edu.arizona.cs.hadoop.fs.irods.output.HirodsMultipleOutputs.java Source code

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/**
 * Licensed to the Apache Software Foundation (ASF) under one or more
 * contributor license agreements. See the NOTICE file distributed with this
 * work for additional information regarding copyright ownership. The ASF
 * licenses this file to you under the Apache License, Version 2.0 (the
 * "License"); you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 * http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS, WITHOUT
 * WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the
 * License for the specific language governing permissions and limitations under
 * the License.
 */
package edu.arizona.cs.hadoop.fs.irods.output;

import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.io.Writable;
import org.apache.hadoop.io.WritableComparable;
import org.apache.hadoop.mapreduce.*;
import org.apache.hadoop.util.ReflectionUtils;

import java.io.IOException;
import java.util.*;

/**
 * The MultipleOutputs class simplifies writing output data to multiple outputs
 *
 * <p>
 * Case one: writing to additional outputs other than the job default output.
 *
 * Each additional output, or named output, may be configured with its own
 * <code>OutputFormat</code>, with its own key class and with its own value
 * class.
 *
 * <p>
 * Case two: to write data to different files provided by user
 * </p>
 *
 * <p>
 * MultipleOutputs supports counters, by default they are disabled. The counters
 * group is the {@link MultipleOutputs} class name. The names of the counters
 * are the same as the output name. These count the number records written to
 * each output name.
 * </p>
 *
 * Usage pattern for job submission:
 * <pre>
 *
 * Job job = new Job();
 *
 * FileInputFormat.setInputPath(job, inDir);
 * FileOutputFormat.setOutputPath(job, outDir);
 *
 * job.setMapperClass(MOMap.class);
 * job.setReducerClass(MOReduce.class);
 * ...
 *
 * // Defines additional single text based output 'text' for the job
 * MultipleOutputs.addNamedOutput(job, "text", TextOutputFormat.class,
 * LongWritable.class, Text.class);
 *
 * // Defines additional sequence-file based output 'sequence' for the job
 * MultipleOutputs.addNamedOutput(job, "seq",
 *   SequenceFileOutputFormat.class,
 *   LongWritable.class, Text.class);
 * ...
 *
 * job.waitForCompletion(true);
 * ...
 * </pre>
 * <p>
 * Usage in Reducer:
 * <pre>
 * <K, V> String generateFileName(K k, V v) {
 *   return k.toString() + "_" + v.toString();
 * }
 *
 * public class MOReduce extends
 *   Reducer&lt;WritableComparable, Writable,WritableComparable, Writable&gt; {
 * private MultipleOutputs mos;
 * public void setup(Context context) {
 * ...
 * mos = new MultipleOutputs(context);
 * }
 *
 * public void reduce(WritableComparable key, Iterator&lt;Writable&gt; values,
 * Context context)
 * throws IOException {
 * ...
 * mos.write("text", , key, new Text("Hello"));
 * mos.write("seq", LongWritable(1), new Text("Bye"), "seq_a");
 * mos.write("seq", LongWritable(2), key, new Text("Chau"), "seq_b");
 * mos.write(key, new Text("value"), generateFileName(key, new Text("value")));
 * ...
 * }
 *
 * public void cleanup(Context) throws IOException {
 * mos.close();
 * ...
 * }
 *
 * }
 * </pre>
 */
public class HirodsMultipleOutputs<KEYOUT, VALUEOUT> {

    private static final String MULTIPLE_OUTPUTS = "edu.arizona.cs.hadoop.fs.irods.mapreduce.multipleoutputs";

    private static final String MO_PREFIX = "edu.arizona.cs.hadoop.fs.irods.mapreduce.multipleoutputs.namedOutput.";

    private static final String FORMAT = ".format";
    private static final String KEY = ".key";
    private static final String VALUE = ".value";
    private static final String COUNTERS_ENABLED = "edu.arizona.cs.hadoop.fs.irods.mapreduce.multipleoutputs.counters";

    /**
     * Counters group used by the counters of HirodsMultipleOutputs.
     */
    private static final String COUNTERS_GROUP = HirodsMultipleOutputs.class.getName();

    /**
     * Cache for the taskContexts
     */
    private Map<String, TaskAttemptContext> taskContexts = new HashMap<String, TaskAttemptContext>();

    /**
     * Checks if a named output name is valid token.
     *
     * @param namedOutput named output Name
     * @throws IllegalArgumentException if the output name is not valid.
     */
    private static void checkTokenName(String namedOutput) {
        if (namedOutput == null || namedOutput.length() == 0) {
            throw new IllegalArgumentException("Name cannot be NULL or emtpy");
        }
        for (char ch : namedOutput.toCharArray()) {
            if ((ch >= 'A') && (ch <= 'Z')) {
                continue;
            }
            if ((ch >= 'a') && (ch <= 'z')) {
                continue;
            }
            if ((ch >= '0') && (ch <= '9')) {
                continue;
            }
            throw new IllegalArgumentException("Name cannot be have a '" + ch + "' char");
        }
    }

    /**
     * Checks if output name is valid.
     *
     * name cannot be the name used for the default output
     *
     * @param outputPath base output Name
     * @throws IllegalArgumentException if the output name is not valid.
     */
    private static void checkBaseOutputPath(String outputPath) {
        if (outputPath.equals(HirodsFileOutputFormat.PART)) {
            throw new IllegalArgumentException("output name cannot be 'part'");
        }
    }

    /**
     * Checks if a named output name is valid.
     *
     * @param namedOutput named output Name
     * @throws IllegalArgumentException if the output name is not valid.
     */
    private static void checkNamedOutputName(JobContext job, String namedOutput, boolean alreadyDefined) {
        checkTokenName(namedOutput);
        checkBaseOutputPath(namedOutput);
        List<String> definedChannels = getNamedOutputsList(job);
        if (alreadyDefined && definedChannels.contains(namedOutput)) {
            throw new IllegalArgumentException("Named output '" + namedOutput + "' already alreadyDefined");
        } else if (!alreadyDefined && !definedChannels.contains(namedOutput)) {
            throw new IllegalArgumentException("Named output '" + namedOutput + "' not defined");
        }
    }

    // Returns list of channel names.
    private static List<String> getNamedOutputsList(JobContext job) {
        List<String> names = new ArrayList<String>();
        StringTokenizer st = new StringTokenizer(job.getConfiguration().get(MULTIPLE_OUTPUTS, ""), " ");
        while (st.hasMoreTokens()) {
            names.add(st.nextToken());
        }
        return names;
    }

    // Returns the named output OutputFormat.
    @SuppressWarnings("unchecked")
    private static Class<? extends OutputFormat<?, ?>> getNamedOutputFormatClass(JobContext job,
            String namedOutput) {
        return (Class<? extends OutputFormat<?, ?>>) job.getConfiguration()
                .getClass(MO_PREFIX + namedOutput + FORMAT, null, OutputFormat.class);
    }

    // Returns the key class for a named output.
    private static Class<?> getNamedOutputKeyClass(JobContext job, String namedOutput) {
        return job.getConfiguration().getClass(MO_PREFIX + namedOutput + KEY, null, WritableComparable.class);
    }

    // Returns the value class for a named output.
    private static Class<? extends Writable> getNamedOutputValueClass(JobContext job, String namedOutput) {
        return job.getConfiguration().getClass(MO_PREFIX + namedOutput + VALUE, null, Writable.class);
    }

    /**
     * Adds a named output for the job.
     * <p/>
     *
     * @param job job to add the named output
     * @param namedOutput named output name, it has to be a word, letters and
     * numbers only, cannot be the word 'part' as that is reserved for the
     * default output.
     * @param outputFormatClass OutputFormat class.
     * @param keyClass key class
     * @param valueClass value class
     */
    @SuppressWarnings("unchecked")
    public static void addNamedOutput(Job job, String namedOutput, Class<? extends OutputFormat> outputFormatClass,
            Class<?> keyClass, Class<?> valueClass) {
        checkNamedOutputName(job, namedOutput, true);
        Configuration conf = job.getConfiguration();
        conf.set(MULTIPLE_OUTPUTS, conf.get(MULTIPLE_OUTPUTS, "") + " " + namedOutput);
        conf.setClass(MO_PREFIX + namedOutput + FORMAT, outputFormatClass, OutputFormat.class);
        conf.setClass(MO_PREFIX + namedOutput + KEY, keyClass, Object.class);
        conf.setClass(MO_PREFIX + namedOutput + VALUE, valueClass, Object.class);
    }

    /**
     * Enables or disables counters for the named outputs.
     *
     * The counters group is the {@link MultipleOutputs} class name. The names
     * of the counters are the same as the named outputs. These counters count
     * the number records written to each output name. By default these counters
     * are disabled.
     *
     * @param job job to enable counters
     * @param enabled indicates if the counters will be enabled or not.
     */
    public static void setCountersEnabled(Job job, boolean enabled) {
        job.getConfiguration().setBoolean(COUNTERS_ENABLED, enabled);
    }

    /**
     * Returns if the counters for the named outputs are enabled or not. By
     * default these counters are disabled.
     *
     * @param job the job
     * @return TRUE if the counters are enabled, FALSE if they are disabled.
     */
    public static boolean getCountersEnabled(JobContext job) {
        return job.getConfiguration().getBoolean(COUNTERS_ENABLED, false);
    }

    /**
     * Wraps RecordWriter to increment counters.
     */
    @SuppressWarnings("unchecked")
    private static class RecordWriterWithCounter extends RecordWriter {

        private RecordWriter writer;
        private String counterName;
        private TaskInputOutputContext context;

        public RecordWriterWithCounter(RecordWriter writer, String counterName, TaskInputOutputContext context) {
            this.writer = writer;
            this.counterName = counterName;
            this.context = context;
        }

        @SuppressWarnings({ "unchecked" })
        public void write(Object key, Object value) throws IOException, InterruptedException {
            context.getCounter(COUNTERS_GROUP, counterName).increment(1);
            writer.write(key, value);
        }

        public void close(TaskAttemptContext context) throws IOException, InterruptedException {
            writer.close(context);
        }
    }

    // instance code, to be used from Mapper/Reducer code
    private TaskInputOutputContext<?, ?, KEYOUT, VALUEOUT> context;
    private Set<String> namedOutputs;
    private Map<String, RecordWriter<?, ?>> recordWriters;
    private boolean countersEnabled;

    /**
     * Creates and initializes multiple outputs support, it should be
     * instantiated in the Mapper/Reducer setup method.
     *
     * @param context the TaskInputOutputContext object
     */
    public HirodsMultipleOutputs(TaskInputOutputContext<?, ?, KEYOUT, VALUEOUT> context) {
        this.context = context;
        namedOutputs = Collections
                .unmodifiableSet(new HashSet<String>(HirodsMultipleOutputs.getNamedOutputsList(context)));
        recordWriters = new HashMap<String, RecordWriter<?, ?>>();
        countersEnabled = getCountersEnabled(context);
    }

    /**
     * Write key and value to the namedOutput.
     *
     * Output path is a unique file generated for the namedOutput. For example,
     * {namedOutput}-(m|r)-{part-number}
     *
     * @param namedOutput the named output name
     * @param key the key
     * @param value the value
     */
    @SuppressWarnings("unchecked")
    public <K, V> void write(String namedOutput, K key, V value) throws IOException, InterruptedException {
        write(namedOutput, key, value, namedOutput);
    }

    /**
     * Write key and value to baseOutputPath using the namedOutput.
     *
     * @param namedOutput the named output name
     * @param key the key
     * @param value the value
     * @param baseOutputPath base-output path to write the record to. Note:
     * Framework will generate unique filename for the baseOutputPath
     */
    @SuppressWarnings("unchecked")
    public <K, V> void write(String namedOutput, K key, V value, String baseOutputPath)
            throws IOException, InterruptedException {
        checkNamedOutputName(context, namedOutput, false);
        checkBaseOutputPath(baseOutputPath);
        if (!namedOutputs.contains(namedOutput)) {
            throw new IllegalArgumentException("Undefined named output '" + namedOutput + "'");
        }
        TaskAttemptContext taskContext = getContext(namedOutput);
        getRecordWriter(taskContext, baseOutputPath).write(key, value);
    }

    /**
     * Write key value to an output file name.
     *
     * Gets the record writer from job's output format. Job's output format
     * should be a FileOutputFormat.
     *
     * @param key the key
     * @param value the value
     * @param baseOutputPath base-output path to write the record to. Note:
     * Framework will generate unique filename for the baseOutputPath
     */
    @SuppressWarnings("unchecked")
    public void write(KEYOUT key, VALUEOUT value, String baseOutputPath) throws IOException, InterruptedException {
        checkBaseOutputPath(baseOutputPath);
        TaskAttemptContext taskContext = new TaskAttemptContext(context.getConfiguration(),
                context.getTaskAttemptID());
        getRecordWriter(taskContext, baseOutputPath).write(key, value);
    }

    // by being synchronized MultipleOutputTask can be use with a
    // MultithreadedMapper.
    @SuppressWarnings("unchecked")
    private synchronized RecordWriter getRecordWriter(TaskAttemptContext taskContext, String baseFileName)
            throws IOException, InterruptedException {

        // look for record-writer in the cache
        RecordWriter writer = recordWriters.get(baseFileName);

        // If not in cache, create a new one
        if (writer == null) {
            // get the record writer from context output format
            HirodsFileOutputFormat.setOutputName(taskContext, baseFileName);
            try {
                writer = ((OutputFormat) ReflectionUtils.newInstance(taskContext.getOutputFormatClass(),
                        taskContext.getConfiguration())).getRecordWriter(taskContext);
            } catch (ClassNotFoundException e) {
                throw new IOException(e);
            }

            // if counters are enabled, wrap the writer with context 
            // to increment counters 
            if (countersEnabled) {
                writer = new RecordWriterWithCounter(writer, baseFileName, context);
            }

            // add the record-writer to the cache
            recordWriters.put(baseFileName, writer);
        }
        return writer;
    }

    // Create a taskAttemptContext for the named output with 
    // output format and output key/value types put in the context
    private TaskAttemptContext getContext(String nameOutput) throws IOException {

        TaskAttemptContext taskContext = taskContexts.get(nameOutput);

        if (taskContext != null) {
            return taskContext;
        }

        // The following trick leverages the instantiation of a record writer via
        // the job thus supporting arbitrary output formats.
        Job job = new Job(context.getConfiguration());
        job.setOutputFormatClass(getNamedOutputFormatClass(context, nameOutput));
        job.setOutputKeyClass(getNamedOutputKeyClass(context, nameOutput));
        job.setOutputValueClass(getNamedOutputValueClass(context, nameOutput));
        taskContext = new TaskAttemptContext(job.getConfiguration(), context.getTaskAttemptID());

        taskContexts.put(nameOutput, taskContext);

        return taskContext;
    }

    /**
     * Closes all the opened outputs.
     *
     * This should be called from cleanup method of map/reduce task. If
     * overridden subclasses must invoke <code>super.close()</code> at the end
     * of their <code>close()</code>
     *
     */
    @SuppressWarnings("unchecked")
    public void close() throws IOException, InterruptedException {
        for (RecordWriter writer : recordWriters.values()) {
            writer.close(context);
        }
    }
}