Java tutorial
/** * The software subject to this notice and license includes both human readable * source code form and machine readable, binary, object code form. The NCI OCR * Software was developed in conjunction with the National Cancer Institute * (NCI) by NCI employees and 5AM Solutions, Inc. (5AM). To the extent * government employees are authors, any rights in such works shall be subject * to Title 17 of the United States Code, section 105. * * This NCI OCR Software License (the License) is between NCI and You. You (or * Your) shall mean a person or an entity, and all other entities that control, * are controlled by, or are under common control with the entity. Control for * purposes of this definition means (i) the direct or indirect power to cause * the direction or management of such entity, whether by contract or otherwise, * or (ii) ownership of fifty percent (50%) or more of the outstanding shares, * or (iii) beneficial ownership of such entity. * * This License is granted provided that You agree to the conditions described * below. NCI grants You a non-exclusive, worldwide, perpetual, fully-paid-up, * no-charge, irrevocable, transferable and royalty-free right and license in * its rights in the NCI OCR Software to (i) use, install, access, operate, * execute, copy, modify, translate, market, publicly display, publicly perform, * and prepare derivative works of the NCI OCR Software; (ii) distribute and * have distributed to and by third parties the NCI OCR Software and any * modifications and derivative works thereof; and (iii) sublicense the * foregoing rights set out in (i) and (ii) to third parties, including the * right to license such rights to further third parties. For sake of clarity, * and not by way of limitation, NCI shall have no right of accounting or right * of payment from You or Your sub-licensees for the rights granted under this * License. This License is granted at no charge to You. * * Your redistributions of the source code for the Software must retain the * above copyright notice, this list of conditions and the disclaimer and * limitation of liability of Article 6, below. Your redistributions in object * code form must reproduce the above copyright notice, this list of conditions * and the disclaimer of Article 6 in the documentation and/or other materials * provided with the distribution, if any. * * Your end-user documentation included with the redistribution, if any, must * include the following acknowledgment: This product includes software * developed by 5AM and the National Cancer Institute. If You do not include * such end-user documentation, You shall include this acknowledgment in the * Software itself, wherever such third-party acknowledgments normally appear. * * You may not use the names "The National Cancer Institute", "NCI", or "5AM" * to endorse or promote products derived from this Software. This License does * not authorize You to use any trademarks, service marks, trade names, logos or * product names of either NCI or 5AM, except as required to comply with the * terms of this License. * * For sake of clarity, and not by way of limitation, You may incorporate this * Software into Your proprietary programs and into any third party proprietary * programs. However, if You incorporate the Software into third party * proprietary programs, You agree that You are solely responsible for obtaining * any permission from such third parties required to incorporate the Software * into such third party proprietary programs and for informing Your * sub-licensees, including without limitation Your end-users, of their * obligation to secure any required permissions from such third parties before * incorporating the Software into such third party proprietary software * programs. In the event that You fail to obtain such permissions, You agree * to indemnify NCI for any claims against NCI by such third parties, except to * the extent prohibited by law, resulting from Your failure to obtain such * permissions. * * For sake of clarity, and not by way of limitation, You may add Your own * copyright statement to Your modifications and to the derivative works, and * You may provide additional or different license terms and conditions in Your * sublicenses of modifications of the Software, or any derivative works of the * Software as a whole, provided Your use, reproduction, and distribution of the * Work otherwise complies with the conditions stated in this License. * * THIS SOFTWARE IS PROVIDED "AS IS," AND ANY EXPRESSED OR IMPLIED WARRANTIES, * (INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, * NON-INFRINGEMENT AND FITNESS FOR A PARTICULAR PURPOSE) ARE DISCLAIMED. IN NO * EVENT SHALL THE NATIONAL CANCER INSTITUTE, 5AM SOLUTIONS, INC. OR THEIR * AFFILIATES BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, * EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, * PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; * OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, * WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR * OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF * ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. */ package gov.nih.nci.firebird.test.data; import gov.nih.nci.firebird.data.AbstractRegistrationForm; import gov.nih.nci.firebird.data.AnnualRegistration; import gov.nih.nci.firebird.data.AnnualRegistrationConfiguration; import gov.nih.nci.firebird.data.AnnualRegistrationType; import gov.nih.nci.firebird.data.ClinicalLaboratory; import gov.nih.nci.firebird.data.InvestigatorProfile; import gov.nih.nci.firebird.data.LaboratoryCertificate; import gov.nih.nci.firebird.data.LaboratoryCertificateType; import gov.nih.nci.firebird.data.Organization; import gov.nih.nci.firebird.data.OrganizationRoleType; import gov.nih.nci.firebird.data.RegistrationStatus; import gov.nih.nci.firebird.data.user.FirebirdUser; import gov.nih.nci.firebird.test.FirebirdFileFactory; import gov.nih.nci.firebird.test.nes.TargetGridResources; import java.util.Date; import java.util.EnumSet; import org.apache.commons.lang3.time.DateUtils; import org.hibernate.Hibernate; import com.google.common.collect.Iterables; public class AnnualRegistrationBuilder extends AbstractDataComponentBuilder<AnnualRegistration> { private static final EnumSet<RegistrationStatus> SUBMITTED_STATUSES = EnumSet.of(RegistrationStatus.SUBMITTED, RegistrationStatus.ACCEPTED, RegistrationStatus.APPROVED, RegistrationStatus.IN_REVIEW, RegistrationStatus.RETURNED, RegistrationStatus.REVIEW_ON_HOLD); private AnnualRegistration registration = new AnnualRegistration(); private final InvestigatorProfile profile; protected AnnualRegistrationBuilder(TargetGridResources gridResources, TestDataLoader dataLoader, FirebirdUser investigator, AnnualRegistrationConfiguration configuration) { super(gridResources, dataLoader); this.profile = Iterables.getFirst(investigator.getActiveProfiles(), null); registration.setProfile(profile); registration.setConfiguration(configuration); registration.configureForms(); withStatus(RegistrationStatus.IN_PROGRESS); withType(AnnualRegistrationType.INITIAL); withStatusDate(new Date()); } public AnnualRegistrationBuilder withType(AnnualRegistrationType type) { registration.setAnnualRegistrationType(type); return this; } public AnnualRegistrationBuilder withStatus(RegistrationStatus status) { if (SUBMITTED_STATUSES.contains(status)) { registration.setStatus(RegistrationStatus.SUBMITTED); // populate lastSubmittedDate withRenewalDate(DateUtils.addYears(new Date(), 1)); } registration.setStatus(status); return this; } public AnnualRegistrationBuilder withStatusDate(Date statusDate) { registration.setStatusDate(statusDate); return this; } public AnnualRegistrationBuilder withRenewalDate(Date renewalDate) { registration.setRenewalDate(renewalDate); return this; } public AnnualRegistrationBuilder withDueDate(Date dueDate) { registration.setDueDate(dueDate); return this; } public AnnualRegistrationBuilder withApprovalAcknowledged() { withApprovalAcknowledgedByInvestigator(); withApprovalAcknowledgedByCoordinator(); return this; } public AnnualRegistrationBuilder withApprovalAcknowledgedByInvestigator() { registration.setApprovalAcknowledgedByInvestigator(true); return this; } public AnnualRegistrationBuilder withApprovalAcknowledgedByCoordinator() { registration.setApprovalAcknowledgedByCoordinator(true); return this; } public AnnualRegistrationBuilder renewalOf(AnnualRegistration renewedRegistration) { withStatus(RegistrationStatus.IN_PROGRESS); withType(AnnualRegistrationType.RENEWAL); renewedRegistration.setRenewal(registration); withDueDate(renewedRegistration.getRenewalDate()); return this; } public AnnualRegistrationBuilder complete() { registration.getForm1572().setPhaseOne(true); registration.getForm1572().getPracticeSites() .add(getOrganizationWithRoleType(OrganizationRoleType.PRACTICE_SITE)); Organization clinicalLabOrg = getOrganizationWithRoleType(OrganizationRoleType.CLINICAL_LABORATORY); ClinicalLaboratory clinicalLab = (ClinicalLaboratory) clinicalLabOrg .getRole(OrganizationRoleType.CLINICAL_LABORATORY); LaboratoryCertificate cert = new LaboratoryCertificate(LaboratoryCertificateType.CAP); cert.setEffectiveDate(DateUtils.addYears(new Date(), -1)); cert.setExpirationDate(DateUtils.addYears(new Date(), 1)); cert.setCertificateFile(FirebirdFileFactory.getInstance().create()); clinicalLab.addCertificate(cert); registration.getForm1572().getLabs().add(clinicalLabOrg); registration.getForm1572().getIrbs().add(getOrganizationWithRoleType(OrganizationRoleType.IRB)); registration.getFinancialDisclosure().setEquityInSponsor(false); registration.getFinancialDisclosure().setFinancialInterest(false); registration.getFinancialDisclosure().setMonetaryGain(false); registration.getFinancialDisclosure().setOtherSponsorPayments(false); registration.getAdditionalAttachmentsForm().getAdditionalAttachments() .add(FirebirdFileFactory.getInstance().create()); return this; } private Organization getOrganizationWithRoleType(OrganizationRoleType roleType) { return profile.getOrganizationAssociations(roleType).iterator().next().getOrganizationRole() .getOrganization(); } @Override AnnualRegistration getObject() { return registration; } static void initialize(AnnualRegistration registration) { Hibernate.initialize(registration); if (registration.getAdditionalAttachmentsForm() != null) { Hibernate.initialize(registration.getAdditionalAttachmentsForm().getAdditionalAttachments()); } if (registration.getFinancialDisclosure() != null) { Hibernate.initialize(registration.getFinancialDisclosure().getSupportingDocumentation()); } if (registration.getForm1572() != null) { Hibernate.initialize(registration.getForm1572().getClinicalLabCertificates()); } Hibernate.initialize(registration.getSupplementalInvestigatorDataForm()); AnnualRegistrationConfigurationBuilder.initialize(registration.getConfiguration()); } @Override void setObject(AnnualRegistration registration) { this.registration = registration; } @Override protected void build() { super.build(); if (SUBMITTED_STATUSES.contains(registration.getStatus())) { addPdfFilesToForms(); setRenewalDateIfEmpty(); } } private void setRenewalDateIfEmpty() { if (registration.getRenewalDate() == null) { if (registration.getDueDate() != null) { withRenewalDate(DateUtils.addYears(registration.getDueDate(), 1)); } else { withRenewalDate(DateUtils.addYears(new Date(), 1)); } } } private void addPdfFilesToForms() { for (AbstractRegistrationForm form : registration.getForms()) { form.submitForm(); form.setFlattenedPdf(FirebirdFileFactory.getInstance().create()); form.setSignedPdf(FirebirdFileFactory.getInstance().create()); } } }