com.b2international.snowowl.snomed.datastore.converter.SnomedRelationshipConverter.java Source code

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/*
 * Copyright 2011-2018 B2i Healthcare Pte Ltd, http://b2i.sg
 * 
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *      http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
package com.b2international.snowowl.snomed.datastore.converter;

import static com.b2international.snowowl.core.domain.IComponent.ID_FUNCTION;

import java.util.List;
import java.util.Map;
import java.util.Set;

import com.b2international.commons.http.ExtendedLocale;
import com.b2international.commons.options.Options;
import com.b2international.snowowl.core.domain.BranchContext;
import com.b2international.snowowl.datastore.request.BaseRevisionResourceConverter;
import com.b2international.snowowl.snomed.core.domain.CharacteristicType;
import com.b2international.snowowl.snomed.core.domain.RelationshipModifier;
import com.b2international.snowowl.snomed.core.domain.SnomedConcept;
import com.b2international.snowowl.snomed.core.domain.SnomedConcepts;
import com.b2international.snowowl.snomed.core.domain.SnomedRelationship;
import com.b2international.snowowl.snomed.core.domain.SnomedRelationships;
import com.b2international.snowowl.snomed.datastore.index.entry.SnomedRelationshipIndexEntry;
import com.b2international.snowowl.snomed.datastore.request.SnomedRequests;
import com.google.common.base.Function;
import com.google.common.base.Strings;
import com.google.common.collect.FluentIterable;
import com.google.common.collect.Maps;

final class SnomedRelationshipConverter extends
        BaseRevisionResourceConverter<SnomedRelationshipIndexEntry, SnomedRelationship, SnomedRelationships> {

    SnomedRelationshipConverter(BranchContext context, Options expand, List<ExtendedLocale> locales) {
        super(context, expand, locales);
    }

    @Override
    protected SnomedRelationships createCollectionResource(List<SnomedRelationship> results, String scrollId,
            String searchAfter, int limit, int total) {
        return new SnomedRelationships(results, scrollId, searchAfter, limit, total);
    }

    @Override
    protected SnomedRelationship toResource(final SnomedRelationshipIndexEntry input) {
        final SnomedRelationship result = new SnomedRelationship();
        result.setStorageKey(input.getStorageKey());
        result.setActive(input.isActive());
        result.setCharacteristicType(toCharacteristicType(input.getCharacteristicTypeId()));
        result.setDestinationNegated(input.isDestinationNegated());
        result.setEffectiveTime(toEffectiveTime(input.getEffectiveTime()));
        result.setId(input.getId());
        result.setModifier(toRelationshipModifier(input.isUniversal()));
        result.setModuleId(input.getModuleId());
        result.setIconId(input.getIconId());
        result.setReleased(input.isReleased());
        result.setGroup(input.getGroup());
        result.setUnionGroup(input.getUnionGroup());
        result.setDestination(new SnomedConcept(input.getDestinationId()));
        result.setSource(new SnomedConcept(input.getSourceId()));
        result.setType(new SnomedConcept(input.getTypeId()));
        result.setScore(input.getScore());
        return result;
    }

    @Override
    protected void expand(List<SnomedRelationship> results) {
        if (expand().isEmpty()) {
            return;
        }

        final Set<String> relationshipIds = FluentIterable.from(results).transform(ID_FUNCTION).toSet();
        new MembersExpander(context(), expand(), locales()).expand(results, relationshipIds);
        if (expand().containsKey("source")) {
            final Options sourceOptions = expand().get("source", Options.class);
            final Set<String> sourceConceptIds = FluentIterable.from(results)
                    .transform(new Function<SnomedRelationship, String>() {
                        @Override
                        public String apply(SnomedRelationship input) {
                            return input.getSourceId();
                        }
                    }).toSet();
            final SnomedConcepts sourceConcepts = SnomedRequests.prepareSearchConcept()
                    .filterByIds(sourceConceptIds).setLimit(sourceConceptIds.size())
                    .setExpand(sourceOptions.get("expand", Options.class)).setLocales(locales()).build()
                    .execute(context());
            final Map<String, SnomedConcept> sourceConceptsById = Maps.uniqueIndex(sourceConcepts, ID_FUNCTION);
            for (SnomedRelationship relationship : results) {
                final String sourceId = relationship.getSourceId();
                if (sourceConceptsById.containsKey(sourceId)) {
                    final SnomedConcept sourceConcept = sourceConceptsById.get(sourceId);
                    ((SnomedRelationship) relationship).setSource(sourceConcept);
                }
            }
        }
        if (expand().containsKey("destination")) {
            final Options destinationOptions = expand().get("destination", Options.class);
            final Set<String> destinationConceptIds = FluentIterable.from(results)
                    .transform(new Function<SnomedRelationship, String>() {
                        @Override
                        public String apply(SnomedRelationship input) {
                            return input.getDestinationId();
                        }
                    }).toSet();
            final SnomedConcepts destinationConcepts = SnomedRequests.prepareSearchConcept()
                    .filterByIds(destinationConceptIds).setLimit(destinationConceptIds.size())
                    .setExpand(destinationOptions.get("expand", Options.class)).setLocales(locales()).build()
                    .execute(context());
            final Map<String, SnomedConcept> destinationConceptsById = Maps.uniqueIndex(destinationConcepts,
                    ID_FUNCTION);
            for (SnomedRelationship relationship : results) {
                final String destinationId = relationship.getDestinationId();
                if (destinationConceptsById.containsKey(destinationId)) {
                    final SnomedConcept destinationConcept = destinationConceptsById.get(destinationId);
                    ((SnomedRelationship) relationship).setDestination(destinationConcept);
                }
            }
        }
        if (expand().containsKey("type")) {
            final Options typeOptions = expand().get("type", Options.class);
            final Set<String> typeConceptIds = FluentIterable.from(results)
                    .transform(new Function<SnomedRelationship, String>() {
                        @Override
                        public String apply(SnomedRelationship input) {
                            return input.getTypeId();
                        }
                    }).toSet();
            final SnomedConcepts typeConcepts = SnomedRequests.prepareSearchConcept().filterByIds(typeConceptIds)
                    .setLimit(typeConceptIds.size()).setExpand(typeOptions.get("expand", Options.class))
                    .setLocales(locales()).build().execute(context());
            final Map<String, SnomedConcept> typeConceptsById = Maps.uniqueIndex(typeConcepts, ID_FUNCTION);
            for (SnomedRelationship relationship : results) {
                final String typeId = relationship.getTypeId();
                if (typeConceptsById.containsKey(typeId)) {
                    final SnomedConcept typeConcept = typeConceptsById.get(typeId);
                    ((SnomedRelationship) relationship).setType(typeConcept);
                }
            }
        }
    }

    private CharacteristicType toCharacteristicType(final String characteristicTypeId) {
        if (Strings.isNullOrEmpty(characteristicTypeId)) {
            return null;
        } else {
            return CharacteristicType.getByConceptId(characteristicTypeId);
        }
    }

    private RelationshipModifier toRelationshipModifier(final boolean universal) {
        return universal ? RelationshipModifier.UNIVERSAL : RelationshipModifier.EXISTENTIAL;
    }
}