Java tutorial
/** * The contents of this file are subject to the OpenMRS Public License * Version 1.0 (the "License"); you may not use this file except in * compliance with the License. You may obtain a copy of the License at * http://license.openmrs.org * * Software distributed under the License is distributed on an "AS IS" * basis, WITHOUT WARRANTY OF ANY KIND, either express or implied. See the * License for the specific language governing rights and limitations * under the License. * * Copyright (C) OpenMRS, LLC. All Rights Reserved. */ package org.openmrs.module.kenyaemr.calculation.library.mchms; import org.junit.Assert; import org.junit.Before; import org.junit.Test; import org.openmrs.Concept; import org.openmrs.EncounterType; import org.openmrs.Form; import org.openmrs.Obs; import org.openmrs.Program; import org.openmrs.api.context.Context; import org.openmrs.calculation.patient.PatientCalculationService; import org.openmrs.calculation.result.CalculationResultMap; import org.openmrs.module.metadatadeploy.MetadataUtils; import org.openmrs.module.kenyacore.test.TestUtils; import org.openmrs.module.kenyaemr.Dictionary; import org.openmrs.module.kenyaemr.metadata.CommonMetadata; import org.openmrs.module.kenyaemr.metadata.MchMetadata; import org.openmrs.test.BaseModuleContextSensitiveTest; import org.springframework.beans.factory.annotation.Autowired; import java.util.Arrays; import java.util.Calendar; import java.util.Date; import java.util.List; /** * Tests for {@link NotOnArtCalculation} */ public class NotOnArtCalculationTest extends BaseModuleContextSensitiveTest { @Autowired private CommonMetadata commonMetadata; @Autowired private MchMetadata mchMetadata; /** * Setup each test */ @Before public void setup() throws Exception { executeDataSet("dataset/test-concepts.xml"); commonMetadata.install(); mchMetadata.install(); } /** * @see NotOnArtCalculation#evaluate(java.util.Collection, java.util.Map, org.openmrs.calculation.patient.PatientCalculationContext) * @verifies determine whether MCH-MS patients have been tested for HIV */ @Test public void evaluate_shouldDetermineWhetherPatientsAreNotOnArt() throws Exception { // Get the MCH-MS program, enrollment encounter type and enrollment form Program mchmsProgram = MetadataUtils.existing(Program.class, MchMetadata._Program.MCHMS); EncounterType enrollmentEncounterType = MetadataUtils.existing(EncounterType.class, MchMetadata._EncounterType.MCHMS_ENROLLMENT); Form enrollmentForm = MetadataUtils.existing(Form.class, MchMetadata._Form.MCHMS_ENROLLMENT); //Enroll #2, #6, #7 and #8 into MCH-MS TestUtils.enrollInProgram(TestUtils.getPatient(2), mchmsProgram, new Date()); for (int i = 6; i <= 8; i++) { TestUtils.enrollInProgram(TestUtils.getPatient(i), mchmsProgram, new Date()); } //Get the HIV Status concept, the LMP concept and the ART use in Pregnanacy concepts Concept hivStatus = Dictionary.getConcept(Dictionary.HIV_STATUS); Concept lmp = Dictionary.getConcept(Dictionary.LAST_MONTHLY_PERIOD); Concept artUse = Dictionary.getConcept(Dictionary.ANTIRETROVIRAL_USE_IN_PREGNANCY); //Prepare times since last LMP (10 weeks ago and 20 weeks ago) Calendar tenWeeksAgo = Calendar.getInstance(); tenWeeksAgo.add(Calendar.DATE, -70); Calendar twentyWeeksAgo = Calendar.getInstance(); twentyWeeksAgo.add(Calendar.DATE, -140); //Create enrollment encounter for Pat#2 indicating HIV status - and LMP 20 weeks ago Obs[] encounterObss2 = { TestUtils.saveObs(TestUtils.getPatient(2), hivStatus, Dictionary.getConcept(Dictionary.NEGATIVE), new Date()), TestUtils.saveObs(TestUtils.getPatient(2), lmp, twentyWeeksAgo.getTime(), new Date()) }; TestUtils.saveEncounter(TestUtils.getPatient(2), enrollmentEncounterType, enrollmentForm, new Date(), encounterObss2); //Create ART use in Pregnancy obs for Pat#2 indicating NOT_APPLICABLE TestUtils.saveObs(TestUtils.getPatient(2), artUse, Dictionary.getConcept(Dictionary.NOT_APPLICABLE), new Date()); //Create enrollment encounter for Pat#6 indicating HIV status + and LMP 10 weeks ago Obs[] encounterObss6 = { TestUtils.saveObs(TestUtils.getPatient(6), hivStatus, Dictionary.getConcept(Dictionary.POSITIVE), new Date()), TestUtils.saveObs(TestUtils.getPatient(6), lmp, tenWeeksAgo.getTime(), new Date()) }; TestUtils.saveEncounter(TestUtils.getPatient(6), enrollmentEncounterType, enrollmentForm, new Date(), encounterObss6); //Create ART use in Pregnancy obs for Pat#6 indicating NOT_APPLICABLE TestUtils.saveObs(TestUtils.getPatient(6), artUse, Dictionary.getConcept(Dictionary.NOT_APPLICABLE), new Date()); //Create enrollment encounter for Pat#7 indicating HIV status + and LMP 20 weeks ago Obs[] encounterObss7 = { TestUtils.saveObs(TestUtils.getPatient(7), hivStatus, Dictionary.getConcept(Dictionary.POSITIVE), new Date()), TestUtils.saveObs(TestUtils.getPatient(7), lmp, twentyWeeksAgo.getTime(), new Date()) }; TestUtils.saveEncounter(TestUtils.getPatient(7), enrollmentEncounterType, enrollmentForm, new Date(), encounterObss7); //Create ART use in Pregnancy obs for Pat#8 indicating NOT_APPLICABLE TestUtils.saveObs(TestUtils.getPatient(7), artUse, Dictionary.getConcept(Dictionary.NOT_APPLICABLE), new Date()); //Create enroollment encounter for Pat#8 indicating HIV status + and LMP 20 weeks ago Obs[] encounterObss8 = { TestUtils.saveObs(TestUtils.getPatient(8), hivStatus, Dictionary.getConcept(Dictionary.POSITIVE), new Date()), TestUtils.saveObs(TestUtils.getPatient(8), lmp, twentyWeeksAgo.getTime(), new Date()) }; TestUtils.saveEncounter(TestUtils.getPatient(8), enrollmentEncounterType, enrollmentForm, new Date(), encounterObss8); //Create ART use in Pregnancy obs for Pat#8 indicating MOTHER_ON_PROPHYLAXIS TestUtils.saveObs(TestUtils.getPatient(8), artUse, Dictionary.getConcept(Dictionary.MOTHER_ON_PROPHYLAXIS), new Date()); Context.flushSession(); List<Integer> ptIds = Arrays.asList(2, 6, 7, 8); //Run NotOnArtCalculation with these test patients CalculationResultMap resultMap = Context.getService(PatientCalculationService.class).evaluate(ptIds, new NotOnArtCalculation()); Assert.assertFalse((Boolean) resultMap.get(2).getValue()); //Not HIV+ - need not be on ART Assert.assertFalse((Boolean) resultMap.get(6).getValue()); //HIV+ and not on ART but gestation less than 14 weeks - need not be on ART Assert.assertTrue((Boolean) resultMap.get(7).getValue()); //HIV+ and not on ART and gestation is greater than 14 weeks - needs to be on ART Assert.assertFalse((Boolean) resultMap.get(8).getValue()); //HIV+ and on ART and gestation is greater than 14 weeks - need not to be on ART } /** * @see NotOnArtCalculation#evaluate(java.util.Collection, java.util.Map, org.openmrs.calculation.patient.PatientCalculationContext) * @verifies determine whether MCH-MS patients have been tested for HIV */ @Test public void evaluate2_shouldDetermineWhetherPatientsAreNotOnArt() throws Exception { List<Integer> ptIds = Arrays.asList(2, 999); CalculationResultMap resultMap = Context.getService(PatientCalculationService.class).evaluate(ptIds, new NotOnArtCalculation()); Assert.assertFalse((Boolean) resultMap.get(2).getValue()); // Not in MCH-MS Program - need not be on ART Assert.assertFalse((Boolean) resultMap.get(999).getValue()); // Voided patient } }