(GREY_FILL_HEADER);
                    tableSPG.addCell(new Paragraph("Space Group", FONT_DOC_BOLD));
                    tableSPG.addCell(new Paragraph("Completeness (Inner, Outer, Overall)", FONT_DOC_BOLD));
                    tableSPG.addCell(new Paragraph("Resolution", FONT_DOC_BOLD));
                    tableSPG.addCell(new Paragraph("Rsymm (Inner, Outer, Overall)", FONT_DOC_BOLD));
                    tableSPG.addCell(new Paragraph("Unit Cell (a, b, c, alpha, beta, gamma)", FONT_DOC_BOLD));

                    tableSPG.getDefaultCell().setGrayFill(GREY_FILL_DATA);

                    // space group
                    if (autoProcValue != null && autoProcValue.getSpaceGroup() != null) {
                        Paragraph p = new Paragraph(autoProcValue.getSpaceGroup(), FONT_DOC);
                        tableSPG.addCell(p);
                    } else
                        tableSPG.addCell("");

                    // completeness, rsymm, processed resolution
                    String completenessString = new String();
                    String rSymmString = new String();
                    String resolutionString = new String();

                    if (autoProcOverall != null && autoProcInner != null && autoProcOuter != null) {
                        completenessString += df2.format(autoProcInner.getCompleteness()) + "\n"
                                + df2.format(autoProcOuter.getCompleteness()) + "\n"
                                + df2.format(autoProcOverall.getCompleteness());
                        rSymmString += (autoProcInner.getRmerge() == null ? ""
                                : df2.format(autoProcInner.getRmerge()))
                                + "\n"
                                + (autoProcOuter.getRmerge() == null ? ""
                                        : df2.format(autoProcOuter.getRmerge()))
                                + "\n" + (autoProcOverall.getRmerge() == null ? ""
                                        : df2.format(autoProcOverall.getRmerge()));
                        resolutionString += autoProcInner.getResolutionLimitLow() + " - "
                                + autoProcInner.getResolutionLimitHigh() + "\n"
                                + autoProcOuter.getResolutionLimitLow() + " - "
                                + autoProcOuter.getResolutionLimitHigh() + "\n"
                                + autoProcOverall.getResolutionLimitLow() + " - "
                                + autoProcOverall.getResolutionLimitHigh();
                    }
                    tableSPG.addCell(new Paragraph(completenessString, FONT_DOC));
                    tableSPG.addCell(new Paragraph(resolutionString, FONT_DOC));
                    tableSPG.addCell(new Paragraph(rSymmString, FONT_DOC));

                    // unit cell
                    if (autoProcValue != null && autoProcValue.getSpaceGroup() != null) {
                        tableSPG.addCell(new Paragraph("" + autoProcValue.getRefinedCellA() + ", "
                                + autoProcValue.getRefinedCellB() + ", " + autoProcValue.getRefinedCellC()
                                + "\n" + autoProcValue.getRefinedCellAlpha() + ", "
                                + autoProcValue.getRefinedCellBeta() + ", "
                                + autoProcValue.getRefinedCellGamma(), FONT_DOC));
                    } else {
                        tableSPG.addCell("");
                    }

                    document.add(tableWF);
                    document.add(new Paragraph("Best autoprocessing result", FONT_DOC));
                    document.add(tableSPG);
                } // end autoProc null
            } // end idDc -1

            //
            document.add(new Paragraph(" ", FONT_SPACE));

        } // end lastCollect null
        if (nextToLastCollectChar != null) {
            DataCollectionInformation dcInfo = dcExporter.getDataCollectionInformation(nextToLastCollectChar,
                    getSampleRankingVO(nextToLastCollectChar.getDataCollectionId()),
                    getAutoProcRankingVO(nextToLastCollectChar.getDataCollectionId()));

            if (dcInfo.getSpacegroup() != "") {
                document.add(new Paragraph("EDNA characterisation output and collect strategy", FONT_DOC));
            }
            setEDNATable2(document, dcInfo);
            setStrategyTable2(document, dcInfo);
        }
    } // end dataCollectionGroup null
}

From source file:ispyb.client.mx.collection.PdfRtfExporter.java

License:Open Source License

/**
 * set the autoproc results table, if no autoProc add a cell at the end of
 * topTable//from  www  .  j  av a 2  s  .  c o m
 * 
 * @param document
 * @param topTable
 * @param collect
 * @throws Exception
 */
private void setAutoProcResultsTable(Document document, DataCollectionInformation collect) throws Exception {
    Integer idDc = -1;
    for (int k = 0; k < dataCollectionList.size(); k++) {
        DataCollection3VO dcVo = dataCollectionList.get(k);
        if (dcVo.getDataCollectionId().equals(collect.getDataCollectionId())) {
            idDc = k;
            break;
        }
    }

    if (idDc != -1) {
        AutoProc3VO[] autoProcs = wrapper.getAutoProcs();
        AutoProcScalingStatistics3VO[] autoProcsOverall = wrapper.getScalingStatsOverall();
        AutoProcScalingStatistics3VO[] autoProcsInner = wrapper.getScalingStatsInner();
        AutoProcScalingStatistics3VO[] autoProcsOuter = wrapper.getScalingStatsOuter();

        AutoProc3VO autoProcValue = autoProcs[idDc];
        AutoProcScalingStatistics3VO autoProcOverall = autoProcsOverall[idDc];
        AutoProcScalingStatistics3VO autoProcInner = autoProcsInner[idDc];
        AutoProcScalingStatistics3VO autoProcOuter = autoProcsOuter[idDc];
        if (autoProcValue == null) {
            // Cell cNo = new Cell(new
            // Paragraph("No autoprocessing results found", FONT_DOC));
            // cNo.setHorizontalAlignment(Element.ALIGN_LEFT);
            // Table tableNR = new Table(1);
            // tableNR.setWidth(100); // percentage
            // tableNR.setPadding(3);
            // tableNR.setCellsFitPage(true);
            // tableNR.setTableFitsPage(true);
            // tableNR.getDefaultCell().setBorderWidth(1);
            // tableNR.getDefaultCell().setHorizontalAlignment(Element.ALIGN_LEFT);
            // tableNR.addCell(cNo);
            // document.add(tableNR);
        } else {
            int noColSPG = 5;
            Table tableSPG = new Table(noColSPG);
            int[] headersWidth = new int[noColSPG];
            int i = 0;

            headersWidth[i++] = 7; // space group
            headersWidth[i++] = 10; // completeness
            headersWidth[i++] = 9; // resolution
            headersWidth[i++] = 9; // rsymm
            headersWidth[i++] = 12; // unit cell
            tableSPG.setWidths(headersWidth);

            tableSPG.setWidth(100); // percentage
            tableSPG.setPadding(3);
            tableSPG.setCellsFitPage(true);
            tableSPG.setTableFitsPage(true);
            tableSPG.getDefaultCell().setBorderWidth(1);
            tableSPG.getDefaultCell().setHorizontalAlignment(Element.ALIGN_CENTER);

            tableSPG.getDefaultCell().setGrayFill(GREY_FILL_HEADER);
            tableSPG.addCell(new Paragraph("Space Group", FONT_DOC_BOLD));
            tableSPG.addCell(new Paragraph("Completeness (Inner, Outer, Overall)", FONT_DOC_BOLD));
            tableSPG.addCell(new Paragraph("Resolution", FONT_DOC_BOLD));
            tableSPG.addCell(new Paragraph("Rsymm (Inner, Outer, Overall)", FONT_DOC_BOLD));
            tableSPG.addCell(new Paragraph("Unit Cell (a, b, c, alpha, beta, gamma)", FONT_DOC_BOLD));

            tableSPG.getDefaultCell().setGrayFill(GREY_FILL_DATA);

            // space group
            if (autoProcValue != null && autoProcValue.getSpaceGroup() != null) {
                Paragraph p = new Paragraph(autoProcValue.getSpaceGroup(), FONT_DOC);
                tableSPG.addCell(p);
            } else
                tableSPG.addCell("");

            // completeness, rsymm, processed resolution
            String completenessString = new String();
            String rSymmString = new String();
            String resolutionString = new String();

            if (autoProcOverall != null && autoProcInner != null && autoProcOuter != null) {
                completenessString += df2.format(autoProcInner.getCompleteness()) + "\n"
                        + df2.format(autoProcOuter.getCompleteness()) + "\n"
                        + df2.format(autoProcOverall.getCompleteness());
                rSymmString += (autoProcInner.getRmerge() == null ? "" : df2.format(autoProcInner.getRmerge()))
                        + "\n"
                        + (autoProcOuter.getRmerge() == null ? "" : df2.format(autoProcOuter.getRmerge()))
                        + "\n"
                        + (autoProcOverall.getRmerge() == null ? "" : df2.format(autoProcOverall.getRmerge()));
                resolutionString += autoProcInner.getResolutionLimitLow() + " - "
                        + autoProcInner.getResolutionLimitHigh() + "\n" + autoProcOuter.getResolutionLimitLow()
                        + " - " + autoProcOuter.getResolutionLimitHigh() + "\n"
                        + autoProcOverall.getResolutionLimitLow() + " - "
                        + autoProcOverall.getResolutionLimitHigh();
            }
            tableSPG.addCell(new Paragraph(completenessString, FONT_DOC));
            tableSPG.addCell(new Paragraph(resolutionString, FONT_DOC));
            tableSPG.addCell(new Paragraph(rSymmString, FONT_DOC));

            // unit cell
            if (autoProcValue != null && autoProcValue.getSpaceGroup() != null) {
                tableSPG.addCell(new Paragraph("" + autoProcValue.getRefinedCellA() + ", "
                        + autoProcValue.getRefinedCellB() + ", " + autoProcValue.getRefinedCellC() + "\n"
                        + autoProcValue.getRefinedCellAlpha() + ", " + autoProcValue.getRefinedCellBeta() + ", "
                        + autoProcValue.getRefinedCellGamma(), FONT_DOC));
            } else {
                tableSPG.addCell("");
            }
            document.add(tableSPG);
        } // end autoProc null
    } // end idDc -1

    //
    document.add(new Paragraph(" ", FONT_SPACE));
}

From source file:ispyb.client.mx.results.ExportAutoProcAction.java

License:Open Source License

private void setAutoProcInfo(Document document) throws Exception {
    // header/* ww  w.j  a  va  2 s.  c o m*/
    Table headerTable = new Table(1);
    headerTable.getDefaultCell().setBorderWidth(0);
    headerTable.setBorderWidth(0);
    headerTable.setCellsFitPage(true);
    headerTable.setAlignment(Element.ALIGN_LEFT);
    headerTable.getDefaultCell().setHorizontalAlignment(Element.ALIGN_LEFT);
    headerTable.getDefaultCell().setBackgroundColor(PdfRtfExporter.LIGHT_YELLOW_COLOR);
    headerTable.getDefaultCell().setLeading(3);
    headerTable.setWidth(100); // percentage
    headerTable
            .addCell(new Paragraph("Crystal data and data-collection statistics", PdfRtfExporter.FONT_DOC_11));
    headerTable.addCell(new Paragraph("Values in parentheses are for the highest resolution shell.",
            PdfRtfExporter.FONT_DOC_11));
    document.add(headerTable);
    document.add(new Paragraph(" ", PdfRtfExporter.VERY_SMALL_FONT));
    // auto proc table
    Table autoProcTable = new Table(2);
    autoProcTable.getDefaultCell().setBorderWidth(0);
    autoProcTable.setBorderWidth(0);
    autoProcTable.setCellsFitPage(true);
    autoProcTable.setAlignment(Element.ALIGN_LEFT);
    autoProcTable.getDefaultCell().setHorizontalAlignment(Element.ALIGN_LEFT);
    // autoProcTable.getDefaultCell().setLeading(3);
    autoProcTable.setPadding(2);
    autoProcTable.setWidth(100); // percentage
    // data
    String spaceGroup = autoProc == null ? "" : autoProc.getSpaceGroup();
    String unitCell_a = autoProc == null ? "" : autoProc.getRefinedCellA().toString();
    String unitCell_b = autoProc == null ? "" : autoProc.getRefinedCellB().toString();
    String unitCell_c = autoProc == null ? "" : autoProc.getRefinedCellC().toString();
    String unitCell_alpha = autoProc == null ? "" : autoProc.getRefinedCellAlpha().toString();
    String unitCell_beta = autoProc == null ? "" : autoProc.getRefinedCellBeta().toString();
    String unitCell_gamma = autoProc == null ? "" : autoProc.getRefinedCellGamma().toString();
    String resolutionRange = "";
    String nTotalObservations = "";
    String nTotalUniqueReflections = "";
    String completeness = "";
    String multiplicity = "";
    String isigma = "";
    String rmerge = "";
    if (autoProcStatisticsOverall != null) {
        resolutionRange = autoProcStatisticsOverall.getResolutionLimitLow() + " - "
                + autoProcStatisticsOverall.getResolutionLimitHigh();
        nTotalObservations = "" + autoProcStatisticsOverall.getnTotalObservations();
        nTotalUniqueReflections = "" + (autoProcStatisticsOverall.getnTotalUniqueObservations() == null ? ""
                : autoProcStatisticsOverall.getnTotalUniqueObservations());
        completeness = "" + autoProcStatisticsOverall.getCompleteness();
        multiplicity = "" + autoProcStatisticsOverall.getMultiplicity();
        isigma = "" + autoProcStatisticsOverall.getMeanIoverSigI();
        rmerge = ""
                + (autoProcStatisticsOverall.getRmerge() == null ? "" : autoProcStatisticsOverall.getRmerge());
    }
    if (autoProcStatisticsOuter != null) {
        resolutionRange += " (" + autoProcStatisticsOuter.getResolutionLimitLow() + " - "
                + autoProcStatisticsOuter.getResolutionLimitHigh() + ")";
        nTotalObservations += " (" + autoProcStatisticsOuter.getnTotalObservations() + ")";
        nTotalUniqueReflections += autoProcStatisticsOuter.getnTotalUniqueObservations() == null ? ""
                : (" (" + autoProcStatisticsOuter.getnTotalUniqueObservations() + ")");
        completeness += " (" + autoProcStatisticsOuter.getCompleteness() + ")";
        multiplicity += " (" + autoProcStatisticsOuter.getMultiplicity() + ")";
        isigma += " (" + autoProcStatisticsOuter.getMeanIoverSigI() + ")";
        rmerge += " ("
                + (autoProcStatisticsOuter.getRmerge() == null ? "" : autoProcStatisticsOuter.getRmerge())
                + ")";
    }
    // space group
    autoProcTable.addCell(new Paragraph("Space Group", PdfRtfExporter.FONT_DOC_11));
    autoProcTable.addCell(new Paragraph(spaceGroup, PdfRtfExporter.FONT_DOC_11));
    // unit cell parameters
    autoProcTable.addCell(
            new Paragraph("Unit-cell parameters (" + Constants.ANGSTROM + ")", PdfRtfExporter.FONT_DOC_11));
    autoProcTable.addCell(new Paragraph("", PdfRtfExporter.FONT_DOC_11));
    Paragraph pa = new Paragraph("\t a", PdfRtfExporter.FONT_DOC_11);
    pa.setAlignment(Element.ALIGN_JUSTIFIED);
    pa.setIndentationLeft(PdfRtfExporter.INDENTATION_LEFT);
    autoProcTable.addCell(pa);
    autoProcTable.addCell(new Paragraph(unitCell_a, PdfRtfExporter.FONT_DOC_11));
    Paragraph pb = new Paragraph("\t b", PdfRtfExporter.FONT_DOC_11);
    pb.setAlignment(Element.ALIGN_JUSTIFIED);
    pb.setIndentationLeft(PdfRtfExporter.INDENTATION_LEFT);
    autoProcTable.addCell(pb);
    autoProcTable.addCell(new Paragraph(unitCell_b, PdfRtfExporter.FONT_DOC_11));
    Paragraph pc = new Paragraph("\t c", PdfRtfExporter.FONT_DOC_11);
    pc.setAlignment(Element.ALIGN_JUSTIFIED);
    pc.setIndentationLeft(PdfRtfExporter.INDENTATION_LEFT);
    autoProcTable.addCell(pc);
    autoProcTable.addCell(new Paragraph(unitCell_c, PdfRtfExporter.FONT_DOC_11));
    // Issue 1733: cell angles info added
    Paragraph palpha = new Paragraph("\t alpha", PdfRtfExporter.FONT_DOC_11);
    palpha.setAlignment(Element.ALIGN_JUSTIFIED);
    palpha.setIndentationLeft(PdfRtfExporter.INDENTATION_LEFT);
    autoProcTable.addCell(palpha);
    autoProcTable.addCell(new Paragraph(unitCell_alpha, PdfRtfExporter.FONT_DOC_11));
    Paragraph pbeta = new Paragraph("\t beta", PdfRtfExporter.FONT_DOC_11);
    pbeta.setAlignment(Element.ALIGN_JUSTIFIED);
    pbeta.setIndentationLeft(PdfRtfExporter.INDENTATION_LEFT);
    autoProcTable.addCell(pbeta);
    autoProcTable.addCell(new Paragraph(unitCell_beta, PdfRtfExporter.FONT_DOC_11));
    Paragraph pgamma = new Paragraph("\t gamma", PdfRtfExporter.FONT_DOC_11);
    pgamma.setAlignment(Element.ALIGN_JUSTIFIED);
    pgamma.setIndentationLeft(PdfRtfExporter.INDENTATION_LEFT);
    autoProcTable.addCell(pgamma);
    autoProcTable.addCell(new Paragraph(unitCell_gamma, PdfRtfExporter.FONT_DOC_11));
    // resolution range
    autoProcTable.addCell(
            new Paragraph("Resolution range (" + Constants.ANGSTROM + ")", PdfRtfExporter.FONT_DOC_11));
    autoProcTable.addCell(new Paragraph(resolutionRange, PdfRtfExporter.FONT_DOC_11));
    // Observed reflections
    autoProcTable.addCell(new Paragraph("Observed reflections", PdfRtfExporter.FONT_DOC_11));
    autoProcTable.addCell(new Paragraph(nTotalObservations, PdfRtfExporter.FONT_DOC_11));
    // No. of unique reflections
    autoProcTable.addCell(new Paragraph("No. of unique reflections", PdfRtfExporter.FONT_DOC_11));
    autoProcTable.addCell(new Paragraph(nTotalUniqueReflections, PdfRtfExporter.FONT_DOC_11));
    // Completeness
    autoProcTable.addCell(new Paragraph("Completeness (%)", PdfRtfExporter.FONT_DOC_11));
    autoProcTable.addCell(new Paragraph(completeness, PdfRtfExporter.FONT_DOC_11));
    // multiplicity
    autoProcTable.addCell(new Paragraph("Multiplicity", PdfRtfExporter.FONT_DOC_11));
    autoProcTable.addCell(new Paragraph(multiplicity, PdfRtfExporter.FONT_DOC_11));
    new Phrase();
    // I/(I)
    Phrase p = Phrase.getInstance("<I/" + (char) 963 + "(I)>");
    p.setFont(PdfRtfExporter.FONT_DOC_11);
    autoProcTable.addCell(p);
    autoProcTable.addCell(new Paragraph(isigma, PdfRtfExporter.FONT_DOC_11));
    // Rmerge
    Chunk c1 = new Chunk("R", PdfRtfExporter.FONT_DOC_11);
    Chunk c2 = new Chunk("merge", PdfRtfExporter.FONT_DOC_EXPONENT);
    c2.setTextRise(PdfRtfExporter.TEXT_RISE_SUB);
    Chunk c3 = new Chunk("(%)", PdfRtfExporter.FONT_DOC_11);
    Chunk c4 = new Chunk("#", PdfRtfExporter.FONT_DOC_EXPONENT_BLUE);
    c4.setTextRise(PdfRtfExporter.TEXT_RISE_EXP);
    Paragraph rMergeParagraph = new Paragraph();
    rMergeParagraph.add(c1);
    rMergeParagraph.add(c2);
    rMergeParagraph.add(c3);
    rMergeParagraph.add(c4);
    autoProcTable.addCell(rMergeParagraph);
    autoProcTable.addCell(new Paragraph(rmerge, PdfRtfExporter.FONT_DOC_11));
    document.add(autoProcTable);
    document.add(new Paragraph(" ", PdfRtfExporter.FONT_DOC_11));
    // nota bene info
    Paragraph nbParagraph = new Paragraph();
    nbParagraph.add(c4);
    nbParagraph.add(c1);
    nbParagraph.add(c2);
    Chunk cesp = new Chunk(" ", PdfRtfExporter.FONT_DOC_11);
    Chunk c5 = new Chunk(" = ", PdfRtfExporter.FONT_DOC_11);
    nbParagraph.add(c5);
    Phrase pSigma = Phrase.getInstance("" + (char) 931);
    pSigma.setFont(PdfRtfExporter.FONT_DOC_11);
    nbParagraph.add(pSigma);
    Chunk chkl = new Chunk("hkl", PdfRtfExporter.FONT_DOC_EXPONENT);
    chkl.setTextRise(PdfRtfExporter.TEXT_RISE_SUB);
    nbParagraph.add(chkl);
    nbParagraph.add(cesp);
    nbParagraph.add(pSigma);
    Chunk ci = new Chunk("i", PdfRtfExporter.FONT_DOC_EXPONENT);
    ci.setTextRise(PdfRtfExporter.TEXT_RISE_SUB);
    nbParagraph.add(ci);
    Chunk c8 = new Chunk(" |I", PdfRtfExporter.FONT_DOC_11);
    nbParagraph.add(c8);
    nbParagraph.add(ci);
    Chunk c9 = new Chunk("(hkl) - (I(hkl))| / ", PdfRtfExporter.FONT_DOC_11);
    nbParagraph.add(c9);
    nbParagraph.add(pSigma);
    nbParagraph.add(chkl);
    nbParagraph.add(cesp);
    nbParagraph.add(pSigma);
    nbParagraph.add(ci);
    nbParagraph.add(cesp);
    Chunk c10 = new Chunk("I", PdfRtfExporter.FONT_DOC_11);
    nbParagraph.add(c10);
    nbParagraph.add(ci);
    Chunk c11 = new Chunk("(hkl), where ", PdfRtfExporter.FONT_DOC_11);
    nbParagraph.add(c11);
    Chunk c12 = new Chunk("I", PdfRtfExporter.FONT_DOC_11_ITALIC);
    nbParagraph.add(c12);
    Chunk cii = new Chunk("i", PdfRtfExporter.FONT_DOC_EXPONENT_ITALIC);
    cii.setTextRise(PdfRtfExporter.TEXT_RISE_SUB);
    nbParagraph.add(cii);
    Chunk c13 = new Chunk("(hkl)", PdfRtfExporter.FONT_DOC_11_ITALIC);
    nbParagraph.add(c13);
    Chunk c14 = new Chunk(" is the ", PdfRtfExporter.FONT_DOC_11);
    nbParagraph.add(c14);
    Chunk c15 = new Chunk("i", PdfRtfExporter.FONT_DOC_11_ITALIC);
    nbParagraph.add(c15);
    Chunk c16 = new Chunk("th observation of reflection ", PdfRtfExporter.FONT_DOC_11);
    nbParagraph.add(c16);
    Chunk chklI = new Chunk("hkl", PdfRtfExporter.FONT_DOC_11_ITALIC);
    nbParagraph.add(chklI);
    Chunk c17 = new Chunk(" and ", PdfRtfExporter.FONT_DOC_11);
    nbParagraph.add(c17);
    Chunk c18 = new Chunk("<I(hkl)> ", PdfRtfExporter.FONT_DOC_11_ITALIC);
    nbParagraph.add(c18);
    Chunk c19 = new Chunk(" is the weighted average intensity for all observations of reflection ",
            PdfRtfExporter.FONT_DOC_11);
    nbParagraph.add(c19);
    nbParagraph.add(chklI);
    Chunk c20 = new Chunk(".", PdfRtfExporter.FONT_DOC_11);
    nbParagraph.add(c20);
    document.add(nbParagraph);
    document.add(new Paragraph(" ", PdfRtfExporter.FONT_DOC_11));
}

From source file:ispyb.common.util.export.ExiPdfRtfExporter.java

License:Open Source License

/***
 * sets the sessions informations in the pdf document for fx or ix accounts
 * (Issue 1049)//from   www .  j a  v  a2  s  .  c  om
 * 
 * @param document
 * @throws Exception
 */
private void setSessionTable(Document document) throws Exception {
    String proposalCode = proposalDesc.substring(0, 2);
    if (slv != null && (proposalCode.toLowerCase().equals(Constants.PROPOSAL_CODE_FX)
            || proposalCode.equals(Constants.PROPOSAL_CODE_IX))) {
        if (proposalCode.toLowerCase().equals(Constants.PROPOSAL_CODE_FX)) { // session
            // title
            // only
            // for
            // FX
            // accounts
            document.add(new Paragraph("Session title:", FONT_TITLE));
            document.add(new Paragraph(slv.getSessionTitle(), FONT_DOC));
        }
        Table sessionTable = new Table(2);
        // sessionTable.setWidth(50); // percentage
        sessionTable.setPadding(3);
        sessionTable.setCellsFitPage(true);
        sessionTable.getDefaultCell().setBorderWidth(0);
        sessionTable.setBorder(0);
        sessionTable.getDefaultCell().setHorizontalAlignment(Element.ALIGN_LEFT);
        boolean hasData = false;
        // print only if the value > 0
        if (proposalCode.toLowerCase().equals(Constants.PROPOSAL_CODE_FX)) { // structure
            // determinations
            // only
            // for
            // FX
            // accounts
            if (slv.getStructureDeterminations() != null && !slv.getStructureDeterminations().isNaN()
                    && slv.getStructureDeterminations() != 0) {
                hasData = true;
                sessionTable.addCell(new Paragraph("Structure determinations", FONT_DOC_BOLD));
                sessionTable.addCell(new Paragraph("" + slv.getStructureDeterminations(), FONT_DOC));
            }
        }
        if (slv.getDewarTransport() != null && !slv.getDewarTransport().isNaN()
                && slv.getDewarTransport() != 0) {
            hasData = true;
            sessionTable.addCell(new Paragraph("Dewar transport", FONT_DOC_BOLD));
            sessionTable.addCell(new Paragraph("" + slv.getDewarTransport(), FONT_DOC));
        }
        if (slv.getDatabackupFrance() != null && !slv.getDatabackupFrance().isNaN()
                && slv.getDatabackupFrance() != 0) {
            hasData = true;
            sessionTable.addCell(new Paragraph("Data backup & Express delivery France", FONT_DOC_BOLD));
            sessionTable.addCell(new Paragraph("" + slv.getDatabackupFrance(), FONT_DOC));
        }
        if (slv.getDatabackupEurope() != null && !slv.getDatabackupEurope().isNaN()
                && slv.getDatabackupEurope() != 0) {
            hasData = true;
            sessionTable.addCell(new Paragraph("Data backup & Express delivery Europe", FONT_DOC_BOLD));
            sessionTable.addCell(new Paragraph("" + slv.getDatabackupEurope(), FONT_DOC));
        }
        if (hasData) {
            document.add(sessionTable);
        }
    }
}

From source file:net.bull.javamelody.swing.print.MPdfWriter.java

License:Apache License

/**
 * Ecrit le pdf.//from   ww  w  .j a  v  a2  s  .  co m
 *
 * @param table
 *           MBasicTable
 * @param out
 *           OutputStream
 * @throws IOException
 *            e
 */
protected void writePdf(final MBasicTable table, final OutputStream out) throws IOException {
    try {
        // step 1: creation of a document-object
        final Rectangle pageSize = landscape ? PageSize.A4.rotate() : PageSize.A4;
        final Document document = new Document(pageSize, 50, 50, 50, 50);
        // step 2: we create a writer that listens to the document and directs a PDF-stream to out
        createWriter(table, document, out);

        // we add some meta information to the document, and we open it
        document.addAuthor(System.getProperty("user.name"));
        document.addCreator("JavaMelody");
        final String title = buildTitle(table);
        if (title != null) {
            document.addTitle(title);
        }
        document.open();

        // ouvre la bote de dialogue Imprimer de Adobe Reader
        // if (writer instanceof PdfWriter) {
        // ((PdfWriter) writer).addJavaScript("this.print(true);", false);
        // }

        // table
        final Table datatable = new Table(table.getColumnCount());
        datatable.setCellsFitPage(true);
        datatable.setPadding(4);
        datatable.setSpacing(0);

        // headers
        renderHeaders(table, datatable);

        // data rows
        renderList(table, datatable);

        document.add(datatable);

        // we close the document
        document.close();
    } catch (final DocumentException e) {
        // on ne peut dclarer d'exception autre que IOException en throws
        throw new IOException(e);
    }
}

From source file:org.activityinfo.server.report.renderer.itext.ItextMapRenderer.java

License:Open Source License

private void renderLegend(MapReportElement element, Document doc) throws DocumentException, IOException {

    Table table = new Table(2);
    table.setBorderWidth(1);//  w  ww.  j a va  2 s . c  o  m
    table.setWidth(100f);
    table.setBorderColor(new Color(100, 100, 100));
    table.setPadding(5);
    table.setSpacing(0);
    table.setCellsFitPage(true);
    table.setTableFitsPage(true);
    table.setWidths(new int[] { 1, 3 });

    Cell cell = new Cell(I18N.CONSTANTS.legend());
    cell.setHeader(true);
    cell.setColspan(2);
    table.addCell(cell);
    table.endHeaders();

    for (MapLayerLegend legend : element.getContent().getLegends()) {

        Cell symbolCell = new Cell();
        symbolCell.setHorizontalAlignment(Element.ALIGN_CENTER);
        symbolCell.setVerticalAlignment(Element.ALIGN_MIDDLE);

        Image symbol = createLegendSymbol(legend, imageCreator);
        symbolCell.addElement(symbol);

        Cell descriptionCell = new Cell();
        addLegendDescription(element, legend.getDefinition(), descriptionCell);

        table.addCell(symbolCell);
        table.addCell(descriptionCell);
    }
    doc.add(table);
}