edu.sdsc.scigraph.owlapi.curies.CurieUtil.java Source code

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Here is the source code for edu.sdsc.scigraph.owlapi.curies.CurieUtil.java

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/**
 * Copyright (C) 2014 The SciGraph authors
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
package edu.sdsc.scigraph.owlapi.curies;

import static com.google.common.base.Preconditions.checkNotNull;

import java.util.Collection;
import java.util.Map;

import javax.inject.Inject;

import com.google.common.base.Optional;
import com.google.common.collect.ImmutableBiMap;

import edu.sdsc.scigraph.neo4j.bindings.IndicatesCurieMapping;

/***
 * Utilities for resolving CURIEs
 */
public class CurieUtil {

    private final ImmutableBiMap<String, String> curieMap;

    /***
     * @param curieMap A map from CURIE prefix to IRI prefix
     */
    @Inject
    public CurieUtil(@IndicatesCurieMapping Map<String, String> curieMap) {
        this.curieMap = ImmutableBiMap.copyOf(curieMap);
    }

    /***
     * @return all of the CURIE prefixes
     */
    public Collection<String> getPrefixes() {
        return curieMap.keySet();
    }

    /***
     * Expand a CURIE prefix to the corresponding IRI prefix.
     * 
     * @param curiePrefix
     * @return mapped IRI prefix
     */
    public String getExpansion(String curiePrefix) {
        return curieMap.get(curiePrefix);
    }

    /***
     * Returns the CURIE of an IRI, if mapped.
     * 
     * @param iri
     * @return An {@link Optional} CURIE
     */
    public Optional<String> getCurie(String iri) {
        checkNotNull(iri);
        Optional<String> candidate = Optional.absent();
        for (String prefix : curieMap.inverse().keySet()) {
            if (iri.startsWith(prefix) && candidate.or("").length() < prefix.length()) {
                candidate = Optional.of(prefix);
            }
        }
        if (candidate.isPresent()) {
            return Optional.of(String.format("%s:%s", curieMap.inverse().get(candidate.get()),
                    iri.substring(candidate.get().length(), iri.length())));
        } else {
            return Optional.absent();
        }
    }

    /***
     * Expands a CURIE to a full IRI, if mapped.
     * 
     * @param curie
     * @return an {@link Optional} IRI
     */
    public Optional<String> getIri(String curie) {
        String[] parts = checkNotNull(curie).split(":");
        if (parts.length > 1) {
            String prefix = parts[0];
            if (curieMap.containsKey(prefix)) {
                return Optional
                        .of(String.format("%s%s", curieMap.get(prefix), curie.substring(curie.indexOf(':') + 1)));
            }
        }
        return Optional.absent();
    }

}