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/** * The software subject to this notice and license includes both human readable * source code form and machine readable, binary, object code form. The NCI OCR * Software was developed in conjunction with the National Cancer Institute * (NCI) by NCI employees and 5AM Solutions, Inc. (5AM). To the extent * government employees are authors, any rights in such works shall be subject * to Title 17 of the United States Code, section 105. * * This NCI OCR Software License (the License) is between NCI and You. You (or * Your) shall mean a person or an entity, and all other entities that control, * are controlled by, or are under common control with the entity. Control for * purposes of this definition means (i) the direct or indirect power to cause * the direction or management of such entity, whether by contract or otherwise, * or (ii) ownership of fifty percent (50%) or more of the outstanding shares, * or (iii) beneficial ownership of such entity. * * This License is granted provided that You agree to the conditions described * below. NCI grants You a non-exclusive, worldwide, perpetual, fully-paid-up, * no-charge, irrevocable, transferable and royalty-free right and license in * its rights in the NCI OCR Software to (i) use, install, access, operate, * execute, copy, modify, translate, market, publicly display, publicly perform, * and prepare derivative works of the NCI OCR Software; (ii) distribute and * have distributed to and by third parties the NCI OCR Software and any * modifications and derivative works thereof; and (iii) sublicense the * foregoing rights set out in (i) and (ii) to third parties, including the * right to license such rights to further third parties. For sake of clarity, * and not by way of limitation, NCI shall have no right of accounting or right * of payment from You or Your sub-licensees for the rights granted under this * License. This License is granted at no charge to You. * * Your redistributions of the source code for the Software must retain the * above copyright notice, this list of conditions and the disclaimer and * limitation of liability of Article 6, below. Your redistributions in object * code form must reproduce the above copyright notice, this list of conditions * and the disclaimer of Article 6 in the documentation and/or other materials * provided with the distribution, if any. * * Your end-user documentation included with the redistribution, if any, must * include the following acknowledgment: This product includes software * developed by 5AM and the National Cancer Institute. If You do not include * such end-user documentation, You shall include this acknowledgment in the * Software itself, wherever such third-party acknowledgments normally appear. * * You may not use the names "The National Cancer Institute", "NCI", or "5AM" * to endorse or promote products derived from this Software. This License does * not authorize You to use any trademarks, service marks, trade names, logos or * product names of either NCI or 5AM, except as required to comply with the * terms of this License. * * For sake of clarity, and not by way of limitation, You may incorporate this * Software into Your proprietary programs and into any third party proprietary * programs. However, if You incorporate the Software into third party * proprietary programs, You agree that You are solely responsible for obtaining * any permission from such third parties required to incorporate the Software * into such third party proprietary programs and for informing Your * sub-licensees, including without limitation Your end-users, of their * obligation to secure any required permissions from such third parties before * incorporating the Software into such third party proprietary software * programs. In the event that You fail to obtain such permissions, You agree * to indemnify NCI for any claims against NCI by such third parties, except to * the extent prohibited by law, resulting from Your failure to obtain such * permissions. * * For sake of clarity, and not by way of limitation, You may add Your own * copyright statement to Your modifications and to the derivative works, and * You may provide additional or different license terms and conditions in Your * sublicenses of modifications of the Software, or any derivative works of the * Software as a whole, provided Your use, reproduction, and distribution of the * Work otherwise complies with the conditions stated in this License. * * THIS SOFTWARE IS PROVIDED "AS IS," AND ANY EXPRESSED OR IMPLIED WARRANTIES, * (INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, * NON-INFRINGEMENT AND FITNESS FOR A PARTICULAR PURPOSE) ARE DISCLAIMED. IN NO * EVENT SHALL THE NATIONAL CANCER INSTITUTE, 5AM SOLUTIONS, INC. OR THEIR * AFFILIATES BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, * EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, * PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; * OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, * WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR * OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF * ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. */ package gov.nih.nci.firebird.web.action.investigator.profile; import com.google.common.base.Predicate; import com.google.common.collect.Iterables; import com.google.common.collect.Lists; import com.google.inject.Inject; import com.opensymphony.xwork2.Preparable; import gov.nih.nci.firebird.data.AbstractCredential; import gov.nih.nci.firebird.data.CredentialType; import gov.nih.nci.firebird.data.FirebirdFile; import gov.nih.nci.firebird.data.InvestigatorProfile; import gov.nih.nci.firebird.service.investigatorprofile.InvestigatorProfileService; import gov.nih.nci.firebird.web.action.FirebirdActionSupport; import gov.nih.nci.firebird.web.common.Struts2UploadedFileInfo; import org.apache.struts2.json.JSONException; import org.apache.struts2.json.JSONUtil; import java.util.ArrayList; import java.util.Date; import java.util.List; import java.util.Set; import java.util.regex.Matcher; import java.util.regex.Pattern; /** * Provides access to the current profile for actions that require a profile. */ public abstract class AbstractProfileAction extends FirebirdActionSupport implements Preparable { private static final long serialVersionUID = 1L; private final InvestigatorProfileService profileService; private InvestigatorProfile profile; /** * Initializes the instance. * * @param profileService the investigator profile service. */ @Inject protected AbstractProfileAction(InvestigatorProfileService profileService) { this.profileService = profileService; } /** * Action preparation -- note that subclasses that override must call <code>super.prepare()</code>. */ @Override public void prepare() { if (isProfileIdSet()) { setProfile(getProfileService().getById(getProfile().getId())); } else if (isUserAnInvestigator()) { setProfile(getCurrentUser().getInvestigatorRole().getProfile()); } else { setProfile(null); } } private boolean isProfileIdSet() { return getProfile() != null && getProfile().getId() != null; } private boolean isUserAnInvestigator() { return getCurrentUser() != null && getCurrentUser().getInvestigatorRole() != null; } /** * Returns the <code>InvestigatorProfile</code> the current user manages (if any). * * @return the profile */ public final InvestigatorProfile getProfile() { return profile; } /** * @param profile the profile to set */ public void setProfile(InvestigatorProfile profile) { this.profile = profile; } /** * @return the profile service */ protected final InvestigatorProfileService getProfileService() { return profileService; } /** * @return investigator profiles that may be managed by the current user if the user is a registration coordinator. */ public List<InvestigatorProfile> getManagedProfiles() { if (!getCurrentUser().isRegistrationCoordinator()) { throw new IllegalArgumentException("User does not have the Registration Coordinator Role"); } return getCurrentUser().getRegistrationCoordinatorRole().getApprovedManagedProfiles(); } /** * Returns whether or not the given effective date is before or equal to the expiration date. * * @param effectiveDate Effective Date * @param expirationDate Expiration Date * @return True if the effective date is before or equal to the expiration data, otherwise false. Returns false if * either date is null. */ protected boolean isEffectiveBeforeOrEqualToExpirationDate(Date effectiveDate, Date expirationDate) { return effectiveDate != null && expirationDate != null && effectiveDate.compareTo(expirationDate) >= 0; } /** * Validates that file being uploaded has a unique name. * * @param dataFile file being uploaded * @return boolean to indicate if file is valid (true) or invalid (false). Action Error * is added when the filename is invalid */ protected boolean validateFilename(final Struts2UploadedFileInfo dataFile) { if (getProfile() != null && doesFileAlreadyExist(dataFile)) { addActionError(getText("registration.attachments.upload.file.failed.duplicate")); return false; } return true; } private boolean doesFileAlreadyExist(final Struts2UploadedFileInfo dataFile) { return Iterables.any(getProfile().getUploadedFiles(), new Predicate<FirebirdFile>() { @Override public boolean apply(FirebirdFile firebirdFile) { return dataFile.getDataFileName().equalsIgnoreCase((firebirdFile).getName()); } }); } /** * * @param credentialType Type of Credential * @return the Set of credentials as a JSON Serialized String. * @throws JSONException in case of JSON Serialization error. */ protected String getCredentialJsonString(CredentialType credentialType) throws JSONException { Set<AbstractCredential<?>> credentials = getProfile().getCredentials(credentialType); ArrayList<Pattern> excludes = Lists.newArrayList(Pattern.compile(".*\\.byteDataSource"), Pattern.compile(".*\\.profile"), Pattern.compile(".*\\.roles")); return lookupProperties(JSONUtil.serialize(credentials, excludes, null, false, true, false)); } /** * Matches and Converts all Credential and Certificate properties in the JSON string. * @param json JSON * @return Converted JSON String */ protected String lookupProperties(String json) { Pattern pat = Pattern.compile("\"(credentials\\.certificate\\.type\\..*?)\""); Matcher match = pat.matcher(json); String ret = json; while (match.find()) { ret = ret.replace(match.group(1), getText(match.group(1))); } return ret; } }