org.dbpedia.spotlight.lucene.index.external.SSEResidualKnowledgeBaseBuilder.java Source code

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/**
 * SSE - A Knowledge Discovery Application
 *
 * Copyright (C) 2014 Federico Cairo, Giuseppe Futia, Federico Benedetto
 *
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU Affero General Public License as
 * published by the Free Software Foundation, either version 3 of the
 * License, or (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
 * GNU Affero General Public License for more details.
 *
 * You should have received a copy of the GNU Affero General Public License
 * along with this program. If not, see <http://www.gnu.org/licenses/>.
 */

package org.dbpedia.spotlight.lucene.index.external;

import org.apache.commons.compress.compressors.CompressorException;
import org.apache.commons.compress.compressors.bzip2.BZip2CompressorInputStream;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.lucene.analysis.Analyzer;
import org.apache.lucene.analysis.standard.StandardAnalyzer;
import org.apache.lucene.document.Document;
import org.apache.lucene.document.Field;
import org.apache.lucene.index.IndexReader;
import org.apache.lucene.index.IndexWriter;
import org.apache.lucene.index.Term;
import org.apache.lucene.search.IndexSearcher;
import org.apache.lucene.search.Query;
import org.apache.lucene.search.TermQuery;
import org.apache.lucene.search.TopDocs;
import org.apache.lucene.store.Directory;
import org.apache.lucene.store.FSDirectory;
import org.apache.lucene.util.Version;
import org.dbpedia.spotlight.exceptions.ConfigurationException;
import java.io.*;
import java.util.*;

public class SSEResidualKnowledgeBaseBuilder {
    final static Log LOG = LogFactory.getLog(SSEResidualKnowledgeBaseBuilder.class);

    private IndexReader reader;
    private IndexWriter writer;
    private String language;

    public int countLines(String fileName) throws IOException, CompressorException {
        String line;
        int lineCount = 0;
        BufferedReader br = getBufferedReaderForBZ2File(fileName);
        while ((line = br.readLine()) != null) {
            lineCount++;
        }
        br.close();
        return lineCount;
    }

    public String cleanUri(String s) {
        if (language == "English")
            return s.replace("<http://dbpedia.org/resource/", "").replace(">", "").trim();
        else
            return s.replace("<http://it.dbpedia.org/resource/", "").replace(">", "").trim();
    }

    public ArrayList<String> cleanUriList(ArrayList<String> list) {
        ArrayList<String> result = new ArrayList<String>();
        for (String s : list) {
            result.add(cleanUri(s));
        }
        return result;
    }

    public void addADocument(String uri, String wikilinks) throws IOException, ConfigurationException {
        Document doc = new Document();
        Field uriField = new Field("URI", uri, Field.Store.YES, Field.Index.NOT_ANALYZED);
        doc.add(uriField);
        Field kbField = new Field("KB", wikilinks, Field.Store.YES, Field.Index.NOT_ANALYZED);
        doc.add(kbField);
        writer.addDocument(doc);
    }

    public void deleteFieldFromIndex(String fieldName, int docId, Analyzer analyzer)
            throws IOException, ConfigurationException {
        Document doc = reader.document(docId);
        doc.removeFields(fieldName);
        Field uri = doc.getField("URI");
        Term term = new Term("URI", uri.stringValue());
        writer.updateDocument(term, doc, analyzer);
    }

    public LinkedHashMap sortHashMap(HashMap passedMap) {
        List mapKeys = new ArrayList(passedMap.keySet());
        List mapValues = new ArrayList(passedMap.values());
        Collections.sort(mapValues);
        Collections.reverse(mapValues);
        Collections.sort(mapKeys);

        LinkedHashMap sortedMap = new LinkedHashMap();

        Iterator valueIt = mapValues.iterator();
        while (valueIt.hasNext()) {
            Object val = valueIt.next();
            Iterator keyIt = mapKeys.iterator();

            while (keyIt.hasNext()) {
                Object key = keyIt.next();
                String comp1 = passedMap.get(key).toString();
                String comp2 = val.toString();

                if (comp1.equals(comp2)) {
                    passedMap.remove(key);
                    mapKeys.remove(key);
                    sortedMap.put((String) key, (Integer) val);
                    break;
                }
            }
        }
        return sortedMap;
    }

    public String filterWikiList(ArrayList<String> wikilinks) throws IOException {
        ArrayList<String> cleanedWikilinks = cleanUriList(wikilinks);
        ArrayList<String> newArray = new ArrayList<String>();
        for (String wiki : cleanedWikilinks) {
            if (!wiki.startsWith("Category:") && !wiki.startsWith("Rue:") && !wiki.startsWith("File:")
                    && !wiki.startsWith("Portal:") && !wiki.startsWith("Template:")) {
                newArray.add(wiki);
            }
        }
        StringBuilder sb = new StringBuilder();
        for (String wikilinkUri : newArray) {
            sb.append(wikilinkUri + " ");
        }
        return sb.toString();
    }

    public static BufferedReader getBufferedReaderForBZ2File(String fileIn)
            throws IOException, CompressorException {
        FileInputStream fin = new FileInputStream(fileIn);
        BZip2CompressorInputStream input = new BZip2CompressorInputStream(fin, true);
        BufferedReader br2 = new BufferedReader(new InputStreamReader(input));
        return br2;
    }

    public static void main(String[] args) throws IOException, ConfigurationException, CompressorException {
        long start = System.currentTimeMillis();
        SSEResidualKnowledgeBaseBuilder kbb = new SSEResidualKnowledgeBaseBuilder();

        Properties config = new Properties();
        String confFile = args[0];
        config.load(new FileInputStream(new File(confFile)));
        // add this properties to indexing.properties
        String sseResidualKBPath = config.getProperty("sse.residualkb", "").trim();
        String wikilinksFilePath = config.getProperty("sse.wikilinks", "").trim();

        //older implmentation of IndexWriter
        //kbb.writer = new IndexWriter(residualKBPath, new StandardAnalyzer(), true);

        StandardAnalyzer sa = new StandardAnalyzer(Version.LUCENE_36);
        Directory directory = FSDirectory.open(new File(sseResidualKBPath));
        kbb.writer = new IndexWriter(directory, sa, true, new IndexWriter.MaxFieldLength(25000));

        int numLines = kbb.countLines(wikilinksFilePath);
        BufferedReader bufferedReader = getBufferedReaderForBZ2File(wikilinksFilePath);
        String line = bufferedReader.readLine();
        LOG.info("Ignore the first line: " + line);
        line = bufferedReader.readLine();
        String uriPresent = line.split(" ")[0];
        String uriPast = uriPresent;
        ArrayList<String> wikilinks = new ArrayList<String>();
        for (int i = 1; i < numLines; i++) {
            if (i != numLines - 1) {
                if ((uriPresent.equals(uriPast))) {
                    wikilinks.add(line.split(" ")[2]);
                } else {
                    String mergedWikilist = kbb.filterWikiList(wikilinks);
                    kbb.addADocument(kbb.cleanUri(uriPast), mergedWikilist);
                    wikilinks = new ArrayList<String>();
                    wikilinks.add(line.split(" ")[2]);
                }
                line = bufferedReader.readLine();
                uriPast = uriPresent;
                uriPresent = line.split(" ")[0];
            } else {
                wikilinks.add(line.split(" ")[2]);
                String mergedWikilist = kbb.filterWikiList(wikilinks);
                kbb.addADocument(kbb.cleanUri(uriPast), mergedWikilist);
            }
        }
        bufferedReader.close();
        kbb.writer.close();
        long stop = System.currentTimeMillis();
        long time = (stop - start) / (60 * 1000);
        System.out.println("Time elapsed: " + time + " minutes.");
    }
}