org.obiba.onyx.core.domain.participant.ParticipantAttributeReaderTest.java Source code

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Here is the source code for org.obiba.onyx.core.domain.participant.ParticipantAttributeReaderTest.java

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/*******************************************************************************
 * Copyright 2008(c) The OBiBa Consortium. All rights reserved.
 * 
 * This program and the accompanying materials
 * are made available under the terms of the GNU Public License v3.0.
 * 
 * You should have received a copy of the GNU General Public License
 * along with this program.  If not, see <http://www.gnu.org/licenses/>.
 ******************************************************************************/
package org.obiba.onyx.core.domain.participant;

import java.io.IOException;
import java.util.List;

import junit.framework.Assert;

import org.junit.Before;
import org.junit.Test;
import org.obiba.onyx.core.etl.participant.impl.ParticipantReaderTest;
import org.springframework.core.io.ClassPathResource;
import org.springframework.core.io.Resource;

/**
 * Tests reading and and flattening a participant attribute xml file.
 */
public class ParticipantAttributeReaderTest {
    private static final String TEST_RESOURCES_DIR = ParticipantAttributeReaderTest.class.getSimpleName();

    private List<ParticipantAttribute> participantAttributes;

    @Before
    public void setUp() throws Exception {
        participantAttributes = getParticipantAttributes();
    }

    @Test
    public void testSizeOfAttributeList() {
        Assert.assertEquals(6, participantAttributes.size());
    }

    @Test
    public void testGroupExistsForEveryAttribute() {
        for (ParticipantAttribute participantAttribute : participantAttributes) {
            Assert.assertNotNull("Group is null.", participantAttribute.getGroup());
        }
    }

    @Test
    public void testThatDefaultEmptyGroupExists() {
        for (ParticipantAttribute participantAttribute : participantAttributes) {
            if (participantAttribute.getGroup().getName().equals(Group.DEFAULT_GROUP_NAME)) {
                Assert.assertTrue(true);
                return;
            }
        }
        Assert.assertFalse("At least one group was not a default group.", true);
    }

    @Test
    public void testAttributesInSameOrderAsXmlFile() {
        Assert.assertEquals("Doctor First Name", participantAttributes.get(0).getName());
        Assert.assertEquals("Doctor Last Name", participantAttributes.get(1).getName());
        Assert.assertEquals("Special Needs", participantAttributes.get(2).getName());
        Assert.assertEquals("Family Member First Name", participantAttributes.get(3).getName());
        Assert.assertEquals("Family Member Last Name", participantAttributes.get(4).getName());
        Assert.assertEquals("Marital Status", participantAttributes.get(5).getName());
    }

    @Test
    public void testDefaultGroupContainsAllDefaultAttributes() {
        List<ParticipantAttribute> defaultGroupAttributes = participantAttributes.get(2).getGroup()
                .getParticipantAttributes();
        Assert.assertEquals(2, defaultGroupAttributes.size());
        Assert.assertEquals("Special Needs", defaultGroupAttributes.get(0).getName());
        Assert.assertEquals("Marital Status", defaultGroupAttributes.get(1).getName());
    }

    @Test
    public void testAttributesInFamilyMemberGroupAreContiguous() {
        List<ParticipantAttribute> familyMemberGroupAttributes = participantAttributes.get(3).getGroup()
                .getParticipantAttributes();
        Assert.assertEquals(2, familyMemberGroupAttributes.size());
        Assert.assertEquals(participantAttributes.get(3), familyMemberGroupAttributes.get(0));
        Assert.assertEquals(participantAttributes.get(4), familyMemberGroupAttributes.get(1));
    }

    @Test
    public void testAttributesInDoctorGroupAreContiguous() {
        List<ParticipantAttribute> doctorGroupAttributes = participantAttributes.get(0).getGroup()
                .getParticipantAttributes();
        Assert.assertEquals(2, doctorGroupAttributes.size());
        Assert.assertEquals(participantAttributes.get(0), doctorGroupAttributes.get(0));
        Assert.assertEquals(participantAttributes.get(1), doctorGroupAttributes.get(1));
    }

    @Test
    public void testOldXmlFileWithoutGroups() throws IOException {
        String oldXmlFileDirectory = ParticipantReaderTest.class.getSimpleName();
        ParticipantAttributeReader attributeReader = new ParticipantAttributeReader();
        attributeReader.setResources(
                new Resource[] { new ClassPathResource(oldXmlFileDirectory + "/configured-attributes.xml") });
        List<ParticipantAttribute> participantAttributes = attributeReader.read();

        Group defaultGroup = participantAttributes.get(0).getGroup();
        int numberOfAttributesInDefaultGroup = defaultGroup.getParticipantAttributes().size();

        Assert.assertEquals("Expect all attributes to be part of the default group.", Group.DEFAULT_GROUP_NAME,
                defaultGroup.getName());
        Assert.assertEquals(participantAttributes.size(), numberOfAttributesInDefaultGroup);
    }

    private List<ParticipantAttribute> getParticipantAttributes() throws IOException {
        ParticipantAttributeReader attributeReader = new ParticipantAttributeReader();

        attributeReader.setResources(
                new Resource[] { new ClassPathResource(TEST_RESOURCES_DIR + "/participant-attributes.xml") });

        return attributeReader.read();
    }
}