Download biojava3-core-3.0.5.jar
biojava3/biojava3-core-3.0.5.jar.zip( 235 k)
The download jar file contains the following class files or Java source files.
META-INF/MANIFEST.MF
META-INF/maven/org.biojava/biojava3-core/pom.properties
META-INF/maven/org.biojava/biojava3-core/pom.xml
org.biojava3.core.exceptions.CompoundNotFoundError.class
org.biojava3.core.exceptions.FileAccessError.class
org.biojava3.core.exceptions.HeaderParseException.class
org.biojava3.core.exceptions.ParserException.class
org.biojava3.core.exceptions.SequenceLengthError.class
org.biojava3.core.exceptions.TranslationException.class
org.biojava3.core.sequence.AccessionID.class
org.biojava3.core.sequence.BasicSequence.class
org.biojava3.core.sequence.CDSComparator.class
org.biojava3.core.sequence.CDSSequence.class
org.biojava3.core.sequence.ChromosomeSequence.class
org.biojava3.core.sequence.DNASequence.class
org.biojava3.core.sequence.DataSource.class
org.biojava3.core.sequence.ExonComparator.class
org.biojava3.core.sequence.ExonSequence.class
org.biojava3.core.sequence.GeneSequence.class
org.biojava3.core.sequence.IntronSequence.class
org.biojava3.core.sequence.MultipleSequenceAlignment.class
org.biojava3.core.sequence.ProteinSequence.class
org.biojava3.core.sequence.RNASequence.class
org.biojava3.core.sequence.SequenceComparator.class
org.biojava3.core.sequence.SequenceOptimizationHints.class
org.biojava3.core.sequence.StartCodonSequence.class
org.biojava3.core.sequence.StopCodonSequence.class
org.biojava3.core.sequence.Strand.class
org.biojava3.core.sequence.TaxonomyID.class
org.biojava3.core.sequence.TranscriptSequence.class
org.biojava3.core.sequence.compound.AmbiguityDNACompoundSet.class
org.biojava3.core.sequence.compound.AmbiguityRNACompoundSet.class
org.biojava3.core.sequence.compound.AminoAcidCompound.class
org.biojava3.core.sequence.compound.AminoAcidCompoundSet.class
org.biojava3.core.sequence.compound.CodonCompound.class
org.biojava3.core.sequence.compound.DNACompoundSet.class
org.biojava3.core.sequence.compound.NucleotideCompound.class
org.biojava3.core.sequence.compound.RNACompoundSet.class
org.biojava3.core.sequence.edits.Edit.class
org.biojava3.core.sequence.features.AbstractFeature.class
org.biojava3.core.sequence.features.DBReferenceInfo.class
org.biojava3.core.sequence.features.DatabaseReferenceInterface.class
org.biojava3.core.sequence.features.FeatureInterface.class
org.biojava3.core.sequence.features.FeaturesKeyWordInterface.class
org.biojava3.core.sequence.features.QualityFeature.class
org.biojava3.core.sequence.features.QuantityFeature.class
org.biojava3.core.sequence.features.TextFeature.class
org.biojava3.core.sequence.io.BufferedReaderBytesRead.class
org.biojava3.core.sequence.io.CasePreservingProteinSequenceCreator.class
org.biojava3.core.sequence.io.DNASequenceCreator.class
org.biojava3.core.sequence.io.FastaGeneWriter.class
org.biojava3.core.sequence.io.FastaReader.class
org.biojava3.core.sequence.io.FastaReaderHelper.class
org.biojava3.core.sequence.io.FastaSequenceParser.class
org.biojava3.core.sequence.io.FastaWriter.class
org.biojava3.core.sequence.io.FastaWriterHelper.class
org.biojava3.core.sequence.io.FileProxyDNASequenceCreator.class
org.biojava3.core.sequence.io.FileProxyProteinSequenceCreator.class
org.biojava3.core.sequence.io.GenericFastaHeaderFormat.class
org.biojava3.core.sequence.io.GenericFastaHeaderParser.class
org.biojava3.core.sequence.io.IUPACParser.class
org.biojava3.core.sequence.io.ProteinSequenceCreator.class
org.biojava3.core.sequence.io.RNASequenceCreator.class
org.biojava3.core.sequence.io.template.FastaHeaderFormatInterface.class
org.biojava3.core.sequence.io.template.FastaHeaderParserInterface.class
org.biojava3.core.sequence.io.template.SequenceCreatorInterface.class
org.biojava3.core.sequence.io.template.SequenceParserInterface.class
org.biojava3.core.sequence.io.util.ClasspathResource.class
org.biojava3.core.sequence.io.util.IOUtils.class
org.biojava3.core.sequence.loader.ArrayListProxySequenceReader.class
org.biojava3.core.sequence.loader.SequenceFileProxyLoader.class
org.biojava3.core.sequence.loader.StringProxySequenceReader.class
org.biojava3.core.sequence.loader.UniprotProxySequenceReader.class
org.biojava3.core.sequence.location.FuzzyPoint.class
org.biojava3.core.sequence.location.InsdcLocations.class
org.biojava3.core.sequence.location.InsdcParser.class
org.biojava3.core.sequence.location.LocationHelper.class
org.biojava3.core.sequence.location.SequenceLocation.class
org.biojava3.core.sequence.location.SimpleLocation.class
org.biojava3.core.sequence.location.SimplePoint.class
org.biojava3.core.sequence.location.template.AbstractLocation.class
org.biojava3.core.sequence.location.template.AccesionedLocation.class
org.biojava3.core.sequence.location.template.Location.class
org.biojava3.core.sequence.location.template.Point.class
org.biojava3.core.sequence.storage.ArrayListSequenceReader.class
org.biojava3.core.sequence.storage.BitSequenceReader.class
org.biojava3.core.sequence.storage.FourBitSequenceReader.class
org.biojava3.core.sequence.storage.JoiningSequenceReader.class
org.biojava3.core.sequence.storage.SequenceAsStringHelper.class
org.biojava3.core.sequence.storage.SingleCompoundSequenceReader.class
org.biojava3.core.sequence.storage.TwoBitSequenceReader.class
org.biojava3.core.sequence.template.AbstractCompound.class
org.biojava3.core.sequence.template.AbstractCompoundSet.class
org.biojava3.core.sequence.template.AbstractCompoundTranslator.class
org.biojava3.core.sequence.template.AbstractNucleotideCompoundSet.class
org.biojava3.core.sequence.template.AbstractSequence.class
org.biojava3.core.sequence.template.Accessioned.class
org.biojava3.core.sequence.template.ComplementCompound.class
org.biojava3.core.sequence.template.Compound.class
org.biojava3.core.sequence.template.CompoundSet.class
org.biojava3.core.sequence.template.CompoundTranslator.class
org.biojava3.core.sequence.template.LightweightProfile.class
org.biojava3.core.sequence.template.ProxySequenceReader.class
org.biojava3.core.sequence.template.Sequence.class
org.biojava3.core.sequence.template.SequenceMixin.class
org.biojava3.core.sequence.template.SequenceProxyView.class
org.biojava3.core.sequence.template.SequenceReader.class
org.biojava3.core.sequence.template.SequenceView.class
org.biojava3.core.sequence.transcription.CaseInsensitiveCompound.class
org.biojava3.core.sequence.transcription.DNAToRNATranslator.class
org.biojava3.core.sequence.transcription.Frame.class
org.biojava3.core.sequence.transcription.RNAToAminoAcidTranslator.class
org.biojava3.core.sequence.transcription.Table.class
org.biojava3.core.sequence.transcription.TranscriptionEngine.class
org.biojava3.core.sequence.views.ComplementSequenceView.class
org.biojava3.core.sequence.views.ReversedSequenceView.class
org.biojava3.core.sequence.views.RnaSequenceView.class
org.biojava3.core.sequence.views.WindowedSequence.class
org.biojava3.core.util.CRC64Checksum.class
org.biojava3.core.util.ConcurrencyTools.class
org.biojava3.core.util.Equals.class
org.biojava3.core.util.FlatFileCache.class
org.biojava3.core.util.Hashcoder.class
org.biojava3.core.util.InputStreamProvider.class
org.biojava3.core.util.PrettyXMLWriter.class
org.biojava3.core.util.SequenceTools.class
org.biojava3.core.util.SoftHashMap.class
org.biojava3.core.util.StringManipulationHelper.class
org.biojava3.core.util.UncompressInputStream.class
org.biojava3.core.util.XMLHelper.class
org.biojava3.core.util.XMLWriter.class
org/biojava3/core/sequence/iupac.txt
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