List of usage examples for org.apache.commons.math3.stat.descriptive DescriptiveStatistics getPopulationVariance
public double getPopulationVariance()
From source file:com.github.jessemull.microflex.stat.statdouble.PopulationVarianceDoubleTest.java
/** * Tests set calculation./*from ww w . java 2 s.c o m*/ */ @Test public void testSet() { for (PlateDouble plate : array) { Map<WellDouble, Double> resultMap = new TreeMap<WellDouble, Double>(); Map<WellDouble, Double> returnedMap = variance.set(plate.dataSet()); for (WellDouble well : plate) { double[] input = new double[well.size()]; int index = 0; for (double bd : well) { input[index++] = bd; ; } DescriptiveStatistics stat = new DescriptiveStatistics(input); double result = stat.getPopulationVariance(); resultMap.put(well, result); } for (WellDouble well : plate) { double result = Precision.round(resultMap.get(well), precision); double returned = Precision.round(returnedMap.get(well), precision); assertTrue(result == returned); } } }
From source file:com.github.jessemull.microflexdouble.stat.PopulationVarianceTest.java
/** * Tests well calculation./* w w w. j a v a2 s .c o m*/ */ @Test public void testWell() { for (Plate plate : array) { for (Well well : plate) { double[] input = new double[well.size()]; int index = 0; for (double bd : well) { input[index++] = bd; ; } DescriptiveStatistics stat = new DescriptiveStatistics(input); double result = Precision.round(stat.getPopulationVariance(), precision); double returned = Precision.round(variance.well(well), precision); assertTrue(result == returned); } } }
From source file:com.github.jessemull.microflex.stat.statinteger.PopulationVarianceIntegerTest.java
/** * Tests well calculation.//from www. j a v a2 s . c o m */ @Test public void testWell() { for (PlateInteger plate : array) { for (WellInteger well : plate) { double[] input = new double[well.size()]; int index = 0; for (double bd : well) { input[index++] = bd; ; } DescriptiveStatistics stat = new DescriptiveStatistics(input); double result = Precision.round(stat.getPopulationVariance(), precision); double returned = Precision.round(variance.well(well), precision); assertTrue(result == returned); } } }
From source file:com.github.jessemull.microflex.stat.statdouble.PopulationVarianceDoubleTest.java
/** * Tests well calculation.//from w w w .j a va2 s. c o m */ @Test public void testWell() { for (PlateDouble plate : array) { for (WellDouble well : plate) { double[] input = new double[well.size()]; int index = 0; for (double bd : well) { input[index++] = bd; ; } DescriptiveStatistics stat = new DescriptiveStatistics(input); double result = Precision.round(stat.getPopulationVariance(), precision); double returned = Precision.round(variance.well(well), precision); assertTrue(result == returned); } } }
From source file:com.github.jessemull.microflexinteger.stat.PopulationVarianceTest.java
/** * Tests the aggregated plate statistics method using a collection. *//* w ww.j a v a 2 s . c om*/ @Test public void testAggregatedPlateCollection() { List<Plate> collection = Arrays.asList(array); Map<Plate, Double> aggregatedReturnedMap = variance.platesAggregated(collection); Map<Plate, Double> aggregatedResultMap = new TreeMap<Plate, Double>(); for (Plate plate : collection) { List<Double> resultList = new ArrayList<Double>(); for (Well well : plate) { resultList.addAll(well.toDouble()); } double[] inputAggregated = new double[resultList.size()]; for (int i = 0; i < resultList.size(); i++) { inputAggregated[i] = resultList.get(i); } DescriptiveStatistics statAggregated = new DescriptiveStatistics(inputAggregated); double aggregatedResult = statAggregated.getPopulationVariance(); aggregatedResultMap.put(plate, aggregatedResult); } for (Plate plate : collection) { double result = Precision.round(aggregatedResultMap.get(plate), precision); double returned = Precision.round(aggregatedReturnedMap.get(plate), precision); assertTrue(result == returned); } }
From source file:com.github.jessemull.microflexinteger.stat.PopulationVarianceTest.java
/** * Tests the aggregated plate statistics method using an array. *//* ww w .j ava2s . c o m*/ @Test public void testAggregatedPlateArray() { Map<Plate, Double> aggregatedReturnedMap = variance.platesAggregated(array); Map<Plate, Double> aggregatedResultMap = new TreeMap<Plate, Double>(); for (Plate plate : array) { List<Double> resultList = new ArrayList<Double>(); for (Well well : plate) { resultList.addAll(well.toDouble()); } double[] inputAggregated = new double[resultList.size()]; for (int i = 0; i < resultList.size(); i++) { inputAggregated[i] = resultList.get(i); } DescriptiveStatistics statAggregated = new DescriptiveStatistics(inputAggregated); double aggregatedResult = statAggregated.getPopulationVariance(); aggregatedResultMap.put(plate, aggregatedResult); } for (Plate plate : array) { double result = Precision.round(aggregatedResultMap.get(plate), precision); double returned = Precision.round(aggregatedReturnedMap.get(plate), precision); assertTrue(result == returned); } }
From source file:com.github.jessemull.microflexdouble.stat.PopulationVarianceTest.java
/** * Tests the aggregated plate statistics method using a collection. */// ww w .ja va 2 s .co m @Test public void testAggregatedPlateCollection() { List<Plate> collection = Arrays.asList(array); Map<Plate, Double> aggregatedReturnedMap = variance.platesAggregated(collection); Map<Plate, Double> aggregatedResultMap = new TreeMap<Plate, Double>(); for (Plate plate : collection) { List<Double> resultList = new ArrayList<Double>(); for (Well well : plate) { resultList.addAll(well.data()); } double[] inputAggregated = new double[resultList.size()]; for (int i = 0; i < resultList.size(); i++) { inputAggregated[i] = resultList.get(i); } DescriptiveStatistics statAggregated = new DescriptiveStatistics(inputAggregated); double aggregatedResult = statAggregated.getPopulationVariance(); aggregatedResultMap.put(plate, aggregatedResult); } for (Plate plate : collection) { double result = Precision.round(aggregatedResultMap.get(plate), precision); double returned = Precision.round(aggregatedReturnedMap.get(plate), precision); assertTrue(result == returned); } }
From source file:com.github.jessemull.microflexdouble.stat.PopulationVarianceTest.java
/** * Tests the aggregated plate statistics method using an array. */// w w w.ja v a 2s. c om @Test public void testAggregatedPlateArray() { Map<Plate, Double> aggregatedReturnedMap = variance.platesAggregated(array); Map<Plate, Double> aggregatedResultMap = new TreeMap<Plate, Double>(); for (Plate plate : array) { List<Double> resultList = new ArrayList<Double>(); for (Well well : plate) { resultList.addAll(well.data()); } double[] inputAggregated = new double[resultList.size()]; for (int i = 0; i < resultList.size(); i++) { inputAggregated[i] = resultList.get(i); } DescriptiveStatistics statAggregated = new DescriptiveStatistics(inputAggregated); double aggregatedResult = statAggregated.getPopulationVariance(); aggregatedResultMap.put(plate, aggregatedResult); } for (Plate plate : array) { double result = Precision.round(aggregatedResultMap.get(plate), precision); double returned = Precision.round(aggregatedReturnedMap.get(plate), precision); assertTrue(result == returned); } }
From source file:com.github.jessemull.microflex.stat.statinteger.PopulationVarianceIntegerTest.java
/** * Tests the aggregated plate statistics method using a collection. *//*from ww w.j ava2 s. c o m*/ @Test public void testAggregatedPlateCollection() { List<PlateInteger> collection = Arrays.asList(array); Map<PlateInteger, Double> aggregatedReturnedMap = variance.platesAggregated(collection); Map<PlateInteger, Double> aggregatedResultMap = new TreeMap<PlateInteger, Double>(); for (PlateInteger plate : collection) { List<Double> resultList = new ArrayList<Double>(); for (WellInteger well : plate) { resultList.addAll(well.toDouble()); } double[] inputAggregated = new double[resultList.size()]; for (int i = 0; i < resultList.size(); i++) { inputAggregated[i] = resultList.get(i); } DescriptiveStatistics statAggregated = new DescriptiveStatistics(inputAggregated); double aggregatedResult = statAggregated.getPopulationVariance(); aggregatedResultMap.put(plate, aggregatedResult); } for (PlateInteger plate : collection) { double result = Precision.round(aggregatedResultMap.get(plate), precision); double returned = Precision.round(aggregatedReturnedMap.get(plate), precision); assertTrue(result == returned); } }
From source file:com.github.jessemull.microflex.stat.statinteger.PopulationVarianceIntegerTest.java
/** * Tests the aggregated plate statistics method using an array. *///from w w w .j av a 2 s .com @Test public void testAggregatedPlateArray() { Map<PlateInteger, Double> aggregatedReturnedMap = variance.platesAggregated(array); Map<PlateInteger, Double> aggregatedResultMap = new TreeMap<PlateInteger, Double>(); for (PlateInteger plate : array) { List<Double> resultList = new ArrayList<Double>(); for (WellInteger well : plate) { resultList.addAll(well.toDouble()); } double[] inputAggregated = new double[resultList.size()]; for (int i = 0; i < resultList.size(); i++) { inputAggregated[i] = resultList.get(i); } DescriptiveStatistics statAggregated = new DescriptiveStatistics(inputAggregated); double aggregatedResult = statAggregated.getPopulationVariance(); aggregatedResultMap.put(plate, aggregatedResult); } for (PlateInteger plate : array) { double result = Precision.round(aggregatedResultMap.get(plate), precision); double returned = Precision.round(aggregatedReturnedMap.get(plate), precision); assertTrue(result == returned); } }