gov.nih.nci.cabig.caaers.service.migrator.EvaluateAndInitiateReportConverter.java Source code

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Here is the source code for gov.nih.nci.cabig.caaers.service.migrator.EvaluateAndInitiateReportConverter.java

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/*******************************************************************************
 * Copyright SemanticBits, Northwestern University and Akaza Research
 * 
 * Distributed under the OSI-approved BSD 3-Clause License.
 * See http://ncip.github.com/caaers/LICENSE.txt for details.
 ******************************************************************************/
package gov.nih.nci.cabig.caaers.service.migrator;

import com.aparzev.lang.StringUtils;
import gov.nih.nci.cabig.caaers.dao.StudyDao;
import gov.nih.nci.cabig.caaers.dao.report.ReportDefinitionDao;
import gov.nih.nci.cabig.caaers.domain.AdverseEvent;
import gov.nih.nci.cabig.caaers.domain.AdverseEventReportingPeriod;
import gov.nih.nci.cabig.caaers.domain.ExpeditedAdverseEventReport;
import gov.nih.nci.cabig.caaers.domain.report.Report;
import gov.nih.nci.cabig.caaers.integration.schema.saerules.EvaluateAndInitiateInputMessage;
import gov.nih.nci.cabig.caaers.integration.schema.saerules.RecommendedActions;
import gov.nih.nci.cabig.caaers.integration.schema.saerules.SaveAndEvaluateAEsOutputMessage;
import org.apache.commons.collections.CollectionUtils;
import org.apache.commons.lang.BooleanUtils;

import java.sql.Timestamp;
import java.util.ArrayList;
import java.util.List;

/**
 * @author Dirk Walter
 */

public class EvaluateAndInitiateReportConverter {
    private ReportDefinitionDao reportDefinitionDao;

    private ExpeditedAdverseEventReportConverterUtility utility = new ExpeditedAdverseEventReportConverterUtility();

    public void setStudyDao(StudyDao studyDao) {
        utility.setStudyDao(studyDao);
    }

    public ExpeditedAdverseEventReport convert(EvaluateAndInitiateInputMessage evaluateInputMessage,
            AdverseEventReportingPeriod repPeriod, SaveAndEvaluateAEsOutputMessage response) {
        Timestamp now = new Timestamp(System.currentTimeMillis());
        ExpeditedAdverseEventReport aeSrcReport = new ExpeditedAdverseEventReport();
        for (AdverseEvent adverseEvent : repPeriod.getAdverseEvents()) {
            if (isTrue(adverseEvent.getRequiresReporting())
                    || (!isTrue(adverseEvent.isRetired()) && isTrue(adverseEvent.getReported()))) {
                aeSrcReport.addAdverseEventUnidirectional(adverseEvent);
            }
        }
        aeSrcReport.setExternalId(evaluateInputMessage.getReportId());
        aeSrcReport.setReporter(utility.convertReporter(evaluateInputMessage.getReporter()));
        aeSrcReport.setPhysician(utility.convertPhysician(evaluateInputMessage.getPhysician()));
        aeSrcReport.setCreatedAt(now);
        aeSrcReport.setReportingPeriod(repPeriod);
        List<Report> reports = new ArrayList<Report>();
        aeSrcReport.setReports(reports);
        if (CollectionUtils.isNotEmpty(response.getRecommendedActions())) {
            for (RecommendedActions action : response.getRecommendedActions()) {
                Report report = new Report();
                report.setReportDefinition(reportDefinitionDao.getByName(action.getReport()));
                if (BooleanUtils.isTrue(evaluateInputMessage.isWithdrawReport())
                        || StringUtils.equalsIgnoreCase("Withdraw", action.getAction())) {
                    report.setWithdrawnOn(now);
                }

                report.setCaseNumber(evaluateInputMessage.getReportId());
                reports.add(report);
            }
        }

        return aeSrcReport;
    }

    private boolean isTrue(Boolean bool) {
        if (bool != null) {
            return bool.booleanValue();
        }
        return false;
    }

    public ReportDefinitionDao getReportDefinitionDao() {
        return reportDefinitionDao;
    }

    public void setReportDefinitionDao(ReportDefinitionDao reportDefinitionDao) {
        this.reportDefinitionDao = reportDefinitionDao;
    }

}