com.run.mapred.hbase2tsv.HFileInputFormat_mr1.java Source code

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/**
 * Licensed to the Apache Software Foundation (ASF) under one
 * or more contributor license agreements.  See the NOTICE file
 * distributed with this work for additional information
 * regarding copyright ownership.  The ASF licenses this file
 * to you under the Apache License, Version 2.0 (the
 * "License"); you may not use this file except in compliance
 * with the License.  You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
package com.run.mapred.hbase2tsv;

import java.io.IOException;
import java.util.ArrayList;
import java.util.List;

import org.apache.commons.codec.DecoderException;
import org.apache.commons.codec.binary.Hex;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FileStatus;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.fs.PathFilter;
import org.apache.hadoop.hbase.KeyValue;
import org.apache.hadoop.hbase.Tag;
import org.apache.hadoop.hbase.io.hfile.CacheConfig;
import org.apache.hadoop.hbase.io.hfile.HFile;
import org.apache.hadoop.hbase.io.hfile.HFile.Reader;
import org.apache.hadoop.hbase.io.hfile.HFileScanner;
import org.apache.hadoop.hbase.util.Bytes;
import org.apache.hadoop.io.NullWritable;
import org.apache.hadoop.mapreduce.InputSplit;
import org.apache.hadoop.mapreduce.JobContext;
import org.apache.hadoop.mapreduce.RecordReader;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat;
import org.apache.hadoop.mapreduce.lib.input.FileSplit;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

import com.google.common.collect.ImmutableList;

/**
 * Simple input format for HFiles.
 */
public class HFileInputFormat_mr1 extends FileInputFormat<NullWritable, KeyValue> {

    private static final Logger LOG = LoggerFactory.getLogger(HFileInputFormat_mr1.class);
    static final String START_ROW_KEY = "crunch.hbase.hfile.input.format.start.row";
    static final String STOP_ROW_KEY = "crunch.hbase.hfile.input.format.stop.row";

    /**
     * File filter that removes all "hidden" files. This might be something worth removing from
     * a more general purpose utility; it accounts for the presence of metadata files created
     * in the way we're doing exports.
     */
    static final PathFilter HIDDEN_FILE_FILTER = new PathFilter() {
        public boolean accept(Path p) {
            String name = p.getName();
            return !name.startsWith("_") && !name.startsWith(".");
        }
    };

    /**
     * Record reader for HFiles.
     */
    private static class HFileRecordReader extends RecordReader<NullWritable, KeyValue> {

        private Reader in;
        protected Configuration conf;
        private HFileScanner scanner;

        /**
         * A private cache of the key value so it doesn't need to be loaded twice from the scanner.
         */
        private KeyValue value = null;
        private byte[] startRow = null;
        private byte[] stopRow = null;
        private boolean reachedStopRow = false;
        private long count;
        private boolean seeked = false;

        @Override
        public void initialize(InputSplit split, TaskAttemptContext context)
                throws IOException, InterruptedException {
            FileSplit fileSplit = (FileSplit) split;
            conf = context.getConfiguration();
            Path path = fileSplit.getPath();
            FileSystem fs = path.getFileSystem(conf);
            LOG.info("Initialize HFileRecordReader for {}", path);
            this.in = HFile.createReader(fs, path, new CacheConfig(conf), conf);

            // The file info must be loaded before the scanner can be used.
            // This seems like a bug in HBase, but it's easily worked around.
            this.in.loadFileInfo();
            this.scanner = in.getScanner(false, false);

            String startRowStr = conf.get(START_ROW_KEY);
            if (startRowStr != null) {
                this.startRow = decodeHexOrDie(startRowStr);
            }
            String stopRowStr = conf.get(STOP_ROW_KEY);
            if (stopRowStr != null) {
                this.stopRow = decodeHexOrDie(stopRowStr);
            }
        }

        private static byte[] decodeHexOrDie(String s) {
            try {
                return Hex.decodeHex(s.toCharArray());
            } catch (DecoderException e) {
                throw new AssertionError("Failed to decode hex string: " + s);
            }
        }

        @Override
        public boolean nextKeyValue() throws IOException, InterruptedException {
            if (reachedStopRow) {
                return false;
            }
            boolean hasNext;
            if (!seeked) {
                if (startRow != null) {
                    if (LOG.isInfoEnabled()) {
                        LOG.info("Seeking to start row {}", Bytes.toStringBinary(startRow));
                    }
                    KeyValue kv = KeyValue.createFirstOnRow(startRow);
                    hasNext = seekAtOrAfter(scanner, kv);
                } else {
                    LOG.info("Seeking to start");
                    hasNext = scanner.seekTo();
                }
                seeked = true;
            } else {
                hasNext = scanner.next();
            }
            if (!hasNext) {
                return false;
            }
            value = KeyValue.cloneAndAddTags(scanner.getKeyValue(), ImmutableList.<Tag>of());
            if (stopRow != null && Bytes.compareTo(value.getRowArray(), value.getRowOffset(), value.getRowLength(),
                    stopRow, 0, stopRow.length) >= 0) {
                if (LOG.isInfoEnabled()) {
                    LOG.info("Reached stop row {}", Bytes.toStringBinary(stopRow));
                }
                reachedStopRow = true;
                value = null;
                return false;
            }
            count++;
            return true;
        }

        @Override
        public NullWritable getCurrentKey() throws IOException, InterruptedException {
            return NullWritable.get();
        }

        @Override
        public KeyValue getCurrentValue() throws IOException, InterruptedException {
            return value;
        }

        @Override
        public float getProgress() throws IOException, InterruptedException {
            // This would be inaccurate if KVs are not uniformly-sized or we
            // have performed a seek to
            // the start row, but better than nothing anyway.
            return 1.0f * count / in.getEntries();
        }

        @Override
        public void close() throws IOException {
            if (in != null) {
                in.close();
                in = null;
            }
        }

        // This method is copied from o.a.h.hbase.regionserver.StoreFileScanner,
        // as we don't want
        // to depend on it.
        private static boolean seekAtOrAfter(HFileScanner s, KeyValue k) throws IOException {
            int result = s.seekTo(k);
            if (result < 0) {
                // Passed KV is smaller than first KV in file, work from start
                // of file
                return s.seekTo();
            } else if (result > 0) {
                // Passed KV is larger than current KV in file, if there is a
                // next
                // it is the "after", if not then this scanner is done.
                return s.next();
            }
            // Seeked to the exact key
            return true;
        }
    }

    @Override
    protected List<FileStatus> listStatus(JobContext job) throws IOException {
        List<FileStatus> result = new ArrayList<FileStatus>();

        // Explode out directories that match the original FileInputFormat
        // filters since HFiles are written to directories where the
        // directory name is the column name
        for (FileStatus status : super.listStatus(job)) {
            if (status.isDirectory()) {
                FileSystem fs = status.getPath().getFileSystem(job.getConfiguration());
                for (FileStatus match : fs.listStatus(status.getPath(), HIDDEN_FILE_FILTER)) {
                    result.add(match);
                }
            } else {
                result.add(status);
            }
        }

        return result;
    }

    @Override
    public RecordReader<NullWritable, KeyValue> createRecordReader(InputSplit split, TaskAttemptContext context)
            throws IOException, InterruptedException {
        return new HFileRecordReader();
    }

    @Override
    protected boolean isSplitable(JobContext context, Path filename) {
        // This file isn't splittable.
        return false;
    }
}