Java tutorial
/** * Licensed to the Apache Software Foundation (ASF) under one or more * contributor license agreements. See the NOTICE file distributed with this * work for additional information regarding copyright ownership. The ASF * licenses this file to you under the Apache License, Version 2.0 (the * "License"); you may not use this file except in compliance with the License. * You may obtain a copy of the License at * * http://www.apache.org/licenses/LICENSE-2.0 * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, WITHOUT * WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the * License for the specific language governing permissions and limitations under * the License. */ package edu.arizona.cs.hadoop.fs.irods.output; import java.io.IOException; import org.apache.hadoop.fs.Path; import edu.arizona.cs.hadoop.fs.irods.util.HirodsConfigUtils; import java.text.NumberFormat; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.apache.hadoop.conf.Configuration; import org.apache.hadoop.io.compress.CompressionCodec; import org.apache.hadoop.mapred.FileAlreadyExistsException; import org.apache.hadoop.mapred.InvalidJobConfException; import org.apache.hadoop.mapreduce.Job; import org.apache.hadoop.mapreduce.JobContext; import org.apache.hadoop.mapreduce.OutputCommitter; import org.apache.hadoop.mapreduce.OutputFormat; import org.apache.hadoop.mapreduce.RecordWriter; import org.apache.hadoop.mapreduce.TaskAttemptContext; import org.apache.hadoop.mapreduce.TaskID; import org.apache.hadoop.mapreduce.TaskInputOutputContext; import org.apache.hadoop.mapreduce.security.TokenCache; /** * A base class for {@link OutputFormat}s that read from {@link FileSystem}s. */ public abstract class HirodsFileOutputFormat<K, V> extends OutputFormat<K, V> { private static final Log LOG = LogFactory.getLog(HirodsFileOutputFormat.class); /** * Construct output file names so that, when an output directory listing is * sorted lexicographically, positions correspond to output partitions. */ private static final NumberFormat NUMBER_FORMAT = NumberFormat.getInstance(); protected static final String BASE_OUTPUT_NAME = "edu.arizona.cs.hadoop.fs.irods.mapreduce.output.basename"; protected static final String PART = "part"; static { NUMBER_FORMAT.setMinimumIntegerDigits(5); NUMBER_FORMAT.setGroupingUsed(false); } private HirodsFileOutputCommitter committer = null; /** * Set whether the output of the job is compressed. * * @param job the job to modify * @param compress should the output of the job be compressed? */ public static void setCompressOutput(Job job, boolean compress) { job.getConfiguration().setBoolean("edu.arizona.cs.hadoop.fs.irods.mapred.output.compress", compress); } /** * Is the job output compressed? * * @param job the Job to look in * @return <code>true</code> if the job output should be compressed, * <code>false</code> otherwise */ public static boolean getCompressOutput(JobContext job) { return job.getConfiguration().getBoolean("edu.arizona.cs.hadoop.fs.irods.mapred.output.compress", false); } /** * Set the {@link CompressionCodec} to be used to compress job outputs. * * @param job the job to modify * @param codecClass the {@link CompressionCodec} to be used to compress the * job outputs */ public static void setOutputCompressorClass(Job job, Class<? extends CompressionCodec> codecClass) { setCompressOutput(job, true); job.getConfiguration().setClass("edu.arizona.cs.hadoop.fs.irods.mapred.output.compression.codec", codecClass, CompressionCodec.class); } /** * Get the {@link CompressionCodec} for compressing the job outputs. * * @param job the {@link Job} to look in * @param defaultValue the {@link CompressionCodec} to return if not set * @return the {@link CompressionCodec} to be used to compress the job * outputs * @throws IllegalArgumentException if the class was specified, but not * found */ public static Class<? extends CompressionCodec> getOutputCompressorClass(JobContext job, Class<? extends CompressionCodec> defaultValue) { Class<? extends CompressionCodec> codecClass = defaultValue; Configuration conf = job.getConfiguration(); String name = conf.get("edu.arizona.cs.hadoop.fs.irods.mapred.output.compression.codec"); if (name != null) { try { codecClass = conf.getClassByName(name).asSubclass(CompressionCodec.class); } catch (ClassNotFoundException e) { throw new IllegalArgumentException("Compression codec " + name + " was not found.", e); } } return codecClass; } public abstract RecordWriter<K, V> getRecordWriter(TaskAttemptContext job) throws IOException, InterruptedException; public void checkOutputSpecs(JobContext job) throws FileAlreadyExistsException, IOException { // Ensure that the output directory is set and not already there Path outDir = getOutputPath(job); if (outDir == null) { throw new InvalidJobConfException("Output directory not set."); } // get delegation token for outDir's file system TokenCache.obtainTokensForNamenodes(job.getCredentials(), new Path[] { outDir }, job.getConfiguration()); if (outDir.getFileSystem(job.getConfiguration()).exists(outDir)) { throw new FileAlreadyExistsException("Output directory " + outDir + " already exists"); } } /** * Set the {@link Path} of the output directory for the map-reduce job. * * @param job The job to modify * @param outputDir the {@link Path} of the output directory for the * map-reduce job. */ public static void setOutputPath(Job job, Path outputDir) { job.getConfiguration().set("edu.arizona.cs.hadoop.fs.irods.mapred.output.dir", outputDir.toString()); } /** * Get the {@link Path} to the output directory for the map-reduce job. * * @return the {@link Path} to the output directory for the map-reduce job. * @see HirodsFileOutputFormat#getWorkOutputPath(TaskInputOutputContext) */ public static Path getOutputPath(JobContext job) { String name = job.getConfiguration().get("edu.arizona.cs.hadoop.fs.irods.mapred.output.dir"); return name == null ? null : new Path(name); } public static void setTempPath(Job job, Path outputDir) { HirodsConfigUtils.setIrodsOutputBufferedPath(job.getConfiguration(), outputDir.toString()); } public static Path getTempPath(JobContext job) { String name = HirodsConfigUtils.getIrodsOutputBufferedPath(job.getConfiguration()); return name == null ? null : new Path(name); } /** * Get the {@link Path} to the task's temporary output directory for the * map-reduce job * * <h4 id="SideEffectFiles">Tasks' Side-Effect Files</h4> * * <p> * Some applications need to create/write-to side-files, which differ from * the actual job-outputs. * * <p> * In such cases there could be issues with 2 instances of the same TIP * (running simultaneously e.g. speculative tasks) trying to open/write-to * the same file (path) on HDFS. Hence the application-writer will have to * pick unique names per task-attempt (e.g. using the attemptid, say * <tt>attempt_200709221812_0001_m_000000_0</tt>), not just per TIP.</p> * * <p> * To get around this the Map-Reduce framework helps the application-writer * out by maintaining a special * <tt>${mapred.output.dir}/_temporary/_${taskid}</tt> * sub-directory for each task-attempt on HDFS where the output of the * task-attempt goes. On successful completion of the task-attempt the files * in the <tt>${mapred.output.dir}/_temporary/_${taskid}</tt> (only) are * <i>promoted</i> to <tt>${mapred.output.dir}</tt>. Of course, the * framework discards the sub-directory of unsuccessful task-attempts. This * is completely transparent to the application.</p> * * <p> * The application-writer can take advantage of this by creating any * side-files required in a work directory during execution of his task i.e. * via {@link #getWorkOutputPath(TaskInputOutputContext)}, and the framework * will move them out similarly - thus she doesn't have to pick unique paths * per task-attempt.</p> * * <p> * The entire discussion holds true for maps of jobs with reducer=NONE (i.e. * 0 reduces) since output of the map, in that case, goes directly to * HDFS.</p> * * @return the {@link Path} to the task's temporary output directory for the * map-reduce job. */ public static Path getWorkOutputPath(TaskInputOutputContext<?, ?, ?, ?> context) throws IOException, InterruptedException { HirodsFileOutputCommitter committer = (HirodsFileOutputCommitter) context.getOutputCommitter(); return committer.getWorkPath(); } /** * Helper function to generate a {@link Path} for a file that is unique for * the task within the job output directory. * * <p> * The path can be used to create custom files from within the map and * reduce tasks. The path name will be unique for each task. The path parent * will be the job output directory.</p>ls * * <p> * This method uses the {@link #getUniqueFile} method to make the file name * unique for the task.</p> * * @param context the context for the task. * @param name the name for the file. * @param extension the extension for the file * @return a unique path accross all tasks of the job. */ public static Path getPathForWorkFile(TaskInputOutputContext<?, ?, ?, ?> context, String name, String extension) throws IOException, InterruptedException { return new Path(getWorkOutputPath(context), getUniqueFile(context, name, extension)); } /** * Generate a unique filename, based on the task id, name, and extension * * @param context the task that is calling this * @param name the base filename * @param extension the filename extension * @return a string like $name-[mr]-$id$extension */ public synchronized static String getUniqueFile(TaskAttemptContext context, String name, String extension) { TaskID taskId = context.getTaskAttemptID().getTaskID(); int partition = taskId.getId(); StringBuilder result = new StringBuilder(); result.append(name); result.append('-'); result.append(taskId.isMap() ? 'm' : 'r'); result.append('-'); result.append(NUMBER_FORMAT.format(partition)); result.append(extension); return result.toString(); } /** * Get the default path and filename for the output format. * * @param context the task context * @param extension an extension to add to the filename * @return a full path $output/_temporary/$taskid/part-[mr]-$id * @throws IOException */ public Path getDefaultWorkFile(TaskAttemptContext context, String extension) throws IOException { HirodsFileOutputCommitter committer = (HirodsFileOutputCommitter) getOutputCommitter(context); return new Path(committer.getWorkPath(), getUniqueFile(context, getOutputName(context), extension)); } /** * Get the base output name for the output file. */ protected static String getOutputName(JobContext job) { return job.getConfiguration().get(BASE_OUTPUT_NAME, PART); } /** * Set the base output name for output file to be created. */ protected static void setOutputName(JobContext job, String name) { job.getConfiguration().set(BASE_OUTPUT_NAME, name); } public synchronized OutputCommitter getOutputCommitter(TaskAttemptContext context) throws IOException { if (this.committer == null) { Path output = getOutputPath(context); Path temp = getTempPath(context); this.committer = new HirodsFileOutputCommitter(output, temp, context); } return this.committer; } }