Java tutorial
package uk.ac.ebi.spot.rdf.model.differential.microarray; import com.google.common.collect.Sets; import org.apache.commons.configuration.XMLConfiguration; import org.w3c.dom.Document; import uk.ac.ebi.spot.rdf.model.ExperimentConfiguration; import java.util.List; import java.util.SortedSet; /* * Copyright 2008-2013 Microarray Informatics Team, EMBL-European Bioinformatics Institute * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. * You may obtain a copy of the License at * * http://www.apache.org/licenses/LICENSE-2.0 * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. * * * For further details of the Gene Expression Atlas project, including source code, * downloads and documentation, please see: * * http://gxa.github.com/gxa */ public class MicroarrayExperimentConfiguration extends ExperimentConfiguration { private SortedSet<String> arrayDesignAccessions; public MicroarrayExperimentConfiguration(XMLConfiguration xmlConfiguration, Document document) { super(xmlConfiguration, document); this.arrayDesignAccessions = Sets.newTreeSet((List) xmlConfiguration.getList("analytics/array_design")); } public SortedSet<String> getArrayDesignAccessions() { return arrayDesignAccessions; } }