Java tutorial
/** * ************************************************************************ * Copyright (c) 2011: Istituto Nazionale di Fisica Nucleare (INFN), Italy * Consorzio COMETA (COMETA), Italy * * See http://www.infn.it and and http://www.consorzio-cometa.it for details on * the copyright holders. * * Licensed under the Apache License, Version 2.0 (the "License"); you may not * use this file except in compliance with the License. You may obtain a copy of * the License at * * http://www.apache.org/licenses/LICENSE-2.0 * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, WITHOUT * WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the * License for the specific language governing permissions and limitations under * the License. * * @author <a href="mailto:riccardo.bruno@ct.infn.it">Riccardo Bruno</a>(COMETA) * ************************************************************************** */ package it.infn.ct; // Import generic java libraries import java.io.*; import java.net.*; import java.util.Enumeration; import java.util.HashMap; import java.util.Iterator; import java.util.LinkedList; import java.util.List; import java.util.Calendar; import java.util.Map; import java.text.DateFormat; import java.text.SimpleDateFormat; // Importing portlet libraries import javax.portlet.*; // Importing liferay libraries import com.liferay.portal.kernel.util.WebKeys; import com.liferay.portal.theme.ThemeDisplay; import com.liferay.portal.model.User; // Importing Apache libraries import org.apache.commons.fileupload.*; import org.apache.commons.fileupload.disk.DiskFileItemFactory; import org.apache.commons.fileupload.portlet.PortletFileUpload; // Importing GridEngine Job libraries import it.infn.ct.GridEngine.Job.*; import it.infn.ct.GridEngine.JobCollection.JobCollection; import it.infn.ct.GridEngine.JobCollection.JobCollectionSubmission; import it.infn.ct.GridEngine.JobCollection.JobParametric; import it.infn.ct.GridEngine.JobCollection.WorkflowN1; import it.infn.ct.GridEngine.JobResubmission.GEJobDescription; import it.infn.ct.GridEngine.UsersTracking.ActiveInteractions; import it.infn.ct.GridEngine.UsersTracking.UsersTrackingDBInterface; import java.util.ArrayList; import org.apache.commons.lang.StringUtils; /** * This is the class that overrides the GenericPortlet class methods You can * create your own application just customizing this code skeleton This code * provides mainly a full working example on: 1) How to manage user interaction * managing the Actions/View combination 2) How to manage portlet preferences * and help pane 3) How to print application information using the Log object 4) * How to execute a collection of job on a distributed infrastructure with * GridEngine * * @author <a href="mailto:riccardo.bruno@ct.infn.it">Riccardo Bruno</a>(COMETA) */ public class molon_portlet extends GenericPortlet { // Instantiate the logger object AppLogger _log = new AppLogger(molon_portlet.class); // This portlet uses Aciont/Views enumerations in order to // manage the different portlet modes and the corresponding // view to display // You may override the current values with your own business // logic best identifiers and manage them through: jsp pages and // this java code // The jsp parameter PortletStatus will be the responsible of // portlet mode switching. This parameter will be read by // the processAction method (actionRequest) who will select // then the proper view mode. The doView method will read this // value (renderResponSe) assigning the correct view mode. // // At first boot the application will be in ACTIVATE status // that means the application still requires to be registered // into the GridEngine' UsersTrackingDB' GridOperations table // Once registered the defaul view mode will be the VIEW_INPUT /** * Actions enumeration contains the possible action status mode managed by * the application. Action modes are stored into the 'PortletStatus' * parameter inside the actionRequest object */ private enum Actions { ACTION_ACTIVATE // User (Admin) activated the portlet , ACTION_INPUT // User asked to submit a job , ACTION_SUBMIT // User asked to rerutn to the input form , ACTION_PILOT // The user did something in the edit pilot screen pane , ACTION_POSTPROCESS } /** * Views enumeration contains the possible view mondes managed b the * application. View modes are stored into the parameter 'PortletStatus' * inside the renderResponse object */ private enum Views { VIEW_ACTIVATE // Show acrivation pane (called 1st time only) , VIEW_INPUT // View containing application input fields , VIEW_SUBMIT // View reporting the job submission , VIEW_PILOT // Shows the pilot script and makes it editable } /** * Instanciate the AppPreferences object that stores the Application * preferences * * @see AppPreferences */ AppPreferences appPreferences = new AppPreferences(_log); AppPreferences appInitPreferences = new AppPreferences(_log); /** * This class contains all the necessary data to submit a job inside a * distributed infrastructure. Each submission will instanciate this object */ class AppInput { // Applicatoin inputs // String inputFileName; // Filename for application input file // String inputFileText; // Text for application input file String jobIdentifier; // User' given job identifier // Each inputSandobox file must be declared below // This variable contains the content of an uploaded file // String inputSandbox_inputFile; // Some user level information // must be stored as well String username; String timestamp; String collectionType; String inputFile; String jobPID; String inputURL; String path; String userEmail; String finalJobExecutable; String finalJobArgument; /** * Standard constructor just initialize empty values */ public AppInput() { // inputFileName = // inputFileText = // inputSandbox_inputFile = jobIdentifier = username = timestamp = collectionType = userEmail = finalJobArgument = finalJobExecutable = inputFile = jobPID = inputURL = ""; Calendar cal = Calendar.getInstance(); DateFormat df = new SimpleDateFormat("yyyy-MM-dd-HH:mm:ss"); String dateStr = df.format(cal.getTime()); path = "/tmp/molon2_executions_" + dateStr; File f = new File(path); try { if (f.mkdir()) { System.out.println("Directory Created: " + path); } else { System.out.println("Directory is not created: " + path); } } catch (Exception e) { e.printStackTrace(); } } } // AppInput // Liferay portal data // Classes below are used by this portlet code to get information // about the current user public String portalName = "localhost"; // Name of the hosting portal public String appServerPath; // This variable stores the absolute path of the Web applications // Other misc valuse // (!) Pay attention that altough the use of the LS variable // the replaceAll("\n","") has to be used public static final String LS = System.getProperty("line.separator"); // Users must have separated inputSandbox files // these file will be generated into /tmp directory // and prefixed with the format <timestamp>_<user>_* // The timestamp format is: public static final String tsFormat = "yyyyMMddHHmmss"; // This variable holds the GridEngine' GridOperation identifier // associated to this application int gridOperationId = -1; //---------------------------- // Portlet Overriding Methods //---------------------------- /** * The init method will be called when installing the portlet for the first * time or when restarting the portal server. This is the right time to get * default values from WEBINF/portlet.xml file Those values will be assigned * into the application preferences as default values If preference values * already exists for this application the default settings will be * overwritten * * @see AppInfrastructureInfo * @see AppPreferences * * @throws PortletException */ @Override public void init() throws PortletException { // Load default values from WEBINF/portlet.xml appInitPreferences.setGridOperationDesc("" + getInitParameter("gridOperationDesc")); appInitPreferences.setPortletVersion("" + getInitParameter("portletVersion")); appInitPreferences.setLogLevel("" + getInitParameter("logLevel")); appInitPreferences.setNumInfrastructures("" + getInitParameter("numInfrastructures")); appInitPreferences.setGridOperationId("" + getInitParameter("gridOperationId")); // Get the number of infrastructures to load int numInfra = appInitPreferences.getNumInfrastructures(); _log.info("Number of infrastructures: '" + numInfra + "'"); // Load infrastructure settings for (int i = 0; i < numInfra; i++) { int j = i + 1; appInitPreferences.setInfrastructure(i, "" + getInitParameter(j + "_enableInfrastructure"), "" + getInitParameter(j + "_nameInfrastructure"), "" + getInitParameter(j + "_acronymInfrastructure"), "" + getInitParameter(j + "_bdiiHost"), "" + getInitParameter(j + "_wmsHosts"), "" + getInitParameter(j + "_pxServerHost"), "" + getInitParameter(j + "_pxServerPort"), "" + getInitParameter(j + "_pxServerSecure"), "" + getInitParameter(j + "_pxRobotId"), "" + getInitParameter(j + "_pxRobotVO"), "" + getInitParameter(j + "_pxRobotRole"), "" + getInitParameter(j + "_pxRobotRenewalFlag"), "" + getInitParameter(j + "_pxUserProxy"), "" + getInitParameter(j + "_softwareTags")); } // Load infrastructure settings appInitPreferences.setSciGwyUserTrackingDB_Hostname("" + getInitParameter("sciGwyUserTrackingDB_Hostname")); appInitPreferences.setSciGwyUserTrackingDB_Username("" + getInitParameter("sciGwyUserTrackingDB_Username")); appInitPreferences.setSciGwyUserTrackingDB_Password("" + getInitParameter("sciGwyUserTrackingDB_Password")); appInitPreferences.setSciGwyUserTrackingDB_Database("" + getInitParameter("sciGwyUserTrackingDB_Database")); appInitPreferences.setJobRequirements("" + getInitParameter("jobRequirements")); appInitPreferences.setPilotScript("" + getInitParameter("pilotScript")); // Assigns the log level _log.setLogLevel(appInitPreferences.getLogLevel()); // Show loaded values into log _log.info(appInitPreferences.dump()); } // init /** * This method allows the portlet to process an action request; this method * is normally called upon each user interaction (i.e. A submit button * inside a jsp' <form statement) This method determines the current * application mode through the actionRequest value: 'PortletStatus' and * then determines the correct view mode to assign through the * ActionResponse 'PortletStatus' variable that will be read by the doView * This method will also takes care about the std JSR168/286: EDIT and HELP * portlet modes. * @param request ActionRequest object instance * @param response ActionResponse object instance * * @throws PortletException * @throws IOException */ @Override public void processAction(ActionRequest request, ActionResponse response) throws PortletException, IOException { _log.info("calling processAction ..."); // Determine the username ThemeDisplay themeDisplay = (ThemeDisplay) request.getAttribute(WebKeys.THEME_DISPLAY); User user = themeDisplay.getUser(); String username = user.getScreenName(); String mail = user.getEmailAddress(); // Determine the application pathname PortletSession portletSession = request.getPortletSession(); PortletContext portletContext = portletSession.getPortletContext(); appServerPath = portletContext.getRealPath("/"); // Show info _log.info("appUserName : '" + username + "'" + LS + "appServerPath : '" + appServerPath + "'"); // Determine the current portlet mode and forward this state to the response // Accordingly to JSRs168/286 the standard portlet modes are: // VIEW, EDIT, HELP PortletMode mode = request.getPortletMode(); response.setPortletMode(mode); // Switch among different portlet modes: VIEW, EDIT, HELP // any custom modes are not covered by this template //---------- // VIEW Mode // // The actionStatus value will be taken from the calling jsp file // through the 'PortletStatus' parameter; the corresponding // VIEW mode will be stored registering the portlet status // as render parameter. See the call to setRenderParameter // If the actionStatus parameter is null or empty the default // action will be the ACTION_INPUT (input form) // This happens the first time the portlet is shown // The PortletStatus variable is managed by jsp and this java code //---------- if (mode.equals(PortletMode.VIEW)) { // The VIEW mode is the normal portlet mode where normal portlet // content will be shown to the user _log.info("Portlet mode: VIEW"); String actionStatus = request.getParameter("PortletStatus"); // Assigns the default ACTION mode /*if (null == actionStatus || actionStatus.equals("")) { actionStatus = "" + Actions.ACTION_INPUT; } */ if (null == actionStatus) actionStatus = request.getParameter("PostProcessPortletStatus"); if (null == actionStatus || actionStatus.equals("")) { actionStatus = "" + Actions.ACTION_INPUT; } // Different actions will be performed accordingly to the // different possible statuses switch (Actions.valueOf(actionStatus)) { case ACTION_ACTIVATE: _log.info("Got action: 'ACTION_ACTIVATE'"); // Called when activating the portlet for the first time // it will be used to save the gridOperationId value // into the application preferences gridOperationId = Integer.parseInt(request.getParameter("gridOperationId")); _log.info("Received gridOperationId: '" + gridOperationId + "'"); // If the application is registered go to the VIEW_INPUT // and the application will no longer go to the ACTIVATE pane if (gridOperationId > 0) { storePreferences(request); response.setRenderParameter("PortletStatus", "" + Views.VIEW_INPUT); } break; case ACTION_INPUT: _log.info("Got action: 'ACTION_INPUT'"); // Assign the correct view response.setRenderParameter("PortletStatus", "" + Views.VIEW_INPUT); break; case ACTION_PILOT: _log.info("Got action: 'ACTION_PILOT'"); // Stores the new pilot script String pilotScript = request.getParameter("pilotScript"); pilotScript.replaceAll("\r", ""); // storeString(appServerPath + "WEB-INF/job/" + appPreferences.getPilotScript(), pilotScript); // Assign the correct view response.setPortletMode(PortletMode.EDIT); break; case ACTION_SUBMIT: _log.info("Got action: 'ACTION_SUBMIT'"); // Get current preference values getPreferences(request, null); // Create the appInput object AppInput appInput = new AppInput(); // Stores the user submitting the job appInput.username = username; // Stores the user email address appInput.userEmail = mail; // Determine the submissionTimeStamp SimpleDateFormat dateFormat = new SimpleDateFormat(tsFormat); String timestamp = dateFormat.format(Calendar.getInstance().getTime()); appInput.timestamp = timestamp; // Process input fields and files to upload getInputForm(request, appInput); // Submit the job submitJob(appInput); //submitJobGroup(appInput); // Send the jobIdentifier and assign the correct view response.setRenderParameter("PortletStatus", "" + Views.VIEW_SUBMIT); response.setRenderParameter("jobIdentifier", "" + appInput.jobIdentifier); break; default: _log.info("Unhandled action: '" + actionStatus + "'"); response.setRenderParameter("PortletStatus", "" + Views.VIEW_INPUT); } // switch actionStatus } // VIEW //---------- // HELP Mode // // The HELP mode used to give portlet usage HELP to the user // This code will be called after the call to doHelp method //---------- else if (mode.equals(PortletMode.HELP)) { _log.info("Portlet mode: HELP"); } //---------- // EDIT Mode // // The EDIT mode is used to view/setup portlet preferences // This code will be called after the user sends the actionURL // generated by the doEdit method // The code below just stores new preference values or // reacts to the preference settings changes //---------- else if (mode.equals(PortletMode.EDIT)) { _log.info("Portlet mode: EDIT"); // Retrieve the current ifnrstructure in preference int numInfrastructures = appPreferences.getNumInfrastructures(); int currInfra = appPreferences.getCurrPaneInfrastructure(); _log.info(LS + "Number of infrastructures: '" + numInfrastructures + "'" + LS + "currentInfrastructure: '" + currInfra + "'" + LS); // Take care of the preference action (Infrastructure preferences) // <,>,+,- buttons String pref_action = "" + request.getParameter("pref_action"); _log.info("pref_action: '" + pref_action + "'"); // Reacts to the current infrastructure change and // determine the next view mode (return to the input pane) if (pref_action.equalsIgnoreCase("next")) { appPreferences.switchNextInfrastructure(); _log.info("Got next infrastructure action; switching to: '" + appPreferences.getCurrPaneInfrastructure() + "'"); } else if (pref_action.equalsIgnoreCase("previous")) { appPreferences.switchPreviousInfrastructure(); _log.info("Got prev infrastructure action; switching to: '" + appPreferences.getCurrPaneInfrastructure() + "'"); } else if (pref_action.equalsIgnoreCase("add")) { appPreferences.addNewInfrastructure(); _log.info("Got add infrastructure action; current infrastrucure is now: '" + appPreferences.getCurrPaneInfrastructure() + "'"); } else if (pref_action.equalsIgnoreCase("remove")) { appPreferences.delCurrInfrastructure(); _log.info("Got remove infrastructure action; current infrastrucure is now: '" + appPreferences.getCurrPaneInfrastructure() + "' and infrastructures are now: '" + appPreferences.getNumInfrastructures() + "'"); } else if (pref_action.equalsIgnoreCase("done")) { // None of the above actions selected; return to the VIEW mode response.setPortletMode(PortletMode.VIEW); response.setRenderParameter("PortletStatus", "" + Views.VIEW_INPUT); } else if (pref_action.equalsIgnoreCase("viewPilot")) { // None of the above actions selected; return to the VIEW mode response.setPortletMode(PortletMode.VIEW); response.setRenderParameter("PortletStatus", "" + Views.VIEW_PILOT); // response.setRenderParameter("pilotScript", updateString(appServerPath + "WEB-INF/job/" + appPreferences.getPilotScript())); } else { // No other special actions to do ... } // Number of infrastructures and Currentinfrastructure values // may be changed by add/delete,<,> actions int newCurrInfra = appPreferences.getCurrPaneInfrastructure(); int newNumInfrastructures = appPreferences.getNumInfrastructures(); // Store infrastructure changes String infrastructuresInformations = ""; // Preference settings (logLevel has been taken above) String newpref_logLevel = "" + request.getParameter("pref_logLevel"); String newpref_gridOperationId = "" + request.getParameter("pref_gridOperationId"); String newpref_jobRequirements = "" + request.getParameter("pref_jobRequirements"); String newpref_pilotScript = "" + request.getParameter("pref_pilotScript"); //LIC String newpref_sciGwyUserTrackingDB_Hostname = "" + request.getParameter("pref_sciGwyUserTrackingDB_Hostname"); String newpref_sciGwyUserTrackingDB_Username = "" + request.getParameter("pref_sciGwyUserTrackingDB_Username"); String newpref_sciGwyUserTrackingDB_Password = "" + request.getParameter("pref_sciGwyUserTrackingDB_Password"); String newpref_sciGwyUserTrackingDB_Database = "" + request.getParameter("pref_sciGwyUserTrackingDB_Database"); // Store infrastructure changes only if the user did not select the delete button if (newNumInfrastructures >= numInfrastructures) { // Current infrastructure preference settings AppInfrastructureInfo newpref_appInfrastructureInfo = new AppInfrastructureInfo( "" + request.getParameter("pref_enableInfrastructure"), "" + request.getParameter("pref_nameInfrastructure"), "" + request.getParameter("pref_acronymInfrastructure"), "" + request.getParameter("pref_bdiiHost"), "" + request.getParameter("pref_wmsHosts"), "" + request.getParameter("pref_pxServerHost"), "" + request.getParameter("pref_pxServerPort"), "" + request.getParameter("pref_pxServerSecure"), "" + request.getParameter("pref_pxRobotId"), "" + request.getParameter("pref_pxRobotVO"), "" + request.getParameter("pref_pxRobotRole"), "" + request.getParameter("pref_pxRobotRenewalFlag"), "" + request.getParameter("pref_pxUserProxy"), "" + request.getParameter("pref_softwareTags")); // newNumInfrastructures == numInfrastructures // the user selected < or > buttons; changes goes to the old (currInfra) value // otherwise + has been selected; changes goes again on the old (currInfra) value // the - case has been filtered out by newNumInfrastructures >= numInfrastructures String pref_enableInfrastructure = appPreferences.getEnableInfrastructure(currInfra - 1); String pref_nameInfrastructure = appPreferences.getNameInfrastructure(currInfra - 1); String pref_acronymInfrastructure = appPreferences.getAcronymInfrastructure(currInfra - 1); String pref_bdiiHost = appPreferences.getBdiiHost(currInfra - 1); String pref_wmsHosts = appPreferences.getWmsHosts(currInfra - 1); String pref_pxServerHost = appPreferences.getPxServerHost(currInfra - 1); String pref_pxServerPort = appPreferences.getPxServerPort(currInfra - 1); String pref_pxServerSecure = appPreferences.getPxServerSecure(currInfra - 1); String pref_pxRobotId = appPreferences.getPxRobotId(currInfra - 1); String pref_pxRobotVO = appPreferences.getPxRobotVO(currInfra - 1); String pref_pxRobotRole = appPreferences.getPxRobotRole(currInfra - 1); String pref_pxRobotRenewalFlag = appPreferences.getPxRobotRenewalFlag(currInfra - 1); String pref_pxUserProxy = appPreferences.getPxUserProxy(currInfra - 1); String pref_softwareTags = appPreferences.getSoftwareTags(currInfra - 1); // New preference values String newpref_enableInfrastructure = newpref_appInfrastructureInfo.getEnableInfrastructure(); String newpref_nameInfrastructure = newpref_appInfrastructureInfo.getNameInfrastructure(); String newpref_acronymInfrastructure = newpref_appInfrastructureInfo.getAcronymInfrastructure(); String newpref_bdiiHost = newpref_appInfrastructureInfo.getBdiiHost(); String newpref_wmsHosts = newpref_appInfrastructureInfo.getWmsHosts(); String newpref_pxServerHost = newpref_appInfrastructureInfo.getPxServerHost(); String newpref_pxServerPort = newpref_appInfrastructureInfo.getPxServerPort(); String newpref_pxServerSecure = newpref_appInfrastructureInfo.getPxServerSecure(); String newpref_pxRobotId = newpref_appInfrastructureInfo.getPxRobotId(); String newpref_pxRobotVO = newpref_appInfrastructureInfo.getPxRobotVO(); String newpref_pxRobotRole = newpref_appInfrastructureInfo.getPxRobotRole(); String newpref_pxRobotRenewalFlag = newpref_appInfrastructureInfo.getPxRobotRenewalFlag(); String newpref_pxUserProxy = newpref_appInfrastructureInfo.getPxUserProxy(); String newpref_softwareTags = newpref_appInfrastructureInfo.getSoftwareTags(); // Prepare the Log string with differences infrastructuresInformations += LS + "Infrastructure #" + currInfra + LS + " enableInfrastructure : '" + pref_enableInfrastructure + "' -> '" + newpref_enableInfrastructure + "'" + LS + " nameInfrastructures : '" + pref_nameInfrastructure + "' -> '" + newpref_nameInfrastructure + "'" + LS + " acronymInfrastructures: '" + pref_acronymInfrastructure + "' -> '" + newpref_acronymInfrastructure + "'" + LS + " bdiiHost : '" + pref_bdiiHost + "' -> '" + newpref_bdiiHost + "'" + LS + " wmsHosts : '" + pref_wmsHosts + "' -> '" + newpref_wmsHosts + "'" + LS + " pxServerHost : '" + pref_pxServerHost + "' -> '" + newpref_pxServerHost + "'" + LS + " pxServerPort : '" + pref_pxServerPort + "' -> '" + newpref_pxServerPort + "'" + LS + " pxServerSecure : '" + pref_pxServerSecure + "' -> '" + newpref_pxServerSecure + "'" + LS + " pxRobotId : '" + pref_pxRobotId + "' -> '" + newpref_pxRobotId + "'" + LS + " pxRobotVO : '" + pref_pxRobotVO + "' -> '" + newpref_pxRobotVO + "'" + LS + " pxRobotRole : '" + pref_pxRobotRole + "' -> '" + newpref_pxRobotRole + "'" + LS + " pxRobotRenewalFlag : '" + pref_pxRobotRenewalFlag + "' -> '" + newpref_pxRobotRenewalFlag + "'" + LS + " pxUserProxy : '" + pref_pxUserProxy + "' -> '" + newpref_pxUserProxy + "'" + LS + " softwareTags : '" + pref_softwareTags + "' -> '" + newpref_softwareTags + "'" + LS; // Assigns the new values appPreferences.setInfrastructure(currInfra - 1, newpref_enableInfrastructure, newpref_nameInfrastructure, newpref_acronymInfrastructure, newpref_bdiiHost, newpref_wmsHosts, newpref_pxServerHost, newpref_pxServerPort, newpref_pxServerSecure, newpref_pxRobotId, newpref_pxRobotVO, newpref_pxRobotRole, newpref_pxRobotRenewalFlag, newpref_pxUserProxy, newpref_softwareTags); } // newCurrInfra >= currInfra // Show preference value changes _log.info(LS + "variable name : 'Old Value' -> 'New value'" + LS + "---------------------------------------------------" + LS + "pref_logLevel : '" + appPreferences.getLogLevel() + "' -> '" + newpref_logLevel + "'" + LS + "pref_gridOperationId : '" + appPreferences.getGridOperationId() + "' -> '" + newpref_gridOperationId + "'" + LS + "pref_numInfrastructures : '" + appPreferences.getNumInfrastructures() + "' -> '" + numInfrastructures + "'" + LS + infrastructuresInformations + LS + "pref_jobRequirements : '" + appPreferences.getJobRequirements() + "' -> '" + newpref_jobRequirements + "'" + LS + "pref_pilotScript : '" + appPreferences.getPilotScript() + "' -> '" + newpref_pilotScript + "'" + LS + "pref_sciGwyUserTrackingDB_Hostname : '" + appPreferences.getSciGwyUserTrackingDB_Hostname() + "' -> '" + newpref_sciGwyUserTrackingDB_Hostname + "'" + LS + "pref_sciGwyUserTrackingDB_Username : '" + appPreferences.getSciGwyUserTrackingDB_Username() + "' -> '" + newpref_sciGwyUserTrackingDB_Username + "'" + LS + "pref_sciGwyUserTrackingDB_Password : '" + appPreferences.getSciGwyUserTrackingDB_Password() + "' -> '" + newpref_sciGwyUserTrackingDB_Password + "'" + LS + "pref_sciGwyUserTrackingDB_Database : '" + appPreferences.getSciGwyUserTrackingDB_Database() + "' -> '" + newpref_sciGwyUserTrackingDB_Database + "'" + LS); // Assign the new variable to the preference object appPreferences.setLogLevel(newpref_logLevel); appPreferences.setGridOperationId(newpref_gridOperationId); appPreferences.setJobRequirements(newpref_jobRequirements); appPreferences.setPilotScript(newpref_pilotScript); //LIC appPreferences.setSciGwyUserTrackingDB_Hostname(newpref_sciGwyUserTrackingDB_Hostname); appPreferences.setSciGwyUserTrackingDB_Username(newpref_sciGwyUserTrackingDB_Username); appPreferences.setSciGwyUserTrackingDB_Password(newpref_sciGwyUserTrackingDB_Password); appPreferences.setSciGwyUserTrackingDB_Database(newpref_sciGwyUserTrackingDB_Database); // Store new preferences storePreferences(request); } // EDIT Mode //---------- // EDIT Mode // // Any custom portlet mode should be placed here below //---------- else { // Unsupported portlet modes come here _log.warn("Custom portlet mode: '" + mode.toString() + "'"); } // CUSTOM Mode } // processAction /** * This method is responsible to assign the correct Application view the * view mode is taken from the renderRequest instance by the PortletStatus * patameter or automatically assigned accordingly to the Application * status/default view mode * * @param request RenderRequest instance normally sent by the processAction * @param response RenderResponse used to send values to the jsp page * * @throws PortletException * @throws IOException */ @Override protected void doView(RenderRequest request, RenderResponse response) throws PortletException, IOException { _log.info("calling doView ..."); response.setContentType("text/html"); // Get current preference values getPreferences(null, request); gridOperationId = Integer.parseInt(appPreferences.getGridOperationId()); _log.info("GridOperationId: '" + gridOperationId + "'"); // currentView comes from the processAction; unless such method // is not called before (example: page shown with no user action) // In case the application is not yet register (gridOperationId<0) // the VIEW_INITIALIZE pane will be enforced otherwise the // VIEW_INPUT will be selected as default view String currentView = request.getParameter("PortletStatus"); if (currentView == null) { currentView = "VIEW_INPUT"; } if (gridOperationId < 0) { currentView = "VIEW_ACTIVATE"; } // Different actions will be performed accordingly to the // different possible view modes switch (Views.valueOf(currentView)) { // The following code is responsible to call the proper jsp file // that will provide the correct portlet interface case VIEW_ACTIVATE: { _log.info("VIEW_ACTIVATE Selected ..."); /* * Following statements requires a patch on the GridEngine not yet included and related * to the application auto registration feature (see code appAutoRegistration.java) * // Portlet uses the couple (portalName,GridOperationDesc) // to be identified by the GridEngine UserTrackingDB // VIEW_INITIALIZE checks if the Application is already // registered or not try { UsersTrackingDBInterface utDB = new UsersTrackingDBInterface(); Company company = PortalUtil.getCompany(request); portalName = company.getName(); String operationDesc = appPreferences.getGridOperationDesc(); int utId = utDB.registerOperation(portalName, operationDesc); PortletPreferences portletPreferences= request.getPreferences(); // Show values ... _log.info(LS+"Check configuration" +LS+"--------------------" +LS+"utId : '"+utId+"'" +LS+"portalName : '"+portalName+"'" +LS+"operationDesc : '"+appPreferences.getGridOperationDesc()+"'" ); // _log // Show the registration page request.setAttribute("gridOperationDesc", operationDesc); request.setAttribute( "gridOperationId", utId); request.setAttribute( "portal", portalName); request.setAttribute( "appPreferences",appPreferences); PortletRequestDispatcher dispatcher=getPortletContext().getRequestDispatcher("/activate.jsp"); dispatcher.include(request, response); } catch (PortalException ex) { _log.error("Got exception: '"+ex.toString()+"'"); } catch (SystemException ex) { _log.error("Got exception: '"+ex.toString()+"'"); } * Application autoregistration feature */ } break; case VIEW_INPUT: { _log.info("VIEW_INPUT Selected ..."); //obtaining runnning collections of jobs //jobs will be store here java.util.Vector<ActiveInteractions> myJobs = new java.util.Vector<ActiveInteractions>(); //db conection UsersTrackingDBInterface dbInterface = new UsersTrackingDBInterface(); // this is where the info will be stored Map<String, String> jobs = new HashMap<String, String>(); //extract relevant job information myJobs = dbInterface.getActiveInteractionsByName("test"); for (ActiveInteractions job : myJobs) { String[] interactionInfos = job.getInteractionInfos(); jobs.put(interactionInfos[0], interactionInfos[3] + "-" + interactionInfos[5]); } /* myJobs = dbInterface.getDoneInteractionsByName("test"); for (ActiveInteractions job: myJobs){ String[] interactionInfos = job.getInteractionInfos(); jobs.put(interactionInfos[0], interactionInfos[3] + "-" + interactionInfos[5]); } */ request.setAttribute("jobs", jobs); PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher("/input.jsp"); dispatcher.include(request, response); } break; case VIEW_PILOT: { _log.info("VIEW_PILOT Selected ..."); String pilotScript = request.getParameter("pilotScript"); request.setAttribute("pilotScript", pilotScript); PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher("/viewPilot.jsp"); dispatcher.include(request, response); } break; case VIEW_SUBMIT: { _log.info("VIEW_SUBMIT Selected ..."); String jobIdentifier = request.getParameter("jobIdentifier"); request.setAttribute("jobIdentifier", jobIdentifier); PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher("/submit.jsp"); dispatcher.include(request, response); } break; default: _log.info("Unknown view mode: " + currentView.toString()); } // switch } // doView /** * This method is responsible to retrieve the current Application preference * settings and then show the edit.jsp page where the user can edit the * Application preferences This methods prepares an actionURL that will be * used by edit.jsp file into a <input ...> form As soon the user press the * action button the processAction will be called going in EDIT mode This * method is equivalent to the doView method * * @param request Render request object instance * @param response Render response object isntance * * @throws PortletException * @throws IOException * */ @Override public void doEdit(RenderRequest request, RenderResponse response) throws PortletException, IOException { response.setContentType("text/html"); _log.info("Calling doEdit ..."); // Get current preference values getPreferences(null, request); // Get the current infrastructure and the number of infrastructure int currInfra = appPreferences.getCurrPaneInfrastructure(); int numInfrastructures = appPreferences.getNumInfrastructures(); // ActionURL and the current preference value will be passed to the edit.jsp PortletURL pref_actionURL = response.createActionURL(); request.setAttribute("pref_actionURL", pref_actionURL.toString()); // Send preference values request.setAttribute("pref_logLevel", "" + appPreferences.getLogLevel()); request.setAttribute("pref_numInfrastructures", "" + appPreferences.getNumInfrastructures()); request.setAttribute("pref_currInfrastructure", "" + appPreferences.getCurrPaneInfrastructure()); request.setAttribute("pref_gridOperationId", "" + appPreferences.getGridOperationId()); request.setAttribute("pref_gridOperationDesc", "" + appPreferences.getGridOperationDesc()); // Send Infrastructure specific data if (0 <= currInfra && currInfra <= numInfrastructures) { request.setAttribute("pref_enableInfrastructure", appPreferences.getEnableInfrastructure(currInfra - 1)); request.setAttribute("pref_nameInfrastructure", appPreferences.getNameInfrastructure(currInfra - 1)); request.setAttribute("pref_acronymInfrastructure", appPreferences.getAcronymInfrastructure(currInfra - 1)); request.setAttribute("pref_bdiiHost", appPreferences.getBdiiHost(currInfra - 1)); request.setAttribute("pref_wmsHosts", appPreferences.getWmsHosts(currInfra - 1)); request.setAttribute("pref_pxServerHost", appPreferences.getPxServerHost(currInfra - 1)); request.setAttribute("pref_pxServerPort", appPreferences.getPxServerPort(currInfra - 1)); request.setAttribute("pref_pxServerSecure", appPreferences.getPxServerSecure(currInfra - 1)); request.setAttribute("pref_pxRobotId", appPreferences.getPxRobotId(currInfra - 1)); request.setAttribute("pref_pxRobotVO", appPreferences.getPxRobotVO(currInfra - 1)); request.setAttribute("pref_pxRobotRole", appPreferences.getPxRobotRole(currInfra - 1)); request.setAttribute("pref_pxRobotRenewalFlag", appPreferences.getPxRobotRenewalFlag(currInfra - 1)); request.setAttribute("pref_pxUserProxy", appPreferences.getPxUserProxy(currInfra - 1)); request.setAttribute("pref_softwareTags", appPreferences.getSoftwareTags(currInfra - 1)); } // if paneInfrastructure > 0 request.setAttribute("pref_jobRequirements", appPreferences.getJobRequirements()); request.setAttribute("pref_pilotScript", appPreferences.getPilotScript()); //LIC request.setAttribute("pref_sciGwyUserTrackingDB_Hostname", appPreferences.getSciGwyUserTrackingDB_Hostname()); request.setAttribute("pref_sciGwyUserTrackingDB_Username", appPreferences.getSciGwyUserTrackingDB_Username()); request.setAttribute("pref_sciGwyUserTrackingDB_Password", appPreferences.getSciGwyUserTrackingDB_Password()); request.setAttribute("pref_sciGwyUserTrackingDB_Database", appPreferences.getSciGwyUserTrackingDB_Database()); // The edit.jsp will be the responsible to show/edit the current preference values PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher("/edit.jsp"); dispatcher.include(request, response); } // doEdit /** * This method just calls the jsp responsible to show the portlet * information This method is equivalent to the doView method * * @param request Render request object instance * @param response Render response object isntance * * @throws PortletException * @throws IOException */ @Override public void doHelp(RenderRequest request, RenderResponse response) throws PortletException, IOException { _log.info("Calling doHelp ..."); response.setContentType("text/html"); request.setAttribute("portletVersion", appPreferences.getPortletVersion()); PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher("/help.jsp"); dispatcher.include(request, response); } // doHelp //---------------------------- // Portlet Standard Methods //---------------------------- /** * This method is used to retrieve from the Application preferences the * GridEngine' GridOperations identifier associated to this application Such * index is automatically created when registering the application with the * couple (portalName,applicationDesc) The portal name is automatically * extracted from the Application The portal description is defined in the * default parameters (portlet.xml) This method can be called by * processAction or doViewe evakuating one of the corresponding * actionRequest or renderRequest object instances * * @param actionRequest an ActionRequest instance or, * @param renderRequest a RenderRequest instance * @return The GridOperationId associated to this application or -1 if the * application is not yet registered * * @see AppPreferences * * private String getPrefGridOperationId(ActionRequest actionRequest , * RenderRequest renderRequest) { PortletPreferences portletPreferences; * String prefOperationId=""; if(null != actionRequest) { * portletPreferences= actionRequest.getPreferences(); prefOperationId = * portletPreferences.getValue("pref_gridOperationId","-1"); } if(null != * renderRequest) { portletPreferences= renderRequest.getPreferences(); * prefOperationId = * portletPreferences.getValue("pref_gridOperationId","-1"); } return * prefOperationId; } */ /** * This method Uses the AppPreference object settings to store Application * preferences * * @param request ActinRequest instance (called by the processAction) * * @throws PortletException * @throws IOException */ void storePreferences(ActionRequest request) throws PortletException, IOException { _log.info("Calling storePreferences ..."); // Stored preference content String storedPrefs = "Stored preferences:" + LS + "-------------------" + LS; // The code below stores all the portlet preference values PortletPreferences prefs = request.getPreferences(); if (prefs != null) { String logLevel = appPreferences.getLogLevel(); String gridOperationId = appPreferences.getGridOperationId(); int numInfrastructures = appPreferences.getNumInfrastructures(); int currPaneInfrastructure = appPreferences.getCurrPaneInfrastructure(); String gridOperationDesc = appPreferences.getGridOperationDesc(); prefs.setValue("pref_logLevel", "" + logLevel); prefs.setValue("pref_gridOperationId", "" + gridOperationId); prefs.setValue("pref_gridOperationDesc", "" + gridOperationDesc); prefs.setValue("pref_numInfrastructures", "" + numInfrastructures); prefs.setValue("pref_currInfrastructure", "" + currPaneInfrastructure); storedPrefs += "pref_logLevel : '" + logLevel + "'" + LS + "pref_gridOperationId : '" + gridOperationId + "'" + LS + "pref_gridOperationDesc : '" + gridOperationDesc + "'" + LS + "pref_numInfrastructures : '" + numInfrastructures + "'" + LS + "pref_currInfrastructure : '" + currPaneInfrastructure + "'" + LS; // For each preference infrastructure for (int i = 0; i < numInfrastructures; i++) { int j = i + 1; storedPrefs = LS + "Infrastructure #" + j + LS + "--------------------" + LS; String enableInfrastructure = appPreferences.getEnableInfrastructure(i); String nameInfrastructure = appPreferences.getNameInfrastructure(i); String acronymInfrastructure = appPreferences.getAcronymInfrastructure(i); String bdiiHost = appPreferences.getBdiiHost(i); String wmsHost = appPreferences.getWmsHosts(i); String pxServerHost = appPreferences.getPxServerHost(i); String pxServerPort = appPreferences.getPxServerPort(i); String pxServerSecure = appPreferences.getPxServerSecure(i); String pxRobotId = appPreferences.getPxRobotId(i); String pxRobotVO = appPreferences.getPxRobotVO(i); String pxRobotRole = appPreferences.getPxRobotRole(i); String pxRobotRenewalFlag = appPreferences.getPxRobotRenewalFlag(i); String pxUserProxy = appPreferences.getPxUserProxy(i); String softwareTags = appPreferences.getSoftwareTags(i); // Set preference values prefs.setValue("pref_" + j + "_enableInfrastructure", enableInfrastructure); prefs.setValue("pref_" + j + "_nameInfrastructure", nameInfrastructure); prefs.setValue("pref_" + j + "_acronymInfrastructure", acronymInfrastructure); prefs.setValue("pref_" + j + "_bdiiHost", bdiiHost); prefs.setValue("pref_" + j + "_wmsHosts", wmsHost); prefs.setValue("pref_" + j + "_pxServerHost", pxServerHost); prefs.setValue("pref_" + j + "_pxServerPort", pxServerPort); prefs.setValue("pref_" + j + "_pxServerSecure", pxServerSecure); prefs.setValue("pref_" + j + "_pxRobotId", pxRobotId); prefs.setValue("pref_" + j + "_pxRobotVO", pxRobotVO); prefs.setValue("pref_" + j + "_pxRobotRole", pxRobotRole); prefs.setValue("pref_" + j + "_pxRobotRenewalFlag", pxRobotRenewalFlag); prefs.setValue("pref_" + j + "_pxUserProxy", pxUserProxy); prefs.setValue("pref_" + j + "_softwareTags", softwareTags); // Dumps the infrastructure preferences storedPrefs += " pref_" + j + "_enableInfrastructure : '" + enableInfrastructure + "'" + LS + " pref_" + j + "_nameInfrastructure : '" + nameInfrastructure + "'" + LS + " pref_" + j + "_acronymInfrastructure: '" + acronymInfrastructure + "'" + LS + " pref_" + j + "_bdiiHost : '" + bdiiHost + "'" + LS + " pref_" + j + "_wmsHosts : '" + wmsHost + "'" + LS + " pref_" + j + "_pxServerHost : '" + pxServerHost + "'" + LS + " pref_" + j + "_pxServerPort : '" + pxServerPort + "'" + LS + " pref_" + j + "_pxServerSecure : '" + pxServerSecure + "'" + LS + " pref_" + j + "_pxRobotId : '" + pxRobotId + "'" + LS + " pref_" + j + "_pxRobotVO : '" + pxRobotVO + "'" + LS + " pref_" + j + "_pxRobotRole : '" + pxRobotRole + "'" + LS + " pref_" + j + "_pxRobotRenewalFlag : '" + pxRobotRenewalFlag + "'" + LS + " pref_" + j + "_pxUserProxy : '" + pxUserProxy + "'" + LS + " pref_" + j + "_softwareTags : '" + softwareTags + "'" + LS; } // for each preference infrastructure String jobRequirements = appInitPreferences.getJobRequirements(); String pilotScript = appInitPreferences.getPilotScript(); prefs.setValue("pref_jobRequirements", jobRequirements); prefs.setValue("pref_pilotScript", pilotScript); //LIC String sciGwyUserTrackingDB_Hostname = appPreferences.getSciGwyUserTrackingDB_Hostname(); String sciGwyUserTrackingDB_Username = appPreferences.getSciGwyUserTrackingDB_Username(); String sciGwyUserTrackingDB_Password = appPreferences.getSciGwyUserTrackingDB_Password(); String sciGwyUserTrackingDB_Database = appPreferences.getSciGwyUserTrackingDB_Database(); prefs.setValue("pref_sciGwyUserTrackingDB_Hostname", sciGwyUserTrackingDB_Hostname); prefs.setValue("pref_sciGwyUserTrackingDB_Username", sciGwyUserTrackingDB_Username); prefs.setValue("pref_sciGwyUserTrackingDB_Password", sciGwyUserTrackingDB_Password); prefs.setValue("pref_sciGwyUserTrackingDB_Database", sciGwyUserTrackingDB_Database); storedPrefs += "pref_jobRequirements : '" + jobRequirements + "'" + LS + "pref_pilotScript : '" + pilotScript + "'" + LS + "pref_sciGwyUserTrackingDB_Hostname: '" + sciGwyUserTrackingDB_Hostname + "'" + LS + "pref_sciGwyUserTrackingDB_Username: '" + sciGwyUserTrackingDB_Username + "'" + LS + "pref_sciGwyUserTrackingDB_Password: '" + sciGwyUserTrackingDB_Password + "'" + LS + "pref_sciGwyUserTrackingDB_Database: '" + sciGwyUserTrackingDB_Database + "'" + LS; // Store preferences prefs.store(); } // pref !=null // Show saved preferences _log.info("Stored preferences" + LS + "------------------" + storedPrefs + LS); } // storePreferences /** * This method fills the appPreferences values retrieving them frorm the * portlet preference object. This method can be called by both * processAction or doView methods in case no preference values are yet * defined the default settings loaded by the init method will be used * * @param actionRequest an ActionRequest instance or, * @param renderRequest a RenderRequest instance * */ private void getPreferences(ActionRequest actionRequest, RenderRequest renderRequest) { _log.info("Calling: getPreferences ..."); PortletPreferences prefs = null; if (null != actionRequest) { prefs = actionRequest.getPreferences(); } else if (null != renderRequest) { prefs = renderRequest.getPreferences(); } else { _log.warn("Both render request and action request are null"); } if (null != prefs) { appPreferences.updateValue("logLevel", "" + prefs.getValue("pref_logLevel", appInitPreferences.getLogLevel())); appPreferences.updateValue("gridOperationId", "" + prefs.getValue("pref_gridOperationId", appInitPreferences.getGridOperationId())); appPreferences.updateValue("gridOperationDesc", "" + prefs.getValue("pref_gridOperationDesc", appInitPreferences.getGridOperationDesc())); appPreferences.updateValue("numInfrastructures", "" + prefs.getValue("pref_numInfrastructures", "" + appInitPreferences.getNumInfrastructures())); // Now retrieves the infrastructures information int numInfras = appPreferences.getNumInfrastructures(); _log.info("getpref: num infra=" + numInfras); // For each infrastructure ... // The preference name is indexed with the infrastructure number: 1,2,... String infrastructuresInfrormations = ""; for (int i = 0; i < numInfras; i++) { int j = i + 1; int k = appInitPreferences.getNumInfrastructures(); appPreferences.updateInfrastructureValue(i, "enableInfrastructure", "" + prefs.getValue("pref_" + j + "_enableInfrastructure", (i < k) ? appInitPreferences.getEnableInfrastructure(i) : "")); appPreferences.updateInfrastructureValue(i, "nameInfrastructure", "" + prefs.getValue("pref_" + j + "_nameInfrastructure", (i < k) ? appInitPreferences.getNameInfrastructure(i) : "")); appPreferences.updateInfrastructureValue(i, "acronymInfrastructure", "" + prefs.getValue("pref_" + j + "_acronymInfrastructure", (i < k) ? appInitPreferences.getAcronymInfrastructure(i) : "")); appPreferences.updateInfrastructureValue(i, "bdiiHost", "" + prefs .getValue("pref_" + j + "_bdiiHost", (i < k) ? appInitPreferences.getBdiiHost(i) : "")); appPreferences.updateInfrastructureValue(i, "wmsHosts", "" + prefs .getValue("pref_" + j + "_wmsHosts", (i < k) ? appInitPreferences.getWmsHosts(i) : "")); appPreferences.updateInfrastructureValue(i, "pxServerHost", "" + prefs.getValue("pref_" + j + "_pxServerHost", (i < k) ? appInitPreferences.getPxServerHost(i) : "")); appPreferences.updateInfrastructureValue(i, "pxServerPort", "" + prefs.getValue("pref_" + j + "_pxServerPort", (i < k) ? appInitPreferences.getPxServerPort(i) : "")); appPreferences.updateInfrastructureValue(i, "pxServerSecure", "" + prefs.getValue("pref_" + j + "_pxServerSecure", (i < k) ? appInitPreferences.getPxServerSecure(i) : "")); appPreferences.updateInfrastructureValue(i, "pxRobotId", "" + prefs .getValue("pref_" + j + "_pxRobotId", (i < k) ? appInitPreferences.getPxRobotId(i) : "")); appPreferences.updateInfrastructureValue(i, "pxRobotVO", "" + prefs .getValue("pref_" + j + "_pxRobotVO", (i < k) ? appInitPreferences.getPxRobotVO(i) : "")); appPreferences.updateInfrastructureValue(i, "pxRobotRole", "" + prefs.getValue("pref_" + j + "_pxRobotRole", (i < k) ? appInitPreferences.getPxRobotRole(i) : "")); appPreferences.updateInfrastructureValue(i, "pxRobotRenewalFlag", "" + prefs.getValue("pref_" + j + "_pxRobotRenewalFlag", (i < k) ? appInitPreferences.getPxRobotRenewalFlag(i) : "")); appPreferences.updateInfrastructureValue(i, "pxUserProxy", "" + prefs.getValue("pref_" + j + "_pxUserProxy", (i < k) ? appInitPreferences.getPxUserProxy(i) : "")); appPreferences.updateInfrastructureValue(i, "softwareTags", "" + prefs.getValue("pref_" + j + "_softwareTags", (i < k) ? appInitPreferences.getSoftwareTags(i) : "")); _log.info("dump: " + LS + appPreferences.dumpInfrastructure(i)); } // for each Infrastructure appPreferences.updateValue("jobRequirements", "" + prefs.getValue("pref_jobRequirements", appInitPreferences.getJobRequirements())); appPreferences.updateValue("pilotScript", "" + prefs.getValue("pref_pilotScript", appInitPreferences.getPilotScript())); //LIC appPreferences.updateValue("sciGwyUserTrackingDB_Hostname", "" + prefs.getValue("pref_sciGwyUserTrackingDB_Hostname", appInitPreferences.getSciGwyUserTrackingDB_Hostname())); appPreferences.updateValue("sciGwyUserTrackingDB_Username", "" + prefs.getValue("pref_sciGwyUserTrackingDB_Username", appInitPreferences.getSciGwyUserTrackingDB_Username())); appPreferences.updateValue("sciGwyUserTrackingDB_Password", "" + prefs.getValue("pref_sciGwyUserTrackingDB_Password", appInitPreferences.getSciGwyUserTrackingDB_Password())); appPreferences.updateValue("sciGwyUserTrackingDB_Database", "" + prefs.getValue("pref_sciGwyUserTrackingDB_Database", appInitPreferences.getSciGwyUserTrackingDB_Database())); // Assigns the log level _log.setLogLevel(appPreferences.getLogLevel()); // Show preference values into log _log.info(appPreferences.dump()); } // if } // getPreferences /** * This enumerated type contains all JSP input items to be managed by the * getInputForm method * * @see getInputForm */ private enum inputControlsIds { JobIdentifier // User defined Job identifier , jobPID, inputURL, file_inputFile /* JobIdentifier, // User defined Job identifier collection_type, task_number, parametric_executable, executables, argument, final_executable, final_argument */ }; /** * This method manages the user input fields managing two cases * distinguished by the type of the input <form ... statement The use of * upload file controls needs the use of "multipart/form-data" while the * else condition of the isMultipartContent check manages the standard input * case. The multipart content needs a manual processing of all <form items * All form' input items are identified by the 'name' input property inside * the jsp file * @param request ActionRequest instance (processAction) * @param appInput AppInput instance storing the jobSubmission data */ void getInputForm(ActionRequest request, molon_portlet.AppInput appInput) { if (PortletFileUpload.isMultipartContent(request)) { try { FileItemFactory factory = new DiskFileItemFactory(); PortletFileUpload upload = new PortletFileUpload(factory); List items = upload.parseRequest(request); File repositoryPath = new File("/tmp"); DiskFileItemFactory diskFileItemFactory = new DiskFileItemFactory(); diskFileItemFactory.setRepository(repositoryPath); Iterator iter = items.iterator(); String logstring = ""; int i = 0; int j = 0; while (iter.hasNext()) { FileItem item = (FileItem) iter.next(); String fieldName = item.getFieldName(); String fileName = item.getName(); String contentType = item.getContentType(); boolean isInMemory = item.isInMemory(); long sizeInBytes = item.getSize(); // Prepare a log string with field list switch (molon_portlet.inputControlsIds.valueOf(fieldName)) { case jobPID: logstring += LS + "FIELD IS A JOB PID WITH NAME : '" + item.getString() + "'"; appInput.jobPID = item.getString(); break; case inputURL: logstring += LS + "FIELD IS AN INPUT URL WITH NAME : '" + item.getString() + "'"; appInput.inputURL = item.getString(); break; case JobIdentifier: logstring += LS + "FIELD IS A JOB IDENTIFIER WITH NAME : '" + item.getString() + "'"; appInput.jobIdentifier = item.getString(); break; case file_inputFile: if (fileName == "") break; logstring += LS + "FIELD IS A FILE WITH NAME : '" + fileName + "'"; appInput.inputFile = appInput.path + "/" + fileName; logstring += LS + "COPYING IT TO PATH : '" + appInput.path + "'"; copyFile(item, appInput.inputFile); break; default: _log.warn("Unhandled input field: '" + fieldName + "' - '" + item.getString() + "'"); } // switch fieldName } // while iter.hasNext() _log.info(LS + "Reporting" + LS + "---------" + LS + logstring + LS); } // try catch (Exception e) { _log.info("Caught exception while processing files to upload: '" + e.toString() + "'"); } } // The input form do not use the "multipart/form-data" else { // Retrieve from the input form the given application values // appInput.inputFileName = (String) request.getParameter("file_inputFile"); // appInput.inputFileText = (String) request.getParameter("inputFile"); appInput.jobIdentifier = (String) request.getParameter("JobIdentifier"); } // ! isMultipartContent // Show into the log the taken inputs _log.info(LS + "Taken input parameters:" + LS + "-----------------------" // + LS + "inputFileName: '" + appInput.inputFileName + "'" // + LS + "inputFileText: '" + appInput.inputFileText + "'" + LS + "jobIdentifier: '" + appInput.jobIdentifier + "'" + LS + "jobPID: '" + appInput.jobPID + "'" + LS + "inputURL: '" + appInput.inputURL + "'" + LS + "inputFile: '" + appInput.inputFile + "'" + LS); } // getInputForm /** * This method sends the job into the distributed infrastructure using the * GridEngine methods * * @param appInput AppInput instance storing the jobSubmission data */ /* void submitJobGroup(AppInput appInput) { _log.info("Starting to submit job"); String inputFiles= appServerPath + "molonFiles/URLParser.py"; inputFiles += "," + appServerPath+ "molonFiles/Molon.sh"; GEJobDescription taskToExecute = new GEJobDescription(); taskToExecute.setExecutable("/usr/bin/env"); // Application executable taskToExecute.setArguments("sh Molon.sh " + appInput.jobPID); taskToExecute.setOutputPath("/tmp/"); // Output Path taskToExecute.setOutput("molon-Output.txt"); // Distributed application standard output taskToExecute.setError("molon-Error.txt"); // Distrubuted application standard error taskToExecute.setOutputFiles("molon-Files.tar.gz"); // Hostname output files (created by the pilot script) taskToExecute.setInputFiles(inputFiles); ArrayList<GEJobDescription> tasksToExecute = new ArrayList<GEJobDescription>(); tasksToExecute.add(taskToExecute); // GridEngine' JobCollectionSubmission job submission object JobCollectionSubmission tmpJobCollectionSubmission = null; JobCollection collection = new JobCollection(appInput.username, appInput.jobIdentifier, "/tmp", tasksToExecute); if (null != appPreferences.getSciGwyUserTrackingDB_Hostname() && !appPreferences.getSciGwyUserTrackingDB_Hostname().equals("") && null != appPreferences.getSciGwyUserTrackingDB_Username() && !appPreferences.getSciGwyUserTrackingDB_Username().equals("") && null != appPreferences.getSciGwyUserTrackingDB_Password() && !appPreferences.getSciGwyUserTrackingDB_Password().equals("") && null != appPreferences.getSciGwyUserTrackingDB_Database() && !appPreferences.getSciGwyUserTrackingDB_Database().equals("")) { String arg1 = "jdbc:mysql://" + appPreferences.getSciGwyUserTrackingDB_Hostname() + "/" + appPreferences.getSciGwyUserTrackingDB_Database(); String arg2 = appPreferences.getSciGwyUserTrackingDB_Username(); String arg3 = appPreferences.getSciGwyUserTrackingDB_Password(); _log.info("JobCollectionSubmission [DEVEL]\n" + LS + " Arg1: '" + arg1 + "'" + LS + " Arg2: '" + arg2 + "'" + LS + " Arg3: '" + arg3 + "'"); tmpJobCollectionSubmission = new JobCollectionSubmission(arg1, arg2, arg3, collection); } else { tmpJobCollectionSubmission = new JobCollectionSubmission(collection); _log.info("JobCollectionSubmission [PROD]"); } // Assigns all enabled infrastructures InfrastructureInfo[] infrastructuresInfo = appPreferences.getEnabledInfrastructures(); // Check the enabled infrastructures if (infrastructuresInfo.length > 0) { // Application Id int applicationId = Integer.parseInt(appPreferences.getGridOperationId()); // Grid Engine' UserTraking needs the portal IP address String portalIPAddress = ""; try { InetAddress addr = InetAddress.getLocalHost(); byte[] ipAddr = addr.getAddress(); portalIPAddress = "" + ipAddr[0] + ":" + ipAddr[1] + ":" + ipAddr[2] + ":" + ipAddr[3]; } catch (Exception e) { _log.error("Unable to get the portal IP address"); } // Submit Collection tmpJobCollectionSubmission.submitJobCollection(infrastructuresInfo, portalIPAddress, applicationId); // Show log // View jobSubmission details in the log _log.info( LS + "Job Collection Sent" + LS + "-------" + LS + "Portal address: '" + portalIPAddress + "'" + LS); // _log.info } // numInfra > 0 else { _log.warn( LS + "There are no enough enabled infrastructures!" + LS + "It is impossible to send any job" + LS + "Configure the application preferences in order to setup" + LS + "or enable at least one infrastructure." + LS); } // numInfra == 0 } // submitJob */ void submitJob(AppInput appInput) { InfrastructureInfo[] infrastructuresInfo = appPreferences.getEnabledInfrastructures(); // Check the enabled infrastructures if (infrastructuresInfo.length > 0) { // Application Id int applicationId = Integer.parseInt(appPreferences.getGridOperationId()); // Grid Engine' UserTraking needs the portal IP address String portalIPAddress = ""; try { InetAddress addr = InetAddress.getLocalHost(); byte[] ipAddr = addr.getAddress(); portalIPAddress = "" + ipAddr[0] + ":" + ipAddr[1] + ":" + ipAddr[2] + ":" + ipAddr[3]; } catch (Exception e) { _log.error("Unable to get the portal IP address"); } // Data below should not used by portlets //String unameUTDB=appInit.sciGwyUserTrackingDB_Username; // Username //String passwdUTDB=appInit.sciGwyUserTrackingDB_Password; // Password //String dbnameUTDB=appInit.sciGwyUserTrackingDB_Database; // Database // Job details // Other job initialization settings MultiInfrastructureJobSubmission miJobSubmission = new MultiInfrastructureJobSubmission(); String inputFiles = ""; String inputFileName = ""; if (appInput.jobPID.length() > 1) { inputFiles = appServerPath + "molonFiles/URLParser.py,"; } else if (appInput.inputFile.length() > 1) { inputFiles = appInput.inputFile + ","; String[] inputFileNames = appInput.inputFile.split("/"); inputFileName = inputFileNames[inputFileNames.length - 1]; System.out.print("inputFile vale " + appInput.inputFile); System.out.print("inputFileNames vale " + inputFileNames); System.out.print("inputFile vale " + inputFileName); } inputFiles += appServerPath + "molonFiles/Molon.sh"; inputFiles += "," + appServerPath + "molonFiles/molon.cpp"; miJobSubmission.setExecutable("/usr/bin/env"); // Application executable if (appInput.jobPID.length() > 1) miJobSubmission.setArguments("sh Molon.sh PID " + appInput.jobPID); else if (appInput.inputURL.length() > 1) { String escapedURL = StringUtils.replace(appInput.inputURL, "(", "\\("); escapedURL = StringUtils.replace(escapedURL, ")", "\\)"); escapedURL = StringUtils.replace(escapedURL, "%", "\\%"); escapedURL = StringUtils.replace(escapedURL, "-", "\\-"); escapedURL = StringUtils.replace(escapedURL, "_", "\\_"); miJobSubmission.setArguments("sh Molon.sh URL " + escapedURL); //QUYIZA HAYA QUE PONER COMILLAS AQUI } else miJobSubmission.setArguments("sh Molon.sh FILE " + inputFileName); miJobSubmission.setOutputFiles("outputFile.txt"); // Hostname output files (created by the pilot script) miJobSubmission.setOutputPath("/tmp/"); // Output Path miJobSubmission.setJobOutput("molon-Output.txt"); // Distributed application standard output miJobSubmission.setJobError("molon-Error.txt"); // Distrubuted application standard error miJobSubmission.setInputFiles(inputFiles); // Submit Job //miJobSubmission.submitJobAsync(username, hostUTDB, applicationId, appInput.jobIdentifier); // JobCollection(java.lang.String commonName, java.lang.String description, java.lang.String outputPath, java.util.ArrayList<GEJobDescription> subJobDescriptions) // JobCollection collection = new JobCollection(appInput.username, appInput.jobIdentifier, "/tmp", tasksToExecute); for (InfrastructureInfo i : infrastructuresInfo) miJobSubmission.addInfrastructure(i); miJobSubmission.submitJobAsync(appInput.username, portalIPAddress, applicationId, appInput.jobIdentifier); // Show log // View jobSubmission details in the log _log.info("JobSent"); // _log.info } // numInfra > 0 else { _log.warn(LS + "There are no infrastructures configured; impossible to send any job" + LS + "Configure the application preferences in order to setup at least" + LS + "an infrastructure." + LS); } // numInfra == 0 } // submitJob void copyFile(FileItem input, String output) { try { //File f1 = new File(input); File f2 = new File(output); //InputStream in = new FileInputStream(f1); InputStream in = input.getInputStream(); //For Append the file. //OutputStream out = new FileOutputStream(f2,true); //For Overwrite the file. OutputStream out = new FileOutputStream(f2); byte[] buf = new byte[1024]; int len; while ((len = in.read(buf)) > 0) { out.write(buf, 0, len); } in.close(); out.close(); System.out.println("File copied."); } catch (FileNotFoundException ex) { System.out.println(ex.getMessage() + " in the specified directory."); } catch (IOException e) { System.out.println(e.getMessage()); } } } // molon_portlet