us.mn.state.health.lims.method.daoimpl.MethodDAOImpl.java Source code

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/**
* The contents of this file are subject to the Mozilla Public License
* Version 1.1 (the "License"); you may not use this file except in
* compliance with the License. You may obtain a copy of the License at
* http://www.mozilla.org/MPL/ 
* 
* Software distributed under the License is distributed on an "AS IS"
* basis, WITHOUT WARRANTY OF ANY KIND, either express or implied. See the
* License for the specific language governing rights and limitations under
* the License.
* 
* The Original Code is OpenELIS code.
* 
* Copyright (C) The Minnesota Department of Health.  All Rights Reserved.
*/
package us.mn.state.health.lims.method.daoimpl;

import java.util.ArrayList;
import java.util.List;
import java.util.Vector;

import org.apache.commons.beanutils.PropertyUtils;

import us.mn.state.health.lims.audittrail.dao.AuditTrailDAO;
import us.mn.state.health.lims.audittrail.daoimpl.AuditTrailDAOImpl;
import us.mn.state.health.lims.common.action.IActionConstants;
import us.mn.state.health.lims.common.daoimpl.BaseDAOImpl;
import us.mn.state.health.lims.common.exception.LIMSDuplicateRecordException;
import us.mn.state.health.lims.common.exception.LIMSRuntimeException;
import us.mn.state.health.lims.common.log.LogEvent;
import us.mn.state.health.lims.common.util.DateUtil;
import us.mn.state.health.lims.common.util.StringUtil;
import us.mn.state.health.lims.common.util.SystemConfiguration;
import us.mn.state.health.lims.hibernate.HibernateUtil;
import us.mn.state.health.lims.method.dao.MethodDAO;
import us.mn.state.health.lims.method.valueholder.Method;

/**
 * @author diane benz
 */
public class MethodDAOImpl extends BaseDAOImpl implements MethodDAO {

    public void deleteData(List methods) throws LIMSRuntimeException {
        //add to audit trail
        try {
            AuditTrailDAO auditDAO = new AuditTrailDAOImpl();
            for (int i = 0; i < methods.size(); i++) {
                Method data = (Method) methods.get(i);

                Method oldData = (Method) readMethod(data.getId());
                Method newData = new Method();

                String sysUserId = data.getSysUserId();
                String event = IActionConstants.AUDIT_TRAIL_DELETE;
                String tableName = "METHOD";
                auditDAO.saveHistory(newData, oldData, sysUserId, event, tableName);
            }
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("MethodDAOImpl", "AuditTrail deleteData()", e.toString());
            throw new LIMSRuntimeException("Error in Method AuditTrail deleteData()", e);
        }

        try {
            for (int i = 0; i < methods.size(); i++) {
                Method data = (Method) methods.get(i);
                Method cloneData = (Method) readMethod(data.getId());

                // Make the change to the object.
                cloneData.setIsActive(IActionConstants.NO);
                HibernateUtil.getSession().merge(cloneData);
                HibernateUtil.getSession().flush();
                HibernateUtil.getSession().clear();
                HibernateUtil.getSession().evict(cloneData);
                HibernateUtil.getSession().refresh(cloneData);
            }
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("MethodDAOImpl", "deleteData()", e.toString());
            throw new LIMSRuntimeException("Error in Method deleteData()", e);
        }
    }

    public boolean insertData(Method method) throws LIMSRuntimeException {

        try {
            // bugzilla 1482 throw Exception if active record already exists
            if (duplicateMethodExists(method)) {
                throw new LIMSDuplicateRecordException("Duplicate record exists for " + method.getMethodName());
            }

            String id = (String) HibernateUtil.getSession().save(method);
            method.setId(id);

            //bugzilla 1824 inserts will be logged in history table
            AuditTrailDAO auditDAO = new AuditTrailDAOImpl();
            String sysUserId = method.getSysUserId();
            String tableName = "METHOD";
            auditDAO.saveNewHistory(method, sysUserId, tableName);

            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();

        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("MethodDAOImpl", "insertData()", e.toString());
            throw new LIMSRuntimeException("Error in Method insertData()", e);
        }

        return true;
    }

    public void updateData(Method method) throws LIMSRuntimeException {
        // bugzilla 1482 throw Exception if active record already exists
        try {
            if (duplicateMethodExists(method)) {
                throw new LIMSDuplicateRecordException("Duplicate record exists for " + method.getMethodName());
            }
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("MethodDAOImpl", "updateData()", e.toString());
            throw new LIMSRuntimeException("Error in Method updateData()", e);
        }

        Method oldData = (Method) readMethod(method.getId());
        Method newData = method;

        //add to audit trail
        try {
            AuditTrailDAO auditDAO = new AuditTrailDAOImpl();
            String sysUserId = method.getSysUserId();
            String event = IActionConstants.AUDIT_TRAIL_UPDATE;
            String tableName = "METHOD";
            auditDAO.saveHistory(newData, oldData, sysUserId, event, tableName);
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("MethodDAOImpl", "AuditTrail updateData()", e.toString());
            throw new LIMSRuntimeException("Error in Method AuditTrail updateData()", e);
        }

        try {
            HibernateUtil.getSession().merge(method);
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();
            HibernateUtil.getSession().evict(method);
            HibernateUtil.getSession().refresh(method);
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("MethodDAOImpl", "updateData()", e.toString());
            throw new LIMSRuntimeException("Error in Method updateData()", e);
        }
    }

    public void getData(Method method) throws LIMSRuntimeException {
        try {
            Method meth = (Method) HibernateUtil.getSession().get(Method.class, method.getId());
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();
            if (meth != null) {
                // set the display dates for STARTED_DATE, COMPLETED_DATE
                String locale = SystemConfiguration.getInstance().getDefaultLocale().toString();

                if (meth.getActiveBeginDate() != null) {
                    meth.setActiveBeginDateForDisplay(
                            DateUtil.convertSqlDateToStringDate(meth.getActiveBeginDate(), locale));
                }
                if (meth.getActiveEndDate() != null) {
                    meth.setActiveEndDateForDisplay(
                            DateUtil.convertSqlDateToStringDate(meth.getActiveEndDate(), locale));
                }
                PropertyUtils.copyProperties(method, meth);

            } else {
                method.setId(null);
            }
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("MethodDAOImpl", "getData()", e.toString());
            throw new LIMSRuntimeException("Error in Method getData()", e);
        }
    }

    public List getAllMethods() throws LIMSRuntimeException {
        List list = new Vector();
        try {
            String sql = "from Method";
            org.hibernate.Query query = HibernateUtil.getSession().createQuery(sql);
            list = query.list();
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();

        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("MethodDAOImpl", "getAllMethods()", e.toString());
            throw new LIMSRuntimeException("Error in Method getAllMethods()", e);
        }

        return list;
    }

    public List getPageOfMethods(int startingRecNo) throws LIMSRuntimeException {
        List list = new Vector();
        try {
            // calculate maxRow to be one more than the page size
            int endingRecNo = startingRecNo + (SystemConfiguration.getInstance().getDefaultPageSize() + 1);

            //bugzilla 1399
            String sql = "from Method m order by m.methodName";
            org.hibernate.Query query = HibernateUtil.getSession().createQuery(sql);
            query.setFirstResult(startingRecNo - 1);
            query.setMaxResults(endingRecNo - 1);

            list = query.list();
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();

        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("MethodDAOImpl", "getPageOfMethods()", e.toString());
            throw new LIMSRuntimeException("Error in Method getPageOfMethods()", e);
        }

        return list;
    }

    public Method readMethod(String idString) {
        Method method = null;
        try {
            method = (Method) HibernateUtil.getSession().get(Method.class, idString);
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("MethodDAOImpl", "readMethod()", e.toString());
            throw new LIMSRuntimeException("Error in Method readMethod()", e);
        }

        return method;
    }

    public List getNextMethodRecord(String id) throws LIMSRuntimeException {

        return getNextRecord(id, "Method", Method.class);

    }

    public List getPreviousMethodRecord(String id) throws LIMSRuntimeException {

        return getPreviousRecord(id, "Method", Method.class);
    }

    // this is for autocomplete
    public List getMethods(String filter) throws LIMSRuntimeException {
        List list = new Vector();
        try {
            String sql = "from Method m where upper(m.methodName) like upper(:param) and m.isActive='Y' order by upper(m.methodName)";
            org.hibernate.Query query = HibernateUtil.getSession().createQuery(sql);
            query.setParameter("param", filter + "%");

            list = query.list();
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("MethodDAOImpl", "getMethods()", e.toString());
            throw new LIMSRuntimeException("Error in Method getMethods(String filter)", e);
        }
        return list;

    }

    public Method getMethodByName(Method method) throws LIMSRuntimeException {
        try {
            String sql = "from Method m where m.methodName = :param and m.isActive='Y'";
            org.hibernate.Query query = HibernateUtil.getSession().createQuery(sql);
            query.setParameter("param", method.getMethodName());

            List list = query.list();
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();
            Method m = null;
            if (list.size() > 0)
                m = (Method) list.get(0);

            return m;

        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("MethodDAOImpl", "getMethodByName()", e.toString());
            throw new LIMSRuntimeException("Error in Method getMethodByName()", e);
        }
    }

    //bugzilla 1411
    public Integer getTotalMethodCount() throws LIMSRuntimeException {
        return getTotalCount("Method", Method.class);
    }

    //overriding BaseDAOImpl bugzilla 1427 pass in name not id
    public List getNextRecord(String id, String table, Class clazz) throws LIMSRuntimeException {

        List list = new Vector();
        try {
            String sql = "from " + table + " t where name >= " + enquote(id) + " order by t.methodName";
            org.hibernate.Query query = HibernateUtil.getSession().createQuery(sql);
            query.setFirstResult(1);
            query.setMaxResults(2);

            list = query.list();

        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("MethodDAOImpl", "getNextRecord()", e.toString());
            throw new LIMSRuntimeException("Error in getNextRecord() for " + table, e);
        }

        return list;
    }

    //overriding BaseDAOImpl bugzilla 1427 pass in name not id
    public List getPreviousRecord(String id, String table, Class clazz) throws LIMSRuntimeException {

        List list = new Vector();
        try {
            String sql = "from " + table + " t order by t.methodName desc where name <= " + enquote(id);
            org.hibernate.Query query = HibernateUtil.getSession().createQuery(sql);
            query.setFirstResult(1);
            query.setMaxResults(2);

            list = query.list();
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("MethodDAOImpl", "getPreviousRecord()", e.toString());
            throw new LIMSRuntimeException("Error in getPreviousRecord() for " + table, e);
        }

        return list;
    }

    //bugzilla 1482
    private boolean duplicateMethodExists(Method method) throws LIMSRuntimeException {
        try {

            List list = new ArrayList();

            // not case sensitive hemolysis and Hemolysis are considered
            // duplicates
            String sql = "from Method t where trim(lower(t.methodName)) = :param and t.id != :param2";
            org.hibernate.Query query = HibernateUtil.getSession().createQuery(sql);
            query.setParameter("param", method.getMethodName().toLowerCase().trim());

            //initialize with 0 (for new records where no id has been generated yet
            String methodId = "0";
            if (!StringUtil.isNullorNill(method.getId())) {
                methodId = method.getId();
            }
            query.setParameter("param2", methodId);

            list = query.list();
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();

            if (list.size() > 0) {
                return true;
            } else {
                return false;
            }

        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("MethodDAOImpl", "duplicateMethodExists()", e.toString());
            throw new LIMSRuntimeException("Error in duplicateMethodExists()", e);
        }
    }

}