com.bianfeng.bfas.hive.io.RealtimeInputFormat2.java Source code

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/**
 * Licensed to the Apache Software Foundation (ASF) under one
 * or more contributor license agreements.  See the NOTICE file
 * distributed with this work for additional information
 * regarding copyright ownership.  The ASF licenses this file
 * to you under the Apache License, Version 2.0 (the
 * "License"); you may not use this file except in compliance
 * with the License.  You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */

package com.bianfeng.bfas.hive.io;

import java.io.IOException;
import java.util.ArrayList;
import java.util.Collections;
import java.util.Comparator;
import java.util.HashSet;
import java.util.IdentityHashMap;
import java.util.LinkedList;
import java.util.List;
import java.util.Map;
import java.util.Set;

import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.hadoop.fs.BlockLocation;
import org.apache.hadoop.fs.FileStatus;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.fs.PathFilter;
import org.apache.hadoop.io.LongWritable;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.io.compress.CompressionCodec;
import org.apache.hadoop.io.compress.CompressionCodecFactory;
import org.apache.hadoop.io.compress.SplittableCompressionCodec;
import org.apache.hadoop.mapred.FileSplit;
import org.apache.hadoop.mapred.InputFormat;
import org.apache.hadoop.mapred.InputSplit;
import org.apache.hadoop.mapred.InvalidInputException;
import org.apache.hadoop.mapred.JobConf;
import org.apache.hadoop.mapred.JobConfigurable;
import org.apache.hadoop.mapred.LineRecordReader;
import org.apache.hadoop.mapred.RecordReader;
import org.apache.hadoop.mapred.Reporter;
import org.apache.hadoop.mapreduce.security.TokenCache;
import org.apache.hadoop.net.NetworkTopology;
import org.apache.hadoop.net.Node;
import org.apache.hadoop.net.NodeBase;
import org.apache.hadoop.util.ReflectionUtils;
import org.apache.hadoop.util.StringUtils;

/** 
 * A base class for file-based {@link InputFormat}.
 * 
 * <p><code>FileInputFormat</code> is the base class for all file-based 
 * <code>InputFormat</code>s. This provides a generic implementation of
 * {@link #getSplits(JobConf, int)}.
 * Subclasses of <code>FileInputFormat</code> can also override the 
 * {@link #isSplitable(FileSystem, Path)} method to ensure input-files are
 * not split-up and are processed as a whole by {@link Mapper}s.
 */
public class RealtimeInputFormat2 implements InputFormat<LongWritable, Text>, JobConfigurable {

    private CompressionCodecFactory compressionCodecs = null;

    public void configure(JobConf conf) {
        compressionCodecs = new CompressionCodecFactory(conf);
    }

    protected boolean isSplitable(FileSystem fs, Path file) {
        final CompressionCodec codec = compressionCodecs.getCodec(file);
        if (null == codec) {
            return true;
        }
        return codec instanceof SplittableCompressionCodec;
    }

    public RecordReader<LongWritable, Text> getRecordReader(InputSplit genericSplit, JobConf job, Reporter reporter)
            throws IOException {

        reporter.setStatus(genericSplit.toString());
        String delimiter = job.get("textinputformat.record.delimiter");
        byte[] recordDelimiterBytes = null;
        if (null != delimiter)
            recordDelimiterBytes = delimiter.getBytes();
        return new LineRecordReader(job, (FileSplit) genericSplit, recordDelimiterBytes);
    }

    public static final Log LOG = LogFactory.getLog(RealtimeInputFormat2.class);

    private static final double SPLIT_SLOP = 1.1; // 10% slop

    private long minSplitSize = 1;
    private static final PathFilter hiddenFileFilter = new PathFilter() {
        public boolean accept(Path p) {
            String name = p.getName();
            return !name.startsWith("_") && !name.startsWith(".");
        }
    };

    static final String NUM_INPUT_FILES = "mapreduce.input.num.files";

    protected void setMinSplitSize(long minSplitSize) {
        this.minSplitSize = minSplitSize;
    }

    /**
     * Proxy PathFilter that accepts a path only if all filters given in the
     * constructor do. Used by the listPaths() to apply the built-in
     * hiddenFileFilter together with a user provided one (if any).
     */
    private static class MultiPathFilter implements PathFilter {
        private List<PathFilter> filters;

        public MultiPathFilter(List<PathFilter> filters) {
            this.filters = filters;
        }

        public boolean accept(Path path) {
            for (PathFilter filter : filters) {
                if (!filter.accept(path)) {
                    return false;
                }
            }
            return true;
        }
    }

    /**
     * Set a PathFilter to be applied to the input paths for the map-reduce job.
     *
     * @param filter the PathFilter class use for filtering the input paths.
     */
    public static void setInputPathFilter(JobConf conf, Class<? extends PathFilter> filter) {
        conf.setClass("mapred.input.pathFilter.class", filter, PathFilter.class);
    }

    /**
     * Get a PathFilter instance of the filter set for the input paths.
     *
     * @return the PathFilter instance set for the job, NULL if none has been set.
     */
    public static PathFilter getInputPathFilter(JobConf conf) {
        Class<? extends PathFilter> filterClass = conf.getClass("mapred.input.pathFilter.class", null,
                PathFilter.class);
        return (filterClass != null) ? ReflectionUtils.newInstance(filterClass, conf) : null;
    }

    /** List input directories.
     * Subclasses may override to, e.g., select only files matching a regular
     * expression. 
     * 
     * @param job the job to list input paths for
     * @return array of FileStatus objects
     * @throws IOException if zero items.
     */
    protected FileStatus[] listStatus(JobConf job) throws IOException {
        Path[] dirs = getInputPaths(job);
        if (dirs.length == 0) {
            throw new IOException("No input paths specified in job");
        }

        // get tokens for all the required FileSystems..
        TokenCache.obtainTokensForNamenodes(job.getCredentials(), dirs, job);

        List<FileStatus> result = new ArrayList<FileStatus>();
        List<IOException> errors = new ArrayList<IOException>();

        // creates a MultiPathFilter with the hiddenFileFilter and the
        // user provided one (if any).
        List<PathFilter> filters = new ArrayList<PathFilter>();
        filters.add(hiddenFileFilter);
        PathFilter jobFilter = getInputPathFilter(job);
        if (jobFilter != null) {
            filters.add(jobFilter);
        }
        PathFilter inputFilter = new MultiPathFilter(filters);

        for (Path p : dirs) {
            FileSystem fs = p.getFileSystem(job);
            FileStatus[] matches = fs.globStatus(p, inputFilter);
            if (matches == null) {
                errors.add(new IOException("Input path does not exist: " + p));
            } else if (matches.length == 0) {
                errors.add(new IOException("Input Pattern " + p + " matches 0 files"));
            } else {
                for (FileStatus globStat : matches) {
                    if (globStat.isDir()) {
                        for (FileStatus stat : fs.listStatus(globStat.getPath(), inputFilter)) {
                            result.add(stat);
                        }
                    } else {
                        result.add(globStat);
                    }
                }
            }
        }

        if (!errors.isEmpty()) {
            throw new InvalidInputException(errors);
        }
        LOG.info("Total input paths to process : " + result.size());
        return result.toArray(new FileStatus[result.size()]);
    }

    /** Splits files returned by {@link #listStatus(JobConf)} when
     * they're too big.*/
    @SuppressWarnings("deprecation")
    public InputSplit[] getSplits(JobConf job, int numSplits) throws IOException {
        LOG.warn("test go go go");

        FileStatus[] files = listStatus(job);

        // Save the number of input files in the job-conf
        job.setLong(NUM_INPUT_FILES, files.length);
        long totalSize = 0; // compute total size
        for (FileStatus file : files) { // check we have valid files
            if (file.isDir()) {
                throw new IOException("Not a file: " + file.getPath());
            }
            totalSize += file.getLen();
        }

        long goalSize = totalSize / (numSplits == 0 ? 1 : numSplits);
        long minSize = Math.max(job.getLong("mapred.min.split.size", 1), minSplitSize);

        // generate splits
        ArrayList<FileSplit> splits = new ArrayList<FileSplit>(numSplits);
        NetworkTopology clusterMap = new NetworkTopology();
        for (FileStatus file : files) {
            Path path = file.getPath();
            FileSystem fs = path.getFileSystem(job);
            long length = file.getLen();
            BlockLocation[] blkLocations = fs.getFileBlockLocations(file, 0, length);
            if ((length != 0) && isSplitable(fs, path)) {
                long blockSize = file.getBlockSize();
                long splitSize = computeSplitSize(goalSize, minSize, blockSize);

                long bytesRemaining = length;
                while (((double) bytesRemaining) / splitSize > SPLIT_SLOP) {
                    String[] splitHosts = getSplitHosts(blkLocations, length - bytesRemaining, splitSize,
                            clusterMap);
                    splits.add(new FileSplit(path, length - bytesRemaining, splitSize, splitHosts));
                    bytesRemaining -= splitSize;
                }

                if (bytesRemaining != 0) {
                    splits.add(new FileSplit(path, length - bytesRemaining, bytesRemaining,
                            blkLocations[blkLocations.length - 1].getHosts()));
                }
            } else if (length != 0) {
                String[] splitHosts = getSplitHosts(blkLocations, 0, length, clusterMap);
                splits.add(new FileSplit(path, 0, length, splitHosts));
            } else {
                //Create empty hosts array for zero length files
                splits.add(new FileSplit(path, 0, length, new String[0]));
            }
        }
        LOG.debug("Total # of splits: " + splits.size());
        return splits.toArray(new FileSplit[splits.size()]);
    }

    protected long computeSplitSize(long goalSize, long minSize, long blockSize) {
        return Math.max(minSize, Math.min(goalSize, blockSize));
    }

    protected int getBlockIndex(BlockLocation[] blkLocations, long offset) {
        for (int i = 0; i < blkLocations.length; i++) {
            // is the offset inside this block?
            if ((blkLocations[i].getOffset() <= offset)
                    && (offset < blkLocations[i].getOffset() + blkLocations[i].getLength())) {
                return i;
            }
        }
        BlockLocation last = blkLocations[blkLocations.length - 1];
        long fileLength = last.getOffset() + last.getLength() - 1;
        throw new IllegalArgumentException("Offset " + offset + " is outside of file (0.." + fileLength + ")");
    }

    /**
     * Sets the given comma separated paths as the list of inputs 
     * for the map-reduce job.
     * 
     * @param conf Configuration of the job
     * @param commaSeparatedPaths Comma separated paths to be set as 
     *        the list of inputs for the map-reduce job.
     */
    public static void setInputPaths(JobConf conf, String commaSeparatedPaths) {
        setInputPaths(conf, StringUtils.stringToPath(getPathStrings(commaSeparatedPaths)));
    }

    /**
     * Add the given comma separated paths to the list of inputs for
     *  the map-reduce job.
     * 
     * @param conf The configuration of the job 
     * @param commaSeparatedPaths Comma separated paths to be added to
     *        the list of inputs for the map-reduce job.
     */
    public static void addInputPaths(JobConf conf, String commaSeparatedPaths) {
        for (String str : getPathStrings(commaSeparatedPaths)) {
            addInputPath(conf, new Path(str));
        }
    }

    /**
     * Set the array of {@link Path}s as the list of inputs
     * for the map-reduce job.
     * 
     * @param conf Configuration of the job. 
     * @param inputPaths the {@link Path}s of the input directories/files 
     * for the map-reduce job.
     */
    public static void setInputPaths(JobConf conf, Path... inputPaths) {
        Path path = new Path(conf.getWorkingDirectory(), inputPaths[0]);
        StringBuffer str = new StringBuffer(StringUtils.escapeString(path.toString()));
        for (int i = 1; i < inputPaths.length; i++) {
            str.append(StringUtils.COMMA_STR);
            path = new Path(conf.getWorkingDirectory(), inputPaths[i]);
            str.append(StringUtils.escapeString(path.toString()));
        }
        conf.set("mapred.input.dir", str.toString());
    }

    /**
     * Add a {@link Path} to the list of inputs for the map-reduce job.
     * 
     * @param conf The configuration of the job 
     * @param path {@link Path} to be added to the list of inputs for 
     *            the map-reduce job.
     */
    public static void addInputPath(JobConf conf, Path path) {
        path = new Path(conf.getWorkingDirectory(), path);
        String dirStr = StringUtils.escapeString(path.toString());
        String dirs = conf.get("mapred.input.dir");
        conf.set("mapred.input.dir", dirs == null ? dirStr : dirs + StringUtils.COMMA_STR + dirStr);
    }

    // This method escapes commas in the glob pattern of the given paths.
    private static String[] getPathStrings(String commaSeparatedPaths) {
        int length = commaSeparatedPaths.length();
        int curlyOpen = 0;
        int pathStart = 0;
        boolean globPattern = false;
        List<String> pathStrings = new ArrayList<String>();

        for (int i = 0; i < length; i++) {
            char ch = commaSeparatedPaths.charAt(i);
            switch (ch) {
            case '{': {
                curlyOpen++;
                if (!globPattern) {
                    globPattern = true;
                }
                break;
            }
            case '}': {
                curlyOpen--;
                if (curlyOpen == 0 && globPattern) {
                    globPattern = false;
                }
                break;
            }
            case ',': {
                if (!globPattern) {
                    pathStrings.add(commaSeparatedPaths.substring(pathStart, i));
                    pathStart = i + 1;
                }
                break;
            }
            }
        }
        pathStrings.add(commaSeparatedPaths.substring(pathStart, length));

        return pathStrings.toArray(new String[0]);
    }

    /**
     * Get the list of input {@link Path}s for the map-reduce job.
     * 
     * @param conf The configuration of the job 
     * @return the list of input {@link Path}s for the map-reduce job.
     */
    public static Path[] getInputPaths(JobConf conf) {
        String dirs = conf.get("mapred.input.dir", "");
        String[] list = StringUtils.split(dirs);
        Path[] result = new Path[list.length];
        for (int i = 0; i < list.length; i++) {
            result[i] = new Path(StringUtils.unEscapeString(list[i]));
        }
        return result;
    }

    private void sortInDescendingOrder(List<NodeInfo> mylist) {
        Collections.sort(mylist, new Comparator<NodeInfo>() {
            public int compare(NodeInfo obj1, NodeInfo obj2) {

                if (obj1 == null || obj2 == null)
                    return -1;

                if (obj1.getValue() == obj2.getValue()) {
                    return 0;
                } else {
                    return ((obj1.getValue() < obj2.getValue()) ? 1 : -1);
                }
            }
        });
    }

    /** 
     * This function identifies and returns the hosts that contribute 
     * most for a given split. For calculating the contribution, rack
     * locality is treated on par with host locality, so hosts from racks
     * that contribute the most are preferred over hosts on racks that 
     * contribute less
     * @param blkLocations The list of block locations
     * @param offset 
     * @param splitSize 
     * @return array of hosts that contribute most to this split
     * @throws IOException
     */
    protected String[] getSplitHosts(BlockLocation[] blkLocations, long offset, long splitSize,
            NetworkTopology clusterMap) throws IOException {

        int startIndex = getBlockIndex(blkLocations, offset);

        long bytesInThisBlock = blkLocations[startIndex].getOffset() + blkLocations[startIndex].getLength()
                - offset;

        //If this is the only block, just return
        if (bytesInThisBlock >= splitSize) {
            return blkLocations[startIndex].getHosts();
        }

        long bytesInFirstBlock = bytesInThisBlock;
        int index = startIndex + 1;
        splitSize -= bytesInThisBlock;

        while (splitSize > 0) {
            bytesInThisBlock = Math.min(splitSize, blkLocations[index++].getLength());
            splitSize -= bytesInThisBlock;
        }

        long bytesInLastBlock = bytesInThisBlock;
        int endIndex = index - 1;

        Map<Node, NodeInfo> hostsMap = new IdentityHashMap<Node, NodeInfo>();
        Map<Node, NodeInfo> racksMap = new IdentityHashMap<Node, NodeInfo>();
        String[] allTopos = new String[0];

        // Build the hierarchy and aggregate the contribution of 
        // bytes at each level. See TestGetSplitHosts.java 

        for (index = startIndex; index <= endIndex; index++) {

            // Establish the bytes in this block
            if (index == startIndex) {
                bytesInThisBlock = bytesInFirstBlock;
            } else if (index == endIndex) {
                bytesInThisBlock = bytesInLastBlock;
            } else {
                bytesInThisBlock = blkLocations[index].getLength();
            }

            allTopos = blkLocations[index].getTopologyPaths();

            // If no topology information is available, just
            // prefix a fakeRack
            if (allTopos.length == 0) {
                allTopos = fakeRacks(blkLocations, index);
            }

            // NOTE: This code currently works only for one level of
            // hierarchy (rack/host). However, it is relatively easy
            // to extend this to support aggregation at different
            // levels 

            for (String topo : allTopos) {

                Node node, parentNode;
                NodeInfo nodeInfo, parentNodeInfo;

                node = clusterMap.getNode(topo);

                if (node == null) {
                    node = new NodeBase(topo);
                    clusterMap.add(node);
                }

                nodeInfo = hostsMap.get(node);

                if (nodeInfo == null) {
                    nodeInfo = new NodeInfo(node);
                    hostsMap.put(node, nodeInfo);
                    parentNode = node.getParent();
                    parentNodeInfo = racksMap.get(parentNode);
                    if (parentNodeInfo == null) {
                        parentNodeInfo = new NodeInfo(parentNode);
                        racksMap.put(parentNode, parentNodeInfo);
                    }
                    parentNodeInfo.addLeaf(nodeInfo);
                } else {
                    nodeInfo = hostsMap.get(node);
                    parentNode = node.getParent();
                    parentNodeInfo = racksMap.get(parentNode);
                }

                nodeInfo.addValue(index, bytesInThisBlock);
                parentNodeInfo.addValue(index, bytesInThisBlock);

            } // for all topos

        } // for all indices

        return identifyHosts(allTopos.length, racksMap);
    }

    private String[] identifyHosts(int replicationFactor, Map<Node, NodeInfo> racksMap) {

        String[] retVal = new String[replicationFactor];

        List<NodeInfo> rackList = new LinkedList<NodeInfo>();

        rackList.addAll(racksMap.values());

        // Sort the racks based on their contribution to this split
        sortInDescendingOrder(rackList);

        boolean done = false;
        int index = 0;

        // Get the host list for all our aggregated items, sort
        // them and return the top entries
        for (NodeInfo ni : rackList) {

            Set<NodeInfo> hostSet = ni.getLeaves();

            List<NodeInfo> hostList = new LinkedList<NodeInfo>();
            hostList.addAll(hostSet);

            // Sort the hosts in this rack based on their contribution
            sortInDescendingOrder(hostList);

            for (NodeInfo host : hostList) {
                // Strip out the port number from the host name
                retVal[index++] = host.node.getName().split(":")[0];
                if (index == replicationFactor) {
                    done = true;
                    break;
                }
            }

            if (done == true) {
                break;
            }
        }
        return retVal;
    }

    private String[] fakeRacks(BlockLocation[] blkLocations, int index) throws IOException {
        String[] allHosts = blkLocations[index].getHosts();
        String[] allTopos = new String[allHosts.length];
        for (int i = 0; i < allHosts.length; i++) {
            allTopos[i] = NetworkTopology.DEFAULT_RACK + "/" + allHosts[i];
        }
        return allTopos;
    }

    private static class NodeInfo {
        final Node node;
        final Set<Integer> blockIds;
        final Set<NodeInfo> leaves;

        private long value;

        NodeInfo(Node node) {
            this.node = node;
            blockIds = new HashSet<Integer>();
            leaves = new HashSet<NodeInfo>();
        }

        long getValue() {
            return value;
        }

        void addValue(int blockIndex, long value) {
            if (blockIds.add(blockIndex) == true) {
                this.value += value;
            }
        }

        Set<NodeInfo> getLeaves() {
            return leaves;
        }

        void addLeaf(NodeInfo nodeInfo) {
            leaves.add(nodeInfo);
        }
    }
}