Java tutorial
/* * Copyright 2016 Crown Copyright * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. * You may obtain a copy of the License at * * http://www.apache.org/licenses/LICENSE-2.0 * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. */ package uk.gov.gchq.gaffer.sparkaccumulo.operation.handler.javardd; import org.apache.commons.io.output.ByteArrayOutputStream; import org.apache.hadoop.conf.Configuration; import org.apache.spark.SparkConf; import org.apache.spark.api.java.JavaRDD; import org.apache.spark.api.java.JavaSparkContext; import org.junit.Test; import uk.gov.gchq.gaffer.commonutil.CommonConstants; import uk.gov.gchq.gaffer.data.element.Edge; import uk.gov.gchq.gaffer.data.element.Element; import uk.gov.gchq.gaffer.data.element.Entity; import uk.gov.gchq.gaffer.data.elementdefinition.view.View; import uk.gov.gchq.gaffer.graph.Graph; import uk.gov.gchq.gaffer.operation.GetOperation; import uk.gov.gchq.gaffer.operation.OperationException; import uk.gov.gchq.gaffer.operation.data.EdgeSeed; import uk.gov.gchq.gaffer.operation.data.EntitySeed; import uk.gov.gchq.gaffer.operation.impl.add.AddElements; import uk.gov.gchq.gaffer.spark.operation.javardd.GetJavaRDDOfElements; import uk.gov.gchq.gaffer.sparkaccumulo.operation.handler.AbstractGetRDDHandler; import uk.gov.gchq.gaffer.user.User; import java.io.DataOutputStream; import java.io.IOException; import java.util.ArrayList; import java.util.Collections; import java.util.HashSet; import java.util.List; import java.util.Set; import static org.junit.Assert.assertEquals; import static org.junit.Assert.fail; public class GetJavaRDDOfElementsHandlerTest { private final static String ENTITY_GROUP = "BasicEntity"; private final static String EDGE_GROUP = "BasicEdge"; @Test public void checkGetCorrectElementsInJavaRDDForEntitySeed() throws OperationException, IOException { final Graph graph1 = new Graph.Builder() .addSchema(getClass().getResourceAsStream("/schema/dataSchema.json")) .addSchema(getClass().getResourceAsStream("/schema/dataTypes.json")) .addSchema(getClass().getResourceAsStream("/schema/storeTypes.json")) .storeProperties(getClass().getResourceAsStream("/store.properties")).build(); final List<Element> elements = new ArrayList<>(); for (int i = 0; i < 10; i++) { final Entity entity = new Entity(ENTITY_GROUP); entity.setVertex("" + i); final Edge edge1 = new Edge(EDGE_GROUP); edge1.setSource("" + i); edge1.setDestination("B"); edge1.setDirected(false); edge1.putProperty("count", 2); final Edge edge2 = new Edge(EDGE_GROUP); edge2.setSource("" + i); edge2.setDestination("C"); edge2.setDirected(false); edge2.putProperty("count", 4); elements.add(edge1); elements.add(edge2); elements.add(entity); } final User user = new User(); graph1.execute(new AddElements(elements), user); final SparkConf sparkConf = new SparkConf().setMaster("local") .setAppName("testCheckGetCorrectElementsInJavaRDDForEntitySeed") .set("spark.serializer", "org.apache.spark.serializer.KryoSerializer") .set("spark.kryo.registrator", "uk.gov.gchq.gaffer.spark.serialisation.kryo.Registrator") .set("spark.driver.allowMultipleContexts", "true"); final JavaSparkContext sparkContext = new JavaSparkContext(sparkConf); // Create Hadoop configuration and serialise to a string final Configuration configuration = new Configuration(); final ByteArrayOutputStream baos = new ByteArrayOutputStream(); configuration.write(new DataOutputStream(baos)); final String configurationString = new String(baos.toByteArray(), CommonConstants.UTF_8); // Check get correct edges for "1" GetJavaRDDOfElements<EntitySeed> rddQuery = new GetJavaRDDOfElements.Builder<EntitySeed>() .javaSparkContext(sparkContext).seeds(Collections.singleton(new EntitySeed("1"))).build(); rddQuery.addOption(AbstractGetRDDHandler.HADOOP_CONFIGURATION_KEY, configurationString); JavaRDD<Element> rdd = graph1.execute(rddQuery, user); if (rdd == null) { fail("No RDD returned"); } final Set<Element> results = new HashSet<>(rdd.collect()); final Set<Element> expectedElements = new HashSet<>(); final Entity entity1 = new Entity(ENTITY_GROUP); entity1.setVertex("1"); final Edge edge1B = new Edge(EDGE_GROUP); edge1B.setSource("1"); edge1B.setDestination("B"); edge1B.setDirected(false); edge1B.putProperty("count", 2); final Edge edge1C = new Edge(EDGE_GROUP); edge1C.setSource("1"); edge1C.setDestination("C"); edge1C.setDirected(false); edge1C.putProperty("count", 4); expectedElements.add(entity1); expectedElements.add(edge1B); expectedElements.add(edge1C); assertEquals(expectedElements, results); // Check get correct edges for "1" when specify entities only rddQuery = new GetJavaRDDOfElements.Builder<EntitySeed>().javaSparkContext(sparkContext) .seeds(Collections.singleton(new EntitySeed("1"))) .view(new View.Builder().entity(ENTITY_GROUP).build()).build(); rddQuery.addOption(AbstractGetRDDHandler.HADOOP_CONFIGURATION_KEY, configurationString); rdd = graph1.execute(rddQuery, user); if (rdd == null) { fail("No RDD returned"); } results.clear(); results.addAll(rdd.collect()); expectedElements.clear(); expectedElements.add(entity1); assertEquals(expectedElements, results); // Check get correct edges for "1" when specify edges only rddQuery = new GetJavaRDDOfElements.Builder<EntitySeed>().javaSparkContext(sparkContext) .seeds(Collections.singleton(new EntitySeed("1"))).view(new View.Builder().edge(EDGE_GROUP).build()) .build(); rddQuery.addOption(AbstractGetRDDHandler.HADOOP_CONFIGURATION_KEY, configurationString); rdd = graph1.execute(rddQuery, user); if (rdd == null) { fail("No RDD returned"); } results.clear(); results.addAll(rdd.collect()); expectedElements.clear(); expectedElements.add(edge1B); expectedElements.add(edge1C); assertEquals(expectedElements, results); // Check get correct edges for "1" and "5" Set<EntitySeed> seeds = new HashSet<>(); seeds.add(new EntitySeed("1")); seeds.add(new EntitySeed("5")); rddQuery = new GetJavaRDDOfElements.Builder<EntitySeed>().javaSparkContext(sparkContext).seeds(seeds) .build(); rddQuery.addOption(AbstractGetRDDHandler.HADOOP_CONFIGURATION_KEY, configurationString); rdd = graph1.execute(rddQuery, user); if (rdd == null) { fail("No RDD returned"); } results.clear(); results.addAll(rdd.collect()); final Entity entity5 = new Entity(ENTITY_GROUP); entity5.setVertex("5"); final Edge edge5B = new Edge(EDGE_GROUP); edge5B.setSource("5"); edge5B.setDestination("B"); edge5B.setDirected(false); edge5B.putProperty("count", 2); final Edge edge5C = new Edge(EDGE_GROUP); edge5C.setSource("5"); edge5C.setDestination("C"); edge5C.setDirected(false); edge5C.putProperty("count", 4); expectedElements.clear(); expectedElements.add(entity1); expectedElements.add(edge1B); expectedElements.add(edge1C); expectedElements.add(entity5); expectedElements.add(edge5B); expectedElements.add(edge5C); assertEquals(expectedElements, results); sparkContext.stop(); } @Test public void checkGetCorrectElementsInRDDForEdgeSeed() throws OperationException, IOException { final Graph graph1 = new Graph.Builder() .addSchema(getClass().getResourceAsStream("/schema/dataSchema.json")) .addSchema(getClass().getResourceAsStream("/schema/dataTypes.json")) .addSchema(getClass().getResourceAsStream("/schema/storeTypes.json")) .storeProperties(getClass().getResourceAsStream("/store.properties")).build(); final List<Element> elements = new ArrayList<>(); for (int i = 0; i < 10; i++) { final Entity entity = new Entity(ENTITY_GROUP); entity.setVertex("" + i); final Edge edge1 = new Edge(EDGE_GROUP); edge1.setSource("" + i); edge1.setDestination("B"); edge1.setDirected(false); edge1.putProperty("count", 2); final Edge edge2 = new Edge(EDGE_GROUP); edge2.setSource("" + i); edge2.setDestination("C"); edge2.setDirected(false); edge2.putProperty("count", 4); elements.add(edge1); elements.add(edge2); elements.add(entity); } final User user = new User(); graph1.execute(new AddElements(elements), user); final SparkConf sparkConf = new SparkConf().setMaster("local") .setAppName("testCheckGetCorrectElementsInJavaRDDForEdgeSeed") .set("spark.serializer", "org.apache.spark.serializer.KryoSerializer") .set("spark.kryo.registrator", "uk.gov.gchq.gaffer.spark.serialisation.kryo.Registrator") .set("spark.driver.allowMultipleContexts", "true"); final JavaSparkContext sparkContext = new JavaSparkContext(sparkConf); // Create Hadoop configuration and serialise to a string final Configuration configuration = new Configuration(); final ByteArrayOutputStream baos = new ByteArrayOutputStream(); configuration.write(new DataOutputStream(baos)); final String configurationString = new String(baos.toByteArray(), CommonConstants.UTF_8); // Check get correct edges for EdgeSeed 1 -> B GetJavaRDDOfElements<EdgeSeed> rddQuery = new GetJavaRDDOfElements.Builder<EdgeSeed>() .javaSparkContext(sparkContext).seeds(Collections.singleton(new EdgeSeed("1", "B", false))) .setIncludeEdges(GetOperation.IncludeEdgeType.ALL).setIncludeEntities(false).build(); rddQuery.addOption(AbstractGetRDDHandler.HADOOP_CONFIGURATION_KEY, configurationString); JavaRDD<Element> rdd = graph1.execute(rddQuery, user); if (rdd == null) { fail("No RDD returned"); } final Set<Element> results = new HashSet<>(); results.addAll(rdd.collect()); final Set<Element> expectedElements = new HashSet<>(); final Edge edge1B = new Edge(EDGE_GROUP); edge1B.setSource("1"); edge1B.setDestination("B"); edge1B.setDirected(false); edge1B.putProperty("count", 2); expectedElements.add(edge1B); assertEquals(expectedElements, results); // Check get entity for 1 when query for 1 -> B and specify entities only rddQuery = new GetJavaRDDOfElements.Builder<EdgeSeed>().javaSparkContext(sparkContext) .seeds(Collections.singleton(new EdgeSeed("1", "B", false))).setIncludeEntities(true) .setIncludeEdges(GetOperation.IncludeEdgeType.NONE).build(); rddQuery.addOption(AbstractGetRDDHandler.HADOOP_CONFIGURATION_KEY, configurationString); rdd = graph1.execute(rddQuery, user); if (rdd == null) { fail("No RDD returned"); } results.clear(); results.addAll(rdd.collect()); expectedElements.clear(); final Entity entity1 = new Entity(ENTITY_GROUP); entity1.setVertex("1"); expectedElements.add(entity1); assertEquals(expectedElements, results); // Check get correct edges for 1 -> B when specify edges only rddQuery = new GetJavaRDDOfElements.Builder<EdgeSeed>().javaSparkContext(sparkContext) .seeds(Collections.singleton(new EdgeSeed("1", "B", false))) .view(new View.Builder().edge(EDGE_GROUP).build()).setIncludeEntities(false) .setIncludeEdges(GetOperation.IncludeEdgeType.ALL).build(); rddQuery.addOption(AbstractGetRDDHandler.HADOOP_CONFIGURATION_KEY, configurationString); rdd = graph1.execute(rddQuery, user); if (rdd == null) { fail("No RDD returned"); } results.clear(); results.addAll(rdd.collect()); expectedElements.clear(); expectedElements.add(edge1B); assertEquals(expectedElements, results); // Check get correct edges for 1 -> B and 5 -> C Set<EdgeSeed> seeds = new HashSet<>(); seeds.add(new EdgeSeed("1", "B", false)); seeds.add(new EdgeSeed("5", "C", false)); rddQuery = new GetJavaRDDOfElements.Builder<EdgeSeed>().javaSparkContext(sparkContext) .setIncludeEntities(false).seeds(seeds).build(); rddQuery.addOption(AbstractGetRDDHandler.HADOOP_CONFIGURATION_KEY, configurationString); rdd = graph1.execute(rddQuery, user); if (rdd == null) { fail("No RDD returned"); } results.clear(); results.addAll(rdd.collect()); final Edge edge5C = new Edge(EDGE_GROUP); edge5C.setSource("5"); edge5C.setDestination("C"); edge5C.setDirected(false); edge5C.putProperty("count", 4); expectedElements.clear(); expectedElements.add(edge1B); expectedElements.add(edge5C); assertEquals(expectedElements, results); sparkContext.stop(); } }