us.mn.state.health.lims.gender.daoimpl.GenderDAOImpl.java Source code

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/**
* The contents of this file are subject to the Mozilla Public License
* Version 1.1 (the "License"); you may not use this file except in
* compliance with the License. You may obtain a copy of the License at
* http://www.mozilla.org/MPL/ 
* 
* Software distributed under the License is distributed on an "AS IS"
* basis, WITHOUT WARRANTY OF ANY KIND, either express or implied. See the
* License for the specific language governing rights and limitations under
* the License.
* 
* The Original Code is OpenELIS code.
* 
* Copyright (C) The Minnesota Department of Health.  All Rights Reserved.
*/
package us.mn.state.health.lims.gender.daoimpl;

import org.apache.commons.beanutils.PropertyUtils;
import org.hibernate.HibernateException;
import org.hibernate.Query;
import us.mn.state.health.lims.audittrail.dao.AuditTrailDAO;
import us.mn.state.health.lims.audittrail.daoimpl.AuditTrailDAOImpl;
import us.mn.state.health.lims.common.action.IActionConstants;
import us.mn.state.health.lims.common.daoimpl.BaseDAOImpl;
import us.mn.state.health.lims.common.exception.LIMSDuplicateRecordException;
import us.mn.state.health.lims.common.exception.LIMSRuntimeException;
import us.mn.state.health.lims.common.log.LogEvent;
import us.mn.state.health.lims.common.util.StringUtil;
import us.mn.state.health.lims.common.util.SystemConfiguration;
import us.mn.state.health.lims.gender.dao.GenderDAO;
import us.mn.state.health.lims.gender.valueholder.Gender;
import us.mn.state.health.lims.hibernate.HibernateUtil;

import java.util.List;

/**
 * @author diane benz
 */
public class GenderDAOImpl extends BaseDAOImpl implements GenderDAO {

    public void deleteData(List genders) throws LIMSRuntimeException {
        try {
            AuditTrailDAO auditDAO = new AuditTrailDAOImpl();
            for (int i = 0; i < genders.size(); i++) {
                Gender data = (Gender) genders.get(i);

                Gender oldData = readGender(data.getId());
                Gender newData = new Gender();

                String sysUserId = data.getSysUserId();
                String event = IActionConstants.AUDIT_TRAIL_DELETE;
                String tableName = "GENDER";
                auditDAO.saveHistory(newData, oldData, sysUserId, event, tableName);
            }
        } catch (Exception e) {

            LogEvent.logError("GenderDAOImpl", "AuditTrail deleteData()", e.toString());
            throw new LIMSRuntimeException("Error in Gender AuditTrail deleteData()", e);
        }

        try {
            for (int i = 0; i < genders.size(); i++) {
                Gender data = (Gender) genders.get(i);
                data = readGender(data.getId());
                HibernateUtil.getSession().delete(data);
                HibernateUtil.getSession().flush();
                HibernateUtil.getSession().clear();
            }
        } catch (Exception e) {
            LogEvent.logError("GenderDAOImpl", "deleteData()", e.toString());
            throw new LIMSRuntimeException("Error in Gender deleteData()", e);
        }
    }

    public boolean insertData(Gender gender) throws LIMSRuntimeException {

        try {
            // bugzilla 1482 throw Exception if record already exists
            if (duplicateGenderExists(gender)) {
                throw new LIMSDuplicateRecordException("Duplicate record exists for " + gender.getGenderType());
            }

            String id = (String) HibernateUtil.getSession().save(gender);
            gender.setId(id);

            //bugzilla 1824 inserts will be logged in history table
            AuditTrailDAO auditDAO = new AuditTrailDAOImpl();
            String sysUserId = gender.getSysUserId();
            String tableName = "GENDER";
            auditDAO.saveNewHistory(gender, sysUserId, tableName);

            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("GenderDAOImpl", "insertData()", e.toString());
            throw new LIMSRuntimeException("Error in Gender insertData()", e);
        }

        return true;
    }

    public void updateData(Gender gender) throws LIMSRuntimeException {
        try {
            if (duplicateGenderExists(gender)) {
                throw new LIMSDuplicateRecordException("Duplicate record exists for " + gender.getGenderType());
            }
        } catch (Exception e) {
            LogEvent.logError("GenderDAOImpl", "updateData()", e.toString());
            throw new LIMSRuntimeException("Error in Gender updateData()", e);
        }

        Gender oldData = readGender(gender.getId());
        Gender newData = gender;

        //add to audit trail
        try {
            AuditTrailDAO auditDAO = new AuditTrailDAOImpl();
            String sysUserId = gender.getSysUserId();
            String event = IActionConstants.AUDIT_TRAIL_UPDATE;
            String tableName = "GENDER";
            auditDAO.saveHistory(newData, oldData, sysUserId, event, tableName);
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("GenderDAOImpl", "AuditTrail updateData()", e.toString());
            throw new LIMSRuntimeException("Error in Gender AuditTrail updateData()", e);
        }

        try {
            HibernateUtil.getSession().merge(gender);
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();
            HibernateUtil.getSession().evict(gender);
            HibernateUtil.getSession().refresh(gender);
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("GenderDAOImpl", "deleteData()", e.toString());
            throw new LIMSRuntimeException("Error in Gender updateData()", e);
        }
    }

    public void getData(Gender gender) throws LIMSRuntimeException {
        try {
            Gender gen = (Gender) HibernateUtil.getSession().get(Gender.class, gender.getId());
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();
            if (gen != null) {
                PropertyUtils.copyProperties(gender, gen);
            } else {
                gender.setId(null);
            }
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("GenderDAOImpl", "getData()", e.toString());
            throw new LIMSRuntimeException("Error in Gender getData()", e);
        }
    }

    public List getAllGenders() throws LIMSRuntimeException {
        List list;
        try {
            String sql = "from Gender";
            org.hibernate.Query query = HibernateUtil.getSession().createQuery(sql);
            //query.setMaxResults(10);
            //query.setFirstResult(3);
            list = query.list();
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("GenderDAOImpl", "getAllGenders()", e.toString());
            throw new LIMSRuntimeException("Error in Gender getAllGenders()", e);
        }

        return list;
    }

    public List getPageOfGenders(int startingRecNo) throws LIMSRuntimeException {
        List list;
        try {
            // calculate maxRow to be one more than the page size
            int endingRecNo = startingRecNo + (SystemConfiguration.getInstance().getDefaultPageSize() + 1);

            //bugzilla 1399
            String sql = "from Gender g order by g.description, g.genderType";
            org.hibernate.Query query = HibernateUtil.getSession().createQuery(sql);
            query.setFirstResult(startingRecNo - 1);
            query.setMaxResults(endingRecNo - 1);
            //query.setCacheMode(org.hibernate.CacheMode.REFRESH);

            list = query.list();
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("GenderDAOImpl", "getPageOfGenders()", e.toString());
            throw new LIMSRuntimeException("Error in Gender getPageOfGenders()", e);
        }

        return list;
    }

    public Gender readGender(String idString) {
        Gender gender;
        try {
            gender = (Gender) HibernateUtil.getSession().get(Gender.class, idString);
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();
        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("GenderDAOImpl", "readGender()", e.toString());
            throw new LIMSRuntimeException("Error in Gender readGender(idString)", e);
        }

        return gender;
    }

    public List getNextGenderRecord(String id) throws LIMSRuntimeException {

        return getNextRecord(id, "Gender", Gender.class);
    }

    @Override
    public Gender getGenderByType(String type) throws LIMSRuntimeException {
        String sql = "From Gender g where g.genderType = :type";
        try {
            Query query = HibernateUtil.getSession().createQuery(sql);
            query.setString("type", type);
            Gender gender = (Gender) query.uniqueResult();
            closeSession();
            return gender;
        } catch (HibernateException e) {
            handleException(e, "getGenderByType");
        }
        return null;
    }

    public List getPreviousGenderRecord(String id) throws LIMSRuntimeException {

        return getPreviousRecord(id, "Gender", Gender.class);
    }

    public Integer getTotalGenderCount() throws LIMSRuntimeException {
        return getTotalCount("Gender", Gender.class);
    }

    public List getNextRecord(String id, String table, Class clazz) throws LIMSRuntimeException {
        int currentId = Integer.valueOf(id);
        String tablePrefix = getTablePrefix(table);

        List list;

        try {
            String sql = "select g.id from Gender g order by g.description, g.genderType";
            org.hibernate.Query query = HibernateUtil.getSession().createQuery(sql);
            list = query.list();
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();
            int rrn = list.indexOf(String.valueOf(currentId));

            list = HibernateUtil.getSession().getNamedQuery(tablePrefix + "getNext").setFirstResult(rrn + 1)
                    .setMaxResults(2).list();

        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("GenderDAOImpl", "getPreviousRecord()", e.toString());
            throw new LIMSRuntimeException("Error in getPreviousRecord() for " + table, e);
        }

        return list;
    }

    public List getPreviousRecord(String id, String table, Class clazz) throws LIMSRuntimeException {
        int currentId = Integer.valueOf(id);
        String tablePrefix = getTablePrefix(table);

        List list;

        try {
            String sql = "select g.id from Gender g order by g.description desc, g.genderType desc";
            org.hibernate.Query query = HibernateUtil.getSession().createQuery(sql);
            list = query.list();
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();
            int rrn = list.indexOf(String.valueOf(currentId));

            list = HibernateUtil.getSession().getNamedQuery(tablePrefix + "getPrevious").setFirstResult(rrn + 1)
                    .setMaxResults(2).list();

        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("GenderDAOImpl", "getPreviousRecord()", e.toString());
            throw new LIMSRuntimeException("Error in getPreviousRecord() for " + table, e);
        }

        return list;
    }

    // bugzilla 1482
    private boolean duplicateGenderExists(Gender gender) throws LIMSRuntimeException {
        try {

            List list;

            // not case sensitive hemolysis and Hemolysis are considered
            // duplicates
            String sql = "from Gender t where trim(lower(t.genderType)) = :genderType and t.id != :genderId";
            Query query = HibernateUtil.getSession().createQuery(sql);
            query.setParameter("genderType", gender.getGenderType().toLowerCase().trim());

            // initialize with 0 (for new records where no id has been generated
            // yet
            String genderId = "0";
            if (!StringUtil.isNullorNill(gender.getId())) {
                genderId = gender.getId();
            }
            query.setInteger("genderId", Integer.parseInt(genderId));

            list = query.list();
            HibernateUtil.getSession().flush();
            HibernateUtil.getSession().clear();

            return list.size() > 0;

        } catch (Exception e) {
            //bugzilla 2154
            LogEvent.logError("GenderDAOImpl", "duplicateGenderExists()", e.toString());
            throw new LIMSRuntimeException("Error in duplicateGenderExists()", e);
        }
    }
}