org.spdx.spdxspreadsheet.ExternalRefsSheet.java Source code

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Here is the source code for org.spdx.spdxspreadsheet.ExternalRefsSheet.java

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/**
 * Copyright (c) 2016 Source Auditor Inc.
 *
 *   Licensed under the Apache License, Version 2.0 (the "License");
 *   you may not use this file except in compliance with the License.
 *   You may obtain a copy of the License at
 *
 *       http://www.apache.org/licenses/LICENSE-2.0
 *
 *   Unless required by applicable law or agreed to in writing, software
 *   distributed under the License is distributed on an "AS IS" BASIS,
 *   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *   See the License for the specific language governing permissions and
 *   limitations under the License.
 *
*/
package org.spdx.spdxspreadsheet;

import java.net.URI;
import java.net.URISyntaxException;
import java.util.List;

import org.apache.poi.ss.usermodel.Cell;
import org.apache.poi.ss.usermodel.CellStyle;
import org.apache.poi.ss.usermodel.Row;
import org.apache.poi.ss.usermodel.Sheet;
import org.apache.poi.ss.usermodel.Workbook;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.spdx.rdfparser.InvalidSPDXAnalysisException;
import org.spdx.rdfparser.SpdxDocumentContainer;
import org.spdx.rdfparser.model.ExternalRef;
import org.spdx.rdfparser.model.ExternalRef.ReferenceCategory;
import org.spdx.rdfparser.referencetype.ListedReferenceTypes;
import org.spdx.rdfparser.referencetype.ReferenceType;

import com.google.common.collect.Lists;

/**
 * Package external refs
 * @author Gary O'Neall
 *
 */
public class ExternalRefsSheet extends AbstractSheet {

    static final Logger logger = LoggerFactory.getLogger(ExternalRefsSheet.class);

    static final int PKG_ID_COL = 0;
    static final int REF_CATEGORY_COL = PKG_ID_COL + 1;
    static final int REF_TYPE_COL = REF_CATEGORY_COL + 1;
    static final int REF_LOCATOR_COL = REF_TYPE_COL + 1;
    static final int COMMENT_COL = REF_LOCATOR_COL + 1;

    static final int USER_DEFINED_COLS = COMMENT_COL + 1;
    static final int NUM_COLS = USER_DEFINED_COLS + 1;

    static final boolean[] REQUIRED = new boolean[] { true, true, true, true, false, false };
    static final String[] HEADER_TITLES = new String[] { "Package ID", "Category", "Type", "Locator", "Comment",
            "User Defined ..." };
    static final int[] COLUMN_WIDTHS = new int[] { 25, 25, 40, 60, 40, 40 };
    static final boolean[] LEFT_WRAP = new boolean[] { false, false, true, true, true, true };
    static final boolean[] CENTER_NOWRAP = new boolean[] { true, true, false, false, false, false };

    /**
     * @param workbook
     * @param sheetName
     */
    public ExternalRefsSheet(Workbook workbook, String sheetName) {
        super(workbook, sheetName);
    }

    /* (non-Javadoc)
     * @see org.spdx.spdxspreadsheet.AbstractSheet#verify()
     */
    @Override
    public String verify() {
        try {
            if (sheet == null) {
                return "Worksheet for External Refs does not exist";
            }
            Row firstRow = sheet.getRow(firstRowNum);
            for (int i = 0; i < NUM_COLS - 1; i++) { // Don't check the last (user defined) column
                Cell cell = firstRow.getCell(i + firstCellNum);
                if (cell == null || cell.getStringCellValue() == null
                        || !cell.getStringCellValue().equals(HEADER_TITLES[i])) {
                    return "Column " + HEADER_TITLES[i] + " missing for External Refs worksheet";
                }
            }
            // validate rows
            boolean done = false;
            int rowNum = getFirstDataRow();
            while (!done) {
                Row row = sheet.getRow(rowNum);
                if (row == null || row.getCell(firstCellNum) == null) {
                    done = true;
                } else {
                    String error = validateRow(row);
                    if (error != null) {
                        return error;
                    }
                    rowNum++;
                }
            }
            return null;
        } catch (Exception ex) {
            return "Error in verifying External Refs work sheet: " + ex.getMessage();
        }
    }

    /**
     * @param row
     * @return
     */
    private String validateRow(Row row) {
        for (int i = 0; i < NUM_COLS; i++) {
            Cell cell = row.getCell(i);
            if (cell == null) {
                if (REQUIRED[i]) {
                    return "Required cell " + HEADER_TITLES[i] + " missing for row "
                            + String.valueOf(row.getRowNum());
                }
            }
        }
        return null;
    }

    /**
     * @param wb
     * @param externalRefsSheetName
     */
    public static void create(Workbook wb, String externalRefsSheetName) {
        int sheetNum = wb.getSheetIndex(externalRefsSheetName);
        if (sheetNum >= 0) {
            wb.removeSheetAt(sheetNum);
        }
        Sheet sheet = wb.createSheet(externalRefsSheetName);
        CellStyle headerStyle = AbstractSheet.createHeaderStyle(wb);
        CellStyle centerStyle = AbstractSheet.createCenterStyle(wb);
        CellStyle wrapStyle = AbstractSheet.createLeftWrapStyle(wb);
        Row row = sheet.createRow(0);
        for (int i = 0; i < HEADER_TITLES.length; i++) {
            sheet.setColumnWidth(i, COLUMN_WIDTHS[i] * 256);
            if (LEFT_WRAP[i]) {
                sheet.setDefaultColumnStyle(i, wrapStyle);
            } else if (CENTER_NOWRAP[i]) {
                sheet.setDefaultColumnStyle(i, centerStyle);
            }
            Cell cell = row.createCell(i);
            cell.setCellStyle(headerStyle);
            cell.setCellValue(HEADER_TITLES[i]);
        }
    }

    /**
     * @param packageId Package ID for the package that contains this external ref
     * @param externalRef
     * @param container 
     * @throws SpreadsheetException 
     */
    public void add(String packageId, ExternalRef externalRef, SpdxDocumentContainer container)
            throws SpreadsheetException {
        Row row = addRow();
        if (packageId != null) {
            row.createCell(PKG_ID_COL).setCellValue(packageId);
        }
        if (externalRef != null) {
            if (externalRef.getReferenceCategory() != null) {
                row.createCell(REF_CATEGORY_COL).setCellValue(externalRef.getReferenceCategory().getTag());
            }
            try {
                if (externalRef.getReferenceType() != null) {
                    row.createCell(REF_TYPE_COL)
                            .setCellValue(refTypeToString(externalRef.getReferenceType(), container));
                }
            } catch (InvalidSPDXAnalysisException e) {
                throw (new SpreadsheetException("Error getting external reference type: " + e.getMessage()));
            }
            if (externalRef.getReferenceLocator() != null) {
                row.createCell(REF_LOCATOR_COL).setCellValue(externalRef.getReferenceLocator());
            }
            if (externalRef.getComment() != null) {
                row.createCell(COMMENT_COL).setCellValue(externalRef.getComment());
            }
        }
    }

    /**
     * Convert a reference type to the type used in 
     * @param referenceType
     * @return
     * @throws InvalidSPDXAnalysisException 
     */
    protected static String refTypeToString(ReferenceType referenceType, SpdxDocumentContainer container) {
        String retval;
        if (referenceType == null) {
            return "[No Reference Type]";
        }
        URI referenceTypeUri = referenceType.getReferenceTypeUri();
        if (referenceTypeUri == null) {
            return "[No Reference Type]";
        }
        try {
            retval = ListedReferenceTypes.getListedReferenceTypes().getListedReferenceName(referenceTypeUri);
        } catch (InvalidSPDXAnalysisException e) {
            retval = null;
        }
        if (retval == null) {
            retval = referenceTypeUri.toString();
            if (retval.startsWith(container.getDocumentNamespace())) {
                retval = retval.substring(container.getDocumentNamespace().length());
            }
        }
        return retval;
    }

    /**
     * Get all external references for a given package ID
     * @param id
     * @param container
     * @return
     */
    public ExternalRef[] getExternalRefsForPkgid(String id, SpdxDocumentContainer container) {
        if (id == null || sheet == null) {
            return new ExternalRef[0];
        }
        List<ExternalRef> retval = Lists.newArrayList();
        int i = getFirstDataRow();
        Row row = sheet.getRow(i++);
        while (row != null) {
            Cell pkgIdCell = row.getCell(PKG_ID_COL);
            if (pkgIdCell != null && id.equals(pkgIdCell.getStringCellValue())) {
                ReferenceCategory refCategory = null;
                Cell refCategoryCell = row.getCell(REF_CATEGORY_COL);
                if (refCategoryCell != null) {
                    refCategory = ReferenceCategory.fromTag(refCategoryCell.getStringCellValue());
                }

                Cell refTypeCell = row.getCell(REF_TYPE_COL);
                ReferenceType refType = null;
                if (refTypeCell != null) {
                    String refTypeStr = refTypeCell.getStringCellValue();
                    refType = stringToRefType(refTypeStr, container);
                }

                Cell refLocatorCell = row.getCell(REF_LOCATOR_COL);
                String refLocator = null;
                if (refLocatorCell != null) {
                    refLocator = refLocatorCell.getStringCellValue();
                }

                Cell commentCell = row.getCell(COMMENT_COL);
                String comment = null;
                if (commentCell != null) {
                    comment = commentCell.getStringCellValue();
                }

                retval.add(new ExternalRef(refCategory, refType, refLocator, comment));
            }
            row = sheet.getRow(i++);
        }
        return retval.toArray(new ExternalRef[retval.size()]);
    }

    /**
     * Convert a string to a reference type
     * @param refTypeStr can be a listed reference type name, a URI string, or a local name
     * @param container
     * @return
     */
    protected static ReferenceType stringToRefType(String refTypeStr, SpdxDocumentContainer container) {
        ReferenceType refType = null;
        if (refTypeStr != null) {
            refTypeStr = refTypeStr.trim();
            try {
                refType = ListedReferenceTypes.getListedReferenceTypes()
                        .getListedReferenceTypeByName(refTypeStr.trim());
            } catch (InvalidSPDXAnalysisException e) {
                // Ignore - likely due to not being a listed reference type
            }
            if (refType == null) {
                if (!(refTypeStr.contains(":") || refTypeStr.contains("/"))) {
                    refTypeStr = container.getDocumentNamespace() + refTypeStr;
                }
                try {
                    refType = new ReferenceType(new URI(refTypeStr), null, null, null);
                } catch (InvalidSPDXAnalysisException e) {
                    logger.warn("SPDX Exception creating reference type", e);
                } catch (URISyntaxException e) {
                    logger.warn("Invalid URI for reference type: " + refTypeStr);
                }
            }
        }
        return refType;
    }
}