Java tutorial
/** * The contents of this file are subject to the Mozilla Public License * Version 1.1 (the "License"); you may not use this file except in * compliance with the License. You may obtain a copy of the License at * http://www.mozilla.org/MPL/ * * Software distributed under the License is distributed on an "AS IS" * basis, WITHOUT WARRANTY OF ANY KIND, either express or implied. See the * License for the specific language governing rights and limitations under * the License. * * The Original Code is OpenELIS code. * * Copyright (C) The Minnesota Department of Health. All Rights Reserved. */ package us.mn.state.health.lims.result.action; import java.util.ArrayList; import java.util.Calendar; import java.util.Date; import java.util.List; import java.util.Locale; import java.util.StringTokenizer; import javax.servlet.http.HttpServletRequest; import javax.servlet.http.HttpServletResponse; import org.apache.commons.beanutils.PropertyUtils; import org.apache.struts.Globals; import org.apache.struts.action.ActionForm; import org.apache.struts.action.ActionForward; import org.apache.struts.action.ActionMapping; import org.apache.struts.action.ActionMessages; import org.apache.struts.action.ActionRedirect; import us.mn.state.health.lims.analysis.dao.AnalysisDAO; import us.mn.state.health.lims.analysis.daoimpl.AnalysisDAOImpl; import us.mn.state.health.lims.analysis.valueholder.Analysis; import us.mn.state.health.lims.analyte.valueholder.Analyte; import us.mn.state.health.lims.common.action.BaseActionForm; import us.mn.state.health.lims.common.exception.LIMSCannotDeleteDependentRecordExistsException; import us.mn.state.health.lims.common.exception.LIMSRuntimeException; import us.mn.state.health.lims.common.log.LogEvent; import us.mn.state.health.lims.common.provider.validation.ResultsValueValidationProvider; import us.mn.state.health.lims.common.util.DateUtil; import us.mn.state.health.lims.common.util.StringUtil; import us.mn.state.health.lims.common.util.SystemConfiguration; import us.mn.state.health.lims.common.util.validator.ActionError; import us.mn.state.health.lims.dictionary.dao.DictionaryDAO; import us.mn.state.health.lims.dictionary.daoimpl.DictionaryDAOImpl; import us.mn.state.health.lims.dictionary.valueholder.Dictionary; import us.mn.state.health.lims.hibernate.HibernateUtil; import us.mn.state.health.lims.login.valueholder.UserSessionData; import us.mn.state.health.lims.note.dao.NoteDAO; import us.mn.state.health.lims.note.daoimpl.NoteDAOImpl; import us.mn.state.health.lims.note.valueholder.Note; import us.mn.state.health.lims.referencetables.valueholder.ReferenceTables; import us.mn.state.health.lims.result.dao.ResultDAO; import us.mn.state.health.lims.result.daoimpl.ResultDAOImpl; import us.mn.state.health.lims.result.valueholder.Result; import us.mn.state.health.lims.result.valueholder.TestAnalyte_TestResults; import us.mn.state.health.lims.result.valueholder.Test_TestAnalyte; import us.mn.state.health.lims.sample.dao.SampleDAO; import us.mn.state.health.lims.sample.daoimpl.SampleDAOImpl; import us.mn.state.health.lims.sample.valueholder.Sample; import us.mn.state.health.lims.test.dao.TestDAO; import us.mn.state.health.lims.test.daoimpl.TestDAOImpl; import us.mn.state.health.lims.test.valueholder.Test; import us.mn.state.health.lims.testanalyte.dao.TestAnalyteDAO; import us.mn.state.health.lims.testanalyte.daoimpl.TestAnalyteDAOImpl; import us.mn.state.health.lims.testanalyte.valueholder.TestAnalyte; import us.mn.state.health.lims.testresult.dao.TestResultDAO; import us.mn.state.health.lims.testresult.daoimpl.TestResultDAOImpl; import us.mn.state.health.lims.testresult.valueholder.TestResult; /** * @author diane benz * //AIS - bugzilla 1797 //AIS - bugzilla 1891 * //bugzilla 1802 - results entry redesign * bugzilla 1942 status changes * To change this generated comment * edit the template variable "typecomment": * Window>Preferences>Java>Templates. To enable and disable the creation * of type comments go to Window>Preferences>Java>Code Generation. */ public class ResultsEntryUpdateAction extends ResultsEntryBaseAction { private boolean isNew = false; protected ActionForward performAction(ActionMapping mapping, ActionForm form, HttpServletRequest request, HttpServletResponse response) throws Exception { // this is used if user has clicked notes icon and decides to update // (all results get updated, but we need to know which results to // display notes for) String notesAnalyteId = (String) request.getParameter("analyteId"); String notesRefId = null; String forward = FWD_SUCCESS; request.setAttribute(ALLOW_EDITS_KEY, "true"); request.setAttribute(PREVIOUS_DISABLED, "true"); request.setAttribute(NEXT_DISABLED, "true"); String refId = null; if (request.getAttribute(NOTES_REFID) != null) { refId = (String) request.getAttribute(NOTES_REFID); } //bugzilla 2227 String amendedAnalysisId = null; if (request.getParameter(ANALYSIS_ID) != null) { amendedAnalysisId = (String) request.getParameter(ANALYSIS_ID); } BaseActionForm dynaForm = (BaseActionForm) form; String accessionNumber = (String) dynaForm.get("accessionNumber"); String[] selectedTestResultIds = (String[]) dynaForm.get("selectedTestResultIds"); String[] resultValueN = (String[]) dynaForm.get("resultValueN"); String[] selectedResultIsReportableFlags = (String[]) dynaForm.get("selectedResultIsReportableFlags"); List testTestAnalytes = (List) dynaForm.get("testTestAnalytes"); String addedReflexTestIds = (String) dynaForm.get("addedReflexTestIds"); String addedReflexTestParentResultIds = (String) dynaForm.get("addedReflexTestParentResultIds"); // bugzilla 1882 String addedReflexTestParentAnalyteIds = (String) dynaForm.get("addedReflexTestParentAnalyteIds"); String addedReflexTestParentAnalysisIds = (String) dynaForm.get("addedReflexTestParentAnalysisIds"); String[] selectedTestIsReportableFlags = (String[]) dynaForm.get("selectedTestIsReportableFlags"); String domain = (String) dynaForm.get("domain"); //bugzilla 2254 String hasNewUnsatisfactoryResult = (String) dynaForm.get("hasNewUnsatisfactoryResult"); //bugzilla 1798: if coming from popup to link a parent test - this will have information String linkedParentInformationString = (String) dynaForm.get("linkedParentInformationString"); //bugzilla 1798: if User has clicked UNLINK FROM PARENT this string will have information String unlinkedParentInformationString = (String) dynaForm.get("unlinkedParentInformationString"); int pageResultCounter = 0; for (int j = 0; j < testTestAnalytes.size(); j++) { Test_TestAnalyte testTestAnalyte = (Test_TestAnalyte) testTestAnalytes.get(j); TestAnalyte_TestResults[] testAnalyteTestResults = (TestAnalyte_TestResults[]) testTestAnalyte .getTestAnalyteTestResults(); // remove the testresultid added by default for those numeric types for (int i = 0; i < testAnalyteTestResults.length; i++) { TestAnalyte_TestResults taTr = (TestAnalyte_TestResults) testAnalyteTestResults[i]; List testResults = taTr.getTestResults(); //bugzila 1908 fixing a bug where null and size not checked (this was found while testing 1908) if (testResults != null && testResults.size() > 0) { TestResult testresult = (TestResult) testResults.get(0); //bugzilla 2220 - Added titer type results to this logic (numeric and titer are in one category) if (testresult.getTestResultType() .equalsIgnoreCase(SystemConfiguration.getInstance().getNumericType()) || testresult.getTestResultType() .equalsIgnoreCase(SystemConfiguration.getInstance().getTiterType())) { if (StringUtil.isNullorNill(resultValueN[pageResultCounter])) { selectedTestResultIds[pageResultCounter] = ""; } } } pageResultCounter++; } } // server side validation of accessionNumber // validate on server-side sample accession number ActionMessages errors = null; try { errors = new ActionMessages(); errors = validateAll(request, errors, dynaForm); // System.out.println("Just validated accessionNumber"); } catch (Exception e) { //bugzilla 2154 LogEvent.logError("ResultsEntryUpdateAction", "performAction()", e.toString()); ActionError error = new ActionError("errors.ValidationException", null, null); errors.add(ActionMessages.GLOBAL_MESSAGE, error); } if (errors != null && errors.size() > 0) { saveErrors(request, errors); //bugzilla 2361 if (domain.equals(SystemConfiguration.getInstance().getHumanDomain())) { return mapping.findForward(FWD_FAIL_HUMAN); } else { return mapping.findForward(FWD_FAIL); } } // initialize the form dynaForm.initialize(mapping); // 1926 get sysUserId from login module UserSessionData usd = (UserSessionData) request.getSession().getAttribute(USER_SESSION_DATA); String sysUserId = String.valueOf(usd.getSystemUserId()); Date today = Calendar.getInstance().getTime(); Locale locale = (Locale) request.getSession().getAttribute("org.apache.struts.action.LOCALE"); String dateAsText = DateUtil.formatDateAsText(today, locale); org.hibernate.Transaction tx = HibernateUtil.getSession().beginTransaction(); if (!StringUtil.isNullorNill(accessionNumber)) { ResultDAO resultDAO = new ResultDAOImpl(); TestResultDAO testResultDAO = new TestResultDAOImpl(); AnalysisDAO analysisDAO = new AnalysisDAOImpl(); TestDAO testDAO = new TestDAOImpl(); NoteDAO noteDAO = new NoteDAOImpl(); TestAnalyteDAO testAnalyteDAO = new TestAnalyteDAOImpl(); SampleDAO sampleDAO = new SampleDAOImpl(); DictionaryDAO dictDAO = new DictionaryDAOImpl(); try { //bugzilla 1798 (added functionality to link a parent test to child test) //parse data from popup (link test) for subsequent update of child analysis String childAnalysisId = ""; Analysis linkedParentAnalysis = new Analysis(); Result linkedParentResult = new Result(); if (!StringUtil.isNullorNill(linkedParentInformationString)) { String idSeparator = SystemConfiguration.getInstance().getDefaultIdSeparator(); StringTokenizer st = new StringTokenizer(linkedParentInformationString, idSeparator); String parentAnalysisId = ""; String parentResultId = ""; List listOfIds = new ArrayList(); while (st.hasMoreElements()) { String id = (String) st.nextElement(); listOfIds.add(id); } //see resultsEntryLinkChildTestToParentTestResultPopup.jsp childAnalysisId = (String) listOfIds.get(0); parentAnalysisId = (String) listOfIds.get(1); parentResultId = (String) listOfIds.get(2); linkedParentAnalysis.setId(parentAnalysisId); linkedParentResult.setId(parentResultId); analysisDAO.getData(linkedParentAnalysis); resultDAO.getData(linkedParentResult); } //end 1798 Sample sample = new Sample(); sample.setAccessionNumber(accessionNumber); sample = sampleDAO.getSampleByAccessionNumber(accessionNumber); int pageResultIndex = 0; // pre-process the reflex tests List listOfTestsThatTriggeredReflex = new ArrayList(); List listOfTestResultsThatTriggeredReflex = new ArrayList(); // bugzilla 1882 List listOfAnalytesThatTriggeredReflex = new ArrayList(); List listOfAnalysesThatTriggeredReflex = new ArrayList(); List listOfResultsThatTriggeredReflex = new ArrayList(); List listOfAddedTests = new ArrayList(); if (!StringUtil.isNullorNill(addedReflexTestIds) && !StringUtil.isNullorNill(addedReflexTestParentResultIds)) { String idSeparator = SystemConfiguration.getInstance().getDefaultIdSeparator(); // populate list of parent results StringTokenizer parentResultTokenizer = new StringTokenizer(addedReflexTestParentResultIds, idSeparator); while (parentResultTokenizer.hasMoreElements()) { String testResultId = (String) parentResultTokenizer.nextElement(); TestResult testResult = new TestResult(); testResult.setId(testResultId); testResultDAO.getData(testResult); listOfTestResultsThatTriggeredReflex.add(testResult); String testId = testResult.getTest().getId(); listOfTestsThatTriggeredReflex.add(testId); } StringTokenizer addedTestTokenizer = new StringTokenizer(addedReflexTestIds, idSeparator); while (addedTestTokenizer.hasMoreElements()) { String testId = (String) addedTestTokenizer.nextElement(); // System.out // .println("This is a addedTestToken " + testId); Test test = new Test(); test.setId(testId); testDAO.getData(test); listOfAddedTests.add(test); } // bugzilla 1882 populate list of parent analytes StringTokenizer parentAnalyteTokenizer = new StringTokenizer(addedReflexTestParentAnalyteIds, idSeparator); while (parentAnalyteTokenizer.hasMoreElements()) { String testAnalyteId = (String) parentAnalyteTokenizer.nextElement(); TestAnalyte testAnalyte = new TestAnalyte(); testAnalyte.setId(testAnalyteId); testAnalyteDAO.getData(testAnalyte); listOfAnalytesThatTriggeredReflex.add(testAnalyte); } // bugzilla 1882 populate list of parent analyses StringTokenizer parentAnalysisTokenizer = new StringTokenizer(addedReflexTestParentAnalysisIds, idSeparator); while (parentAnalysisTokenizer.hasMoreElements()) { String analysisId2 = (String) parentAnalysisTokenizer.nextElement(); Analysis analysis2 = new Analysis(); analysis2.setId(analysisId2); listOfAnalysesThatTriggeredReflex.add(analysis2); } } for (int x = 0; x < testTestAnalytes.size(); x++) { Test_TestAnalyte test_testAnalyte = (Test_TestAnalyte) testTestAnalytes.get(x); TestAnalyte_TestResults[] testAnalyteTestResults = (TestAnalyte_TestResults[]) test_testAnalyte .getTestAnalyteTestResults(); Analysis analysis = test_testAnalyte.getAnalysis(); //bugzilla 1942 (if results for all REQUIRED test analytes have been entered then results entry is considered complete) boolean areResultsForRequiredTestAnalytesEntered = true; //bugzilla 1942 completedDate on analysis should only be update if // results entry is completed = areResultsForRequiredTestAnalytesEntered is true // AND if at least one result has changed boolean atLeastOneRequiredResultHasChanged = false; for (int i = 0; i < testAnalyteTestResults.length; i++) { TestAnalyte_TestResults taTr = (TestAnalyte_TestResults) testAnalyteTestResults[i]; String selectedTestResultId = taTr.getSelectedTestResultId(); TestAnalyte ta = taTr.getTestAnalyte(); Result result = new Result(); Result[] resultsFromTestTestAnalyte = test_testAnalyte.getResults(); for (int j = 0; j < resultsFromTestTestAnalyte.length; j++) { Result res = (Result) resultsFromTestTestAnalyte[j]; if (res != null && !StringUtil.isNullorNill(res.getId())) { if (res.getAnalyte().getId().equals(ta.getAnalyte().getId())) { result = res; break; } } } // bugzilla 1926 result.setSysUserId(sysUserId); //bugzilla 1942 boolean noResult = true; if (!StringUtil.isNullorNill(selectedTestResultId)) { if (!StringUtil.isNullorNill(selectedTestResultIds[pageResultIndex])) { noResult = false; TestResult tr = new TestResult(); tr.setId(selectedTestResultIds[pageResultIndex]); testResultDAO.getData(tr); //bugzilla 1942: find out if required results have changed on this test (needed to determine whether to update completed date) if (result.getIsReportable() != null && result.getIsReportable().equals(YES)) { if (result.getTestResult() != null && !StringUtil.isNullorNill(result.getTestResult().getValue())) { String oldResult = result.getTestResult().getValue(); if (!oldResult.equals(tr.getValue())) { atLeastOneRequiredResultHasChanged = true; } } } // update existing selection result.setTestResult(tr); if (tr.getTestResultType() .equalsIgnoreCase(SystemConfiguration.getInstance().getNumericType())) { result.setValue(resultValueN[pageResultIndex]); } else if (tr.getTestResultType() .equalsIgnoreCase(SystemConfiguration.getInstance().getTiterType())) { String setTiter = "1:" + resultValueN[pageResultIndex]; result.setValue(setTiter); } else { result.setValue(tr.getValue()); //bugzilla 2028 check for UNSATISFACTORY dictionary type results // get from dictionary Dictionary dictionary = new Dictionary(); dictionary.setId(result.getValue()); dictDAO.getData(dictionary); } result.setAnalysis(analysis); result.setIsReportable(selectedResultIsReportableFlags[pageResultIndex]); if (!StringUtil.isNullorNill(notesAnalyteId)) { if (result.getAnalyte().getId().equals(notesAnalyteId)) { notesRefId = result.getId(); } } resultDAO.updateData(result); } else { // bugzilla 1942: delete existing result List results = new ArrayList(); //bugzilla 1942 check if result has notes - THEN DON'T ALLOW DELETE (per Christina/Nancy) Note note = new Note(); List notesByResult = new ArrayList(); //bugzilla 2571 go through ReferenceTablesDAO to get reference tables info ReferenceTables referenceTables = new ReferenceTables(); referenceTables .setId(SystemConfiguration.getInstance().getResultReferenceTableId()); //bugzilla 2571 go through ReferenceTablesDAO to get reference tables info note.setReferenceTables(referenceTables); note.setReferenceId(result.getId()); notesByResult = noteDAO.getAllNotesByRefIdRefTable(note); //bugzilla 1798 List childAnalysesByResult = new ArrayList(); childAnalysesByResult = analysisDAO.getAllChildAnalysesByResult(result); if (notesByResult != null && notesByResult.size() > 0) { Exception e = new LIMSCannotDeleteDependentRecordExistsException( "Cannot delete - dependent record exists for " + result.getId()); throw new LIMSRuntimeException("Error in Result updateData()", e); } //bugzilla 1798 else if (childAnalysesByResult != null && childAnalysesByResult.size() > 0) { Exception e = new LIMSCannotDeleteDependentRecordExistsException( "Cannot delete - dependent record exists for " + result.getId()); throw new LIMSRuntimeException("Error in Result updateData()", e); } else { results.add(result); resultDAO.deleteData(results); } } } else { if (!StringUtil.isNullorNill(selectedTestResultIds[pageResultIndex])) { // insert new result noResult = false; TestResult tr = new TestResult(); tr.setId(selectedTestResultIds[pageResultIndex]); testResultDAO.getData(tr); // insert Analyte analyte = ta.getAnalyte(); result.setAnalyte(analyte); result.setAnalysis(analysis); result.setTestResult(tr); if (tr.getTestResultType() .equalsIgnoreCase(SystemConfiguration.getInstance().getNumericType())) { result.setValue(resultValueN[pageResultIndex]); } else if (tr.getTestResultType() .equalsIgnoreCase(SystemConfiguration.getInstance().getTiterType())) { String setTiter = "1:" + resultValueN[pageResultIndex]; result.setValue(setTiter); } else { result.setValue(tr.getValue()); //bugzilla 2028 check for UNSATISFACTORY dictionary type results // get from dictionary Dictionary dictionary = new Dictionary(); dictionary.setId(result.getValue()); dictDAO.getData(dictionary); } result.setResultType(tr.getTestResultType()); result.setIsReportable(selectedResultIsReportableFlags[pageResultIndex]); result.setSortOrder(ta.getSortOrder()); //bugzilla 1942: find out if required results have changed on this test (needed to determine whether to update completed date) //this result has changed for sure if (ta.getIsReportable() != null && ta.getIsReportable().equals(YES)) { atLeastOneRequiredResultHasChanged = true; } resultDAO.insertData(result); // need to add this new result to // test_testAnalyte // for display on right side of screen after // update // on route to notes popup resultsFromTestTestAnalyte[i] = result; test_testAnalyte.setResults(resultsFromTestTestAnalyte); if (!StringUtil.isNullorNill(notesAnalyteId)) { if (result.getAnalyte().getId().equals(notesAnalyteId)) { notesRefId = result.getId(); } } } else { // do nothing } } //bugzilla 1942 (if results for all REQUIRED test analytes have been entered then results entry is considered complete) // per Christina - all reportable results must have a value for a test otherwise results entry is not completed // need to check test_analyte for isReportable flag if there is NO result record if (noResult && !StringUtil.isNullorNill(ta.getIsReportable()) && ta.getIsReportable().equals(YES)) { areResultsForRequiredTestAnalytesEntered = false; } // if this is analyte that notes icon was selected for // then // set the result id (IActionConstants.NOTES_REFID) in // the // request // this can be used in NotesPopupAction pageResultIndex++; } // bugzilla 1926 analysis.setSysUserId(sysUserId); analysis.setIsReportable(selectedTestIsReportableFlags[x]); //bugzilla 1942 (if results for all REQUIRED test analytes have been entered then results entry is considered complete) if (areResultsForRequiredTestAnalytesEntered) { //bugzilla 1967 only if not already released //bugzilla 1942 AND if at least one result has changed if (!analysis.getStatus() .equals(SystemConfiguration.getInstance().getAnalysisStatusReleased()) && atLeastOneRequiredResultHasChanged) { analysis.setStatus( SystemConfiguration.getInstance().getAnalysisStatusResultCompleted()); analysis.setCompletedDateForDisplay(dateAsText); } } else { analysis.setStatus(SystemConfiguration.getInstance().getAnalysisStatusAssigned()); analysis.setCompletedDateForDisplay(null); } //bugzilla 1798 also update parent analysis/parent result if link was requested for this analysis //link if (!StringUtil.isNullorNill(linkedParentInformationString) && childAnalysisId.equals(analysis.getId())) { analysis.setParentAnalysis(linkedParentAnalysis); analysis.setParentResult(linkedParentResult); } //unlink if (!StringUtil.isNullorNill(unlinkedParentInformationString) && unlinkedParentInformationString.equals(analysis.getId())) { analysis.setParentAnalysis(null); analysis.setParentResult(null); } analysisDAO.updateData(analysis); } // bugzilla 1882 if (listOfAnalytesThatTriggeredReflex.size() > 0) { //create listOfResultsThatTriggeredReflex from analysis/analyte for (int i = 0; i < listOfAnalysesThatTriggeredReflex.size(); i++) { Analysis analysisThatTriggered = (Analysis) listOfAnalysesThatTriggeredReflex.get(i); TestAnalyte analyteThatTriggered = (TestAnalyte) listOfAnalytesThatTriggeredReflex.get(i); Result result = new Result(); resultDAO.getResultByAnalysisAndAnalyte(result, analysisThatTriggered, analyteThatTriggered); listOfResultsThatTriggeredReflex.add(result); } // Are there any added tests (reflex tests) for (int i = 0; i < listOfAnalytesThatTriggeredReflex.size(); i++) { Analysis analysisThatTriggered = (Analysis) listOfAnalysesThatTriggeredReflex.get(i); analysisDAO.getData(analysisThatTriggered); TestAnalyte analyteThatTriggered = (TestAnalyte) listOfAnalytesThatTriggeredReflex.get(i); Result result = (Result) listOfResultsThatTriggeredReflex.get(i); Test test = (Test) listOfAddedTests.get(i); Analysis newAnalysis = new Analysis(); // TODO: need to populate this with actual data!!! newAnalysis.setAnalysisType("TEST"); newAnalysis.setSampleItem(analysisThatTriggered.getSampleItem()); newAnalysis.setTest(test); newAnalysis.setTestSection(test.getTestSection()); newAnalysis.setStatus(SystemConfiguration.getInstance().getAnalysisStatusAssigned()); newAnalysis.setParentAnalysis(analysisThatTriggered); newAnalysis.setParentResult(result); newAnalysis.setIsReportable(test.getIsReportable()); // bugzilla 1926 newAnalysis.setSysUserId(sysUserId); //bugzilla 2064 newAnalysis.setRevision(SystemConfiguration.getInstance().getAnalysisDefaultRevision()); //bugzilla 2013 added duplicateCheck parameter analysisDAO.insertData(newAnalysis, false); } } tx.commit(); // bugzilla 1703: introducing a confirmation message after // updates and inserts have succeeded! errors = new ActionMessages(); ActionError error = null; error = new ActionError("resultsentry.confirmupdate.message", null, null); errors.add(ActionMessages.GLOBAL_MESSAGE, error); saveErrors(request, errors); request.setAttribute(Globals.ERROR_KEY, errors); // end bugzilla 1703 } catch (LIMSRuntimeException lre) { //bugzilla 2154 LogEvent.logError("ResultsEntryUpdateAction", "performAction()", lre.toString()); tx.rollback(); errors = new ActionMessages(); ActionError error = null; if (lre.getException() instanceof org.hibernate.StaleObjectStateException) { error = new ActionError("errors.OptimisticLockException", null, null); } else if (lre.getException() instanceof LIMSCannotDeleteDependentRecordExistsException) { error = new ActionError("resultsentry.changetonoresult.error", null, null); } else { error = new ActionError("errors.UpdateException", null, null); } errors.add(ActionMessages.GLOBAL_MESSAGE, error); saveErrors(request, errors); request.setAttribute(Globals.ERROR_KEY, errors); // bugzilla 1485 // request.setAttribute(IActionConstants.ALLOW_EDITS_KEY, // "false"); //bugzilla 2361 if (domain.equals(SystemConfiguration.getInstance().getHumanDomain())) { forward = FWD_FAIL_HUMAN; } else { forward = FWD_FAIL; } } finally { HibernateUtil.closeSession(); } } PropertyUtils.setProperty(dynaForm, "accessionNumber", accessionNumber); PropertyUtils.setProperty(dynaForm, "selectedTestResultIds", selectedTestResultIds); PropertyUtils.setProperty(dynaForm, "resultValueN", resultValueN); PropertyUtils.setProperty(dynaForm, "selectedResultIsReportableFlags", selectedResultIsReportableFlags); PropertyUtils.setProperty(dynaForm, "selectedTestIsReportableFlags", selectedTestIsReportableFlags); PropertyUtils.setProperty(dynaForm, "domain", domain); PropertyUtils.setProperty(dynaForm, "testTestAnalytes", testTestAnalytes); if (!StringUtil.isNullorNill(notesAnalyteId)) { request.setAttribute(NOTES_REFID, notesRefId); request.setAttribute(NOTES_REFTABLE, SystemConfiguration.getInstance().getResultReferenceTableId()); } else { request.setAttribute(NOTES_REFID, refId); request.setAttribute(NOTES_REFTABLE, SystemConfiguration.getInstance().getResultReferenceTableId()); } //bugzilla 2311 //bugzilla 2361 if (!forward.equals(FWD_FAIL) && !forward.equals(FWD_FAIL_HUMAN)) { //bugzilla 2028 Qa Events - if any of the results are UNSATISFACTORY then route to QAEvents Entry //bugzilla 2227 - don't route to qa events if Note or Amend were clicked //bugzilla 2254 if (hasNewUnsatisfactoryResult.equals(TRUE) && !mapping.getPath().contains("Note") && !mapping.getPath().contains("Amend")) { forward = FWD_SUCCESS_QA_EVENTS_ENTRY; return getForward(mapping.findForward(forward), accessionNumber); } //bugzilla 2227 if (!StringUtil.isNullorNill(amendedAnalysisId)) { return getForward(mapping.findForward(forward), accessionNumber, amendedAnalysisId); } } return mapping.findForward(forward); } protected String getPageTitleKey() { if (isNew) { return "resultsentry.add.title"; } else { return "resultsentry.edit.title"; } } protected String getPageTitleKeyParameter(HttpServletRequest request, ActionForm form) { BaseActionForm dynaForm = (BaseActionForm) form; String accn = ""; if (dynaForm.get("accessionNumber") != null) { accn = (String) dynaForm.get("accessionNumber"); } return accn; } protected String getPageSubtitleKey() { if (isNew) { return "resultsentry.add.subtitle"; } else { return "resultsentry.edit.subtitle"; } } //bugzilla 2028 protected ActionForward getForward(ActionForward forward, String accessionNumber) { ActionRedirect redirect = new ActionRedirect(forward); if (!StringUtil.isNullorNill(accessionNumber)) redirect.addParameter(ACCESSION_NUMBER, accessionNumber); return redirect; } protected ActionForward getForward(ActionForward forward, String accessionNumber, String analysisId) { ActionRedirect redirect = new ActionRedirect(forward); if (!StringUtil.isNullorNill(accessionNumber)) redirect.addParameter(ACCESSION_NUMBER, accessionNumber); if (!StringUtil.isNullorNill(analysisId)) redirect.addParameter(ANALYSIS_ID, analysisId); return redirect; } //2227 //1856: cleanup - this method does not need to be in BaseAction private ActionMessages validateAll(HttpServletRequest request, ActionMessages errors, BaseActionForm dynaForm) throws Exception { // accession number validation against database (reusing ajax // validation logic) errors = validateAccessionNumber(request, errors, dynaForm); String messageKey = ""; // isReportableFlag must be set if a result was selected List testTestAnalytes = (List) dynaForm.get("testTestAnalytes"); String[] selectedTestResultIds = (String[]) dynaForm.get("selectedTestResultIds"); String[] selectedResultIsReportableFlags = (String[]) dynaForm.get("selectedResultIsReportableFlags"); for (int j = 0; j < testTestAnalytes.size(); j++) { Test_TestAnalyte testTestAnalyte = (Test_TestAnalyte) testTestAnalytes.get(j); TestAnalyte_TestResults[] testAnalyteTestResults = (TestAnalyte_TestResults[]) testTestAnalyte .getTestAnalyteTestResults(); for (int i = 0; i < testAnalyteTestResults.length; i++) { TestAnalyte_TestResults taTr = (TestAnalyte_TestResults) testAnalyteTestResults[i]; String selectedTestResultId = taTr.getSelectedTestResultId(); if (!StringUtil.isNullorNill(selectedTestResultId)) { if (!StringUtil.isNullorNill(selectedTestResultIds[i])) { if (StringUtil.isNullorNill(selectedResultIsReportableFlags[i])) { messageKey = "result.isReportable"; ActionError error = new ActionError("errors.invalid", getMessageForKey(messageKey), null); errors.add(ActionMessages.GLOBAL_MESSAGE, error); } } } } } // verify if "N" type values are validated String[] resultValueN = (String[]) dynaForm.get("resultValueN"); ResultsValueValidationProvider resultsValueValidator = new ResultsValueValidationProvider(); //bugzilla 2347, 2361 fix error message handling for (int i = 0; i < resultValueN.length; i++) { //bugzilla 2016: added bug fix where we were not checking to make sure selectedTestResultIds[i] is not null before validating //bugzilla 2439 need to check for null resultValueN[i] - best to use StringUtil.isNullorNill() if ((!StringUtil.isNullorNill(resultValueN[i]) && !resultValueN[i].equalsIgnoreCase("-1")) && !StringUtil.isNullorNill(selectedTestResultIds[i])) { String message = resultsValueValidator.validate(resultValueN[i], selectedTestResultIds[i], null); String[] msgArray = message.split(SystemConfiguration.getInstance().getDefaultIdSeparator()); String errorMess = msgArray[0]; if (errorMess.equalsIgnoreCase("invalid")) { ActionError error = null; if (msgArray[1].equals(SystemConfiguration.getInstance().getTiterType())) { error = new ActionError("resultsentry.invalidresultvalue.titer.message", msgArray[2], msgArray[3], null); } else { error = new ActionError("resultsentry.invalidresultvalue.numeric.message", msgArray[2], msgArray[3], null); } errors.add(ActionMessages.GLOBAL_MESSAGE, error); } } } return errors; } }