Example usage for org.jfree.chart ChartFactory createScatterPlot

List of usage examples for org.jfree.chart ChartFactory createScatterPlot

Introduction

In this page you can find the example usage for org.jfree.chart ChartFactory createScatterPlot.

Prototype

public static JFreeChart createScatterPlot(String title, String xAxisLabel, String yAxisLabel,
        XYDataset dataset) 

Source Link

Document

Creates a scatter plot with default settings.

Usage

From source file:cn.InstFS.wkr.NetworkMining.UIs.TimeSeriesChart2.java

public static JFreeChart createChart(DataItems nor, DataItems abnor, String title, String protocol1,
        String protocol2) {/* w  ww  . j  a  v a 2 s  .c  o m*/
    // ?
    XYDataset xydataset1 = TimeSeriesChart1.createNormalDataset(nor, protocol1);
    JFreeChart jfreechart = ChartFactory.createScatterPlot(title, "", "", xydataset1);
    XYPlot xyplot = (XYPlot) jfreechart.getPlot();

    XYLineAndShapeRenderer xylineandshaperenderer1 = (XYLineAndShapeRenderer) xyplot.getRenderer();
    // ??1?1

    NumberAxis numberaxis = (NumberAxis) xyplot.getRangeAxis();
    numberaxis.setAutoRangeIncludesZero(false);
    java.awt.geom.Ellipse2D.Double double1 = new java.awt.geom.Ellipse2D.Double(-4D, -4D, 6D, 6D);
    // ???

    // ??
    xylineandshaperenderer1.setSeriesLinesVisible(0, true);
    xylineandshaperenderer1.setBaseShapesVisible(false);
    xylineandshaperenderer1.setSeriesShape(0, double1);
    xylineandshaperenderer1.setSeriesPaint(0, Color.blue);
    xylineandshaperenderer1.setSeriesFillPaint(0, Color.blue);
    xylineandshaperenderer1.setSeriesOutlinePaint(0, Color.blue);
    xylineandshaperenderer1.setSeriesStroke(0, new BasicStroke(0.5F));

    // ?
    XYDataset xydataset2 = TimeSeriesChart1.createNormalDataset(abnor, protocol2);
    /*      XYTextAnnotation localXYTextAnnotation = new XYTextAnnotation("aa",10,
    Double.parseDouble(abnor.getElementAt(10).getData()));
          xyplot.addAnnotation(localXYTextAnnotation);*/
    XYLineAndShapeRenderer xylineandshaperenderer2 = new XYLineAndShapeRenderer();
    int datasetcount = xyplot.getDatasetCount();
    xyplot.setDataset(datasetcount, xydataset2);
    xyplot.setRenderer(datasetcount, xylineandshaperenderer2);
    /*      System.out.println("DatasetCount="+xyplot.getDatasetCount());
                  
          for(int c=0;c<xyplot.getDatasetCount();c++){
             System.out.println("DatasetSeriesCount="+xyplot.getDataset(c).getSeriesCount());
             System.out.println("Dataset["+c+"]="+xyplot.getDataset(c).getSeriesKey(0));
          }*/

    /*   // ??? 
       xylineandshaperenderer2.setBaseShapesVisible(false);
       // ??
       xylineandshaperenderer2.setSeriesLinesVisible(0, true);
       xylineandshaperenderer2.setSeriesShape(0, double1);
       // 
       xylineandshaperenderer2.setSeriesPaint(0, Color.green);
       xylineandshaperenderer2.setSeriesFillPaint(0, Color.green);
       xylineandshaperenderer2.setSeriesOutlinePaint(0, Color.green);
            
       xylineandshaperenderer2.setUseFillPaint(true);
       xylineandshaperenderer2
    .setBaseItemLabelGenerator(new StandardXYItemLabelGenerator());
       xylineandshaperenderer2.setSeriesStroke(0, new BasicStroke(0.5F));
               
    */
    xylineandshaperenderer2.setSeriesLinesVisible(0, true);
    xylineandshaperenderer2.setBaseShapesVisible(false);
    xylineandshaperenderer2.setSeriesShape(0, double1);
    xylineandshaperenderer2.setSeriesPaint(0, Color.GREEN);
    xylineandshaperenderer2.setSeriesFillPaint(0, Color.GREEN);
    xylineandshaperenderer2.setSeriesOutlinePaint(0, Color.green);
    xylineandshaperenderer2.setSeriesStroke(0, new BasicStroke(0.5F));
    jfreechart.getLegend().setVisible(true);
    return jfreechart;

}

From source file:org.fhaes.fhsamplesize.view.SSIZCurveChart.java

/**
 * Create the chart./*from   w  w  w  .  j a v a2  s  .  c  om*/
 * 
 * @param eventsPerCenturyDataset
 * @return
 */
private static JFreeChart createChart(final XYDataset eventsPerCenturyDataset, Integer xcross, Integer ycross) {

    // JFreeChart jfreechart = ChartFactory.createTimeSeriesChart(null, "Number of series resampled", "Number of events",
    // eventsPerCenturyDataset, true, true, false);

    JFreeChart jfreechart = ChartFactory.createScatterPlot(null, "Number of series resampled",
            "Number of events per century", eventsPerCenturyDataset);

    jfreechart.setBackgroundPaint(Color.WHITE);
    XYPlot xyplot = (XYPlot) jfreechart.getPlot();
    xyplot.setInsets(new RectangleInsets(5D, 5D, 5D, 20D));
    xyplot.setBackgroundPaint(Color.WHITE);
    xyplot.setAxisOffset(new RectangleInsets(5D, 5D, 5D, 5D));
    // xyplot.setDomainGridlinePaint(Color.white);
    // xyplot.setRangeGridlinePaint(Color.white);
    DeviationRenderer deviationrenderer = new DeviationRenderer(true, false);
    deviationrenderer.setSeriesStroke(0, new BasicStroke(3F, 1, 1));
    deviationrenderer.setSeriesStroke(0, new BasicStroke(3F, 1, 1));
    deviationrenderer.setSeriesStroke(1, new BasicStroke(3F, 1, 1));
    deviationrenderer.setSeriesFillPaint(0, new Color(255, 200, 200));
    deviationrenderer.setSeriesFillPaint(1, new Color(200, 200, 255));
    xyplot.setRenderer(deviationrenderer);
    NumberAxis numberaxis = (NumberAxis) xyplot.getRangeAxis();
    numberaxis.setAutoRangeIncludesZero(false);
    numberaxis.setStandardTickUnits(NumberAxis.createIntegerTickUnits());
    jfreechart.removeLegend();

    if (xcross != null && ycross != null) {
        XYPlot xyp = jfreechart.getXYPlot();

        xyp.setRangeCrosshairVisible(true);
        xyp.setRangeCrosshairValue(ycross, true);
        xyp.setRangeCrosshairLockedOnData(true);

        xyp.setDomainCrosshairVisible(true);
        xyp.setDomainCrosshairValue(xcross, true);
        xyp.setDomainCrosshairLockedOnData(true);
    }

    // Initialize the chart variable for later use
    chart = jfreechart;

    return jfreechart;
}

From source file:org.jfree.chart.demo.selection.SelectionDemo2.java

private static JFreeChart createChart(XYDataset dataset, DatasetSelectionExtension<XYCursor> ext) {
    JFreeChart chart = ChartFactory.createScatterPlot("SelectionDemo2", "X", "Y", dataset);

    XYPlot plot = (XYPlot) chart.getPlot();
    plot.setNoDataMessage("NO DATA");

    plot.setDomainPannable(true);/*from w w  w .  j a  v a  2  s.  co m*/
    plot.setRangePannable(true);
    plot.setDomainZeroBaselineVisible(true);
    plot.setRangeZeroBaselineVisible(true);

    plot.setDomainGridlineStroke(new BasicStroke(0.0f));
    plot.setRangeGridlineStroke(new BasicStroke(0.0f));

    plot.setDomainMinorGridlinesVisible(true);
    plot.setRangeMinorGridlinesVisible(true);

    XYLineAndShapeRenderer r = (XYLineAndShapeRenderer) plot.getRenderer();
    r.setSeriesFillPaint(0, r.lookupSeriesPaint(0));
    r.setSeriesFillPaint(1, r.lookupSeriesPaint(1));
    r.setSeriesFillPaint(2, r.lookupSeriesPaint(2));
    r.setUseFillPaint(true);

    NumberAxis domainAxis = (NumberAxis) plot.getDomainAxis();
    domainAxis.setAutoRangeIncludesZero(false);

    domainAxis.setTickMarkInsideLength(2.0f);
    domainAxis.setTickMarkOutsideLength(2.0f);
    domainAxis.setMinorTickMarksVisible(true);

    NumberAxis rangeAxis = (NumberAxis) plot.getRangeAxis();
    rangeAxis.setTickMarkInsideLength(2.0f);
    rangeAxis.setTickMarkOutsideLength(2.0f);
    rangeAxis.setMinorTickMarksVisible(true);

    //add selection specific rendering
    IRSUtilities.setSelectedItemFillPaint(r, ext, Color.white);

    //register plot as selection change listener
    ext.addChangeListener(plot);

    return chart;
}

From source file:mt.listeners.WriteStatsListener.java

public void writeStatstofile() {
    ArrayList<Pair<Integer, ArrayList<Pair<Integer, Double>>>> Alllife = new ArrayList<Pair<Integer, ArrayList<Pair<Integer, Double>>>>();

    for (int i = 0; i < parent.lifecount.size(); ++i) {
        Pair<Integer, ArrayList<Pair<Integer, Double>>> life = new ValuePair<Integer, ArrayList<Pair<Integer, Double>>>(
                i, parent.lifecount);/*ww  w .j  a v  a 2 s.c om*/
        Alllife.add(life);

    }

    List<Pair<Integer, Double>> Xvalues = new ArrayList<Pair<Integer, Double>>();

    for (final Pair<Integer, ArrayList<Pair<Integer, Double>>> key : Alllife) {

        Xvalues.addAll(key.getB());
    }

    XYSeries timeseries = Tracking.drawPoints(Xvalues, new double[] { 1, 1, 1 }, "Time Distribution");
    XYSeries counterseries = new XYSeries("Time Distribution");

    for (final Pair<Integer, Double> key : Xvalues) {

        counterseries.add(key.getB() * parent.calibrations[2], key.getA());
    }

    XYSeriesCollection dataset = new XYSeriesCollection(counterseries);

    final JFreeChart chart = ChartFactory.createScatterPlot("LifeTime Distribution", "Time (sec)",
            "Count of growth events", dataset);

    DisplayPoints.display(chart, new Dimension(800, 500));

    LengthDistribution.GetLengthDistributionArray(parent.AllMoviesB, parent.calibrations);

}

From source file:mt.LengthDistribution.java

public static void GetLengthDistributionArray(ArrayList<File> AllMovies, double[] calibration) {

    ArrayList<Double> maxlist = new ArrayList<Double>();
    for (int i = 0; i < AllMovies.size(); ++i) {

        double maxlength = LengthDistribution.Lengthdistro(AllMovies.get(i));

        if (maxlength != Double.NaN && maxlength > 0)
            maxlist.add(maxlength);/*  w  w w  .ja v a  2  s.c  o m*/

    }
    Collections.sort(maxlist);

    int min = 0;
    int max = (int) Math.round(maxlist.get(maxlist.size() - 1)) + 1;
    XYSeries counterseries = new XYSeries("MT length distribution");
    XYSeries Logcounterseries = new XYSeries("MT Log length distribution");
    final ArrayList<Point> points = new ArrayList<Point>();
    for (int length = 0; length < max; ++length) {

        HashMap<Integer, Integer> frameseed = new HashMap<Integer, Integer>();

        int count = 0;
        for (int i = 0; i < AllMovies.size(); ++i) {

            File file = AllMovies.get(i);

            double currentlength = LengthDistribution.Lengthdistro(file);

            ArrayList<FLSobject> currentobject = Tracking.loadMTStat(file);

            if (currentlength > length) {

                for (int index = 0; index < currentobject.size(); ++index) {
                    ArrayList<Integer> seedlist = new ArrayList<Integer>();
                    if (currentobject.get(index).length >= length) {
                        seedlist.add(currentobject.get(index).seedID);
                        if (frameseed.get(currentobject.get(index).Framenumber) != null
                                && frameseed.get(currentobject.get(index).Framenumber) != Double.NaN) {

                            int currentcount = frameseed.get(currentobject.get(index).Framenumber);
                            frameseed.put(currentobject.get(index).Framenumber, seedlist.size() + currentcount);
                        } else if (currentobject.get(index) != null)
                            frameseed.put(currentobject.get(index).Framenumber, seedlist.size());

                    }

                }

            }

        }

        // Get maxima length, count
        int maxvalue = Integer.MIN_VALUE;

        for (int key : frameseed.keySet()) {

            int Count = frameseed.get(key);

            if (Count >= maxvalue)
                maxvalue = Count;
        }

        if (maxvalue != Integer.MIN_VALUE) {
            counterseries.add(length, maxvalue);

            if (maxvalue > 0) {
                Logcounterseries.add((length), Math.log(maxvalue));
                points.add(new Point(new double[] { length, Math.log(maxvalue) }));
            }

        }
    }

    final XYSeriesCollection dataset = new XYSeriesCollection();
    final XYSeriesCollection nofitdataset = new XYSeriesCollection();
    dataset.addSeries(counterseries);
    nofitdataset.addSeries(counterseries);
    final XYSeriesCollection Logdataset = new XYSeriesCollection();
    Logdataset.addSeries(Logcounterseries);

    final JFreeChart chart = ChartFactory.createScatterPlot("MT length distribution", "Number of MT",
            "Length (micrometer)", dataset);

    final JFreeChart nofitchart = ChartFactory.createScatterPlot("MT length distribution", "Number of MT",
            "Length (micrometer)", nofitdataset);

    // Fitting line to log of the length distribution
    interpolation.Polynomial poly = new interpolation.Polynomial(1);
    try {

        poly.fitFunction(points);

    } catch (NotEnoughDataPointsException e) {
        // TODO Auto-generated catch block
        e.printStackTrace();
    }
    DisplayPoints.display(nofitchart, new Dimension(800, 500));
    dataset.addSeries(Tracking.drawexpFunction(poly, counterseries.getMinX(), counterseries.getMaxX(), 0.5,
            "Exponential fit"));
    NumberFormat nf = NumberFormat.getInstance(Locale.ENGLISH);
    nf.setMaximumFractionDigits(3);
    TextTitle legendText = new TextTitle("Mean Length" + " : " + nf.format(-1.0 / poly.getCoefficients(1))
            + "  " + "Standard Deviation" + " : " + nf.format(poly.SSE));
    legendText.setPosition(RectangleEdge.RIGHT);

    DisplayPoints.display(chart, new Dimension(800, 500));
    chart.addSubtitle(legendText);

    final JFreeChart logchart = ChartFactory.createScatterPlot("MT Log length distribution", "Number of MT",
            "Length (micrometer)", Logdataset);
    //     DisplayPoints.display(logchart, new Dimension(800, 500));
    for (int i = 1; i >= 0; --i)
        System.out.println(poly.getCoefficients(i) + "  " + "x" + " X to the power of " + i);

    //  Logdataset.addSeries(Tracking.drawFunction(poly, counterseries.getMinX(), counterseries.getMaxX(), 0.5, "Straight line fit"));

    WriteLengthdistroFile(AllMovies, counterseries, 0);

}

From source file:org.matsim.contrib.analysis.vsp.traveltimedistance.TravelTimeValidationRunner.java

private void writeTravelTimeValidation(String folder, List<CarTrip> trips) {
    BufferedWriter bw = IOUtils.getBufferedWriter(folder + "/validated_trips.csv");
    XYSeriesCollection times = new XYSeriesCollection();
    XYSeriesCollection distances = new XYSeriesCollection();

    XYSeries distancess = new XYSeries("distances", true, true);
    XYSeries timess = new XYSeries("times", true, true);
    times.addSeries(timess);// www . j a v a  2  s . com
    distances.addSeries(distancess);
    try {
        bw.append(
                "agent;departureTime;fromX;fromY;toX;toY;traveltimeActual;traveltimeValidated;traveledDistance;validatedDistance");
        for (CarTrip trip : trips) {
            if (trip.getValidatedTravelTime() != null) {
                bw.newLine();
                bw.append(trip.toString());
                timess.add(trip.getActualTravelTime(), trip.getValidatedTravelTime());
                distancess.add(trip.getTravelledDistance(), trip.getValidatedTravelDistance());
            }
        }

        bw.flush();
        bw.close();
        final JFreeChart chart2 = ChartFactory.createScatterPlot("Travel Times", "Simulated travel time [s]",
                "Validated travel time [s]", times);
        final JFreeChart chart = ChartFactory.createScatterPlot("Travel Distances",
                "Simulated travel distance [m]", "Validated travel distance [m]", distances);

        NumberAxis yAxis = (NumberAxis) ((XYPlot) chart2.getPlot()).getRangeAxis();
        NumberAxis xAxis = (NumberAxis) ((XYPlot) chart2.getPlot()).getDomainAxis();
        NumberAxis yAxisd = (NumberAxis) ((XYPlot) chart.getPlot()).getRangeAxis();
        NumberAxis xAxisd = (NumberAxis) ((XYPlot) chart.getPlot()).getDomainAxis();
        yAxisd.setUpperBound(xAxisd.getUpperBound());
        yAxis.setUpperBound(xAxis.getUpperBound());
        yAxis.setTickUnit(new NumberTickUnit(500));
        xAxis.setTickUnit(new NumberTickUnit(500));

        XYAnnotation diagonal = new XYLineAnnotation(xAxis.getRange().getLowerBound(),
                yAxis.getRange().getLowerBound(), xAxis.getRange().getUpperBound(),
                yAxis.getRange().getUpperBound());
        ((XYPlot) chart2.getPlot()).addAnnotation(diagonal);

        XYAnnotation diagonald = new XYLineAnnotation(xAxisd.getRange().getLowerBound(),
                yAxisd.getRange().getLowerBound(), xAxisd.getRange().getUpperBound(),
                yAxisd.getRange().getUpperBound());
        ((XYPlot) chart.getPlot()).addAnnotation(diagonald);

        ChartUtilities.writeChartAsPNG(new FileOutputStream(folder + "/validated_traveltimes" + ".png"), chart2,
                1500, 1500);
        ChartUtilities.writeChartAsPNG(new FileOutputStream(folder + "/validated_traveldistances.png"), chart,
                1500, 1500);
    } catch (IOException e) {
        // TODO Auto-generated catch block
        e.printStackTrace();
    }

}

From source file:my.electrochem.ElectrochemUI.java

private ChartPanel createChartPanel() {
    //creates a line chart object
    //returns the chart panel
    String chartTitle = "i-E curve";
    String xAxisLabel = "E (V)";
    String yAxisLabel = "i (A)";

    dataset1 = createEmptyDataset();/*from   www.jav a 2  s . c o m*/

    JFreeChart chart = ChartFactory.createScatterPlot(chartTitle, xAxisLabel, yAxisLabel, dataset1);

    XYPlot plot = chart.getXYPlot();

    plot.setDomainCrosshairVisible(false);
    plot.setRangeCrosshairVisible(false);
    plot.setDomainCrosshairLockedOnData(false);
    plot.setRangeCrosshairLockedOnData(false);

    /*chart.addProgressListener(new ChartProgressListener() {
    @Override
    public void chartProgress(ChartProgressEvent cpe) {
        if (cpe.getType() == ChartProgressEvent.DRAWING_FINISHED) {
            //System.out.println("Click event!!");
            XYPlot xyPlot2 = cpe.getChart().getXYPlot();
            System.out.println("drawing finished");
            System.out.println("Xreal:"+xyPlot2.getDomainCrosshairValue()
                   +"Yreal:"+xyPlot2.getRangeCrosshairValue());
            if (click) {
                System.out.println("click true");
                if (x1 == -423.0) {
                    x1 = 0.0;
                    y1 = 0.0;
                            
                }
            
                if (x1 == 0.0 && y1 == 0.0) {
                    System.out.println("print 0,0");
                    click = true;
                    x1 = xyPlot2.getDomainCrosshairValue();
                    y1 = xyPlot2.getRangeCrosshairValue();
                    //xyPlot2.clearAnnotations();
                } else {
                    xyPlot2.clearAnnotations();
                    System.out.println("true-false");
                    click = false;
                    x1 = xyPlot2.getDomainCrosshairValue();
                    y1 = xyPlot2.getRangeCrosshairValue();
                }
                      
                             
            } else {
                System.out.println("click false");
               x2 = xyPlot2.getDomainCrosshairValue();
               y2 = xyPlot2.getRangeCrosshairValue();
               createLineAnn(xyPlot2, x1, y1, x2, y2);
               click = true;
           }
       }
       }
    });*/

    XYLineAndShapeRenderer renderer = new XYLineAndShapeRenderer();

    // sets paint color for each series
    //renderer.setSeriesPaint(0, Color.RED);

    // sets thickness for series (using strokes)
    //renderer.setSeriesStroke(0, new BasicStroke(5.0f));
    renderer.setBaseLinesVisible(true);
    //renderer.setSeriesLinesVisible(0, true);

    //renderer.setBaseShapesFilled(true);
    renderer.setBaseShapesVisible(false);
    //srenderer.setDrawSeriesLineAsPath(false);

    plot.setOutlinePaint(Color.BLUE);
    plot.setOutlineStroke(new BasicStroke(2.0f));
    plot.setBackgroundPaint(Color.DARK_GRAY);

    plot.setRangeGridlinesVisible(true);
    plot.setRangeGridlinePaint(Color.BLACK);

    plot.setDomainGridlinesVisible(true);
    plot.setDomainGridlinePaint(Color.BLACK);

    plot.setRenderer(renderer);

    return new ChartPanel(chart);
}

From source file:mt.LengthDistribution.java

public static void GetLengthDistributionArrayatTime(ArrayList<File> AllMovies, double[] calibration,
        final int framenumber) {

    ArrayList<Double> maxlist = new ArrayList<Double>();
    for (int i = 0; i < AllMovies.size(); ++i) {

        ArrayList<Pair<Integer, Double>> lengthlist = LengthDistribution.LengthdistroatTime(AllMovies.get(i),
                framenumber);//from   w w w  .  jav  a  2s. c o m

        for (int index = 0; index < lengthlist.size(); ++index) {
            if (lengthlist.get(index).getB() != Double.NaN && lengthlist.get(index).getB() > 0)
                maxlist.add(lengthlist.get(index).getB());

        }
    }
    Collections.sort(maxlist);

    int min = 0;
    int max = 0;
    if (maxlist.size() > 0)
        max = (int) Math.round(maxlist.get(maxlist.size() - 1)) + 1;
    XYSeries counterseries = new XYSeries("MT length distribution");
    XYSeries Logcounterseries = new XYSeries("MT Log length distribution");
    final ArrayList<Point> points = new ArrayList<Point>();
    for (int length = 0; length < max; ++length) {

        HashMap<Integer, Integer> frameseed = new HashMap<Integer, Integer>();

        int count = 0;
        for (int i = 0; i < AllMovies.size(); ++i) {

            File file = AllMovies.get(i);

            ArrayList<FLSobject> currentobject = Tracking.loadMTStat(file);

            if (currentobject != null)
                for (int index = 0; index < currentobject.size(); ++index) {
                    ArrayList<Integer> seedlist = new ArrayList<Integer>();
                    if (currentobject.get(index).length >= length
                            && currentobject.get(index).Framenumber == framenumber) {
                        seedlist.add(currentobject.get(index).seedID);
                        if (frameseed.get(currentobject.get(index).Framenumber) != null
                                && frameseed.get(currentobject.get(index).Framenumber) != Double.NaN) {

                            int currentcount = frameseed.get(currentobject.get(index).Framenumber);
                            frameseed.put(currentobject.get(index).Framenumber, seedlist.size() + currentcount);
                        } else if (currentobject.get(index) != null)
                            frameseed.put(currentobject.get(index).Framenumber, seedlist.size());

                    }

                }

        }

        // Get maxima length, count
        int maxvalue = Integer.MIN_VALUE;

        for (int key : frameseed.keySet()) {

            int Count = frameseed.get(key);

            if (Count >= maxvalue)
                maxvalue = Count;
        }

        if (maxvalue != Integer.MIN_VALUE) {
            counterseries.add(length, maxvalue);

            if (maxvalue > 0) {

                System.out.println("Max " + maxvalue);
                Logcounterseries.add((length), Math.log(maxvalue));
                points.add(new Point(new double[] { length, Math.log(maxvalue) }));
            }

        }
    }

    final XYSeriesCollection dataset = new XYSeriesCollection();
    final XYSeriesCollection nofitdataset = new XYSeriesCollection();
    dataset.addSeries(counterseries);
    nofitdataset.addSeries(counterseries);
    final XYSeriesCollection Logdataset = new XYSeriesCollection();
    Logdataset.addSeries(Logcounterseries);

    final JFreeChart chart = ChartFactory.createScatterPlot("MT length distribution", "Number of MT",
            "Length (micrometer)", dataset);
    final JFreeChart nofitchart = ChartFactory.createScatterPlot("MT length distribution", "Number of MT",
            "Length (micrometer)", nofitdataset);
    // Fitting line to log of the length distribution
    interpolation.Polynomial poly = new interpolation.Polynomial(1);
    try {

        poly.fitFunction(points);

    } catch (NotEnoughDataPointsException e) {

    }
    DisplayPoints.display(nofitchart, new Dimension(800, 500));
    dataset.addSeries(Tracking.drawexpFunction(poly, counterseries.getMinX(), counterseries.getMaxX(), 0.5,
            "Exponential fit"));
    NumberFormat nf = NumberFormat.getInstance(Locale.ENGLISH);
    nf.setMaximumFractionDigits(3);
    TextTitle legendText = new TextTitle("Mean Length" + " : " + nf.format(-1.0 / poly.getCoefficients(1))
            + "  " + "Standard Deviation" + " : " + nf.format(poly.SSE));
    legendText.setPosition(RectangleEdge.RIGHT);

    DisplayPoints.display(chart, new Dimension(800, 500));
    chart.addSubtitle(legendText);

    System.out.println("Series count" + dataset.getSeriesCount());
    final JFreeChart logchart = ChartFactory.createScatterPlot("MT Log length distribution",
            "Length (micrometer)", "Number of MT", Logdataset);
    //     DisplayPoints.display(logchart, new Dimension(800, 500));
    for (int i = 1; i >= 0; --i)
        System.out.println(poly.getCoefficients(i) + "  " + "x" + " X to the power of " + i);

    //  Logdataset.addSeries(Tracking.drawFunction(poly, counterseries.getMinX(), counterseries.getMaxX(), 0.5, "Straight line fit"));
    WriteLengthdistroFile(AllMovies, counterseries, framenumber);
}

From source file:GeMSE.GS.Analysis.Stats.OneSamplePCAPanel.java

private void Plot() {
    double[][] data = _principalComponents.getData();
    if (data[0].length < 2) {
        JOptionPane.showMessageDialog(this,
                "An error occured when computing principal components.     "
                        + "\nRequire at least two principal components, but calculated "
                        + String.valueOf(data[0].length) + "\n",
                "Not enough data", JOptionPane.ERROR_MESSAGE);
        return;/*from   w  ww.  j  a va  2  s. co  m*/
    }

    float[] yAxisColor = new float[3];
    Color.RGBtoHSB(255, 255, 255, yAxisColor);

    float[] hsbValues = new float[3];
    Color.RGBtoHSB(16, 23, 67, hsbValues);

    float[] pcColor = new float[3];
    Color.RGBtoHSB(255, 255, 0, pcColor);

    XYSeriesCollection dataset = new XYSeriesCollection();

    XYSeries series = new XYSeries("PC");
    for (double[] d : data)
        series.add(d[0], d[1]);
    dataset.addSeries(series);

    JFreeChart chart = ChartFactory.createScatterPlot(null, "Principal component 1", "Principal component 2",
            (XYDataset) dataset);
    chart.setBackgroundPaint(Color.getHSBColor(hsbValues[0], hsbValues[1], hsbValues[2]));
    chart.removeLegend();

    XYPlot plot = (XYPlot) chart.getPlot();
    plot.setBackgroundPaint(Color.getHSBColor(hsbValues[0], hsbValues[1], hsbValues[2]));

    Font axisLabelFont = new Font("Dialog", Font.PLAIN, 14);
    Font axisTickLabelFont = new Font("Dialog", Font.PLAIN, 12);

    plot.setDomainGridlinePaint(Color.gray);
    plot.setRangeGridlinePaint(Color.gray);

    plot.getDomainAxis().setTickLabelPaint(Color.white);
    plot.getDomainAxis().setLabelPaint(Color.white);
    plot.getDomainAxis().setLabelFont(axisLabelFont);
    plot.getDomainAxis().setTickLabelFont(axisTickLabelFont);

    plot.getRangeAxis().setTickLabelPaint(Color.getHSBColor(yAxisColor[0], yAxisColor[1], yAxisColor[2]));
    plot.getRangeAxis().setLabelPaint(Color.getHSBColor(yAxisColor[0], yAxisColor[1], yAxisColor[2]));
    plot.getRangeAxis().setLabelFont(axisLabelFont);
    plot.getRangeAxis().setTickLabelFont(axisTickLabelFont);

    Shape shape = ShapeUtilities.createDiagonalCross(4, 0.5f);
    XYItemRenderer renderer = chart.getXYPlot().getRenderer();
    renderer.setSeriesShape(0, shape);
    renderer.setSeriesPaint(0, Color.getHSBColor(pcColor[0], pcColor[1], pcColor[2]));

    ChartPanel panel = new ChartPanel(chart);
    Dimension plotDim = plotPanel.getSize();
    plotDim.height -= (plotDim.height * 10) / 100;
    plotDim.width -= (plotDim.width * 10) / 100;
    panel.setPreferredSize(plotDim);
    plotPanel.setViewportView(panel);

    revalidate();
    repaint();
}